AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0632930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632930 MtrunA17_Chr4g0011041 97.766 582 12 1 1 582 1 581 0.0 1160
Msa0632930 MtrunA17_Chr4g0011471 68.797 532 164 2 51 582 30 559 0.0 725
Msa0632930 MtrunA17_Chr5g0400371 46.758 586 305 4 1 582 76 658 1.17e-180 525
Msa0632930 MtrunA17_Chr4g0054891 48.307 561 284 4 23 582 96 651 1.18e-180 525
Msa0632930 MtrunA17_Chr7g0217461 46.726 565 291 4 22 580 9 569 8.52e-175 508
Msa0632930 MtrunA17_Chr7g0214461 42.650 551 307 4 32 582 73 614 2.08e-150 446
Msa0632930 MtrunA17_Chr1g0213711 41.753 582 314 6 1 582 1 557 2.81e-150 445
Msa0632930 MtrunA17_Chr7g0218851 43.038 553 304 5 32 582 41 584 7.18e-142 424
Msa0632930 MtrunA17_Chr8g0375311 37.245 588 347 8 2 580 6 580 6.23e-135 405
Msa0632930 MtrunA17_Chr8g0375351 35.556 585 364 6 1 580 4 580 7.42e-129 390
Msa0632930 MtrunA17_Chr8g0375291 37.414 580 347 8 4 576 6 576 1.61e-128 389
Msa0632930 MtrunA17_Chr8g0375341 35.495 586 363 7 1 580 4 580 1.13e-127 387
Msa0632930 MtrunA17_Chr8g0375321 34.991 583 361 8 4 580 7 577 1.47e-120 368
Msa0632930 MtrunA17_Chr7g0241741 35.336 566 344 11 23 580 8 559 1.34e-119 365
Msa0632930 MtrunA17_Chr8g0375331 35.377 571 356 6 15 580 2 564 7.45e-119 363
Msa0632930 MtrunA17_Chr8g0375361 35.813 578 356 7 8 580 12 579 2.35e-118 363
Msa0632930 MtrunA17_Chr4g0005901 35.640 578 353 10 7 579 5 568 5.63e-117 359
Msa0632930 MtrunA17_Chr3g0104011 35.875 577 343 12 13 579 1 560 1.50e-115 355
Msa0632930 MtrunA17_Chr7g0261881 33.158 570 360 8 16 577 6 562 3.42e-112 347
Msa0632930 MtrunA17_Chr7g0261811 33.450 571 357 9 16 577 6 562 7.61e-112 346
Msa0632930 MtrunA17_Chr7g0261791 34.602 578 353 10 11 577 2 565 2.68e-111 345
Msa0632930 MtrunA17_Chr7g0261771 33.045 578 363 9 11 577 2 566 7.39e-110 341
Msa0632930 MtrunA17_Chr5g0399061 34.286 560 350 8 29 579 19 569 2.44e-109 339
Msa0632930 MtrunA17_Chr1g0166791 33.392 566 354 7 23 579 10 561 1.22e-108 338
Msa0632930 MtrunA17_Chr3g0142101 32.870 575 362 9 12 581 10 565 3.37e-107 334
Msa0632930 MtrunA17_Chr1g0187241 32.007 578 364 9 15 579 2 563 7.50e-105 328
Msa0632930 MtrunA17_Chr1g0166741 31.993 547 355 7 15 558 4 536 3.73e-104 326
Msa0632930 MtrunA17_Chr7g0261851 33.276 577 364 8 11 579 2 565 6.32e-103 323
Msa0632930 MtrunA17_Chr1g0166711 32.639 576 364 7 13 579 1 561 1.15e-102 322
Msa0632930 MtrunA17_Chr3g0142091 32.517 572 366 7 14 581 3 558 5.43e-101 317
Msa0632930 MtrunA17_Chr4g0063591 36.460 565 341 11 21 580 6 557 7.55e-100 314
Msa0632930 MtrunA17_Chr5g0399071 32.086 561 361 6 29 579 17 567 1.07e-99 314
Msa0632930 MtrunA17_Chr4g0014871 32.149 563 344 9 25 579 18 550 1.31e-97 308
Msa0632930 MtrunA17_Chr1g0166771 33.006 509 325 7 58 564 12 506 1.35e-96 305
Msa0632930 MtrunA17_Chr3g0112671 30.526 570 376 8 11 579 7 557 1.35e-94 301
Msa0632930 MtrunA17_Chr3g0114501 31.690 568 360 10 23 579 8 558 1.72e-94 301
Msa0632930 MtrunA17_Chr3g0077151 33.627 568 325 11 23 579 14 540 3.73e-93 296
Msa0632930 MtrunA17_Chr4g0014791 31.261 563 346 8 25 579 17 546 5.65e-93 296
Msa0632930 MtrunA17_Chr4g0056431 32.384 562 361 10 29 579 17 570 2.48e-92 295
Msa0632930 MtrunA17_Chr4g0014841 32.286 573 343 12 22 582 14 553 1.07e-91 293
Msa0632930 MtrunA17_Chr4g0014801 31.261 563 348 9 25 579 17 548 8.09e-89 285
Msa0632930 MtrunA17_Chr4g0008651 29.553 582 391 11 1 579 1 566 1.60e-86 280
Msa0632930 MtrunA17_Chr4g0014781 31.729 561 348 9 25 579 17 548 2.67e-86 278
Msa0632930 MtrunA17_Chr7g0240381 28.957 556 377 8 25 579 17 555 3.07e-86 279
Msa0632930 MtrunA17_Chr2g0276751 31.514 568 358 10 15 579 21 560 1.05e-84 275
Msa0632930 MtrunA17_Chr3g0133341 29.696 559 362 8 33 580 10 548 1.20e-83 272
Msa0632930 MtrunA17_Chr5g0422881 29.837 553 367 7 37 579 20 561 3.03e-83 271
Msa0632930 MtrunA17_Chr7g0214731 28.546 571 379 9 28 580 51 610 1.60e-81 268
Msa0632930 MtrunA17_Chr3g0112611 26.970 571 397 8 15 579 10 566 3.14e-80 263
Msa0632930 MtrunA17_Chr7g0261751 31.365 491 294 8 11 464 2 486 4.55e-79 258
Msa0632930 MtrunA17_Chr8g0353031 29.496 556 351 11 39 580 20 548 1.03e-78 259
Msa0632930 MtrunA17_Chr1g0193391 28.929 560 376 9 25 580 3 544 2.47e-78 259
Msa0632930 MtrunA17_Chr7g0255621 28.993 576 388 9 13 580 1 563 1.06e-77 257
Msa0632930 MtrunA17_Chr1g0166731 33.548 465 285 7 124 579 9 458 2.18e-77 253
Msa0632930 MtrunA17_Chr5g0415791 29.061 554 374 8 37 579 29 574 4.22e-77 256
Msa0632930 MtrunA17_Chr2g0284701 29.809 577 375 13 25 580 19 586 5.32e-77 255
Msa0632930 MtrunA17_Chr7g0261661 33.261 460 286 8 128 579 4 450 1.49e-76 251
Msa0632930 MtrunA17_Chr5g0415961 30.442 565 378 11 25 580 12 570 2.12e-76 253
Msa0632930 MtrunA17_Chr7g0255611 29.590 561 375 10 24 575 18 567 2.21e-75 251
Msa0632930 MtrunA17_Chr7g0240271 28.877 561 390 5 24 579 11 567 2.22e-75 251
Msa0632930 MtrunA17_Chr5g0439381 29.196 572 382 6 12 580 3 554 2.59e-75 250
Msa0632930 MtrunA17_Chr7g0255601 29.725 545 365 9 41 576 31 566 2.71e-75 251
Msa0632930 MtrunA17_Chr7g0271221 29.144 549 363 9 37 580 17 544 9.12e-75 249
Msa0632930 MtrunA17_Chr4g0059981 28.253 584 390 10 19 580 3 579 1.14e-73 246
Msa0632930 MtrunA17_Chr4g0069581 29.905 525 350 7 58 580 7 515 2.16e-73 244
Msa0632930 MtrunA17_Chr8g0362781 27.500 560 386 9 33 579 26 578 1.85e-72 243
Msa0632930 MtrunA17_Chr4g0014861 32.426 441 267 10 154 582 11 432 2.33e-72 238
Msa0632930 MtrunA17_Chr8g0379971 29.642 587 377 11 25 580 8 589 1.37e-70 238
Msa0632930 MtrunA17_Chr8g0390331 29.676 556 363 13 36 579 14 553 3.20e-70 236
Msa0632930 MtrunA17_Chr4g0059991 27.886 563 380 10 36 581 21 574 1.60e-69 235
Msa0632930 MtrunA17_Chr1g0157611 29.242 554 368 12 36 579 15 554 3.26e-68 231
Msa0632930 MtrunA17_Chr8g0362711 29.663 563 382 9 26 580 13 569 1.33e-67 229
Msa0632930 MtrunA17_Chr1g0157601 27.899 552 374 12 38 579 16 553 2.78e-67 228
Msa0632930 MtrunA17_Chr4g0060001 27.051 573 405 8 15 579 2 569 1.31e-66 228
Msa0632930 MtrunA17_Chr2g0325951 28.622 566 372 11 25 580 2 545 1.53e-66 226
Msa0632930 MtrunA17_Chr4g0059971 25.299 585 419 8 5 580 7 582 2.53e-66 226
Msa0632930 MtrunA17_Chr2g0326211 27.562 566 378 11 25 580 2 545 6.46e-64 219
Msa0632930 MtrunA17_Chr1g0147631 29.295 553 366 12 41 582 29 567 3.89e-63 218
Msa0632930 MtrunA17_Chr2g0331521 27.076 554 381 13 37 579 22 563 1.21e-61 214
Msa0632930 MtrunA17_Chr7g0261731 32.113 355 224 5 13 361 4 347 1.69e-61 207
Msa0632930 MtrunA17_Chr4g0003761 26.316 589 404 13 1 579 1 569 2.16e-61 213
Msa0632930 MtrunA17_Chr8g0379991 29.144 549 330 12 81 580 24 562 8.30e-61 211
Msa0632930 MtrunA17_Chr2g0325961 28.445 566 374 10 25 580 2 546 1.23e-60 210
Msa0632930 MtrunA17_Chr1g0157621 27.032 529 359 11 62 579 5 517 1.63e-59 207
Msa0632930 MtrunA17_Chr7g0240281 26.691 547 392 5 37 577 24 567 4.30e-59 207
Msa0632930 MtrunA17_Chr8g0362801 28.448 464 319 8 125 580 1 459 1.24e-58 203
Msa0632930 MtrunA17_Chr7g0240211 29.476 458 312 7 128 579 4 456 4.77e-57 199
