Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178960 | sp|Q9SY66|FRS11_ARATH | 46.006 | 676 | 350 | 8 | 30 | 697 | 11 | 679 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178960 | A0A396JX52 | 75.510 | 735 | 179 | 1 | 31 | 764 | 16 | 750 | 0.0 | 1175 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0178960 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002720 | Msa0178960 | 0.805342 | 1.398110e-49 | -8.615850e-47 |
| Msa0006000 | Msa0178960 | 0.802561 | 5.292146e-49 | -8.615850e-47 |
| Msa0006070 | Msa0178960 | 0.810290 | 1.240336e-50 | -8.615850e-47 |
| Msa0006390 | Msa0178960 | 0.818808 | 1.615846e-52 | -8.615850e-47 |
| Msa0017510 | Msa0178960 | 0.826412 | 2.751238e-54 | -8.615850e-47 |
| Msa0018650 | Msa0178960 | 0.835042 | 2.112481e-56 | -8.615850e-47 |
| Msa0021510 | Msa0178960 | 0.804046 | 2.606323e-49 | -8.615850e-47 |
| Msa0028700 | Msa0178960 | 0.848051 | 7.841297e-60 | -8.615850e-47 |
| Msa0032330 | Msa0178960 | 0.875393 | 3.192108e-68 | -8.615850e-47 |
| Msa0062860 | Msa0178960 | 0.884781 | 1.429834e-71 | -8.615850e-47 |
| Msa0092990 | Msa0178960 | 0.808230 | 3.430337e-50 | -8.615850e-47 |
| Msa0100000 | Msa0178960 | 0.800728 | 1.257929e-48 | -8.615850e-47 |
| Msa0100090 | Msa0178960 | 0.805633 | 1.215152e-49 | -8.615850e-47 |
| Msa0101710 | Msa0178960 | 0.813885 | 2.040495e-51 | -8.615850e-47 |
| Msa0104330 | Msa0178960 | 0.821807 | 3.316947e-53 | -8.615850e-47 |
| Msa0105070 | Msa0178960 | 0.825775 | 3.900991e-54 | -8.615850e-47 |
| Msa0112590 | Msa0178960 | 0.818871 | 1.563096e-52 | -8.615850e-47 |
| Msa0114060 | Msa0178960 | 0.803191 | 3.922358e-49 | -8.615850e-47 |
| Msa0115270 | Msa0178960 | 0.840252 | 9.723782e-58 | -8.615850e-47 |
| Msa0116770 | Msa0178960 | 0.820417 | 6.935227e-53 | -8.615850e-47 |
| Msa0122590 | Msa0178960 | 0.807997 | 3.845729e-50 | -8.615850e-47 |
| Msa0157290 | Msa0178960 | 0.827054 | 1.933786e-54 | -8.615850e-47 |
| Msa0165210 | Msa0178960 | 0.827225 | 1.759400e-54 | -8.615850e-47 |
| Msa0165220 | Msa0178960 | 0.825250 | 5.193825e-54 | -8.615850e-47 |
| Msa0166870 | Msa0178960 | 0.808610 | 2.845935e-50 | -8.615850e-47 |
| Msa0170230 | Msa0178960 | 0.812881 | 3.391912e-51 | -8.615850e-47 |
| Msa0173990 | Msa0178960 | 0.810162 | 1.322000e-50 | -8.615850e-47 |
| Msa0178960 | Msa0178970 | 0.960200 | 2.736838e-118 | -8.615850e-47 |
| Msa0178960 | Msa0179280 | 0.800175 | 1.630385e-48 | -8.615850e-47 |
| Msa0178960 | Msa0180500 | 0.828858 | 7.117437e-55 | -8.615850e-47 |
| Msa0178960 | Msa0197660 | 0.806214 | 9.168915e-50 | -8.615850e-47 |
| Msa0178960 | Msa0215320 | -0.833394 | 5.470806e-56 | -8.615850e-47 |
| Msa0178960 | Msa0220580 | 0.805815 | 1.112801e-49 | -8.615850e-47 |
| Msa0178960 | Msa0220740 | 0.813431 | 2.568698e-51 | -8.615850e-47 |
| Msa0178960 | Msa0223010 | 0.809004 | 2.344710e-50 | -8.615850e-47 |
| Msa0178960 | Msa0226890 | 0.819445 | 1.157265e-52 | -8.615850e-47 |
| Msa0178960 | Msa0233300 | 0.814791 | 1.286984e-51 | -8.615850e-47 |
| Msa0178960 | Msa0239800 | 0.806809 | 6.868114e-50 | -8.615850e-47 |
| Msa0178960 | Msa0241640 | 0.815547 | 8.740760e-52 | -8.615850e-47 |
| Msa0178960 | Msa0257460 | 0.812045 | 5.165888e-51 | -8.615850e-47 |
| Msa0178960 | Msa0258760 | 0.830262 | 3.241750e-55 | -8.615850e-47 |
| Msa0178960 | Msa0262510 | 0.803737 | 3.022519e-49 | -8.615850e-47 |
| Msa0178960 | Msa0269450 | 0.810315 | 1.225560e-50 | -8.615850e-47 |
| Msa0178960 | Msa0275000 | 0.810970 | 8.845605e-51 | -8.615850e-47 |
| Msa0178960 | Msa0278110 | 0.820006 | 8.613159e-53 | -8.615850e-47 |
| Msa0178960 | Msa0279790 | 0.834768 | 2.475943e-56 | -8.615850e-47 |
| Msa0178960 | Msa0280090 | 0.809334 | 1.991596e-50 | -8.615850e-47 |
| Msa0178960 | Msa0288100 | 0.815204 | 1.042119e-51 | -8.615850e-47 |
| Msa0178960 | Msa0302580 | -0.801829 | 7.486581e-49 | -8.615850e-47 |
| Msa0178960 | Msa0317290 | 0.843720 | 1.177588e-58 | -8.615850e-47 |
| Msa0178960 | Msa0317510 | 0.806066 | 9.853540e-50 | -8.615850e-47 |
| Msa0178960 | Msa0319170 | 0.805988 | 1.023092e-49 | -8.615850e-47 |
| Msa0178960 | Msa0321310 | 0.802403 | 5.703588e-49 | -8.615850e-47 |
| Msa0178960 | Msa0323080 | 0.820598 | 6.301967e-53 | -8.615850e-47 |
| Msa0178960 | Msa0336040 | -0.800150 | 1.649182e-48 | -8.615850e-47 |
| Msa0178960 | Msa0338490 | 0.805655 | 1.201909e-49 | -8.615850e-47 |
| Msa0178960 | Msa0339620 | 0.814183 | 1.753679e-51 | -8.615850e-47 |
| Msa0178960 | Msa0340450 | 0.824697 | 7.014456e-54 | -8.615850e-47 |
| Msa0178960 | Msa0342100 | 0.806245 | 9.033069e-50 | -8.615850e-47 |
| Msa0178960 | Msa0344830 | 0.850649 | 1.481840e-60 | -8.615850e-47 |
| Msa0178960 | Msa0344910 | 0.815249 | 1.018224e-51 | -8.615850e-47 |
| Msa0178960 | Msa0344980 | 0.801679 | 8.035386e-49 | -8.615850e-47 |
| Msa0178960 | Msa0347360 | 0.807750 | 4.340235e-50 | -8.615850e-47 |
| Msa0178960 | Msa0349360 | 0.811224 | 7.789433e-51 | -8.615850e-47 |
| Msa0178960 | Msa0350990 | 0.857165 | 1.965115e-62 | -8.615850e-47 |
| Msa0178960 | Msa0351030 | 0.850872 | 1.282431e-60 | -8.615850e-47 |
| Msa0178960 | Msa0351080 | 0.815142 | 1.075597e-51 | -8.615850e-47 |
| Msa0178960 | Msa0351100 | 0.833136 | 6.342748e-56 | -8.615850e-47 |
| Msa0178960 | Msa0359030 | 0.812586 | 3.934228e-51 | -8.615850e-47 |
| Msa0178960 | Msa0369620 | 0.805590 | 1.240123e-49 | -8.615850e-47 |
| Msa0178960 | Msa0372340 | 0.804919 | 1.714485e-49 | -8.615850e-47 |
| Msa0178960 | Msa0379640 | 0.808106 | 3.644349e-50 | -8.615850e-47 |
| Msa0178960 | Msa0397750 | 0.801381 | 9.247853e-49 | -8.615850e-47 |
| Msa0178960 | Msa0398380 | 0.808254 | 3.389437e-50 | -8.615850e-47 |
| Msa0178960 | Msa0402790 | 0.803698 | 3.078556e-49 | -8.615850e-47 |
| Msa0178960 | Msa0406880 | 0.831865 | 1.310288e-55 | -8.615850e-47 |
| Msa0178960 | Msa0416300 | 0.809584 | 1.760411e-50 | -8.615850e-47 |
| Msa0178960 | Msa0416650 | 0.849123 | 3.956929e-60 | -8.615850e-47 |
| Msa0178960 | Msa0417040 | 0.805152 | 1.532448e-49 | -8.615850e-47 |
| Msa0178960 | Msa0417500 | 0.831361 | 1.743689e-55 | -8.615850e-47 |
| Msa0178960 | Msa0424320 | 0.858419 | 8.348428e-63 | -8.615850e-47 |
| Msa0178960 | Msa0431690 | 0.850355 | 1.791568e-60 | -8.615850e-47 |
| Msa0178960 | Msa0435390 | 0.814975 | 1.171413e-51 | -8.615850e-47 |
| Msa0178960 | Msa0438200 | 0.831620 | 1.505836e-55 | -8.615850e-47 |
| Msa0178960 | Msa0442850 | 0.807327 | 5.336123e-50 | -8.615850e-47 |
| Msa0178960 | Msa0458440 | 0.800299 | 1.538313e-48 | -8.615850e-47 |
| Msa0178960 | Msa0465140 | 0.811597 | 6.464241e-51 | -8.615850e-47 |
| Msa0178960 | Msa0465150 | 0.800605 | 1.332400e-48 | -8.615850e-47 |
| Msa0178960 | Msa0465200 | 0.808773 | 2.626828e-50 | -8.615850e-47 |
| Msa0178960 | Msa0466390 | 0.832682 | 8.223024e-56 | -8.615850e-47 |
| Msa0178960 | Msa0478510 | 0.801072 | 1.069966e-48 | -8.615850e-47 |
| Msa0178960 | Msa0479340 | 0.806944 | 6.432198e-50 | -8.615850e-47 |
| Msa0178960 | Msa0491220 | 0.816425 | 5.566145e-52 | -8.615850e-47 |