Msa0632930 MtrunA17_Chr7g0235521 28.884 457 316 5 128 579 4 456 5.57e-57 199
Msa0632930 MtrunA17_Chr7g0240181 29.476 458 312 7 128 579 4 456 6.77e-57 198
Msa0632930 MtrunA17_Chr3g0142111 33.007 306 201 2 14 317 23 326 8.80e-57 194
Msa0632930 MtrunA17_Chr7g0240131 29.258 458 313 7 128 579 4 456 1.56e-56 197
Msa0632930 MtrunA17_Chr2g0331471 26.585 568 391 13 27 579 73 629 9.37e-55 197
Msa0632930 MtrunA17_Chr3g0082631 27.766 461 311 7 133 579 4 456 1.14e-54 192
Msa0632930 MtrunA17_Chr2g0331481 26.391 557 387 12 33 579 23 566 3.85e-54 194
Msa0632930 MtrunA17_Chr1g0177591 26.617 541 357 15 49 579 54 564 4.41e-54 193
Msa0632930 MtrunA17_Chr6g0451841 28.364 550 352 12 44 579 12 533 1.82e-52 188
Msa0632930 MtrunA17_Chr2g0331511 24.675 539 389 10 49 579 33 562 2.25e-52 189
Msa0632930 MtrunA17_Chr7g0240151 28.821 458 297 8 128 579 4 438 2.36e-51 183
Msa0632930 MtrunA17_Chr5g0415841 27.074 458 312 10 133 580 12 457 1.81e-49 178
Msa0632930 MtrunA17_Chr1g0177611 26.424 439 300 11 147 579 14 435 2.93e-45 166
Msa0632930 MtrunA17_Chr2g0331461 25.714 560 387 14 33 579 23 566 2.96e-45 169
Msa0632930 MtrunA17_Chr3g0112631 30.935 278 173 6 310 579 3 269 7.16e-45 160
Msa0632930 MtrunA17_Chr1g0177631 26.651 439 299 13 147 579 14 435 3.68e-43 160
Msa0632930 MtrunA17_Chr3g0142121 33.818 275 160 8 311 581 11 267 1.40e-39 146
Msa0632930 MtrunA17_Chr7g0234381 28.605 430 252 13 161 579 33 418 7.03e-36 139
Msa0632930 MtrunA17_Chr7g0234181 28.176 433 244 10 164 579 31 413 9.17e-36 139
Msa0632930 MtrunA17_Chr7g0234151 28.471 425 253 12 164 579 36 418 1.07e-34 135
Msa0632930 MtrunA17_Chr4g0060071 30.894 246 163 4 340 580 53 296 5.81e-33 128
Msa0632930 MtrunA17_Chr7g0261721 35.567 194 119 3 388 577 5 196 6.98e-31 120
Msa0632930 MtrunA17_Chr7g0261671 36.207 116 71 1 11 123 3 118 2.00e-21 90.1
Msa0632930 MtrunA17_Chr3g0112651 27.749 191 127 3 124 311 21 203 3.35e-19 86.7
Msa0632930 MtrunA17_Chr1g0166721 33.333 120 76 1 13 128 1 120 1.28e-17 80.1
Msa0632930 MtrunA17_Chr4g0014851 37.374 99 62 0 25 123 18 116 1.52e-17 80.5
Msa0632930 MtrunA17_Chr4g0060061 31.356 118 81 0 147 264 6 123 3.63e-15 72.4
Msa0632930 MtrunA17_Chr1g0147591 22.500 200 145 4 166 362 9 201 1.88e-14 72.4
Msa0632930 MtrunA17_Chr7g0261831 27.451 153 97 3 268 417 3 144 3.98e-14 71.6
Msa0632930 MtrunA17_Chr2g0326221 24.034 233 149 5 349 580 16 221 1.33e-13 70.5
Msa0632930 MtrunA17_Chr3g0112661 35.354 99 64 0 25 123 19 117 9.89e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0632930 AT1G32450.1 46.769 588 293 7 4 582 8 584 1.62e-177 516
Msa0632930 AT4G21680.1 46.479 568 292 5 22 582 11 573 2.00e-165 484
Msa0632930 AT5G19640.1 40.870 575 316 7 11 582 31 584 3.15e-146 436
Msa0632930 AT2G02040.1 36.637 565 341 7 23 580 25 579 2.79e-128 389
Msa0632930 AT1G62200.1 35.094 587 361 10 1 580 13 586 2.52e-122 373
Msa0632930 AT3G54140.1 35.524 563 349 8 23 580 8 561 1.07e-118 363
Msa0632930 AT3G54140.2 35.524 563 349 8 23 580 8 561 1.07e-118 363
Msa0632930 AT5G01180.2 35.346 563 347 10 23 579 9 560 5.19e-118 362
Msa0632930 AT5G01180.3 35.346 563 347 10 23 579 9 560 5.19e-118 362
Msa0632930 AT5G01180.1 35.346 563 347 10 23 579 9 560 5.19e-118 362
Msa0632930 AT1G62200.2 33.604 616 360 11 1 580 13 615 2.49e-116 359
Msa0632930 AT1G62200.3 33.604 616 360 11 1 580 27 629 3.85e-116 358
Msa0632930 AT2G26690.1 34.336 565 358 6 18 580 3 556 2.17e-107 334
Msa0632930 AT5G46040.1 32.616 558 352 10 13 562 3 544 8.64e-105 328
Msa0632930 AT2G02020.1 32.526 578 336 8 7 579 12 540 5.03e-104 325
Msa0632930 AT5G46050.1 33.154 558 349 9 13 562 3 544 2.95e-102 321
Msa0632930 AT2G26690.3 34.549 521 328 6 62 580 2 511 6.35e-100 313
Msa0632930 AT2G26690.2 34.549 521 328 6 62 580 14 523 9.58e-100 313
Msa0632930 AT2G37900.1 30.069 582 389 9 4 582 2 568 4.76e-94 300
Msa0632930 AT1G12110.1 33.571 560 353 8 29 579 17 566 9.18e-94 299
Msa0632930 AT2G02020.2 31.315 578 322 11 7 579 12 519 2.61e-91 291
Msa0632930 AT3G53960.1 29.391 558 381 8 25 579 23 570 4.95e-89 287
Msa0632930 AT1G69870.1 30.144 554 369 9 36 580 48 592 6.60e-87 282
Msa0632930 AT1G59740.1 31.100 582 380 9 5 577 3 572 1.55e-86 280
Msa0632930 AT2G37900.2 31.412 503 328 8 82 582 2 489 1.61e-84 272
Msa0632930 AT2G40460.1 30.142 564 368 9 23 579 8 552 1.19e-83 273
Msa0632930 AT3G54450.1 29.264 557 353 8 37 579 10 539 2.08e-83 271
Msa0632930 AT1G72140.1 30.360 583 348 13 14 579 8 549 1.08e-82 269
Msa0632930 AT1G22540.1 31.786 560 347 10 27 579 18 549 3.48e-81 265
Msa0632930 AT5G13400.1 28.345 568 382 9 28 580 52 609 7.46e-79 261
Msa0632930 AT1G72130.1 31.022 548 333 11 37 579 23 530 1.62e-78 258
Msa0632930 AT1G72125.1 29.485 563 361 11 27 579 17 553 1.54e-77 256
Msa0632930 AT1G72120.1 29.255 564 357 12 27 579 17 549 1.63e-76 253
Msa0632930 AT1G68570.1 30.087 575 381 9 15 579 2 565 3.60e-76 253
Msa0632930 AT3G21670.1 30.373 563 369 8 24 580 11 556 1.54e-75 251
Msa0632930 AT1G27080.1 29.121 546 366 10 41 580 16 546 8.24e-75 249
Msa0632930 AT1G68570.2 30.855 538 354 7 52 579 6 535 1.15e-74 248
Msa0632930 AT3G16180.1 29.982 557 364 14 37 579 21 565 3.43e-74 248
Msa0632930 AT5G46050.2 32.960 446 277 8 125 562 1 432 5.37e-74 244
Msa0632930 AT1G52190.1 29.359 562 364 12 37 579 19 566 1.50e-73 246
Msa0632930 AT1G22570.1 28.648 562 364 9 11 560 2 538 2.04e-73 245
Msa0632930 AT1G33440.1 31.673 562 359 13 25 579 24 567 1.36e-72 244
Msa0632930 AT1G22550.1 28.862 589 363 10 12 579 3 556 1.49e-72 243
Msa0632930 AT1G18880.1 27.978 554 377 10 43 582 23 568 3.64e-72 242
Msa0632930 AT5G28470.2 27.788 547 385 6 36 579 14 553 1.76e-70 237
Msa0632930 AT1G27040.1 28.943 577 385 9 13 582 3 561 7.48e-70 236
Msa0632930 AT1G27040.2 29.027 565 378 8 25 582 9 557 1.49e-69 235
Msa0632930 AT5G28470.1 27.788 547 383 7 36 579 14 551 6.85e-69 233
Msa0632930 AT1G27080.2 28.516 519 350 10 68 580 1 504 8.95e-68 229
Msa0632930 AT5G14940.1 30.702 570 334 15 37 580 5 539 2.45e-67 228
Msa0632930 AT1G69850.1 28.261 598 376 10 13 580 3 577 5.45e-67 228
Msa0632930 AT5G62680.1 26.391 557 382 10 43 581 47 593 8.57e-67 229
Msa0632930 AT1G22570.2 28.210 514 332 9 59 560 13 501 6.76e-66 224
Msa0632930 AT1G27040.3 29.135 532 354 8 58 582 14 529 3.11e-65 223
Msa0632930 AT3G45710.1 26.199 542 376 9 41 580 23 542 8.60e-64 219
Msa0632930 AT3G47960.1 27.387 555 377 12 43 581 65 609 2.25e-62 217
Msa0632930 AT3G45680.1 25.853 557 388 9 25 580 8 540 6.87e-62 214
Msa0632930 AT3G45660.1 25.841 565 386 10 21 580 4 540 3.67e-61 212
Msa0632930 AT3G45660.3 25.841 565 386 10 21 580 4 540 3.67e-61 212
Msa0632930 AT5G62730.1 27.368 570 370 8 25 579 42 582 5.22e-61 213
Msa0632930 AT3G45660.2 25.841 565 386 10 21 580 25 561 8.49e-61 211
Msa0632930 AT3G01350.1 27.778 576 353 11 37 580 5 549 1.88e-59 207
Msa0632930 AT3G45720.1 24.857 523 367 9 56 576 36 534 4.39e-59 206
Msa0632930 AT3G45700.1 24.182 550 387 9 33 580 9 530 4.29e-58 204
Msa0632930 AT3G45650.1 24.735 566 394 8 20 580 3 541 8.17e-58 203