| Msa0178960 | Msa0493000 | 0.801775 | 7.680720e-49 | -8.615850e-47 |
| Msa0178960 | Msa0495330 | 0.816309 | 5.910597e-52 | -8.615850e-47 |
| Msa0178960 | Msa0512750 | 0.844221 | 8.647256e-59 | -8.615850e-47 |
| Msa0178960 | Msa0512900 | 0.806202 | 9.225005e-50 | -8.615850e-47 |
| Msa0178960 | Msa0516750 | 0.857959 | 1.143825e-62 | -8.615850e-47 |
| Msa0178960 | Msa0517110 | 0.806249 | 9.016450e-50 | -8.615850e-47 |
| Msa0178960 | Msa0519000 | 0.820598 | 6.303731e-53 | -8.615850e-47 |
| Msa0178960 | Msa0523940 | 0.859019 | 5.524162e-63 | -8.615850e-47 |
| Msa0178960 | Msa0524890 | -0.803016 | 4.263312e-49 | -8.615850e-47 |
| Msa0178960 | Msa0529040 | 0.809240 | 2.086873e-50 | -8.615850e-47 |
| Msa0178960 | Msa0554050 | 0.802600 | 5.193719e-49 | -8.615850e-47 |
| Msa0178960 | Msa0554740 | 0.806390 | 8.420373e-50 | -8.615850e-47 |
| Msa0178960 | Msa0562440 | 0.849323 | 3.482258e-60 | -8.615850e-47 |
| Msa0178960 | Msa0585230 | 0.817369 | 3.418105e-52 | -8.615850e-47 |
| Msa0178960 | Msa0585500 | 0.800749 | 1.245247e-48 | -8.615850e-47 |
| Msa0178960 | Msa0585700 | 0.802433 | 5.622933e-49 | -8.615850e-47 |
| Msa0178960 | Msa0592440 | 0.813054 | 3.107767e-51 | -8.615850e-47 |
| Msa0178960 | Msa0593650 | 0.808574 | 2.896453e-50 | -8.615850e-47 |
| Msa0178960 | Msa0610430 | 0.820976 | 5.158914e-53 | -8.615850e-47 |
| Msa0178960 | Msa0615740 | 0.827594 | 1.435428e-54 | -8.615850e-47 |
| Msa0178960 | Msa0621590 | 0.807819 | 4.195903e-50 | -8.615850e-47 |
| Msa0178960 | Msa0623080 | 0.818461 | 1.936660e-52 | -8.615850e-47 |
| Msa0178960 | Msa0626820 | 0.800109 | 1.681073e-48 | -8.615850e-47 |
| Msa0178960 | Msa0641670 | 0.826633 | 2.437622e-54 | -8.615850e-47 |
| Msa0178960 | Msa0647450 | -0.806327 | 8.679120e-50 | -8.615850e-47 |
| Msa0178960 | Msa0657970 | 0.805807 | 1.116683e-49 | -8.615850e-47 |
| Msa0178960 | Msa0661190 | -0.803643 | 3.161524e-49 | -8.615850e-47 |
| Msa0178960 | Msa0661650 | 0.821412 | 4.093622e-53 | -8.615850e-47 |
| Msa0178960 | Msa0661870 | 0.811287 | 7.550314e-51 | -8.615850e-47 |
| Msa0178960 | Msa0662650 | 0.812311 | 4.519554e-51 | -8.615850e-47 |
| Msa0178960 | Msa0663240 | 0.820562 | 6.424211e-53 | -8.615850e-47 |
| Msa0178960 | Msa0663380 | 0.802612 | 5.166222e-49 | -8.615850e-47 |
| Msa0178960 | Msa0663920 | 0.818112 | 2.323516e-52 | -8.615850e-47 |
| Msa0178960 | Msa0664950 | 0.807465 | 4.987368e-50 | -8.615850e-47 |
| Msa0178960 | Msa0673450 | 0.820610 | 6.262128e-53 | -8.615850e-47 |
| Msa0178960 | Msa0673460 | 0.818983 | 1.474235e-52 | -8.615850e-47 |
| Msa0178960 | Msa0688480 | 0.821845 | 3.250522e-53 | -8.615850e-47 |
| Msa0178960 | Msa0689010 | 0.806033 | 1.001056e-49 | -8.615850e-47 |
| Msa0178960 | Msa0692950 | 0.803707 | 3.065678e-49 | -8.615850e-47 |
| Msa0178960 | Msa0701010 | 0.857241 | 1.866247e-62 | -8.615850e-47 |
| Msa0178960 | Msa0708860 | 0.810751 | 9.863590e-51 | -8.615850e-47 |
| Msa0178960 | Msa0731940 | 0.806539 | 7.830363e-50 | -8.615850e-47 |
| Msa0178960 | Msa0735170 | 0.821554 | 3.795493e-53 | -8.615850e-47 |
| Msa0178960 | Msa0738500 | 0.858545 | 7.656213e-63 | -8.615850e-47 |
| Msa0178960 | Msa0743720 | 0.848792 | 4.889328e-60 | -8.615850e-47 |
| Msa0178960 | Msa0745790 | 0.806990 | 6.288666e-50 | -8.615850e-47 |
| Msa0178960 | Msa0749290 | 0.801809 | 7.558122e-49 | -8.615850e-47 |
| Msa0178960 | Msa0768290 | 0.809746 | 1.624927e-50 | -8.615850e-47 |
| Msa0178960 | Msa0768370 | 0.807314 | 5.370058e-50 | -8.615850e-47 |
| Msa0178960 | Msa0771720 | 0.831236 | 1.871886e-55 | -8.615850e-47 |
| Msa0178960 | Msa0777230 | 0.823662 | 1.227868e-53 | -8.615850e-47 |
| Msa0178960 | Msa0787470 | 0.804732 | 1.875486e-49 | -8.615850e-47 |
| Msa0178960 | Msa0794510 | -0.800257 | 1.568839e-48 | -8.615850e-47 |
| Msa0178960 | Msa0797170 | 0.825814 | 3.818372e-54 | -8.615850e-47 |
| Msa0178960 | Msa0808080 | 0.812105 | 5.011418e-51 | -8.615850e-47 |
| Msa0178960 | Msa0810220 | 0.801014 | 1.099595e-48 | -8.615850e-47 |
| Msa0178960 | Msa0820850 | 0.815368 | 9.580990e-52 | -8.615850e-47 |
| Msa0178960 | Msa0824680 | 0.802527 | 5.378204e-49 | -8.615850e-47 |
| Msa0178960 | Msa0828940 | 0.839274 | 1.748091e-57 | -8.615850e-47 |
| Msa0178960 | Msa0842650 | 0.833512 | 5.110659e-56 | -8.615850e-47 |
| Msa0178960 | Msa0849030 | 0.852961 | 3.274239e-61 | -8.615850e-47 |
| Msa0178960 | Msa0857640 | 0.832261 | 1.045954e-55 | -8.615850e-47 |
| Msa0178960 | Msa0860410 | 0.813532 | 2.440927e-51 | -8.615850e-47 |
| Msa0178960 | Msa0861130 | 0.815814 | 7.623063e-52 | -8.615850e-47 |
| Msa0178960 | Msa0868700 | 0.816214 | 6.207471e-52 | -8.615850e-47 |
| Msa0178960 | Msa0876580 | 0.805612 | 1.227571e-49 | -8.615850e-47 |
| Msa0178960 | Msa0877250 | 0.865454 | 5.839191e-65 | -8.615850e-47 |
| Msa0178960 | Msa0880140 | 0.822940 | 1.810526e-53 | -8.615850e-47 |
| Msa0178960 | Msa0882690 | 0.803739 | 3.019447e-49 | -8.615850e-47 |
| Msa0178960 | Msa0884470 | 0.804631 | 1.968652e-49 | -8.615850e-47 |
| Msa0178960 | Msa0885280 | 0.819097 | 1.389149e-52 | -8.615850e-47 |
| Msa0178960 | Msa0897330 | 0.814919 | 1.205748e-51 | -8.615850e-47 |
| Msa0178960 | Msa0907070 | 0.837600 | 4.722704e-57 | -8.615850e-47 |
| Msa0178960 | Msa0917880 | 0.916331 | 2.025538e-85 | -8.615850e-47 |
| Msa0178960 | Msa0918700 | 0.802629 | 5.124349e-49 | -8.615850e-47 |
| Msa0178960 | Msa0927380 | 0.812807 | 3.519726e-51 | -8.615850e-47 |
| Msa0178960 | Msa0930460 | -0.800962 | 1.126511e-48 | -8.615850e-47 |
| Msa0178960 | Msa0932560 | 0.802791 | 4.744138e-49 | -8.615850e-47 |
| Msa0178960 | Msa0933100 | 0.804453 | 2.144905e-49 | -8.615850e-47 |
| Msa0178960 | Msa0936300 | 0.804256 | 2.356784e-49 | -8.615850e-47 |
| Msa0178960 | Msa0938220 | 0.800677 | 1.288038e-48 | -8.615850e-47 |
| Msa0178960 | Msa0942200 | 0.803933 | 2.751028e-49 | -8.615850e-47 |
| Msa0178960 | Msa0947660 | 0.811961 | 5.387210e-51 | -8.615850e-47 |
| Msa0178960 | Msa0953120 | 0.835186 | 1.942402e-56 | -8.615850e-47 |
| Msa0178960 | Msa0958550 | 0.807164 | 5.777721e-50 | -8.615850e-47 |
| Msa0178960 | Msa0966750 | 0.818163 | 2.262703e-52 | -8.615850e-47 |
| Msa0178960 | Msa0969520 | 0.824592 | 7.426920e-54 | -8.615850e-47 |
| Msa0178960 | Msa0973100 | 0.804409 | 2.190361e-49 | -8.615850e-47 |
| Msa0178960 | Msa0974070 | 0.804077 | 2.568729e-49 | -8.615850e-47 |
| Msa0178960 | Msa0974080 | 0.807195 | 5.692072e-50 | -8.615850e-47 |
| Msa0178960 | Msa0976670 | 0.807101 | 5.959406e-50 | -8.615850e-47 |
| Msa0178960 | Msa0980090 | 0.866809 | 2.173006e-65 | -8.615850e-47 |
| Msa0178960 | Msa0983090 | 0.839141 | 1.892164e-57 | -8.615850e-47 |
| Msa0178960 | Msa0991400 | 0.801287 | 9.666423e-49 | -8.615850e-47 |
| Msa0178960 | Msa0991830 | 0.824340 | 8.512929e-54 | -8.615850e-47 |
| Msa0178960 | Msa0991930 | 0.825705 | 4.052507e-54 | -8.615850e-47 |
| Msa0178960 | Msa0993290 | 0.808819 | 2.567806e-50 | -8.615850e-47 |
| Msa0178960 | Msa0993600 | 0.815150 | 1.071272e-51 | -8.615850e-47 |
| Msa0178960 | Msa0996170 | 0.806954 | 6.401489e-50 | -8.615850e-47 |
| Msa0178960 | Msa0998690 | 0.823368 | 1.438547e-53 | -8.615850e-47 |
| Msa0178960 | Msa1000860 | 0.805599 | 1.235243e-49 | -8.615850e-47 |
| Msa0178960 | Msa1000900 | 0.815292 | 9.962169e-52 | -8.615850e-47 |
| Msa0178960 | Msa1002320 | 0.811120 | 8.208496e-51 | -8.615850e-47 |
| Msa0178960 | Msa1003620 | 0.818293 | 2.114317e-52 | -8.615850e-47 |
| Msa0178960 | Msa1014540 | 0.851881 | 6.646556e-61 | -8.615850e-47 |
| Msa0178960 | Msa1014990 | 0.830077 | 3.597123e-55 | -8.615850e-47 |
| Msa0178960 | Msa1030970 | 0.811444 | 6.978746e-51 | -8.615850e-47 |
| Msa0178960 | Msa1037420 | 0.807981 | 3.875359e-50 | -8.615850e-47 |
| Msa0178960 | Msa1039800 | 0.816646 | 4.968487e-52 | -8.615850e-47 |
| Msa0178960 | Msa1039880 | 0.803633 | 3.176753e-49 | -8.615850e-47 |
| Msa0178960 | Msa1046300 | 0.803206 | 3.893167e-49 | -8.615850e-47 |
| Msa0178960 | Msa1046460 | 0.804895 | 1.733855e-49 | -8.615850e-47 |
| Msa0178960 | Msa1075220 | -0.825271 | 5.135363e-54 | -8.615850e-47 |
| Msa0178960 | Msa1075540 | 0.807900 | 4.032664e-50 | -8.615850e-47 |
| Msa0178960 | Msa1075650 | 0.801104 | 1.053938e-48 | -8.615850e-47 |
| Msa0178960 | Msa1082500 | 0.814241 | 1.703414e-51 | -8.615850e-47 |
| Msa0178960 | Msa1082580 | 0.849741 | 2.660845e-60 | -8.615850e-47 |
| Msa0178960 | Msa1085740 | 0.866688 | 2.374833e-65 | -8.615850e-47 |
| Msa0178960 | Msa1090260 | 0.807047 | 6.118117e-50 | -8.615850e-47 |
| Msa0178960 | Msa1100050 | 0.806600 | 7.604272e-50 | -8.615850e-47 |
| Msa0178960 | Msa1107620 | 0.805846 | 1.096102e-49 | -8.615850e-47 |
| Msa0178960 | Msa1113170 | 0.805073 | 1.591688e-49 | -8.615850e-47 |
| Msa0178960 | Msa1114710 | 0.802077 | 6.656981e-49 | -8.615850e-47 |
| Msa0178960 | Msa1116130 | -0.802206 | 6.261552e-49 | -8.615850e-47 |
| Msa0178960 | Msa1121490 | 0.800323 | 1.521398e-48 | -8.615850e-47 |
| Msa0178960 | Msa1131940 | -0.812676 | 3.760290e-51 | -8.615850e-47 |
| Msa0178960 | Msa1134450 | 0.802417 | 5.667296e-49 | -8.615850e-47 |
| Msa0178960 | Msa1136090 | 0.807394 | 5.164343e-50 | -8.615850e-47 |
| Msa0178960 | Msa1137570 | 0.829858 | 4.068666e-55 | -8.615850e-47 |
| Msa0178960 | Msa1139000 | -0.802157 | 6.408457e-49 | -8.615850e-47 |
| Msa0178960 | Msa1156020 | 0.903082 | 5.008226e-79 | -8.615850e-47 |
| Msa0178960 | Msa1162550 | -0.831182 | 1.929567e-55 | -8.615850e-47 |
| Msa0178960 | Msa1165540 | 0.802852 | 4.607642e-49 | -8.615850e-47 |
| Msa0178960 | Msa1174040 | 0.837611 | 4.694209e-57 | -8.615850e-47 |
| Msa0178960 | Msa1179460 | 0.809620 | 1.729656e-50 | -8.615850e-47 |
| Msa0178960 | Msa1181550 | 0.802014 | 6.858556e-49 | -8.615850e-47 |
| Msa0178960 | Msa1182090 | 0.812347 | 4.438922e-51 | -8.615850e-47 |
| Msa0178960 | Msa1186950 | -0.801477 | 8.840899e-49 | -8.615850e-47 |
| Msa0178960 | Msa1190400 | 0.812542 | 4.024030e-51 | -8.615850e-47 |
| Msa0178960 | Msa1199220 | 0.819925 | 8.991059e-53 | -8.615850e-47 |
| Msa0178960 | Msa1205130 | 0.813470 | 2.518520e-51 | -8.615850e-47 |
| Msa0178960 | Msa1211140 | -0.807479 | 4.954801e-50 | -8.615850e-47 |
| Msa0178960 | Msa1226660 | 0.816834 | 4.508118e-52 | -8.615850e-47 |
| Msa0178960 | Msa1228590 | 0.812112 | 4.995338e-51 | -8.615850e-47 |
| Msa0178960 | Msa1233500 | 0.820382 | 7.066343e-53 | -8.615850e-47 |
| Msa0178960 | Msa1233890 | 0.842087 | 3.202878e-58 | -8.615850e-47 |
| Msa0178960 | Msa1236430 | 0.809228 | 2.098436e-50 | -8.615850e-47 |
| Msa0178960 | Msa1238930 | 0.831832 | 1.334455e-55 | -8.615850e-47 |
| Msa0178960 | Msa1239530 | 0.824516 | 7.736846e-54 | -8.615850e-47 |
| Msa0178960 | Msa1244250 | 0.861944 | 7.183532e-64 | -8.615850e-47 |
| Msa0178960 | Msa1245830 | 0.803412 | 3.528688e-49 | -8.615850e-47 |
| Msa0178960 | Msa1249490 | 0.851724 | 7.363298e-61 | -8.615850e-47 |
| Msa0178960 | Msa1252140 | 0.803423 | 3.511148e-49 | -8.615850e-47 |
| Msa0178960 | Msa1253020 | 0.807162 | 5.783558e-50 | -8.615850e-47 |
| Msa0178960 | Msa1259590 | -0.801531 | 8.617167e-49 | -8.615850e-47 |
| Msa0178960 | Msa1271210 | 0.824765 | 6.759777e-54 | -8.615850e-47 |
| Msa0178960 | Msa1275360 | 0.818350 | 2.052561e-52 | -8.615850e-47 |
| Msa0178960 | Msa1277660 | 0.837609 | 4.699665e-57 | -8.615850e-47 |
| Msa0178960 | Msa1282580 | -0.806281 | 8.879042e-50 | -8.615850e-47 |
| Msa0178960 | Msa1283860 | 0.800337 | 1.511159e-48 | -8.615850e-47 |
| Msa0178960 | Msa1284680 | 0.857210 | 1.905616e-62 | -8.615850e-47 |
| Msa0178960 | Msa1297210 | 0.800223 | 1.594215e-48 | -8.615850e-47 |
| Msa0178960 | Msa1299290 | -0.802764 | 4.806547e-49 | -8.615850e-47 |
| Msa0178960 | Msa1306760 | 0.805237 | 1.470506e-49 | -8.615850e-47 |
| Msa0178960 | Msa1306850 | 0.805931 | 1.051945e-49 | -8.615850e-47 |
| Msa0178960 | Msa1336670 | 0.821866 | 3.215491e-53 | -8.615850e-47 |
| Msa0178960 | Msa1348950 | 0.847101 | 1.431092e-59 | -8.615850e-47 |
| Msa0178960 | Msa1351620 | 0.812949 | 3.277968e-51 | -8.615850e-47 |
| Msa0178960 | Msa1359040 | 0.807328 | 5.333866e-50 | -8.615850e-47 |
| Msa0178960 | Msa1362880 | 0.851185 | 1.046284e-60 | -8.615850e-47 |
| Msa0178960 | Msa1366810 | 0.805801 | 1.119965e-49 | -8.615850e-47 |
| Msa0178960 | Msa1369530 | 0.835523 | 1.597235e-56 | -8.615850e-47 |
| Msa0178960 | Msa1372760 | 0.805339 | 1.400136e-49 | -8.615850e-47 |
| Msa0178960 | Msa1394730 | 0.831116 | 2.002586e-55 | -8.615850e-47 |
| Msa0178960 | Msa1402790 | 0.801050 | 1.081232e-48 | -8.615850e-47 |
| Msa0178960 | Msa1403480 | 0.800394 | 1.471397e-48 | -8.615850e-47 |
| Msa0178960 | Msa1411020 | 0.821922 | 3.120729e-53 | -8.615850e-47 |
| Msa0178960 | Msa1420490 | 0.807117 | 5.910530e-50 | -8.615850e-47 |
| Msa0178960 | Msa1423390 | 0.807263 | 5.505628e-50 | -8.615850e-47 |
| Msa0178960 | Msa1424290 | 0.817379 | 3.400329e-52 | -8.615850e-47 |
| Msa0178960 | Msa1427230 | 0.827960 | 1.171799e-54 | -8.615850e-47 |
| Msa0178960 | Msa1434350 | 0.819461 | 1.147527e-52 | -8.615850e-47 |
| Msa0178960 | Msa1439320 | 0.823349 | 1.452740e-53 | -8.615850e-47 |
| Msa0178960 | Msa1440370 | 0.806757 | 7.043384e-50 | -8.615850e-47 |
| Msa0178960 | Msa1440810 | 0.807227 | 5.603749e-50 | -8.615850e-47 |
| Msa0178960 | Msa1441190 | 0.812914 | 3.335023e-51 | -8.615850e-47 |
| Msa0178960 | Msa1451620 | -0.830343 | 3.097622e-55 | -8.615850e-47 |
| Msa0178960 | Msa1452240 | 0.800301 | 1.536937e-48 | -8.615850e-47 |
| Msa0178960 | Msa1455490 | 0.813886 | 2.039213e-51 | -8.615850e-47 |
| Msa0178960 | Msa1460830 | 0.829812 | 4.175478e-55 | -8.615850e-47 |
| Msa0178960 | Msa1464940 | 0.812753 | 3.617392e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178960 | MtrunA17_Chr1g0198761 | 75.510 | 735 | 179 | 1 | 31 | 764 | 16 | 750 | 0.0 | 1175 |
| Msa0178960 | MtrunA17_Chr5g0431001 | 91.909 | 482 | 39 | 0 | 1 | 482 | 1 | 482 | 0.0 | 932 |
| Msa0178960 | MtrunA17_Chr2g0276841 | 47.680 | 625 | 316 | 5 | 60 | 681 | 69 | 685 | 0.0 | 629 |
| Msa0178960 | MtrunA17_Chr2g0294841 | 42.454 | 709 | 380 | 7 | 60 | 747 | 44 | 745 | 0.0 | 605 |