Msa0632930 AT1G72130.2 29.655 435 271 9 150 579 8 412 1.57e-56 196
Msa0632930 AT1G72130.3 29.655 435 271 9 150 579 8 412 1.57e-56 196
Msa0632930 AT5G62730.2 27.091 550 357 8 45 579 3 523 4.46e-56 197
Msa0632930 AT3G45690.1 25.627 558 347 14 27 580 4 497 4.63e-54 192
Msa0632930 AT3G45650.2 23.649 592 394 9 20 580 3 567 3.10e-52 188
Msa0632930 AT1G69860.1 25.967 543 380 10 43 580 22 547 8.96e-52 186
Msa0632930 AT3G25260.1 24.101 556 366 11 29 579 11 515 1.69e-49 179
Msa0632930 AT3G25280.1 25.668 561 357 13 29 579 11 521 8.26e-49 177
Msa0632930 AT5G11570.1 30.894 246 160 6 336 579 239 476 1.86e-26 113
Msa0632930 AT5G11570.1 25.118 211 152 3 49 257 23 229 2.16e-18 89.0
Msa0632930 AT2G38100.2 21.965 519 363 13 67 579 2 484 6.47e-26 112
Msa0632930 AT2G38100.1 21.965 519 363 13 67 579 18 500 1.33e-25 111
Msa0632930 AT2G38100.3 22.114 511 356 13 75 579 32 506 1.63e-25 110

Find 129 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTATTTCTTCTCTTTAAT+TGG 0.108015 4_3:+17362654 Msa0632930:CDS
CGCAGGAGTGGAGGCAAATT+TGG 0.185968 4_3:+17362557 Msa0632930:CDS
ACATACGAACCAGTAGATTT+AGG 0.215294 4_3:+17361206 Msa0632930:five_prime_UTR
AGATCCAAGGCCTCGATTTA+TGG 0.219705 4_3:+17364021 Msa0632930:CDS
GACATTGGGTGCTTGGATTC+TGG 0.219716 4_3:+17364115 Msa0632930:CDS
GCCTTGGATCTTTGTTCTTT+AGG 0.249631 4_3:-17364009 None:intergenic
TTATATGCCCTTGTATCTTT+TGG 0.252904 4_3:-17366322 None:intergenic
TTCATCACTTTAATGTATAA+TGG 0.262836 4_3:-17365841 None:intergenic
AAGATACAAGGGCATATAAT+TGG 0.269835 4_3:+17366326 Msa0632930:exon
TGTAGCTCACTAGGAAGTTT+TGG 0.285352 4_3:-17365871 None:intergenic
TACAGACACTATAAGACTTT+TGG 0.287136 4_3:+17364195 Msa0632930:CDS
ATTGGTTGCTGAGACTATAT+TGG 0.326940 4_3:+17364074 Msa0632930:CDS
CGAGTTCTTTGAGTATCTTT+TGG 0.338619 4_3:+17365995 Msa0632930:CDS
TCCAATTAAAGAGAAGAAAT+AGG 0.340141 4_3:-17362655 None:intergenic
CATACGAACCAGTAGATTTA+GGG 0.351552 4_3:+17361207 Msa0632930:five_prime_UTR
AAATTTCAAATACAATCAAT+TGG 0.357133 4_3:+17364270 Msa0632930:CDS
ATAATAACATTGATTGTTGC+TGG 0.357926 4_3:+17365922 Msa0632930:CDS
TAAATGATGGTCATTTAGAT+AGG 0.361054 4_3:+17366241 Msa0632930:CDS
ACCAGATGGCTTGGAAAGCT+TGG 0.361925 4_3:+17366098 Msa0632930:CDS
GGCTTGGAAAGCTTGGGAAT+GGG 0.374826 4_3:+17366105 Msa0632930:CDS
CGTCTCTTTACCATCATTGC+TGG 0.375644 4_3:-17365974 None:intergenic
ATCAATTCCTGTACAAAAGA+TGG 0.380758 4_3:+17361524 Msa0632930:CDS
GGCATTGAATTTGGGATCAT+TGG 0.384795 4_3:+17364056 Msa0632930:CDS
CCACATCGTTGTGATCAAAT+AGG 0.388694 4_3:+17363853 Msa0632930:CDS
GACCAATATCTGAGAGAAAC+AGG 0.390348 4_3:-17366655 None:intergenic
TTTCTCAGTGACTCATATCT+AGG 0.391794 4_3:+17362681 Msa0632930:CDS
TTCCTGTTTCTCTCAGATAT+TGG 0.393767 4_3:+17366653 Msa0632930:three_prime_UTR
AATTTCAAATACAATCAATT+GGG 0.408308 4_3:+17364271 Msa0632930:CDS
TGTAAGGTTGTTGAAGAAGA+GGG 0.410003 4_3:+17361497 Msa0632930:intron
TACTGGTTCGTATGTTGGTT+TGG 0.410542 4_3:-17361198 None:intergenic
AGAAGTGCCACATTGTTGTT+AGG 0.414826 4_3:+17361599 Msa0632930:CDS
CCCAAGCTTTCCAAGCCATC+TGG 0.416485 4_3:-17366099 None:intergenic
GTTGTGAAAACTTAGAGAAA+GGG 0.416740 4_3:-17364221 None:intergenic
ACTACAGGACATTGGGTGCT+TGG 0.420293 4_3:+17364108 Msa0632930:CDS
AAGATTGTGCAAAACCATAT+TGG 0.424431 4_3:-17365658 None:intergenic
TCTGCACTTGGTTGTTATGT+TGG 0.427479 4_3:+17366144 Msa0632930:CDS
AAATGACCATCATTTAGATT+AGG 0.434159 4_3:-17366234 None:intergenic
TTCTACCACGATGGTATTCA+AGG 0.435391 4_3:+17364300 Msa0632930:CDS
CAAAGTATTGGCATCGGACT+CGG 0.439489 4_3:+17365892 Msa0632930:CDS
TCAAATGCTGTCATGCTTGA+AGG 0.446123 4_3:-17365769 None:intergenic
CGTATGTTGGTTTGGTTGGT+AGG 0.448488 4_3:-17361190 None:intergenic
GCACCAAGTGTTGGTAATGC+AGG 0.448775 4_3:-17363964 None:intergenic
CTATGCATTGTTGATAAGAA+TGG 0.450469 4_3:+17361342 Msa0632930:exon
GAGCGATTAGATATATTGAT+AGG 0.450906 4_3:-17363921 None:intergenic
GTAGCCATAAATCGAGGCCT+TGG 0.453136 4_3:-17364025 None:intergenic
AGTTGTGAAAACTTAGAGAA+AGG 0.454835 4_3:-17364222 None:intergenic
AAATCTACTGGTTCGTATGT+TGG 0.456113 4_3:-17361203 None:intergenic
AGAGTGGTTTATAAGAAGGT+AGG 0.459539 4_3:-17361318 None:intergenic
CATAGAGACTACAGGACATT+GGG 0.463120 4_3:+17364101 Msa0632930:CDS
TTACTATGATGAACACAAGT+TGG 0.466550 4_3:-17362728 None:intergenic
CCAATACTTTGTAGCTCACT+AGG 0.467369 4_3:-17365880 None:intergenic
TGCAGTGGCTTTCGCAGGAG+TGG 0.468532 4_3:+17362545 Msa0632930:CDS
GTTTCACCTAATCTAAATGA+TGG 0.478316 4_3:+17366228 Msa0632930:CDS
CTTTCTCTATTTGTTGAGCA+AGG 0.480145 4_3:+17365706 Msa0632930:CDS
TAGGAGAGTGGTTTATAAGA+AGG 0.480918 4_3:-17361322 None:intergenic
TATCTAATCGCTCTAGGAAG+TGG 0.480968 4_3:+17363931 Msa0632930:CDS
TGGCTTGGAAAGCTTGGGAA+TGG 0.482071 4_3:+17366104 Msa0632930:CDS
CCAGATGGCTTGGAAAGCTT+GGG 0.487103 4_3:+17366099 Msa0632930:CDS
GTCACAAACACCAGATGGCT+TGG 0.489652 4_3:+17366089 Msa0632930:CDS
CCTAGTGAGCTACAAAGTAT+TGG 0.492143 4_3:+17365880 Msa0632930:CDS
GGTTCGTATGTTGGTTTGGT+TGG 0.492274 4_3:-17361194 None:intergenic
AGAGCTGGTATTGTTTCTGA+TGG 0.492543 4_3:+17365535 Msa0632930:CDS
CTGGTTGCAGTGGCTTTCGC+AGG 0.492804 4_3:+17362540 Msa0632930:CDS
TCAATATATCTAATCGCTCT+AGG 0.497358 4_3:+17363925 Msa0632930:CDS
GCTTGGAAAGCTTGGGAATG+GGG 0.498611 4_3:+17366106 Msa0632930:CDS
TGGTCAAGGACAACATGGTT+GGG 0.502264 4_3:+17366206 Msa0632930:CDS
GTAAGGTTGTTGAAGAAGAG+GGG 0.503830 4_3:+17361498 Msa0632930:intron
ATGTCTACAATCAGAAACTA+AGG 0.505085 4_3:-17366485 None:intergenic
GAGCTGGTATTGTTTCTGAT+GGG 0.505149 4_3:+17365536 Msa0632930:CDS
AGCTCATCCCTTTCCAAGGG+GGG 0.508148 4_3:+17366569 Msa0632930:three_prime_UTR
TTGTAAGGTTGTTGAAGAAG+AGG 0.510306 4_3:+17361496 Msa0632930:intron
AGACGAATACACCATGCAAA+TGG 0.519608 4_3:+17364339 Msa0632930:CDS
CGAACAAAATTTAGCGTCAC+AGG 0.519909 4_3:+17361372 Msa0632930:CDS
TTTATAACAAAACATGTCAA+TGG 0.520148 4_3:+17366544 Msa0632930:three_prime_UTR
GACCCTGCATTACCAACACT+TGG 0.525429 4_3:+17363961 Msa0632930:CDS
ATTCTTACATAGCATCAAGA+AGG 0.528602 4_3:+17366443 Msa0632930:three_prime_UTR
TAAATTGTGACAGTGAATCA+AGG 0.529647 4_3:+17362516 Msa0632930:intron
AGAAGACGCCCTAAATCTAC+TGG 0.532407 4_3:-17361215 None:intergenic
TGTATGTGCCAAAAGATACA+AGG 0.536921 4_3:+17366314 Msa0632930:CDS
GTGGTCAAGGACAACATGGT+TGG 0.539945 4_3:+17366205 Msa0632930:CDS
CTGAAAACTAGTTAAATATG+TGG 0.541672 4_3:-17366592 None:intergenic
TACACCATGCAAATGGCCTC+AGG 0.541676 4_3:+17364346 Msa0632930:CDS
GGCTAGCTCATCCCTTTCCA+AGG 0.544167 4_3:+17366565 Msa0632930:three_prime_UTR
ACTGAGATGTTACTAGGTAA+AGG 0.549750 4_3:+17365562 Msa0632930:CDS
AAAATTACATCAAGTGGTCA+AGG 0.554424 4_3:+17366192 Msa0632930:CDS
GTAAATAAAATTACATCAAG+TGG 0.555312 4_3:+17366186 Msa0632930:CDS
TCAATTCCTGTACAAAAGAT+GGG 0.556331 4_3:+17361525 Msa0632930:CDS
TTCACGTCACAAACACCAGA+TGG 0.561884 4_3:+17366084 Msa0632930:CDS
AAGAGAAGAAGCAAACAACT+AGG 0.563123 4_3:+17366353 Msa0632930:three_prime_UTR
ACATAGAGACTACAGGACAT+TGG 0.563249 4_3:+17364100 Msa0632930:CDS
TATATTGATAGGTAAAAGAG+TGG 0.563269 4_3:-17363910 None:intergenic