| Msa0178960 | MtrunA17_Chr2g0290391 | 46.034 | 643 | 310 | 8 | 61 | 683 | 51 | 676 | 0.0 | 574 |
| Msa0178960 | MtrunA17_Chr1g0202341 | 29.472 | 682 | 442 | 15 | 13 | 677 | 10 | 669 | 1.48e-85 | 285 |
| Msa0178960 | MtrunA17_Chr5g0448761 | 31.293 | 588 | 380 | 9 | 61 | 634 | 60 | 637 | 4.43e-82 | 278 |
| Msa0178960 | MtrunA17_Chr3g0080351 | 30.494 | 587 | 350 | 18 | 61 | 627 | 76 | 624 | 6.84e-76 | 263 |
| Msa0178960 | MtrunA17_Chr2g0296781 | 28.905 | 685 | 430 | 20 | 67 | 724 | 3 | 657 | 1.09e-75 | 259 |
| Msa0178960 | MtrunA17_Chr2g0329031 | 27.273 | 682 | 446 | 16 | 67 | 734 | 20 | 665 | 1.84e-71 | 248 |
| Msa0178960 | MtrunA17_Chr6g0477261 | 31.091 | 550 | 341 | 15 | 194 | 718 | 4 | 540 | 1.77e-69 | 241 |
| Msa0178960 | MtrunA17_Chr6g0458391 | 27.778 | 576 | 379 | 11 | 58 | 627 | 222 | 766 | 8.95e-68 | 238 |
| Msa0178960 | MtrunA17_Chr8g0363841 | 26.677 | 671 | 439 | 16 | 62 | 699 | 18 | 668 | 1.96e-67 | 236 |
| Msa0178960 | MtrunA17_Chr1g0203051 | 27.273 | 605 | 386 | 14 | 28 | 613 | 52 | 621 | 1.56e-66 | 233 |
| Msa0178960 | MtrunA17_Chr1g0207551 | 29.340 | 576 | 379 | 12 | 61 | 627 | 34 | 590 | 2.10e-66 | 236 |
| Msa0178960 | MtrunA17_Chr5g0441581 | 28.675 | 551 | 359 | 13 | 86 | 623 | 51 | 580 | 8.82e-66 | 231 |
| Msa0178960 | MtrunA17_Chr2g0287651 | 28.034 | 585 | 388 | 13 | 53 | 625 | 68 | 631 | 1.38e-65 | 234 |
| Msa0178960 | MtrunA17_Chr3g0082121 | 29.776 | 581 | 364 | 17 | 60 | 627 | 42 | 591 | 8.25e-64 | 226 |
| Msa0178960 | MtrunA17_Chr5g0440451 | 25.680 | 662 | 430 | 15 | 61 | 695 | 43 | 669 | 3.32e-62 | 225 |
| Msa0178960 | MtrunA17_Chr2g0287061 | 26.935 | 646 | 382 | 17 | 40 | 671 | 165 | 734 | 5.27e-61 | 220 |
| Msa0178960 | MtrunA17_Chr1g0203721 | 26.506 | 581 | 388 | 12 | 64 | 627 | 66 | 624 | 5.11e-60 | 218 |
| Msa0178960 | MtrunA17_Chr2g0324011 | 26.724 | 580 | 388 | 10 | 61 | 625 | 10 | 567 | 1.19e-56 | 204 |
| Msa0178960 | MtrunA17_Chr5g0448511 | 30.952 | 378 | 255 | 3 | 249 | 621 | 16 | 392 | 1.67e-56 | 202 |
| Msa0178960 | MtrunA17_Chr1g0196541 | 26.817 | 578 | 375 | 14 | 67 | 623 | 3 | 553 | 1.80e-56 | 206 |
| Msa0178960 | MtrunA17_Chr3g0118611 | 29.481 | 424 | 288 | 7 | 203 | 621 | 79 | 496 | 1.98e-53 | 198 |
| Msa0178960 | MtrunA17_Chr2g0291581 | 25.764 | 687 | 429 | 17 | 38 | 685 | 43 | 687 | 5.38e-53 | 195 |
| Msa0178960 | MtrunA17_Chr5g0430921 | 97.647 | 85 | 2 | 0 | 680 | 764 | 1 | 85 | 1.06e-52 | 177 |
| Msa0178960 | MtrunA17_Chr3g0081281 | 86.957 | 92 | 12 | 0 | 210 | 301 | 2 | 93 | 3.12e-48 | 165 |
| Msa0178960 | MtrunA17_Chr2g0291591 | 24.296 | 568 | 373 | 14 | 20 | 565 | 25 | 557 | 1.62e-39 | 154 |
| Msa0178960 | MtrunA17_Chr1g0164591 | 34.314 | 204 | 132 | 2 | 262 | 464 | 106 | 308 | 2.23e-35 | 137 |
| Msa0178960 | MtrunA17_Chr7g0258861 | 25.338 | 296 | 195 | 6 | 61 | 347 | 10 | 288 | 1.78e-20 | 93.2 |
| Msa0178960 | MtrunA17_Chr2g0308841 | 26.407 | 231 | 160 | 5 | 418 | 643 | 14 | 239 | 8.23e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178960 | AT1G10240.2 | 46.006 | 676 | 350 | 8 | 30 | 697 | 11 | 679 | 0.0 | 624 |
| Msa0178960 | AT1G10240.1 | 46.006 | 676 | 350 | 8 | 30 | 697 | 11 | 679 | 0.0 | 624 |
| Msa0178960 | AT5G28530.3 | 42.185 | 659 | 355 | 6 | 31 | 678 | 27 | 670 | 0.0 | 553 |
| Msa0178960 | AT5G28530.2 | 42.185 | 659 | 355 | 6 | 31 | 678 | 27 | 670 | 0.0 | 553 |
| Msa0178960 | AT5G28530.1 | 42.033 | 659 | 360 | 6 | 31 | 678 | 27 | 674 | 0.0 | 551 |
| Msa0178960 | AT5G28530.5 | 38.367 | 649 | 331 | 8 | 31 | 678 | 27 | 607 | 3.72e-152 | 458 |
| Msa0178960 | AT5G28530.4 | 38.213 | 649 | 336 | 8 | 31 | 678 | 27 | 611 | 1.18e-151 | 457 |
| Msa0178960 | AT4G38180.1 | 31.993 | 572 | 371 | 7 | 61 | 625 | 73 | 633 | 1.22e-85 | 288 |
| Msa0178960 | AT4G15090.1 | 28.447 | 689 | 447 | 17 | 61 | 727 | 51 | 715 | 1.80e-81 | 278 |
| Msa0178960 | AT4G15090.5 | 28.447 | 689 | 447 | 17 | 61 | 727 | 51 | 715 | 1.80e-81 | 278 |
| Msa0178960 | AT4G15090.3 | 28.447 | 689 | 447 | 17 | 61 | 727 | 51 | 715 | 1.80e-81 | 278 |
| Msa0178960 | AT4G15090.2 | 28.447 | 689 | 447 | 17 | 61 | 727 | 51 | 715 | 1.80e-81 | 278 |
| Msa0178960 | AT4G15090.4 | 28.447 | 689 | 447 | 17 | 61 | 727 | 51 | 715 | 1.80e-81 | 278 |
| Msa0178960 | AT1G76320.3 | 27.986 | 561 | 374 | 12 | 67 | 621 | 3 | 539 | 9.92e-66 | 231 |
| Msa0178960 | AT1G76320.2 | 27.986 | 561 | 374 | 12 | 67 | 621 | 3 | 539 | 1.02e-65 | 233 |
| Msa0178960 | AT1G76320.1 | 27.986 | 561 | 374 | 12 | 67 | 621 | 3 | 539 | 1.08e-65 | 233 |
| Msa0178960 | AT1G76320.4 | 27.986 | 561 | 374 | 12 | 67 | 621 | 3 | 539 | 1.08e-65 | 233 |
| Msa0178960 | AT3G22170.2 | 26.791 | 642 | 402 | 21 | 61 | 679 | 70 | 666 | 3.68e-65 | 233 |
| Msa0178960 | AT3G22170.1 | 26.791 | 642 | 402 | 21 | 61 | 679 | 70 | 666 | 3.68e-65 | 233 |
| Msa0178960 | AT3G06250.2 | 26.087 | 575 | 358 | 12 | 61 | 627 | 190 | 705 | 1.16e-57 | 210 |
| Msa0178960 | AT3G06250.1 | 26.087 | 575 | 358 | 12 | 61 | 627 | 190 | 705 | 1.16e-57 | 210 |
| Msa0178960 | AT3G06250.3 | 26.087 | 575 | 358 | 12 | 61 | 627 | 190 | 705 | 1.16e-57 | 210 |
| Msa0178960 | AT2G27110.2 | 26.485 | 623 | 404 | 17 | 61 | 675 | 49 | 625 | 1.72e-56 | 208 |
| Msa0178960 | AT2G27110.1 | 26.485 | 623 | 404 | 17 | 61 | 675 | 49 | 625 | 1.72e-56 | 208 |
| Msa0178960 | AT5G18960.2 | 26.079 | 579 | 356 | 13 | 61 | 627 | 211 | 729 | 4.91e-56 | 206 |
| Msa0178960 | AT5G18960.1 | 26.079 | 579 | 356 | 13 | 61 | 627 | 211 | 729 | 4.91e-56 | 206 |
| Msa0178960 | AT2G27110.3 | 29.505 | 444 | 294 | 11 | 240 | 675 | 48 | 480 | 9.40e-54 | 198 |
| Msa0178960 | AT2G32250.8 | 23.810 | 630 | 413 | 13 | 67 | 691 | 3 | 570 | 1.03e-50 | 190 |
| Msa0178960 | AT2G32250.7 | 23.810 | 630 | 413 | 13 | 67 | 691 | 3 | 570 | 1.27e-50 | 190 |
| Msa0178960 | AT4G38170.1 | 30.513 | 390 | 260 | 6 | 244 | 627 | 16 | 400 | 2.74e-49 | 182 |
| Msa0178960 | AT2G32250.5 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 3.55e-48 | 183 |
| Msa0178960 | AT2G32250.6 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 6.96e-48 | 182 |
| Msa0178960 | AT2G32250.1 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 6.96e-48 | 182 |
| Msa0178960 | AT2G32250.3 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 6.96e-48 | 182 |
| Msa0178960 | AT2G32250.2 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 7.46e-48 | 182 |
| Msa0178960 | AT2G32250.4 | 25.455 | 440 | 316 | 5 | 256 | 691 | 180 | 611 | 7.46e-48 | 182 |
| Msa0178960 | AT4G19990.5 | 26.621 | 586 | 357 | 17 | 63 | 625 | 23 | 558 | 2.58e-47 | 180 |
| Msa0178960 | AT4G19990.3 | 26.621 | 586 | 357 | 17 | 63 | 625 | 23 | 558 | 2.78e-47 | 180 |
| Msa0178960 | AT4G19990.4 | 26.621 | 586 | 357 | 17 | 63 | 625 | 23 | 558 | 2.78e-47 | 180 |
| Msa0178960 | AT4G19990.7 | 26.621 | 586 | 357 | 17 | 63 | 625 | 37 | 572 | 2.82e-47 | 180 |
| Msa0178960 | AT4G19990.6 | 26.621 | 586 | 357 | 17 | 63 | 625 | 23 | 558 | 3.30e-47 | 180 |
| Msa0178960 | AT4G19990.2 | 26.621 | 586 | 357 | 17 | 63 | 625 | 23 | 558 | 3.30e-47 | 180 |
| Msa0178960 | AT1G52520.1 | 26.801 | 597 | 359 | 22 | 61 | 624 | 85 | 636 | 7.05e-46 | 175 |
| Msa0178960 | AT4G19990.1 | 25.933 | 536 | 332 | 14 | 112 | 625 | 9 | 501 | 4.91e-43 | 167 |
| Msa0178960 | AT1G80010.1 | 24.715 | 615 | 362 | 21 | 61 | 624 | 95 | 659 | 3.99e-41 | 161 |
| Msa0178960 | AT3G59470.3 | 36.283 | 113 | 61 | 4 | 61 | 173 | 70 | 171 | 5.19e-11 | 64.3 |
| Msa0178960 | AT3G59470.1 | 36.283 | 113 | 61 | 4 | 61 | 173 | 70 | 171 | 5.19e-11 | 64.3 |
| Msa0178960 | AT3G59470.2 | 36.283 | 113 | 61 | 4 | 61 | 173 | 82 | 183 | 6.28e-11 | 64.3 |
Find 130 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTACATGACTAGATTT+TGG | 0.131548 | 1_4:-66390280 | None:intergenic |
| TCTTTACCCATCGTAAATTT+TGG | 0.158198 | 1_4:+66389647 | Msa0178960:CDS |
| ATGAGATGCCTCTTGGAATA+TGG | 0.196486 | 1_4:+66389146 | Msa0178960:CDS |
| TTCTCACAACCACGAGTTAT+TGG | 0.199264 | 1_4:+66388724 | Msa0178960:CDS |
| TCGAATTAGAGACTGAAATT+TGG | 0.209475 | 1_4:-66390323 | None:intergenic |
| ATCACATGTTCTTGAGTTTC+AGG | 0.210618 | 1_4:-66390436 | None:intergenic |
| AACGTCACAGTCATCATTAT+TGG | 0.232373 | 1_4:-66390479 | None:intergenic |
| ACAGTTTGATCAAAACTATT+TGG | 0.236534 | 1_4:-66390830 | None:intergenic |
| CTCATGTTGAAGCAACTTAA+AGG | 0.248230 | 1_4:-66390002 | None:intergenic |
| CCAATTAAAACACACTTATT+AGG | 0.249451 | 1_4:-66390679 | None:intergenic |
| TGTTTATTTGCAAAACAAAA+TGG | 0.260407 | 1_4:+66388458 | Msa0178960:CDS |
| AAAATCTGTCAAACTTGTTT+TGG | 0.261322 | 1_4:-66389764 | None:intergenic |
| TTCCTTCGCATGGGCTATAA+AGG | 0.299718 | 1_4:+66389237 | Msa0178960:CDS |
| ATTCGCGCATATGAAGCTTT+TGG | 0.302502 | 1_4:+66389082 | Msa0178960:CDS |
| AATATCATCATAAAGATAAA+AGG | 0.310779 | 1_4:+66390409 | Msa0178960:CDS |
| TCAAGAACATGTGATTGATT+TGG | 0.314506 | 1_4:+66390444 | Msa0178960:CDS |
| GCAGCTTCAACCCCTCCTTT+TGG | 0.339248 | 1_4:-66390550 | None:intergenic |
| ATTCAATCATATAGTGGTAT+TGG | 0.341059 | 1_4:+66388926 | Msa0178960:CDS |
| AATTGATGAAAGTAACAAAT+TGG | 0.343540 | 1_4:+66389030 | Msa0178960:CDS |
| ACTCTCGCTATAAGACTTAC+AGG | 0.343612 | 1_4:-66388836 | None:intergenic |
| CGAATTAGAGACTGAAATTT+GGG | 0.344971 | 1_4:-66390322 | None:intergenic |
| CAAATTGGAGCATATTGTTT+GGG | 0.347369 | 1_4:+66389045 | Msa0178960:CDS |
| CATCAATTGTGAATTCATAT+TGG | 0.348150 | 1_4:-66389015 | None:intergenic |
| GAGCATATTGTTTGGGCATT+TGG | 0.348974 | 1_4:+66389052 | Msa0178960:CDS |
| ACAAATTGGAGCATATTGTT+TGG | 0.352856 | 1_4:+66389044 | Msa0178960:CDS |
| ATGACAACGACGAGGCTTCT+TGG | 0.366012 | 1_4:-66390572 | None:intergenic |
| TCAGTCTCTAATTCGATGTT+TGG | 0.372448 | 1_4:+66390330 | Msa0178960:CDS |
| ATGGTCTCACAGTTTGGTTT+GGG | 0.387072 | 1_4:+66389601 | Msa0178960:CDS |
| AATGGTCTCACAGTTTGGTT+TGG | 0.398201 | 1_4:+66389600 | Msa0178960:CDS |
| CCTCAAGTCACTAACATTGA+TGG | 0.399508 | 1_4:+66388269 | Msa0178960:CDS |
| AGTGAATTAGACAGATGAAT+TGG | 0.402311 | 1_4:+66390885 | Msa0178960:three_prime_UTR |
| GCAATGGCTTCTTTAATTGA+AGG | 0.406562 | 1_4:-66389409 | None:intergenic |
| TCAAATATTTGCCCTTCAAA+AGG | 0.411166 | 1_4:-66388299 | None:intergenic |
| TCCATTGATCCATCTTGCTT+CGG | 0.415346 | 1_4:+66387935 | Msa0178960:five_prime_UTR |
| ATACTAGTAATTACACAGTT+TGG | 0.415911 | 1_4:-66391015 | None:intergenic |
| ATCCATCGGGTGTTTATAAG+AGG | 0.417116 | 1_4:+66388537 | Msa0178960:CDS |
| TTTGCTGGAATGACAACAAC+AGG | 0.418779 | 1_4:+66389697 | Msa0178960:CDS |
| GTCATCTTGAAATAGTGAAT+TGG | 0.425948 | 1_4:+66390794 | Msa0178960:three_prime_UTR |
| AAAGTAATGGTCTCACAGTT+TGG | 0.427267 | 1_4:+66389595 | Msa0178960:CDS |
| GTAGTTACTAAGAGAACAAT+TGG | 0.430532 | 1_4:+66388665 | Msa0178960:CDS |
| TGAGATGCCTCTTGGAATAT+GGG | 0.433904 | 1_4:+66389147 | Msa0178960:CDS |
| TTGGGCCTTAGCTTATTTGA+AGG | 0.435274 | 1_4:+66389666 | Msa0178960:CDS |
| TATACGACCACCATCAACTT+TGG | 0.437731 | 1_4:-66390092 | None:intergenic |
| CTTTAAACATGAGTTTCATA+AGG | 0.439926 | 1_4:+66389531 | Msa0178960:CDS |
| GACGAGGCATGTTCTTCAAT+AGG | 0.443666 | 1_4:-66389962 | None:intergenic |
| ATGCGATCTTGATCAACAAT+TGG | 0.445860 | 1_4:-66388788 | None:intergenic |
| TGATTAGTTCCACCACAATC+TGG | 0.446933 | 1_4:-66390598 | None:intergenic |
| AACCGTTATGAGATGCCTCT+TGG | 0.448749 | 1_4:+66389139 | Msa0178960:CDS |
| AAAGACAAGTGAACGAGAAC+AGG | 0.453486 | 1_4:+66390366 | Msa0178960:CDS |
| CATGTAATAAACTGCAATGA+TGG | 0.453622 | 1_4:+66390292 | Msa0178960:CDS |
| GTTTGTCATCGTGGTGGTAT+TGG | 0.458689 | 1_4:+66388566 | Msa0178960:CDS |
| CAGATAGCGGGAAAGGGTAA+AGG | 0.460958 | 1_4:-66387826 | None:intergenic |
| TGGTAAAGAAAGTGATGCTT+CGG | 0.463955 | 1_4:+66388946 | Msa0178960:CDS |
| ATATTATTATTGTCTAAAGC+TGG | 0.466482 | 1_4:+66388809 | Msa0178960:CDS |
| CTCACAGTTTGGTTTGGGTG+TGG | 0.468983 | 1_4:+66389606 | Msa0178960:CDS |
| ATAACGGTTTATTCTATATG+TGG | 0.472493 | 1_4:-66389125 | None:intergenic |
| AACTGGGCAGATAGCGGGAA+AGG | 0.478957 | 1_4:-66387833 | None:intergenic |
| AAAACAAAAGGTCGGCCAAA+AGG | 0.495104 | 1_4:+66390520 | Msa0178960:CDS |
| TTGATAGGATCATGAAGGGT+TGG | 0.498564 | 1_4:+66390766 | Msa0178960:three_prime_UTR |
| TGAAGCAACTTAAAGGCATA+AGG | 0.499495 | 1_4:-66389995 | None:intergenic |
| AGAAGATTTCTTCCTTCGCA+TGG | 0.503824 | 1_4:+66389227 | Msa0178960:CDS |
| CGTTGTCATGTTCCAGATTG+TGG | 0.504732 | 1_4:+66390586 | Msa0178960:CDS |
| AATTGTGAATTCATATTGGA+AGG | 0.507660 | 1_4:-66389011 | None:intergenic |
| CCAAAAGGATCAAGACCAAA+AGG | 0.514192 | 1_4:+66390535 | Msa0178960:CDS |
| CTTTCTCGTCTCCATCGAAA+AGG | 0.515070 | 1_4:-66390247 | None:intergenic |
| AGATAGCGGGAAAGGGTAAA+GGG | 0.516008 | 1_4:-66387825 | None:intergenic |
| GTCAAAATTAGAAATCAAGC+TGG | 0.517568 | 1_4:+66389884 | Msa0178960:CDS |
| TTTAATTGAAGGATCTTGAT+CGG | 0.518039 | 1_4:-66389398 | None:intergenic |
| TGGTAATAATAAACTATAGC+AGG | 0.519610 | 1_4:-66390995 | None:intergenic |
| ATTGGAATGTTACGATAAGC+AGG | 0.522557 | 1_4:-66388770 | None:intergenic |
| TAAGCAATGATGCTAGTGAT+TGG | 0.525487 | 1_4:+66388240 | Msa0178960:CDS |
| ACCACGCAAAACTGTTGAAG+TGG | 0.526679 | 1_4:+66388592 | Msa0178960:CDS |
| TGGGTTGGTGTTGATAATCA+TGG | 0.529258 | 1_4:+66389166 | Msa0178960:CDS |
| TTCCAAGAGGCATCTCATAA+CGG | 0.531646 | 1_4:-66389141 | None:intergenic |
| CAACATCATACCAAAGTTGA+TGG | 0.538288 | 1_4:+66390082 | Msa0178960:CDS |
| TGAACGAGAATGGAAAGTAA+TGG | 0.544871 | 1_4:+66389582 | Msa0178960:CDS |
| ACCGAAGCAAGATGGATCAA+TGG | 0.546537 | 1_4:-66387936 | None:intergenic |
| ATGTTATTGACTCGAGGCAA+GGG | 0.551467 | 1_4:-66388371 | None:intergenic |
| CTCAAGTCACTAACATTGAT+GGG | 0.551567 | 1_4:+66388270 | Msa0178960:CDS |
| GAAGATTTCTTCCTTCGCAT+GGG | 0.556681 | 1_4:+66389228 | Msa0178960:CDS |
| GTGCTTTGATAGGATCATGA+AGG | 0.556862 | 1_4:+66390761 | Msa0178960:three_prime_UTR |
| AAAGTCCTTCAAATAAGCTA+AGG | 0.560983 | 1_4:-66389671 | None:intergenic |
| CGAGTCAATAACATTGATGA+GGG | 0.562576 | 1_4:+66388380 | Msa0178960:CDS |
| GTTTGGCAATTCCATTGCAA+TGG | 0.567761 | 1_4:-66389425 | None:intergenic |
| GGAAAATGTGTTGTAATCTG+AGG | 0.568974 | 1_4:-66389941 | None:intergenic |