TGGATATGTACAATTTGTGC+AGG 0.566135 4_3:+17364135 Msa0632930:CDS
GGGGCAACTGAGATGTTACT+AGG 0.575317 4_3:+17365556 Msa0632930:CDS
TAGCTCATCCCTTTCCAAGG+GGG 0.579216 4_3:+17366568 Msa0632930:three_prime_UTR
AGTGGCTTTCGCAGGAGTGG+AGG 0.583063 4_3:+17362548 Msa0632930:CDS
ATTTCAAATACAATCAATTG+GGG 0.584684 4_3:+17364272 Msa0632930:CDS
CACCAAGTGTTGGTAATGCA+GGG 0.586553 4_3:-17363963 None:intergenic
TCTACCACGATGGTATTCAA+GGG 0.587469 4_3:+17364301 Msa0632930:CDS
ATCAACAATGCATAGGAGAG+TGG 0.587840 4_3:-17361334 None:intergenic
AGCTGGTATTGTTTCTGATG+GGG 0.592540 4_3:+17365537 Msa0632930:CDS
TTGGCTTACATAGAGACTAC+AGG 0.593031 4_3:+17364093 Msa0632930:CDS
GCTAGCTCATCCCTTTCCAA+GGG 0.594562 4_3:+17366566 Msa0632930:three_prime_UTR
ACCTAAAGAACAAAGATCCA+AGG 0.596150 4_3:+17364008 Msa0632930:CDS
TGATTTGATAGAATGACAAG+TGG 0.599912 4_3:+17366387 Msa0632930:three_prime_UTR
AATGCTGTCATGCTTGAAGG+AGG 0.601186 4_3:-17365766 None:intergenic
GGGGAAGATTTCTACCACGA+TGG 0.601403 4_3:+17364291 Msa0632930:CDS
GAATCAAGGACTGGTTGCAG+TGG 0.604901 4_3:+17362530 Msa0632930:CDS
ATTGAAACAAACTAATGTTG+AGG 0.605351 4_3:+17362599 Msa0632930:CDS
GCATTGTTGATAAGAATGGA+TGG 0.609229 4_3:+17361346 Msa0632930:exon
CCTATTTGATCACAACGATG+TGG 0.613251 4_3:-17363853 None:intergenic
AATTGATCAGCACCAAGTGT+TGG 0.613285 4_3:-17363973 None:intergenic
CGTACCTGAGGCCATTTGCA+TGG 0.614860 4_3:-17364350 None:intergenic
TGTTGAGCAAGGTTCTACAA+TGG 0.616288 4_3:+17365717 Msa0632930:CDS
CATTCTTATCAACAATGCAT+AGG 0.617280 4_3:-17361341 None:intergenic
GTTGGAATATAATGCAAGTG+AGG 0.617388 4_3:-17362710 None:intergenic
GAGCTACAAAGTATTGGCAT+CGG 0.622125 4_3:+17365886 Msa0632930:CDS
CTAGCTCATCCCTTTCCAAG+GGG 0.623416 4_3:+17366567 Msa0632930:three_prime_UTR
CTACCACGATGGTATTCAAG+GGG 0.625308 4_3:+17364302 Msa0632930:CDS
ATTCCTAAAAGCATATATTG+TGG 0.634005 4_3:-17366024 None:intergenic
TGTGACAGTGAATCAAGGAC+TGG 0.636123 4_3:+17362521 Msa0632930:intron
ATGCTGTCATGCTTGAAGGA+GGG 0.636585 4_3:-17365765 None:intergenic
GTATGTGCCAAAAGATACAA+GGG 0.653636 4_3:+17366315 Msa0632930:CDS
TCAAGTGGTCAAGGACAACA+TGG 0.658509 4_3:+17366201 Msa0632930:CDS
CAGTCTAACACAAAGCGAAG+CGG 0.661953 4_3:+17365612 Msa0632930:CDS
TGGTGCTGATCAATTTGATG+AGG 0.664130 4_3:+17363981 Msa0632930:CDS
CAGTTGTATGAAAACACTAG+AGG 0.679956 4_3:-17365683 None:intergenic
ATAAAAGTAGCCATAAATCG+AGG 0.682914 4_3:-17364031 None:intergenic
CATCCCCTTGAATACCATCG+TGG 0.740397 4_3:-17364305 None:intergenic
ATAGATACCTAACAACAATG+TGG 0.757923 4_3:-17361606 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTAATTGATTTGTA+AGG + chr4_3:17361481-17361500 Msa0632930:intron 10.0%
!! TAAATCATAAACATAAAAAA+GGG - chr4_3:17361639-17361658 None:intergenic 10.0%
!! ATAAATCATAAACATAAAAA+AGG - chr4_3:17361640-17361659 None:intergenic 10.0%
!!! TTAAAGAATTTTGTTTTATA+AGG - chr4_3:17365382-17365401 None:intergenic 10.0%
!! AACAAAGTCTTTATATAAAT+AGG - chr4_3:17361914-17361933 None:intergenic 15.0%
!!! AATTTCATTTTCTTCAAAAA+GGG - chr4_3:17364255-17364274 None:intergenic 15.0%
!!! AAATTTCATTTTCTTCAAAA+AGG - chr4_3:17364256-17364275 None:intergenic 15.0%
!! AAATTTCAAATACAATCAAT+TGG + chr4_3:17364270-17364289 Msa0632930:CDS 15.0%
!! AATTTCAAATACAATCAATT+GGG + chr4_3:17364271-17364290 Msa0632930:CDS 15.0%
!!! TTTTTGTAGAGAAATTTTTT+AGG - chr4_3:17364635-17364654 None:intergenic 15.0%
!!! ACTACTTTTTTTTTAGTTAA+AGG + chr4_3:17365335-17365354 Msa0632930:intron 15.0%
!! CAAAATGAATAAAGAAAATT+TGG - chr4_3:17365412-17365431 None:intergenic 15.0%
!!! TTTCTTTATTCATTTTGTTT+CGG + chr4_3:17365415-17365434 Msa0632930:intron 15.0%
!!! TTATTATATATCTTCCGTTT+TGG + chr4_3:17361741-17361760 Msa0632930:intron 20.0%
!! AAAAAATAAGTCAATCCAAA+TGG + chr4_3:17362097-17362116 Msa0632930:intron 20.0%
!! AAAAATAAGTCAATCCAAAT+GGG + chr4_3:17362098-17362117 Msa0632930:intron 20.0%
!! TATATAAGCTACTTGAATTA+TGG - chr4_3:17362124-17362143 None:intergenic 20.0%
!!! TGTTTTCAATTAAGATTACA+AGG - chr4_3:17362186-17362205 None:intergenic 20.0%
!!! GAGTTCAAAATAGTTATTTT+AGG + chr4_3:17362911-17362930 Msa0632930:intron 20.0%
!! TCATACTTTAATTAGATAAC+AGG - chr4_3:17362991-17363010 None:intergenic 20.0%
!! TCTAATTAAAGTATGATAAG+TGG + chr4_3:17362995-17363014 Msa0632930:intron 20.0%
!!! TGAATTTTATAACAAAGGAT+AGG - chr4_3:17363225-17363244 None:intergenic 20.0%
!!! ATCCTTTGTTATAAAATTCA+TGG + chr4_3:17363225-17363244 Msa0632930:intron 20.0%
!! ATTAAGTTATTGATCCTATT+AGG - chr4_3:17363255-17363274 None:intergenic 20.0%
!! ATAGGATCAATAACTTAATT+AGG + chr4_3:17363256-17363275 Msa0632930:intron 20.0%
!! ATCATAATACACTAATGATT+AGG + chr4_3:17363580-17363599 Msa0632930:intron 20.0%
!! ATTTCAAATACAATCAATTG+GGG + chr4_3:17364272-17364291 Msa0632930:CDS 20.0%
!! ATCAAATTAAAACAAGTACT+AGG + chr4_3:17364432-17364451 Msa0632930:intron 20.0%
!! TCAAATTAAAACAAGTACTA+GGG + chr4_3:17364433-17364452 Msa0632930:intron 20.0%
!! TTAAATACAAGAAAACTATG+AGG + chr4_3:17364698-17364717 Msa0632930:intron 20.0%
!!! TTCAAATTGGTTTACTATTA+CGG - chr4_3:17364748-17364767 None:intergenic 20.0%
!!! TATCAAAGCTTTTTTCAAAT+TGG - chr4_3:17364761-17364780 None:intergenic 20.0%
!!! AATTCCATTTGTATGATTTT+TGG - chr4_3:17365588-17365607 None:intergenic 20.0%
!! TTCATCACTTTAATGTATAA+TGG - chr4_3:17365844-17365863 None:intergenic 20.0%
!! GTAAATAAAATTACATCAAG+TGG + chr4_3:17366186-17366205 Msa0632930:CDS 20.0%
!! TTTATAACAAAACATGTCAA+TGG + chr4_3:17366544-17366563 Msa0632930:three_prime_UTR 20.0%
!!! CTTTCTTTCTTTGTTTTGAA+AGG - chr4_3:17361251-17361270 None:intergenic 25.0%
! CATATATACGCTAATTTATG+CGG + chr4_3:17361419-17361438 Msa0632930:intron 25.0%
! ATATATACGCTAATTTATGC+GGG + chr4_3:17361420-17361439 Msa0632930:intron 25.0%
!!! TATCAGTGTTTTTTCGATTA+CGG + chr4_3:17361657-17361676 Msa0632930:intron 25.0%
!!! TATAAAGACTTTGTTTTGCA+AGG + chr4_3:17361919-17361938 Msa0632930:intron 25.0%
! CATTATTCATAAGTTTGTCA+AGG - chr4_3:17362049-17362068 None:intergenic 25.0%
!! ATTAGCTATTCTAGAAAGTT+TGG - chr4_3:17362336-17362355 None:intergenic 25.0%
!! TCATAGATATAGGTATTGTT+TGG - chr4_3:17362454-17362473 None:intergenic 25.0%
! ATCGATATAGTCATAGATAT+AGG - chr4_3:17362464-17362483 None:intergenic 25.0%
! ATTGAAACAAACTAATGTTG+AGG + chr4_3:17362599-17362618 Msa0632930:CDS 25.0%
!! ACCTATTTCTTCTCTTTAAT+TGG + chr4_3:17362654-17362673 Msa0632930:CDS 25.0%
! TCCAATTAAAGAGAAGAAAT+AGG - chr4_3:17362658-17362677 None:intergenic 25.0%
! ATCATAGTAAGTAATCAACA+TGG + chr4_3:17362741-17362760 Msa0632930:intron 25.0%
!! TCTTTTGTTAACAGAAGTTT+AGG + chr4_3:17362840-17362859 Msa0632930:intron 25.0%
!!! GTTATTTTAGGTTACTCTTT+AGG + chr4_3:17362923-17362942 Msa0632930:intron 25.0%
! TTTAGATAAGCAAATGTTAG+TGG + chr4_3:17363040-17363059 Msa0632930:intron 25.0%
!! TGCCATGAATTTTATAACAA+AGG - chr4_3:17363230-17363249 None:intergenic 25.0%
! GTTAATGAATAATACCTTCT+TGG + chr4_3:17363287-17363306 Msa0632930:intron 25.0%
! TGTTGTTGTGTTTGATATTT+AGG + chr4_3:17363310-17363329 Msa0632930:intron 25.0%
! GTTGTTGTGTTTGATATTTA+GGG + chr4_3:17363311-17363330 Msa0632930:intron 25.0%