| ATGTGATTGTAGTGCAAAGA+TGG | 0.570079 | 1_4:+66388643 | Msa0178960:CDS |
| ATGTTAGTGACTTGAGGCAA+GGG | 0.572230 | 1_4:-66388263 | None:intergenic |
| GTGTCTGAAGAGAATCCATC+GGG | 0.572540 | 1_4:+66388524 | Msa0178960:CDS |
| ACTGGGCAGATAGCGGGAAA+GGG | 0.574204 | 1_4:-66387832 | None:intergenic |
| AATTAAAGAAGCCATTGCAA+TGG | 0.576797 | 1_4:+66389414 | Msa0178960:CDS |
| TAGAAATCAAGCTGGAGAAG+AGG | 0.577533 | 1_4:+66389892 | Msa0178960:CDS |
| CGAGTTATTGGATGACAAAG+AGG | 0.580002 | 1_4:+66388736 | Msa0178960:CDS |
| AATGTTATTGACTCGAGGCA+AGG | 0.583411 | 1_4:-66388372 | None:intergenic |
| TACTAAGAGAACAATTGGCA+TGG | 0.583498 | 1_4:+66388670 | Msa0178960:CDS |
| AGTCACTAACATTGATGGGT+GGG | 0.589348 | 1_4:+66388274 | Msa0178960:CDS |
| TTGTCGCAAAGCTGTCAAGT+TGG | 0.589381 | 1_4:+66389476 | Msa0178960:CDS |
| TAGAGACTGAAATTTGGGAG+AGG | 0.592397 | 1_4:-66390317 | None:intergenic |
| TCATCATATCTCGAACCTAG+TGG | 0.597376 | 1_4:-66389508 | None:intergenic |
| AATGTTAGTGACTTGAGGCA+AGG | 0.597462 | 1_4:-66388264 | None:intergenic |
| AGGGAATTTGTTTGTCATCG+TGG | 0.598966 | 1_4:+66388557 | Msa0178960:CDS |
| TCCCTCTTATAAACACCCGA+TGG | 0.599604 | 1_4:-66388539 | None:intergenic |
| TACCTTTATAGCCCATGCGA+AGG | 0.601051 | 1_4:-66389239 | None:intergenic |
| ACATGTGATTGATTTGGAAG+CGG | 0.601602 | 1_4:+66390450 | Msa0178960:CDS |
| TGTGTCTGAAGAGAATCCAT+CGG | 0.605132 | 1_4:+66388523 | Msa0178960:CDS |
| CTGTTGAAGTGGAAAATCAA+AGG | 0.606328 | 1_4:+66388603 | Msa0178960:CDS |
| CTTTGTCATCCAATAACTCG+TGG | 0.606716 | 1_4:-66388733 | None:intergenic |
| AAGGATCAAGACCAAAAGGA+GGG | 0.611165 | 1_4:+66390539 | Msa0178960:CDS |
| CCATCAATGTTAGTGACTTG+AGG | 0.613145 | 1_4:-66388269 | None:intergenic |
| CTAAGGCCCAAAATTTACGA+TGG | 0.615020 | 1_4:-66389654 | None:intergenic |
| TAAGGCCCAAAATTTACGAT+GGG | 0.615697 | 1_4:-66389653 | None:intergenic |
| ATGCCTCTTGGAATATGGGT+TGG | 0.616141 | 1_4:+66389151 | Msa0178960:CDS |
| TCGAGTCAATAACATTGATG+AGG | 0.618775 | 1_4:+66388379 | Msa0178960:CDS |
| GAATTTGTTTGTCATCGTGG+TGG | 0.618777 | 1_4:+66388560 | Msa0178960:CDS |
| AAGTCACTAACATTGATGGG+TGG | 0.624878 | 1_4:+66388273 | Msa0178960:CDS |
| TCCATCGGGTGTTTATAAGA+GGG | 0.625908 | 1_4:+66388538 | Msa0178960:CDS |
| TGTCATGTTCCAGATTGTGG+TGG | 0.637809 | 1_4:+66390589 | Msa0178960:CDS |
| AGTGAATTGGACAGATGAAG+CGG | 0.644693 | 1_4:+66390807 | Msa0178960:three_prime_UTR |
| CTCTCGCTATAAGACTTACA+GGG | 0.647869 | 1_4:-66388835 | None:intergenic |
| TCATCAATGTTATTGACTCG+AGG | 0.652221 | 1_4:-66388377 | None:intergenic |
| AAAGGATCAAGACCAAAAGG+AGG | 0.655085 | 1_4:+66390538 | Msa0178960:CDS |
| GCAGCAATTGAAGCTGACAA+TGG | 0.657455 | 1_4:+66390046 | Msa0178960:CDS |
| CACTTATTAGGAGATTGAGA+AGG | 0.671859 | 1_4:-66390667 | None:intergenic |
| ACACCAACCCATATTCCAAG+AGG | 0.676376 | 1_4:-66389154 | None:intergenic |
| TGCTTTGATAGGATCATGAA+GGG | 0.676443 | 1_4:+66390762 | Msa0178960:three_prime_UTR |
| AAGTTTGAAAGATCGAGATG+AGG | 0.682349 | 1_4:+66388988 | Msa0178960:CDS |
| CATCATACCAAAGTTGATGG+TGG | 0.683172 | 1_4:+66390085 | Msa0178960:CDS |
| AGGATCAAGACCAAAAGGAG+GGG | 0.696841 | 1_4:+66390540 | Msa0178960:CDS |
| ATAAGGTGTGAGTATAGACG+AGG | 0.720548 | 1_4:-66389978 | None:intergenic |
| GAGTCAATAACATTGATGAG+GGG | 0.722596 | 1_4:+66388381 | Msa0178960:CDS |
| TCTGGAACATGACAACGACG+AGG | 0.797744 | 1_4:-66390580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATAAATAAAATAGAATTT+GGG | - | chr1_4:66388144-66388163 | None:intergenic | 10.0% |
| !! | ATCATAAATAAAATAGAATT+TGG | - | chr1_4:66388145-66388164 | None:intergenic | 10.0% |
| !!! | TAATATTAACTGTATTTTTA+TGG | + | chr1_4:66390739-66390758 | Msa0178960:three_prime_UTR | 10.0% |
| !! | TTAGTTAAGAATTATATACA+TGG | - | chr1_4:66388089-66388108 | None:intergenic | 15.0% |
| !! | CATAAATAAAATAGAATTTG+GGG | - | chr1_4:66388143-66388162 | None:intergenic | 15.0% |
| !!! | AATTTTATTCAATCATATAG+TGG | + | chr1_4:66388920-66388939 | Msa0178960:CDS | 15.0% |
| !! | AATATCATCATAAAGATAAA+AGG | + | chr1_4:66390409-66390428 | Msa0178960:CDS | 15.0% |
| !!! | GTTTGTTTCTTTTCTTTTAA+TGG | + | chr1_4:66388019-66388038 | Msa0178960:intron | 20.0% |
| !! | TGTTTATTTGCAAAACAAAA+TGG | + | chr1_4:66388458-66388477 | Msa0178960:CDS | 20.0% |
| !!! | AACAAAATGGATTTTCTATT+AGG | + | chr1_4:66388471-66388490 | Msa0178960:CDS | 20.0% |
| !!! | ATATTATTATTGTCTAAAGC+TGG | + | chr1_4:66388809-66388828 | Msa0178960:CDS | 20.0% |
| !!! | CTAATATCTTTTTCTAAGAA+TGG | - | chr1_4:66388899-66388918 | None:intergenic | 20.0% |
| !! | AATTGATGAAAGTAACAAAT+TGG | + | chr1_4:66389030-66389049 | Msa0178960:CDS | 20.0% |
| !!! | CATGGAAATTCAATTTTTTT+TGG | + | chr1_4:66389184-66389203 | Msa0178960:CDS | 20.0% |
| !!! | TGATTGTTATATTTTTGTGT+AGG | + | chr1_4:66389850-66389869 | Msa0178960:intron | 20.0% |
| !!! | TTATTACATGACTAGATTTT+GGG | - | chr1_4:66390282-66390301 | None:intergenic | 20.0% |
| !!! | TTTATTACATGACTAGATTT+TGG | - | chr1_4:66390283-66390302 | None:intergenic | 20.0% |
| !!! | TGTGTAATTAGTATATTTTG+TGG | + | chr1_4:66390929-66390948 | Msa0178960:three_prime_UTR | 20.0% |
| ! | TTGAGAACATAATATTTACC+TGG | - | chr1_4:66387975-66387994 | None:intergenic | 25.0% |
| ! | AACACAAACTTAGCTAATTT+GGG | - | chr1_4:66388061-66388080 | None:intergenic | 25.0% |
| ! | AAACACAAACTTAGCTAATT+TGG | - | chr1_4:66388062-66388081 | None:intergenic | 25.0% |
| !! | TCAAATATTTTCCCTTCAAA+AGG | - | chr1_4:66388410-66388429 | None:intergenic | 25.0% |
| ! | CTTGAGTTAGAGAAAAAAAT+AGG | + | chr1_4:66388860-66388879 | Msa0178960:CDS | 25.0% |
| ! | ATTCAATCATATAGTGGTAT+TGG | + | chr1_4:66388926-66388945 | Msa0178960:CDS | 25.0% |
| ! | AATTGTGAATTCATATTGGA+AGG | - | chr1_4:66389014-66389033 | None:intergenic | 25.0% |
| ! | CATCAATTGTGAATTCATAT+TGG | - | chr1_4:66389018-66389037 | None:intergenic | 25.0% |
| ! | ATAACGGTTTATTCTATATG+TGG | - | chr1_4:66389128-66389147 | None:intergenic | 25.0% |
| ! | TTTAATTGAAGGATCTTGAT+CGG | - | chr1_4:66389401-66389420 | None:intergenic | 25.0% |
| ! | CTTTAAACATGAGTTTCATA+AGG | + | chr1_4:66389531-66389550 | Msa0178960:CDS | 25.0% |
| !!! | AAAATCTGTCAAACTTGTTT+TGG | - | chr1_4:66389767-66389786 | None:intergenic | 25.0% |
| !!! | TGTTATATTTTTGTGTAGGT+TGG | + | chr1_4:66389854-66389873 | Msa0178960:intron | 25.0% |
| !! | TGTAAAGAGTTTCAATTTTC+AGG | + | chr1_4:66390154-66390173 | Msa0178960:CDS | 25.0% |
| !!! | CCTTTTGTTTTTGAAACAAT+AGG | - | chr1_4:66390511-66390530 | None:intergenic | 25.0% |
| ! | CCTATTGTTTCAAAAACAAA+AGG | + | chr1_4:66390508-66390527 | Msa0178960:CDS | 25.0% |
| ! | TTGTTTCAAAAACAAAAGGT+CGG | + | chr1_4:66390512-66390531 | Msa0178960:CDS | 25.0% |
| ! | TCCAAACAAAAAGAGAAAAA+TGG | + | chr1_4:66390636-66390655 | Msa0178960:CDS | 25.0% |
| !!! | TCCATTTTTCTCTTTTTGTT+TGG | - | chr1_4:66390640-66390659 | None:intergenic | 25.0% |
| ! | CCAATTAAAACACACTTATT+AGG | - | chr1_4:66390682-66390701 | None:intergenic | 25.0% |
| !!! | CCTAATAAGTGTGTTTTAAT+TGG | + | chr1_4:66390679-66390698 | Msa0178960:CDS | 25.0% |
| !!! | TATTTTTATGGTGCTTTGAT+AGG | + | chr1_4:66390751-66390770 | Msa0178960:three_prime_UTR | 25.0% |
| ! | ACAGTTTGATCAAAACTATT+TGG | - | chr1_4:66390833-66390852 | None:intergenic | 25.0% |
| !! | TGTGTAATTAGTGAATTTTG+TGG | + | chr1_4:66390850-66390869 | Msa0178960:three_prime_UTR | 25.0% |
| ! | TGGTAATAATAAACTATAGC+AGG | - | chr1_4:66390998-66391017 | None:intergenic | 25.0% |
| ! | ATACTAGTAATTACACAGTT+TGG | - | chr1_4:66391018-66391037 | None:intergenic | 25.0% |
| ! | ACAAAGTGAATGAGCTATTT+TGG | - | chr1_4:66387893-66387912 | None:intergenic | 30.0% |
| AATAGCTCATTCACTTTGTT+CGG | + | chr1_4:66387894-66387913 | Msa0178960:intron | 30.0% | |
| ACACAAACTTAGCTAATTTG+GGG | - | chr1_4:66388060-66388079 | None:intergenic | 30.0% | |
| TCAAATATTTGCCCTTCAAA+AGG | - | chr1_4:66388302-66388321 | None:intergenic | 30.0% | |
| GTAGTTACTAAGAGAACAAT+TGG | + | chr1_4:66388665-66388684 | Msa0178960:CDS | 30.0% | |
| AATTGGCATGGAGAAAAAAT+GGG | + | chr1_4:66388682-66388701 | Msa0178960:CDS | 30.0% | |
| TTAGAGAAAAAAATAGGCAC+AGG | + | chr1_4:66388866-66388885 | Msa0178960:CDS | 30.0% | |
| ACAAATTGGAGCATATTGTT+TGG | + | chr1_4:66389044-66389063 | Msa0178960:CDS | 30.0% | |
| CAAATTGGAGCATATTGTTT+GGG | + | chr1_4:66389045-66389064 | Msa0178960:CDS | 30.0% | |
| ! | ATTTTCCTTTCACAAAAGCT+AGG | - | chr1_4:66389360-66389379 | None:intergenic | 30.0% |
| ! | TGATCGGTAAGAATTGTTTT+TGG | - | chr1_4:66389385-66389404 | None:intergenic | 30.0% |
| AATTAAAGAAGCCATTGCAA+TGG | + | chr1_4:66389414-66389433 | Msa0178960:CDS | 30.0% | |
| ! | CAAAATGCATGTTTTGTGTT+TGG | - | chr1_4:66389445-66389464 | None:intergenic | 30.0% |
| ! | CAAAACATGCATTTTGCATA+TGG | + | chr1_4:66389449-66389468 | Msa0178960:CDS | 30.0% |
| ! | TCTTTACCCATCGTAAATTT+TGG | + | chr1_4:66389647-66389666 | Msa0178960:CDS | 30.0% |
| ! | CTTTACCCATCGTAAATTTT+GGG | + | chr1_4:66389648-66389667 | Msa0178960:CDS | 30.0% |
| AAAGTCCTTCAAATAAGCTA+AGG | - | chr1_4:66389674-66389693 | None:intergenic | 30.0% | |
| !!! | TTGAAGGACTTTTTTTTTGC+TGG | + | chr1_4:66389682-66389701 | Msa0178960:CDS | 30.0% |
| GTCAAAATTAGAAATCAAGC+TGG | + | chr1_4:66389884-66389903 | Msa0178960:CDS | 30.0% | |
| !! | CGAAAAGGAAGATATTTTGA+TGG | - | chr1_4:66390235-66390254 | None:intergenic | 30.0% |
| ! | CAAAATATCTTCCTTTTCGA+TGG | + | chr1_4:66390236-66390255 | Msa0178960:CDS | 30.0% |
| CATGTAATAAACTGCAATGA+TGG | + | chr1_4:66390292-66390311 | Msa0178960:CDS | 30.0% | |
| CGAATTAGAGACTGAAATTT+GGG | - | chr1_4:66390325-66390344 | None:intergenic | 30.0% | |
| TCGAATTAGAGACTGAAATT+TGG | - | chr1_4:66390326-66390345 | None:intergenic | 30.0% | |
| ! | GATATTTTCTAACTCTCTTG+TGG | - | chr1_4:66390395-66390414 | None:intergenic | 30.0% |
| TCAAGAACATGTGATTGATT+TGG | + | chr1_4:66390444-66390463 | Msa0178960:CDS | 30.0% | |
| GTCATCTTGAAATAGTGAAT+TGG | + | chr1_4:66390794-66390813 | Msa0178960:three_prime_UTR | 30.0% | |
| AGTGAATTAGACAGATGAAT+TGG | + | chr1_4:66390885-66390904 | Msa0178960:three_prime_UTR | 30.0% | |
| !! | GATTCTTTTGGTTGGAAACT+GGG | - | chr1_4:66387852-66387871 | None:intergenic | 35.0% |
| !! | TGATTCTTTTGGTTGGAAAC+TGG | - | chr1_4:66387853-66387872 | None:intergenic | 35.0% |
| !! | AAGTGAATGAGCTATTTTGG+AGG | - | chr1_4:66387890-66387909 | None:intergenic | 35.0% |
| AACAAACAATGAGTGCAAGA+TGG | - | chr1_4:66388006-66388025 | None:intergenic | 35.0% | |
| CACAAACTTAGCTAATTTGG+GGG | - | chr1_4:66388059-66388078 | None:intergenic | 35.0% | |
| TAAGCAATGATGCTAGTGAT+TGG | + | chr1_4:66388240-66388259 | Msa0178960:CDS | 35.0% | |
| CTCAAGTCACTAACATTGAT+GGG | + | chr1_4:66388270-66388289 | Msa0178960:CDS | 35.0% | |
| !! | TCATCAATGTTATTGACTCG+AGG | - | chr1_4:66388380-66388399 | None:intergenic | 35.0% |
| TCGAGTCAATAACATTGATG+AGG | + | chr1_4:66388379-66388398 | Msa0178960:CDS | 35.0% | |
| CGAGTCAATAACATTGATGA+GGG | + | chr1_4:66388380-66388399 | Msa0178960:CDS | 35.0% | |
| GAGTCAATAACATTGATGAG+GGG | + | chr1_4:66388381-66388400 | Msa0178960:CDS | 35.0% | |
| CTGTTGAAGTGGAAAATCAA+AGG | + | chr1_4:66388603-66388622 | Msa0178960:CDS | 35.0% | |
| ATGTGATTGTAGTGCAAAGA+TGG | + | chr1_4:66388643-66388662 | Msa0178960:CDS | 35.0% | |
| TACTAAGAGAACAATTGGCA+TGG | + | chr1_4:66388670-66388689 | Msa0178960:CDS | 35.0% | |
| CAATTGGCATGGAGAAAAAA+TGG | + | chr1_4:66388681-66388700 | Msa0178960:CDS | 35.0% | |
| ATTGGAATGTTACGATAAGC+AGG | - | chr1_4:66388773-66388792 | None:intergenic | 35.0% | |
| ATGCGATCTTGATCAACAAT+TGG | - | chr1_4:66388791-66388810 | None:intergenic | 35.0% | |
| TGGTAAAGAAAGTGATGCTT+CGG | + | chr1_4:66388946-66388965 | Msa0178960:CDS | 35.0% | |
| AAGTTTGAAAGATCGAGATG+AGG | + | chr1_4:66388988-66389007 | Msa0178960:CDS | 35.0% | |
| !! | AGTTTCCTAGCTTTTGTGAA+AGG | + | chr1_4:66389352-66389371 | Msa0178960:CDS | 35.0% |
| GCAATGGCTTCTTTAATTGA+AGG | - | chr1_4:66389412-66389431 | None:intergenic | 35.0% | |
| !!! | AGTTGGTTTTCTTTTCCACT+AGG | + | chr1_4:66389493-66389512 | Msa0178960:CDS | 35.0% |
| ! | CAGATGATTTTGAACGAGAA+TGG | + | chr1_4:66389572-66389591 | Msa0178960:CDS | 35.0% |
| TGAACGAGAATGGAAAGTAA+TGG | + | chr1_4:66389582-66389601 | Msa0178960:CDS | 35.0% | |
| AAAGTAATGGTCTCACAGTT+TGG | + | chr1_4:66389595-66389614 | Msa0178960:CDS | 35.0% | |
| TAAGGCCCAAAATTTACGAT+GGG | - | chr1_4:66389656-66389675 | None:intergenic | 35.0% | |
| GGAAAATGTGTTGTAATCTG+AGG | - | chr1_4:66389944-66389963 | None:intergenic | 35.0% | |
| ! | TGAAGCAACTTAAAGGCATA+AGG | - | chr1_4:66389998-66390017 | None:intergenic | 35.0% |
| CTCATGTTGAAGCAACTTAA+AGG | - | chr1_4:66390005-66390024 | None:intergenic | 35.0% | |
| CAACATCATACCAAAGTTGA+TGG | + | chr1_4:66390082-66390101 | Msa0178960:CDS | 35.0% | |
| TCAGTCTCTAATTCGATGTT+TGG | + | chr1_4:66390330-66390349 | Msa0178960:CDS | 35.0% | |
| ATCACATGTTCTTGAGTTTC+AGG | - | chr1_4:66390439-66390458 | None:intergenic | 35.0% | |
| !! | ACATGTGATTGATTTGGAAG+CGG | + | chr1_4:66390450-66390469 | Msa0178960:CDS | 35.0% |
| AACGTCACAGTCATCATTAT+TGG | - | chr1_4:66390482-66390501 | None:intergenic | 35.0% | |
| CACTTATTAGGAGATTGAGA+AGG | - | chr1_4:66390670-66390689 | None:intergenic | 35.0% | |
| TGCTTTGATAGGATCATGAA+GGG | + | chr1_4:66390762-66390781 | Msa0178960:three_prime_UTR | 35.0% | |
| !! | CATTTTGATCAAAGCAGCTT+CGG | - | chr1_4:66390911-66390930 | None:intergenic | 35.0% |
| ! | GCAGTCTTGATTCTTTTGGT+TGG | - | chr1_4:66387860-66387879 | None:intergenic | 40.0% |
| ! | CTGAGCAGTCTTGATTCTTT+TGG | - | chr1_4:66387864-66387883 | None:intergenic | 40.0% |
| TCCATTGATCCATCTTGCTT+CGG | + | chr1_4:66387935-66387954 | Msa0178960:five_prime_UTR | 40.0% | |
| TCGGTCAAAAAGCTAATTCC+AGG | + | chr1_4:66387954-66387973 | Msa0178960:five_prime_UTR | 40.0% | |
| ATGTTAGTGACTTGAGGCAA+GGG | - | chr1_4:66388266-66388285 | None:intergenic | 40.0% | |
| AATGTTAGTGACTTGAGGCA+AGG | - | chr1_4:66388267-66388286 | None:intergenic | 40.0% | |
| CCATCAATGTTAGTGACTTG+AGG | - | chr1_4:66388272-66388291 | None:intergenic | 40.0% | |