!!! TTGAAATTTTGGTGAAAATG+TGG - chr4_3:17363392-17363411 None:intergenic 25.0%
!! ACATTTTCACCAAAATTTCA+AGG + chr4_3:17363391-17363410 Msa0632930:intron 25.0%
!! TACTCAATACCTTGAAATTT+TGG - chr4_3:17363403-17363422 None:intergenic 25.0%
!!! ATTTCAAGGTATTGAGTATA+CGG + chr4_3:17363405-17363424 Msa0632930:intron 25.0%
! TCATTAGTGTATTATGATTC+TGG - chr4_3:17363578-17363597 None:intergenic 25.0%
! TCTTAAGCTATTCAGTATAT+GGG + chr4_3:17363641-17363660 Msa0632930:intron 25.0%
!! CTTTGCTTTCATTTTATGTA+GGG + chr4_3:17363787-17363806 Msa0632930:intron 25.0%
!! TTTGCTTTCATTTTATGTAG+GGG + chr4_3:17363788-17363807 Msa0632930:intron 25.0%
! TATATTGATAGGTAAAAGAG+TGG - chr4_3:17363913-17363932 None:intergenic 25.0%
!!! TTTTATGTGGCATTGAATTT+GGG + chr4_3:17364048-17364067 Msa0632930:CDS 25.0%
! CAAATTAAAACAAGTACTAG+GGG + chr4_3:17364434-17364453 Msa0632930:intron 25.0%
!!! TTGTAGAGAAATTTTTTAGG+CGG - chr4_3:17364632-17364651 None:intergenic 25.0%
! AAAATTGCTTTATATTCCCA+AGG + chr4_3:17364838-17364857 Msa0632930:intron 25.0%
! AGTTTACTGTTGTATAACAA+AGG + chr4_3:17365105-17365124 Msa0632930:intron 25.0%
! AAATCAACTCGATAGATATA+GGG - chr4_3:17365231-17365250 None:intergenic 25.0%
!! ATAATAACATTGATTGTTGC+TGG + chr4_3:17365922-17365941 Msa0632930:CDS 25.0%
!! ATACCACAATATATGCTTTT+AGG + chr4_3:17366021-17366040 Msa0632930:CDS 25.0%
!! ATTCCTAAAAGCATATATTG+TGG - chr4_3:17366027-17366046 None:intergenic 25.0%
! AAATGACCATCATTTAGATT+AGG - chr4_3:17366237-17366256 None:intergenic 25.0%
! TAAATGATGGTCATTTAGAT+AGG + chr4_3:17366241-17366260 Msa0632930:CDS 25.0%
! CTGAAAACTAGTTAAATATG+TGG - chr4_3:17366595-17366614 None:intergenic 25.0%
!!! TCTTTGTTTTGAAAGGATAG+AGG - chr4_3:17361244-17361263 None:intergenic 30.0%
! AGGTAGGTTTTACATATACA+CGG - chr4_3:17361305-17361324 None:intergenic 30.0%
CATTCTTATCAACAATGCAT+AGG - chr4_3:17361344-17361363 None:intergenic 30.0%
! CTATGCATTGTTGATAAGAA+TGG + chr4_3:17361342-17361361 Msa0632930:exon 30.0%
GTATATATGGTGAATCGAAT+TGG - chr4_3:17361408-17361427 None:intergenic 30.0%
CGCATAAATTAGCGTATATA+TGG - chr4_3:17361421-17361440 None:intergenic 30.0%
ATCAATTCCTGTACAAAAGA+TGG + chr4_3:17361524-17361543 Msa0632930:CDS 30.0%
TCAATTCCTGTACAAAAGAT+GGG + chr4_3:17361525-17361544 Msa0632930:CDS 30.0%
TGAAAAATAGTTCAGGTAGA+TGG + chr4_3:17361576-17361595 Msa0632930:CDS 30.0%
ATAGATACCTAACAACAATG+TGG - chr4_3:17361609-17361628 None:intergenic 30.0%
! TAAACATAAAAAAGGGTGTG+TGG - chr4_3:17361632-17361651 None:intergenic 30.0%
!!! ATCAGTGTTTTTTCGATTAC+GGG + chr4_3:17361658-17361677 Msa0632930:intron 30.0%
GTTTCATCTATCTACCAAAA+CGG - chr4_3:17361758-17361777 None:intergenic 30.0%
GCAAAAATGTCGAAATTGTT+AGG - chr4_3:17361860-17361879 None:intergenic 30.0%
GTTGAACTAGCGTATAAATA+AGG - chr4_3:17362221-17362240 None:intergenic 30.0%
ACTTATACGCTAACTTATAG+CGG - chr4_3:17362287-17362306 None:intergenic 30.0%
CTCTGTTTGGTAAAAAACAA+CGG - chr4_3:17362313-17362332 None:intergenic 30.0%
TAAATTGTGACAGTGAATCA+AGG + chr4_3:17362516-17362535 Msa0632930:intron 30.0%
! AAACACTTTTAGCATATGGA+TGG + chr4_3:17362626-17362645 Msa0632930:CDS 30.0%
! AACACTTTTAGCATATGGAT+GGG + chr4_3:17362627-17362646 Msa0632930:CDS 30.0%
TTACTATGATGAACACAAGT+TGG - chr4_3:17362731-17362750 None:intergenic 30.0%
AAATTCATGGCAAACCTAAT+AGG + chr4_3:17363238-17363257 Msa0632930:intron 30.0%
!! TTTCAAGGTATTGAGTATAC+GGG + chr4_3:17363406-17363425 Msa0632930:intron 30.0%
AAAAGAGGATAAAGTGATGT+AGG - chr4_3:17363496-17363515 None:intergenic 30.0%
CACTAATGATTAGGACAATT+AGG + chr4_3:17363589-17363608 Msa0632930:intron 30.0%
TACTGAATAGCTTAAGAGTT+TGG - chr4_3:17363638-17363657 None:intergenic 30.0%
CTCTTAAGCTATTCAGTATA+TGG + chr4_3:17363640-17363659 Msa0632930:intron 30.0%
AAATGACGCAATTATAAGAG+AGG - chr4_3:17363670-17363689 None:intergenic 30.0%
CATCATGAAATTAAAGTGAG+TGG - chr4_3:17363721-17363740 None:intergenic 30.0%
GCAAAGGAAAATAGAACTTT+AGG - chr4_3:17363773-17363792 None:intergenic 30.0%
CCTACATAAAATGAAAGCAA+AGG - chr4_3:17363789-17363808 None:intergenic 30.0%
! CCTTTGCTTTCATTTTATGT+AGG + chr4_3:17363786-17363805 Msa0632930:intron 30.0%
GAGCGATTAGATATATTGAT+AGG - chr4_3:17363924-17363943 None:intergenic 30.0%
TCAATATATCTAATCGCTCT+AGG + chr4_3:17363925-17363944 Msa0632930:CDS 30.0%
ATAAAAGTAGCCATAAATCG+AGG - chr4_3:17364034-17364053 None:intergenic 30.0%
!!! GATTTATGGCTACTTTTATG+TGG + chr4_3:17364035-17364054 Msa0632930:CDS 30.0%
!! CTTTTATGTGGCATTGAATT+TGG + chr4_3:17364047-17364066 Msa0632930:CDS 30.0%
!!! TCATTTCTTGTTTTGTTGAG+TGG + chr4_3:17364162-17364181 Msa0632930:CDS 30.0%
! TACAGACACTATAAGACTTT+TGG + chr4_3:17364195-17364214 Msa0632930:CDS 30.0%
GTTGTGAAAACTTAGAGAAA+GGG - chr4_3:17364224-17364243 None:intergenic 30.0%
AGTTGTGAAAACTTAGAGAA+AGG - chr4_3:17364225-17364244 None:intergenic 30.0%
!!! TGTAGAGAAATTTTTTAGGC+GGG - chr4_3:17364631-17364650 None:intergenic 30.0%
CTATACTTGATCAAAACACT+AGG - chr4_3:17365009-17365028 None:intergenic 30.0%
TGATATGATATTCACACTTG+AGG + chr4_3:17365029-17365048 Msa0632930:intron 30.0%
GATATGATATTCACACTTGA+GGG + chr4_3:17365030-17365049 Msa0632930:intron 30.0%
ATATGATATTCACACTTGAG+GGG + chr4_3:17365031-17365050 Msa0632930:intron 30.0%
AACTCATTCATAGTCAATGT+AGG - chr4_3:17365089-17365108 None:intergenic 30.0%
! CACATTTTCATCCAAAATCT+TGG - chr4_3:17365156-17365175 None:intergenic 30.0%
TGTTATATAACAGTGAACTC+AGG - chr4_3:17365183-17365202 None:intergenic 30.0%
CAAATCAACTCGATAGATAT+AGG - chr4_3:17365232-17365251 None:intergenic 30.0%
!! CTATATCTATCGAGTTGATT+TGG + chr4_3:17365230-17365249 Msa0632930:intron 30.0%
TATGGCTAACAAGAATACAA+TGG - chr4_3:17365284-17365303 None:intergenic 30.0%
!! TCATTGTTTTGTTGACATAC+AGG + chr4_3:17365503-17365522 Msa0632930:intron 30.0%
AAGGCCAAAAATCATACAAA+TGG + chr4_3:17365581-17365600 Msa0632930:CDS 30.0%
AAGATTGTGCAAAACCATAT+TGG - chr4_3:17365661-17365680 None:intergenic 30.0%
AAAATTACATCAAGTGGTCA+AGG + chr4_3:17366192-17366211 Msa0632930:CDS 30.0%
GTTTCACCTAATCTAAATGA+TGG + chr4_3:17366228-17366247 Msa0632930:CDS 30.0%
! TTATATGCCCTTGTATCTTT+TGG - chr4_3:17366325-17366344 None:intergenic 30.0%
! AAGATACAAGGGCATATAAT+TGG + chr4_3:17366326-17366345 Msa0632930:exon 30.0%
TGATTTGATAGAATGACAAG+TGG + chr4_3:17366387-17366406 Msa0632930:three_prime_UTR 30.0%
! AGATGTGTTTTACTCTTACA+TGG + chr4_3:17366414-17366433 Msa0632930:three_prime_UTR 30.0%
ATTCTTACATAGCATCAAGA+AGG + chr4_3:17366443-17366462 Msa0632930:three_prime_UTR 30.0%
!! AGAAGGATTGTCTTTTAGTT+TGG + chr4_3:17366460-17366479 Msa0632930:three_prime_UTR 30.0%
ATGTCTACAATCAGAAACTA+AGG - chr4_3:17366488-17366507 None:intergenic 30.0%
!! AAATCTACTGGTTCGTATGT+TGG - chr4_3:17361206-17361225 None:intergenic 35.0%
ACATACGAACCAGTAGATTT+AGG + chr4_3:17361206-17361225 Msa0632930:five_prime_UTR 35.0%
CATACGAACCAGTAGATTTA+GGG + chr4_3:17361207-17361226 Msa0632930:five_prime_UTR 35.0%
AGAGTGGTTTATAAGAAGGT+AGG - chr4_3:17361321-17361340 None:intergenic 35.0%
TAGGAGAGTGGTTTATAAGA+AGG - chr4_3:17361325-17361344 None:intergenic 35.0%
! GCATTGTTGATAAGAATGGA+TGG + chr4_3:17361346-17361365 Msa0632930:exon 35.0%
TTGTAAGGTTGTTGAAGAAG+AGG + chr4_3:17361496-17361515 Msa0632930:intron 35.0%
TGTAAGGTTGTTGAAGAAGA+GGG + chr4_3:17361497-17361516 Msa0632930:intron 35.0%
!! GATGGGTCAGTTGATTTTTA+TGG + chr4_3:17361542-17361561 Msa0632930:CDS 35.0%
!! CCTGAACTATTTTTCAAAGC+TGG - chr4_3:17361572-17361591 None:intergenic 35.0%
!! CCAGCTTTGAAAAATAGTTC+AGG + chr4_3:17361569-17361588 Msa0632930:CDS 35.0%
TTAAAACTCACACACACAAG+TGG + chr4_3:17361797-17361816 Msa0632930:intron 35.0%
! ACATTTTTGCCAATTGAGCT+AGG + chr4_3:17361870-17361889 Msa0632930:intron 35.0%
TACTTGAATTATGGCCCATT+TGG - chr4_3:17362115-17362134 None:intergenic 35.0%
! CAGCAAACACTTTTAGCATA+TGG + chr4_3:17362622-17362641 Msa0632930:CDS 35.0%
TTTCTCAGTGACTCATATCT+AGG + chr4_3:17362681-17362700 Msa0632930:CDS 35.0%
GTTGGAATATAATGCAAGTG+AGG - chr4_3:17362713-17362732 None:intergenic 35.0%
! TAGGACAAATTTTATGCCAG+TGG + chr4_3:17362942-17362961 Msa0632930:intron 35.0%
TGATATTTAGGGAGAACATC+CGG + chr4_3:17363322-17363341 Msa0632930:intron 35.0%
!! GCAACAATGGGTTAATCATT+AGG + chr4_3:17363346-17363365 Msa0632930:intron 35.0%
!! TTCAAGGTATTGAGTATACG+GGG + chr4_3:17363407-17363426 Msa0632930:intron 35.0%
!! TAGTCTTGATTCGGTTTGAT+GGG - chr4_3:17363523-17363542 None:intergenic 35.0%
!! ATAGTCTTGATTCGGTTTGA+TGG - chr4_3:17363524-17363543 None:intergenic 35.0%
! GTGGTATGATAGTCTTGATT+CGG - chr4_3:17363532-17363551 None:intergenic 35.0%
TAAGAGTTTGGATAGAGATG+TGG - chr4_3:17363626-17363645 None:intergenic 35.0%
! CTTTCATTTTATGTAGGGGT+TGG + chr4_3:17363792-17363811 Msa0632930:intron 35.0%
ACCTAAAGAACAAAGATCCA+AGG + chr4_3:17364008-17364027 Msa0632930:CDS 35.0%
ATTGGTTGCTGAGACTATAT+TGG + chr4_3:17364074-17364093 Msa0632930:CDS 35.0%
TGGATATGTACAATTTGTGC+AGG + chr4_3:17364135-17364154 Msa0632930:CDS 35.0%
GATACTAGACCAATCTACAT+TGG - chr4_3:17364460-17364479 None:intergenic 35.0%
!!! AGAAATTTTTTAGGCGGGAT+GGG - chr4_3:17364626-17364645 None:intergenic 35.0%
ATCAAAATCACCAAAAGACC+TGG - chr4_3:17364891-17364910 None:intergenic 35.0%
AAACACTAGGATTCCACTAA+CGG - chr4_3:17364996-17365015 None:intergenic 35.0%
TATGATATTCACACTTGAGG+GGG + chr4_3:17365032-17365051 Msa0632930:intron 35.0%
ATCCAAAATCTTGGAGCTTT+GGG - chr4_3:17365147-17365166 None:intergenic 35.0%
ACAACTTGCAACAGATTGTA+TGG - chr4_3:17365302-17365321 None:intergenic 35.0%
GTTAAAGGATAACAAACACG+AGG + chr4_3:17365350-17365369 Msa0632930:intron 35.0%
!! ATTTTGTTTCGGTGACATAC+AGG + chr4_3:17365426-17365445 Msa0632930:intron 35.0%
!!! ATACAGGTTTTTTAACGAGC+TGG + chr4_3:17365442-17365461 Msa0632930:intron 35.0%
!!! TACAGGTTTTTTGATAGAGC+TGG + chr4_3:17365520-17365539 Msa0632930:intron 35.0%
ACTGAGATGTTACTAGGTAA+AGG + chr4_3:17365562-17365581 Msa0632930:CDS 35.0%
!!! TTTTGAGAGTGTTGCCAATA+TGG + chr4_3:17365644-17365663 Msa0632930:CDS 35.0%
CAGTTGTATGAAAACACTAG+AGG - chr4_3:17365686-17365705 None:intergenic 35.0%
! CTTTCTCTATTTGTTGAGCA+AGG + chr4_3:17365706-17365725 Msa0632930:CDS 35.0%
!!! ATTGATTGTTGCTGGTTTTG+TGG + chr4_3:17365930-17365949 Msa0632930:CDS 35.0%
! TTAAGTTTTGCCAGCAATGA+TGG + chr4_3:17365964-17365983 Msa0632930:CDS 35.0%
! CGAGTTCTTTGAGTATCTTT+TGG + chr4_3:17365995-17366014 Msa0632930:CDS 35.0%
! TCTATGTTTTCATCTGCACT+TGG + chr4_3:17366132-17366151 Msa0632930:CDS 35.0%
TGTATGTGCCAAAAGATACA+AGG + chr4_3:17366314-17366333 Msa0632930:CDS 35.0%
GTATGTGCCAAAAGATACAA+GGG + chr4_3:17366315-17366334 Msa0632930:CDS 35.0%
AAGAGAAGAAGCAAACAACT+AGG + chr4_3:17366353-17366372 Msa0632930:three_prime_UTR 35.0%
! TTCCTGTTTCTCTCAGATAT+TGG + chr4_3:17366653-17366672 Msa0632930:three_prime_UTR 35.0%
!! TACTGGTTCGTATGTTGGTT+TGG - chr4_3:17361201-17361220 None:intergenic 40.0%
ATCAACAATGCATAGGAGAG+TGG - chr4_3:17361337-17361356 None:intergenic 40.0%
CGAACAAAATTTAGCGTCAC+AGG + chr4_3:17361372-17361391 Msa0632930:CDS 40.0%
GTAAGGTTGTTGAAGAAGAG+GGG + chr4_3:17361498-17361517 Msa0632930:intron 40.0%
! AACTGACCCATCTTTTGTAC+AGG - chr4_3:17361534-17361553 None:intergenic 40.0%
!! AGAAGTGCCACATTGTTGTT+AGG + chr4_3:17361599-17361618 Msa0632930:CDS 40.0%
! TTTTCGATTACGGGTCTGTT+TGG + chr4_3:17361667-17361686 Msa0632930:intron 40.0%
TTCGAGCACTTATGAGATTG+CGG + chr4_3:17361699-17361718 Msa0632930:intron 40.0%
GTTAGGTCAAACATTGTGAC+AGG - chr4_3:17361843-17361862 None:intergenic 40.0%
!! CTAGAAAGTTTGGCTCTGTT+TGG - chr4_3:17362326-17362345 None:intergenic 40.0%
AGTTAAGCGAGTGACATCAA+AGG - chr4_3:17363121-17363140 None:intergenic 40.0%
TGATGTCACTCGCTTAACTT+TGG + chr4_3:17363122-17363141 Msa0632930:intron 40.0%
CAAACACAACAACACCAAGA+AGG - chr4_3:17363304-17363323 None:intergenic 40.0%
TGATTAACCCATTGTTGCTC+CGG - chr4_3:17363344-17363363 None:intergenic 40.0%
TTGGTGAAAATGTGGTGTAC+AGG - chr4_3:17363384-17363403 None:intergenic 40.0%
TAAAGTGATGTAGGAGACTC+AGG - chr4_3:17363487-17363506 None:intergenic 40.0%
TGGATAGAGATGTGGTATCA+AGG - chr4_3:17363618-17363637 None:intergenic 40.0%
! AGTCCATTCCTAGTTGATGT+AGG + chr4_3:17363690-17363709 Msa0632930:intron 40.0%
GATCCTACATCAACTAGGAA+TGG - chr4_3:17363696-17363715 None:intergenic 40.0%
TGGTTGATCCTACATCAACT+AGG - chr4_3:17363701-17363720 None:intergenic 40.0%
! TCATTTTATGTAGGGGTTGG+TGG + chr4_3:17363795-17363814 Msa0632930:intron 40.0%
CCTATTTGATCACAACGATG+TGG - chr4_3:17363856-17363875 None:intergenic 40.0%
CCACATCGTTGTGATCAAAT+AGG + chr4_3:17363853-17363872 Msa0632930:CDS 40.0%
!! TATCTAATCGCTCTAGGAAG+TGG + chr4_3:17363931-17363950 Msa0632930:CDS 40.0%
AATTGATCAGCACCAAGTGT+TGG - chr4_3:17363976-17363995 None:intergenic 40.0%
!! TGGTGCTGATCAATTTGATG+AGG + chr4_3:17363981-17364000 Msa0632930:CDS 40.0%
GCCTTGGATCTTTGTTCTTT+AGG - chr4_3:17364012-17364031 None:intergenic 40.0%
! GGCATTGAATTTGGGATCAT+TGG + chr4_3:17364056-17364075 Msa0632930:CDS 40.0%
TTGGCTTACATAGAGACTAC+AGG + chr4_3:17364093-17364112 Msa0632930:CDS 40.0%
ACATAGAGACTACAGGACAT+TGG + chr4_3:17364100-17364119 Msa0632930:CDS 40.0%
CATAGAGACTACAGGACATT+GGG + chr4_3:17364101-17364120 Msa0632930:CDS 40.0%
TTCTACCACGATGGTATTCA+AGG + chr4_3:17364300-17364319 Msa0632930:CDS 40.0%
TCTACCACGATGGTATTCAA+GGG + chr4_3:17364301-17364320 Msa0632930:CDS 40.0%
AGACGAATACACCATGCAAA+TGG + chr4_3:17364339-17364358 Msa0632930:CDS 40.0%
GATTCAACTCAGATCTCACA+AGG + chr4_3:17364484-17364503 Msa0632930:intron 40.0%
AAGTTCTCACATTGGCATCT+GGG - chr4_3:17364523-17364542 None:intergenic 40.0%
TGCCAATGTGAGAACTTCAT+TGG + chr4_3:17364526-17364545 Msa0632930:intron 40.0%
! TCAATGCTATTTGAGCATCG+AGG + chr4_3:17364570-17364589 Msa0632930:intron 40.0%
!!! GAAATTTTTTAGGCGGGATG+GGG - chr4_3:17364625-17364644 None:intergenic 40.0%
!!! GAGAAATTTTTTAGGCGGGA+TGG - chr4_3:17364627-17364646 None:intergenic 40.0%
! TACGGTTAATAGCTTGTCTG+AGG - chr4_3:17364730-17364749 None:intergenic 40.0%
! TATTCCCAAGGCCTTGATTT+TGG + chr4_3:17364850-17364869 Msa0632930:intron 40.0%
! ATTCCCAAGGCCTTGATTTT+GGG + chr4_3:17364851-17364870 Msa0632930:intron 40.0%
CAAATCTCCACCCAAAATCA+AGG - chr4_3:17364864-17364883 None:intergenic 40.0%
! GATTTGATGTCCAGGTCTTT+TGG + chr4_3:17364878-17364897 Msa0632930:intron 40.0%
GGGATCACAAAAGCAACAAT+GGG - chr4_3:17364921-17364940 None:intergenic 40.0%
ACTGTTGTATAACAAAGGCG+AGG + chr4_3:17365110-17365129 Msa0632930:intron 40.0%
!! TCTTGGAGCTTTGGGAATAT+GGG - chr4_3:17365139-17365158 None:intergenic 40.0%
!! ATCTTGGAGCTTTGGGAATA+TGG - chr4_3:17365140-17365159 None:intergenic 40.0%
! TTCCCAAAGCTCCAAGATTT+TGG + chr4_3:17365142-17365161 Msa0632930:intron 40.0%
CATCCAAAATCTTGGAGCTT+TGG - chr4_3:17365148-17365167 None:intergenic 40.0%
!! AGCTGGTATTGTTTCTGATG+AGG + chr4_3:17365459-17365478 Msa0632930:intron 40.0%
!! AGAGCTGGTATTGTTTCTGA+TGG + chr4_3:17365535-17365554 Msa0632930:CDS 40.0%
!! GAGCTGGTATTGTTTCTGAT+GGG + chr4_3:17365458-17365477 Msa0632930:intron 40.0%
!! AGCTGGTATTGTTTCTGATG+GGG + chr4_3:17365459-17365478 Msa0632930:intron 40.0%
TGTTGAGCAAGGTTCTACAA+TGG + chr4_3:17365717-17365736 Msa0632930:CDS 40.0%
TCAAATGCTGTCATGCTTGA+AGG - chr4_3:17365772-17365791 None:intergenic 40.0%
! TGTAGCTCACTAGGAAGTTT+TGG - chr4_3:17365874-17365893 None:intergenic 40.0%
CCAATACTTTGTAGCTCACT+AGG - chr4_3:17365883-17365902 None:intergenic 40.0%
CCTAGTGAGCTACAAAGTAT+TGG + chr4_3:17365880-17365899 Msa0632930:CDS 40.0%
!! GAGCTACAAAGTATTGGCAT+CGG + chr4_3:17365886-17365905 Msa0632930:CDS 40.0%
TCTGCACTTGGTTGTTATGT+TGG + chr4_3:17366144-17366163 Msa0632930:CDS 40.0%
GACCAATATCTGAGAGAAAC+AGG - chr4_3:17366658-17366677 None:intergenic 40.0%
!! CGTATGTTGGTTTGGTTGGT+AGG - chr4_3:17361193-17361212 None:intergenic 45.0%
!! GGTTCGTATGTTGGTTTGGT+TGG - chr4_3:17361197-17361216 None:intergenic 45.0%
AGAAGACGCCCTAAATCTAC+TGG - chr4_3:17361218-17361237 None:intergenic 45.0%
TCGAGCACTTATGAGATTGC+GGG + chr4_3:17361700-17361719 Msa0632930:intron 45.0%
TTATGAGATTGCGGGGTTGT+TGG + chr4_3:17361708-17361727 Msa0632930:intron 45.0%
TATGAGATTGCGGGGTTGTT+GGG + chr4_3:17361709-17361728 Msa0632930:intron 45.0%
TCTGCATGTCCTAGCTCAAT+TGG - chr4_3:17361882-17361901 None:intergenic 45.0%
TGTGACAGTGAATCAAGGAC+TGG + chr4_3:17362521-17362540 Msa0632930:intron 45.0%
TTACCCCCATTCCTACCAAA+GGG + chr4_3:17362868-17362887 Msa0632930:intron 45.0%
TAAACTTGTGATGCGCCCTT+TGG - chr4_3:17362886-17362905 None:intergenic 45.0%
GAGGTGGAGAGTTCAAAACT+TGG - chr4_3:17363078-17363097 None:intergenic 45.0%
AGAACATCCGGAGCAACAAT+GGG + chr4_3:17363334-17363353 Msa0632930:intron 45.0%
ATGTGGTGTACAGGTCTCTT+AGG - chr4_3:17363375-17363394 None:intergenic 45.0%
ATTGAGTATACGGGGTGTGA+CGG + chr4_3:17363415-17363434 Msa0632930:intron 45.0%
TAGGAGACTCAGGATTGAGA+GGG - chr4_3:17363477-17363496 None:intergenic 45.0%
! GGTTTGATGGGTAGCAAAAG+AGG - chr4_3:17363511-17363530 None:intergenic 45.0%
CGCTAAAACTCTGCAACAAG+TGG - chr4_3:17363551-17363570 None:intergenic 45.0%
!! CACCAAGTGTTGGTAATGCA+GGG - chr4_3:17363966-17363985 None:intergenic 45.0%
AGATCCAAGGCCTCGATTTA+TGG + chr4_3:17364021-17364040 Msa0632930:CDS 45.0%
CTACCACGATGGTATTCAAG+GGG + chr4_3:17364302-17364321 Msa0632930:CDS 45.0%
GTTCTTAAGAGACGTACCTG+AGG - chr4_3:17364365-17364384 None:intergenic 45.0%
TACTAGGGGCCAATGTAGAT+TGG + chr4_3:17364448-17364467 Msa0632930:intron 45.0%
ACTCAGATCTCACAAGGATC+TGG + chr4_3:17364490-17364509 Msa0632930:intron 45.0%
GAAGTTCTCACATTGGCATC+TGG - chr4_3:17364524-17364543 None:intergenic 45.0%
CGCCAATGAAGTTCTCACAT+TGG - chr4_3:17364531-17364550 None:intergenic 45.0%
GGGGATCACAAAAGCAACAA+TGG - chr4_3:17364922-17364941 None:intergenic 45.0%
TGCCCACTTGTTTAGGAGTT+CGG - chr4_3:17364944-17364963 None:intergenic 45.0%
GCTATGATGCCCACTTGTTT+AGG - chr4_3:17364951-17364970 None:intergenic 45.0%
! ATCATAGCCTTGGTTCGACT+TGG + chr4_3:17364963-17364982 Msa0632930:intron 45.0%
CAGTCTAACACAAAGCGAAG+CGG + chr4_3:17365612-17365631 Msa0632930:CDS 45.0%
ATGCTGTCATGCTTGAAGGA+GGG - chr4_3:17365768-17365787 None:intergenic 45.0%
AATGCTGTCATGCTTGAAGG+AGG - chr4_3:17365769-17365788 None:intergenic 45.0%
!! AGCTCACTAGGAAGTTTTGG+AGG - chr4_3:17365871-17365890 None:intergenic 45.0%
!! CAAAGTATTGGCATCGGACT+CGG + chr4_3:17365892-17365911 Msa0632930:CDS 45.0%
CGTCTCTTTACCATCATTGC+TGG - chr4_3:17365977-17365996 None:intergenic 45.0%
TTCACGTCACAAACACCAGA+TGG + chr4_3:17366084-17366103 Msa0632930:CDS 45.0%
TCAAGTGGTCAAGGACAACA+TGG + chr4_3:17366201-17366220 Msa0632930:CDS 45.0%
TGGTCAAGGACAACATGGTT+GGG + chr4_3:17366206-17366225 Msa0632930:CDS 45.0%
CGAGCACTTATGAGATTGCG+GGG + chr4_3:17361701-17361720 Msa0632930:intron 50.0%
GTGACAGGAGTTCAAACCTC+CGG - chr4_3:17361828-17361847 None:intergenic 50.0%
!! GAATCAAGGACTGGTTGCAG+TGG + chr4_3:17362530-17362549 Msa0632930:CDS 50.0%
GTTACCCCCATTCCTACCAA+AGG + chr4_3:17362867-17362886 Msa0632930:intron 50.0%
ATGCGCCCTTTGGTAGGAAT+GGG - chr4_3:17362876-17362895 None:intergenic 50.0%
TGCCAGTGGCTCAATGCTTT+AGG + chr4_3:17362956-17362975 Msa0632930:intron 50.0%
!! CACCTAAAGCATTGAGCCAC+TGG - chr4_3:17362961-17362980 None:intergenic 50.0%
!! GTTTTGAACTCTCCACCTCC+TGG + chr4_3:17363079-17363098 Msa0632930:intron 50.0%
GAGTGACATCAAAGGAGCAG+TGG - chr4_3:17363113-17363132 None:intergenic 50.0%
GAGAACATCCGGAGCAACAA+TGG + chr4_3:17363333-17363352 Msa0632930:intron 50.0%
ACTCAGGATTGAGAGGGAGA+TGG - chr4_3:17363471-17363490 None:intergenic 50.0%
GTAGGAGACTCAGGATTGAG+AGG - chr4_3:17363478-17363497 None:intergenic 50.0%
GACCCTGCATTACCAACACT+TGG + chr4_3:17363961-17363980 Msa0632930:CDS 50.0%
!! GCACCAAGTGTTGGTAATGC+AGG - chr4_3:17363967-17363986 None:intergenic 50.0%
GTAGCCATAAATCGAGGCCT+TGG - chr4_3:17364028-17364047 None:intergenic 50.0%
ACTACAGGACATTGGGTGCT+TGG + chr4_3:17364108-17364127 Msa0632930:CDS 50.0%
GACATTGGGTGCTTGGATTC+TGG + chr4_3:17364115-17364134 Msa0632930:CDS 50.0%
GGGGAAGATTTCTACCACGA+TGG + chr4_3:17364291-17364310 Msa0632930:CDS 50.0%
CATCCCCTTGAATACCATCG+TGG - chr4_3:17364308-17364327 None:intergenic 50.0%
TACACCATGCAAATGGCCTC+AGG + chr4_3:17364346-17364365 Msa0632930:CDS 50.0%
CCACCCAAAATCAAGGCCTT+GGG - chr4_3:17364857-17364876 None:intergenic 50.0%
TCCACCCAAAATCAAGGCCT+TGG - chr4_3:17364858-17364877 None:intergenic 50.0%
TGGGTGGAGATTTGATGTCC+AGG + chr4_3:17364870-17364889 Msa0632930:intron 50.0%
CCACTTGTTTAGGAGTTCGG+GGG - chr4_3:17364941-17364960 None:intergenic 50.0%
CCCACTTGTTTAGGAGTTCG+GGG - chr4_3:17364942-17364961 None:intergenic 50.0%
CCCCGAACTCCTAAACAAGT+GGG + chr4_3:17364939-17364958 Msa0632930:intron 50.0%
GCCCACTTGTTTAGGAGTTC+GGG - chr4_3:17364943-17364962 None:intergenic 50.0%
ACAAGTGGGCATCATAGCCT+TGG + chr4_3:17364953-17364972 Msa0632930:intron 50.0%
TCTCACACCAAGTCGAACCA+AGG - chr4_3:17364973-17364992 None:intergenic 50.0%
!! ACTTGGTGTGAGACCGTTAG+TGG + chr4_3:17364980-17364999 Msa0632930:intron 50.0%
!! CACTTGAGGGGGAGTTTTGT+TGG + chr4_3:17365043-17365062 Msa0632930:intron 50.0%
GGGGCAACTGAGATGTTACT+AGG + chr4_3:17365556-17365575 Msa0632930:CDS 50.0%
GTCACAAACACCAGATGGCT+TGG + chr4_3:17366089-17366108 Msa0632930:CDS 50.0%
! ACCAGATGGCTTGGAAAGCT+TGG + chr4_3:17366098-17366117 Msa0632930:CDS 50.0%
! CCAGATGGCTTGGAAAGCTT+GGG + chr4_3:17366099-17366118 Msa0632930:CDS 50.0%
! TGGCTTGGAAAGCTTGGGAA+TGG + chr4_3:17366104-17366123 Msa0632930:CDS 50.0%
GGCTTGGAAAGCTTGGGAAT+GGG + chr4_3:17366105-17366124 Msa0632930:CDS 50.0%
GCTTGGAAAGCTTGGGAATG+GGG + chr4_3:17366106-17366125 Msa0632930:CDS 50.0%
GTGGTCAAGGACAACATGGT+TGG + chr4_3:17366205-17366224 Msa0632930:CDS 50.0%
GCTAGCTCATCCCTTTCCAA+GGG + chr4_3:17366566-17366585 Msa0632930:three_prime_UTR 50.0%
CTAGCTCATCCCTTTCCAAG+GGG + chr4_3:17366567-17366586 Msa0632930:three_prime_UTR 50.0%
TAGCTCATCCCTTTCCAAGG+GGG + chr4_3:17366568-17366587 Msa0632930:three_prime_UTR 50.0%
GTTAAATATGTGGCCCCCCT+TGG - chr4_3:17366585-17366604 None:intergenic 50.0%
ACACACACAAGTGGACGAGC+CGG + chr4_3:17361806-17361825 Msa0632930:intron 55.0%
CGCAGGAGTGGAGGCAAATT+TGG + chr4_3:17362557-17362576 Msa0632930:CDS 55.0%
TGCGCCCTTTGGTAGGAATG+GGG - chr4_3:17362875-17362894 None:intergenic 55.0%
GATGCGCCCTTTGGTAGGAA+TGG - chr4_3:17362877-17362896 None:intergenic 55.0%
CTTGTGATGCGCCCTTTGGT+AGG - chr4_3:17362882-17362901 None:intergenic 55.0%
! GTGGAGTACTAACCAGGAGG+TGG - chr4_3:17363094-17363113 None:intergenic 55.0%
! GCAGTGGAGTACTAACCAGG+AGG - chr4_3:17363097-17363116 None:intergenic 55.0%
! GGAGCAGTGGAGTACTAACC+AGG - chr4_3:17363100-17363119 None:intergenic 55.0%
CGTACCTGAGGCCATTTGCA+TGG - chr4_3:17364353-17364372 None:intergenic 55.0%
! CCCAAGGCCTTGATTTTGGG+TGG + chr4_3:17364854-17364873 Msa0632930:intron 55.0%
CCCCCGAACTCCTAAACAAG+TGG + chr4_3:17364938-17364957 Msa0632930:intron 55.0%
CCCAAGCTTTCCAAGCCATC+TGG - chr4_3:17366102-17366121 None:intergenic 55.0%
! GGCTAGCTCATCCCTTTCCA+AGG + chr4_3:17366565-17366584 Msa0632930:three_prime_UTR 55.0%
AGCTCATCCCTTTCCAAGGG+GGG + chr4_3:17366569-17366588 Msa0632930:three_prime_UTR 55.0%
TATGTGGCCCCCCTTGGAAA+GGG - chr4_3:17366579-17366598 None:intergenic 55.0%
ATATGTGGCCCCCCTTGGAA+AGG - chr4_3:17366580-17366599 None:intergenic 55.0%
CTGGTTGCAGTGGCTTTCGC+AGG + chr4_3:17362540-17362559 Msa0632930:CDS 60.0%
TGCAGTGGCTTTCGCAGGAG+TGG + chr4_3:17362545-17362564 Msa0632930:CDS 60.0%
AGTGGCTTTCGCAGGAGTGG+AGG + chr4_3:17362548-17362567 Msa0632930:CDS 60.0%
GCGCCCTTTGGTAGGAATGG+GGG - chr4_3:17362874-17362893 None:intergenic 60.0%
CTGGGGGCTCATCAGGACTA+GGG - chr4_3:17364600-17364619 None:intergenic 60.0%
TTTAGGCGGGATGGGGTCCT+GGG - chr4_3:17364618-17364637 None:intergenic 60.0%
! TTTTAGGCGGGATGGGGTCC+TGG - chr4_3:17364619-17364638 None:intergenic 60.0%
CACACAAGTGGACGAGCCGG+AGG + chr4_3:17361809-17361828 Msa0632930:intron 65.0%
CCTGGGGGCTCATCAGGACT+AGG - chr4_3:17364601-17364620 None:intergenic 65.0%
CCTAGTCCTGATGAGCCCCC+AGG + chr4_3:17364598-17364617 Msa0632930:intron 65.0%
TTAGGCGGGATGGGGTCCTG+GGG - chr4_3:17364617-17364636 None:intergenic 65.0%
TGGGGTCCTGGGGGCTCATC+AGG - chr4_3:17364607-17364626 None:intergenic 70.0%
TAGGCGGGATGGGGTCCTGG+GGG - chr4_3:17364616-17364635 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 17361178 17366687 17361178 ID=Msa0632930;Name=Msa0632930
chr4_3 mRNA 17361178 17366687 17361178 ID=Msa0632930-mRNA-1;Parent=Msa0632930;Name=Msa0632930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=183|1|1|1|1|1|5|343|582
chr4_3 exon 17361178 17361393 17361178 ID=Msa0632930-mRNA-1:exon:4880;Parent=Msa0632930-mRNA-1
chr4_3 exon 17361503 17361620 17361503 ID=Msa0632930-mRNA-1:exon:4881;Parent=Msa0632930-mRNA-1
chr4_3 exon 17362529 17362746 17362529 ID=Msa0632930-mRNA-1:exon:4882;Parent=Msa0632930-mRNA-1
chr4_3 exon 17363808 17364367 17363808 ID=Msa0632930-mRNA-1:exon:4883;Parent=Msa0632930-mRNA-1
chr4_3 exon 17365525 17366687 17365525 ID=Msa0632930-mRNA-1:exon:4884;Parent=Msa0632930-mRNA-1
chr4_3 five_prime_UTR 17361178 17361360 17361178 ID=Msa0632930-mRNA-1:five_prime_utr;Parent=Msa0632930-mRNA-1
chr4_3 CDS 17361361 17361393 17361361 ID=Msa0632930-mRNA-1:cds;Parent=Msa0632930-mRNA-1
chr4_3 CDS 17361503 17361620 17361503 ID=Msa0632930-mRNA-1:cds;Parent=Msa0632930-mRNA-1
chr4_3 CDS 17362529 17362746 17362529 ID=Msa0632930-mRNA-1:cds;Parent=Msa0632930-mRNA-1
chr4_3 CDS 17363808 17364367 17363808 ID=Msa0632930-mRNA-1:cds;Parent=Msa0632930-mRNA-1
chr4_3 CDS 17365525 17366344 17365525 ID=Msa0632930-mRNA-1:cds;Parent=Msa0632930-mRNA-1
chr4_3 three_prime_UTR 17366345 17366687 17366345 ID=Msa0632930-mRNA-1:three_prime_utr;Parent=Msa0632930-mRNA-1
Gene Sequence

>Msa0632930

ATGGATGGAAACGAACAAAATTTAGCGTCACAGGTTGTTGAAGAAGAGGGGAGTATCAATTCCTGTACAAAAGATGGGTCAGTTGATTTTTATGGAAAACCAGCTTTGAAAAATAGTTCAGGTAGATGGAGAAGTGCCACATTGTTGTTAGTGAATCAAGGACTGGTTGCAGTGGCTTTCGCAGGAGTGGAGGCAAATTTGGTTATTTTCTGCAAATTAGTATTGAAACAAACTAATGTTGAGGCAGCAAACACTTTTAGCATATGGATGGGAACTACCTATTTCTTCTCTTTAATTGGAGCTTTTCTCAGTGACTCATATCTAGGAAGATACCTCACTTGCATTATATTCCAACTTGTGTTCATCATAGGGTTGGTGGCATTATCTTTGTCAACTCACTTCTTTTTACTCAAACCACATCGTTGTGATCAAATAGGAGAGTTATGTGAATCAGATACACAAAATCAGTTTCCACTCTTTTACCTATCAATATATCTAATCGCTCTAGGAAGTGGAGTTTCTGACCCTGCATTACCAACACTTGGTGCTGATCAATTTGATGAGGAAGAACCTAAAGAACAAAGATCCAAGGCCTCGATTTATGGCTACTTTTATGTGGCATTGAATTTGGGATCATTGGTTGCTGAGACTATATTGGCTTACATAGAGACTACAGGACATTGGGTGCTTGGATTCTGGATATGTACAATTTGTGCAGGTGTTTCATTTCTTGTTTTGTTGAGTGGAACTCTTAGATACAGACACTATAAGACTTTTGGAAACCCTTTCTCTAAGTTTTCACAACTGATTGTACCCTTTTTGAAGAAAATGAAATTTCAAATACAATCAATTGGGGAAGATTTCTACCACGATGGTATTCAAGGGGATGATACTCGTGTTAGACGAATACACCATGCAAATGGCCTCAGGTTTTTTGATAGAGCTGGTATTGTTTCTGATGGGGCAACTGAGATGTTACTAGGTAAAGGCCAAAAATCATACAAATGGAATTTTAACAGTCTAACACAAAGCGAAGCGGTGACATATATTTTGAGAGTGTTGCCAATATGGTTTTGCACAATCTTCTCCTCTAGTGTTTTCATACAACTGCTTTCTCTATTTGTTGAGCAAGGTTCTACAATGGACAGAACATTTTTCAAGTTTCAGATCCCTCCTTCAAGCATGACAGCATTTGATATCATAAGCACATCAACATTTATCATATTACTCGACGTTCTTATTATTCCATTATACATTAAAGTGATGAAAAGACCTCCAAAACTTCCTAGTGAGCTACAAAGTATTGGCATCGGACTCGGCATTACAATAATAACATTGATTGTTGCTGGTTTTGTGGAGCAGAGAAGATTAAGTTTTGCCAGCAATGATGGTAAAGAGACGAGTTCTTTGAGTATCTTTTGGTTGATACCACAATATATGCTTTTAGGAATAGCAGAAGCTTTTGTGTATGTAGCACAGATGAACTTTTTCACGTCACAAACACCAGATGGCTTGGAAAGCTTGGGAATGGGGTTGTCTATGTTTTCATCTGCACTTGGTTGTTATGTTGGTAACTTTTTCTTGACTGTGGTAAATAAAATTACATCAAGTGGTCAAGGACAACATGGTTGGGTTTCACCTAATCTAAATGATGGTCATTTAGATAGGTTTTTCTTCTTGACAGCATTTCTAATTGCTATTGACATGATTGTGTATATTGTATGTGCCAAAAGATACAAGGGCATATAA
Protein sequence

>Msa0632930

MDGNEQNLASQVVEEEGSINSCTKDGSVDFYGKPALKNSSGRWRSATLLLVNQGLVAVAFAGVEANLVIFCKLVLKQTNVEAANTFSIWMGTTYFFSLIGAFLSDSYLGRYLTCIIFQLVFIIGLVALSLSTHFFLLKPHRCDQIGELCESDTQNQFPLFYLSIYLIALGSGVSDPALPTLGADQFDEEEPKEQRSKASIYGYFYVALNLGSLVAETILAYIETTGHWVLGFWICTICAGVSFLVLLSGTLRYRHYKTFGNPFSKFSQLIVPFLKKMKFQIQSIGEDFYHDGIQGDDTRVRRIHHANGLRFFDRAGIVSDGATEMLLGKGQKSYKWNFNSLTQSEAVTYILRVLPIWFCTIFSSSVFIQLLSLFVEQGSTMDRTFFKFQIPPSSMTAFDIISTSTFIILLDVLIIPLYIKVMKRPPKLPSELQSIGIGLGITIITLIVAGFVEQRRLSFASNDGKETSSLSIFWLIPQYMLLGIAEAFVYVAQMNFFTSQTPDGLESLGMGLSMFSSALGCYVGNFFLTVVNKITSSGQGQHGWVSPNLNDGHLDRFFFLTAFLIAIDMIVYIVCAKRYKGI*