| CCTCAAGTCACTAACATTGA+TGG | + | chr1_4:66388269-66388288 | Msa0178960:CDS | 40.0% | |
| AAGTCACTAACATTGATGGG+TGG | + | chr1_4:66388273-66388292 | Msa0178960:CDS | 40.0% | |
| ! | AGTCACTAACATTGATGGGT+GGG | + | chr1_4:66388274-66388293 | Msa0178960:CDS | 40.0% |
| !! | ATGTTATTGACTCGAGGCAA+GGG | - | chr1_4:66388374-66388393 | None:intergenic | 40.0% |
| !! | AATGTTATTGACTCGAGGCA+AGG | - | chr1_4:66388375-66388394 | None:intergenic | 40.0% |
| ! | ATGAGGGGATTCCTTTTGAA+GGG | + | chr1_4:66388396-66388415 | Msa0178960:CDS | 40.0% |
| TGTGTCTGAAGAGAATCCAT+CGG | + | chr1_4:66388523-66388542 | Msa0178960:CDS | 40.0% | |
| ATCCATCGGGTGTTTATAAG+AGG | + | chr1_4:66388537-66388556 | Msa0178960:CDS | 40.0% | |
| TCCATCGGGTGTTTATAAGA+GGG | + | chr1_4:66388538-66388557 | Msa0178960:CDS | 40.0% | |
| ! | AGGGAATTTGTTTGTCATCG+TGG | + | chr1_4:66388557-66388576 | Msa0178960:CDS | 40.0% |
| ! | GAATTTGTTTGTCATCGTGG+TGG | + | chr1_4:66388560-66388579 | Msa0178960:CDS | 40.0% |
| TTCTCACAACCACGAGTTAT+TGG | + | chr1_4:66388724-66388743 | Msa0178960:CDS | 40.0% | |
| CTTTGTCATCCAATAACTCG+TGG | - | chr1_4:66388736-66388755 | None:intergenic | 40.0% | |
| CGAGTTATTGGATGACAAAG+AGG | + | chr1_4:66388736-66388755 | Msa0178960:CDS | 40.0% | |
| CTCTCGCTATAAGACTTACA+GGG | - | chr1_4:66388838-66388857 | None:intergenic | 40.0% | |
| ACTCTCGCTATAAGACTTAC+AGG | - | chr1_4:66388839-66388858 | None:intergenic | 40.0% | |
| GAGCATATTGTTTGGGCATT+TGG | + | chr1_4:66389052-66389071 | Msa0178960:CDS | 40.0% | |
| ! | ATTCGCGCATATGAAGCTTT+TGG | + | chr1_4:66389082-66389101 | Msa0178960:CDS | 40.0% |
| !! | TTCCAAGAGGCATCTCATAA+CGG | - | chr1_4:66389144-66389163 | None:intergenic | 40.0% |
| ATGAGATGCCTCTTGGAATA+TGG | + | chr1_4:66389146-66389165 | Msa0178960:CDS | 40.0% | |
| TGAGATGCCTCTTGGAATAT+GGG | + | chr1_4:66389147-66389166 | Msa0178960:CDS | 40.0% | |
| !! | TGGGTTGGTGTTGATAATCA+TGG | + | chr1_4:66389166-66389185 | Msa0178960:CDS | 40.0% |
| AGAAGATTTCTTCCTTCGCA+TGG | + | chr1_4:66389227-66389246 | Msa0178960:CDS | 40.0% | |
| GAAGATTTCTTCCTTCGCAT+GGG | + | chr1_4:66389228-66389247 | Msa0178960:CDS | 40.0% | |
| GTTTGGCAATTCCATTGCAA+TGG | - | chr1_4:66389428-66389447 | None:intergenic | 40.0% | |
| TCATCATATCTCGAACCTAG+TGG | - | chr1_4:66389511-66389530 | None:intergenic | 40.0% | |
| AATGGTCTCACAGTTTGGTT+TGG | + | chr1_4:66389600-66389619 | Msa0178960:CDS | 40.0% | |
| ! | ATGGTCTCACAGTTTGGTTT+GGG | + | chr1_4:66389601-66389620 | Msa0178960:CDS | 40.0% |
| CTAAGGCCCAAAATTTACGA+TGG | - | chr1_4:66389657-66389676 | None:intergenic | 40.0% | |
| TTGGGCCTTAGCTTATTTGA+AGG | + | chr1_4:66389666-66389685 | Msa0178960:CDS | 40.0% | |
| TTTGCTGGAATGACAACAAC+AGG | + | chr1_4:66389697-66389716 | Msa0178960:CDS | 40.0% | |
| TAGAAATCAAGCTGGAGAAG+AGG | + | chr1_4:66389892-66389911 | Msa0178960:CDS | 40.0% | |
| ATAAGGTGTGAGTATAGACG+AGG | - | chr1_4:66389981-66390000 | None:intergenic | 40.0% | |
| !! | CATCATACCAAAGTTGATGG+TGG | + | chr1_4:66390085-66390104 | Msa0178960:CDS | 40.0% |
| TATACGACCACCATCAACTT+TGG | - | chr1_4:66390095-66390114 | None:intergenic | 40.0% | |
| TAGAGACTGAAATTTGGGAG+AGG | - | chr1_4:66390320-66390339 | None:intergenic | 40.0% | |
| AAAGACAAGTGAACGAGAAC+AGG | + | chr1_4:66390366-66390385 | Msa0178960:CDS | 40.0% | |
| AAAACAAAAGGTCGGCCAAA+AGG | + | chr1_4:66390520-66390539 | Msa0178960:CDS | 40.0% | |
| !!! | CCTTTTGGTCTTGATCCTTT+TGG | - | chr1_4:66390538-66390557 | None:intergenic | 40.0% |
| CCAAAAGGATCAAGACCAAA+AGG | + | chr1_4:66390535-66390554 | Msa0178960:CDS | 40.0% | |
| AAAGGATCAAGACCAAAAGG+AGG | + | chr1_4:66390538-66390557 | Msa0178960:CDS | 40.0% | |
| AAGGATCAAGACCAAAAGGA+GGG | + | chr1_4:66390539-66390558 | Msa0178960:CDS | 40.0% | |
| ! | TGATTAGTTCCACCACAATC+TGG | - | chr1_4:66390601-66390620 | None:intergenic | 40.0% |
| GTGCTTTGATAGGATCATGA+AGG | + | chr1_4:66390761-66390780 | Msa0178960:three_prime_UTR | 40.0% | |
| TTGATAGGATCATGAAGGGT+TGG | + | chr1_4:66390766-66390785 | Msa0178960:three_prime_UTR | 40.0% | |
| AGTGAATTGGACAGATGAAG+CGG | + | chr1_4:66390807-66390826 | Msa0178960:three_prime_UTR | 40.0% | |
| !! | AGATAGCGGGAAAGGGTAAA+GGG | - | chr1_4:66387828-66387847 | None:intergenic | 45.0% |
| ACCGAAGCAAGATGGATCAA+TGG | - | chr1_4:66387939-66387958 | None:intergenic | 45.0% | |
| ! | GCTTTTTGACCGAAGCAAGA+TGG | - | chr1_4:66387947-66387966 | None:intergenic | 45.0% |
| !! | ATGGGTGGGTTCCTTTTGAA+GGG | + | chr1_4:66388288-66388307 | Msa0178960:CDS | 45.0% |
| ! | GATGAGGGGATTCCTTTTGA+AGG | + | chr1_4:66388395-66388414 | Msa0178960:CDS | 45.0% |
| GTGTCTGAAGAGAATCCATC+GGG | + | chr1_4:66388524-66388543 | Msa0178960:CDS | 45.0% | |
| TCCCTCTTATAAACACCCGA+TGG | - | chr1_4:66388542-66388561 | None:intergenic | 45.0% | |
| GTTTGTCATCGTGGTGGTAT+TGG | + | chr1_4:66388566-66388585 | Msa0178960:CDS | 45.0% | |
| ACCACGCAAAACTGTTGAAG+TGG | + | chr1_4:66388592-66388611 | Msa0178960:CDS | 45.0% | |
| ! | TCCACTTCAACAGTTTTGCG+TGG | - | chr1_4:66388596-66388615 | None:intergenic | 45.0% |
| TGGCATGGAGAAAAAATGGG+TGG | + | chr1_4:66388685-66388704 | Msa0178960:CDS | 45.0% | |
| AACCGTTATGAGATGCCTCT+TGG | + | chr1_4:66389139-66389158 | Msa0178960:CDS | 45.0% | |
| ATGCCTCTTGGAATATGGGT+TGG | + | chr1_4:66389151-66389170 | Msa0178960:CDS | 45.0% | |
| ACACCAACCCATATTCCAAG+AGG | - | chr1_4:66389157-66389176 | None:intergenic | 45.0% | |
| ! | TTCCTTCGCATGGGCTATAA+AGG | + | chr1_4:66389237-66389256 | Msa0178960:CDS | 45.0% |
| TACCTTTATAGCCCATGCGA+AGG | - | chr1_4:66389242-66389261 | None:intergenic | 45.0% | |
| TTGTCGCAAAGCTGTCAAGT+TGG | + | chr1_4:66389476-66389495 | Msa0178960:CDS | 45.0% | |
| GACGAGGCATGTTCTTCAAT+AGG | - | chr1_4:66389965-66389984 | None:intergenic | 45.0% | |
| GCAGCAATTGAAGCTGACAA+TGG | + | chr1_4:66390046-66390065 | Msa0178960:CDS | 45.0% | |
| CTTTCTCGTCTCCATCGAAA+AGG | - | chr1_4:66390250-66390269 | None:intergenic | 45.0% | |
| AGGATCAAGACCAAAAGGAG+GGG | + | chr1_4:66390540-66390559 | Msa0178960:CDS | 45.0% | |
| CGTTGTCATGTTCCAGATTG+TGG | + | chr1_4:66390586-66390605 | Msa0178960:CDS | 45.0% | |
| TGTCATGTTCCAGATTGTGG+TGG | + | chr1_4:66390589-66390608 | Msa0178960:CDS | 45.0% | |
| !!! | ATTTTTATTTTTAAGAAAAT+AGG | + | chr1_4:66388176-66388195 | Msa0178960:intron | 5.0% |
| !! | CAGATAGCGGGAAAGGGTAA+AGG | - | chr1_4:66387829-66387848 | None:intergenic | 50.0% |
| TTGGAAACTGGGCAGATAGC+GGG | - | chr1_4:66387841-66387860 | None:intergenic | 50.0% | |
| GTTGGAAACTGGGCAGATAG+CGG | - | chr1_4:66387842-66387861 | None:intergenic | 50.0% | |
| !! | GATGGGTGGGTTCCTTTTGA+AGG | + | chr1_4:66388287-66388306 | Msa0178960:CDS | 50.0% |
| !! | CTCACAGTTTGGTTTGGGTG+TGG | + | chr1_4:66389606-66389625 | Msa0178960:CDS | 50.0% |
| ATGACAACGACGAGGCTTCT+TGG | - | chr1_4:66390575-66390594 | None:intergenic | 50.0% | |
| ! | TCTGGAACATGACAACGACG+AGG | - | chr1_4:66390583-66390602 | None:intergenic | 50.0% |
| !! | ACTGGGCAGATAGCGGGAAA+GGG | - | chr1_4:66387835-66387854 | None:intergenic | 55.0% |
| !! | AACTGGGCAGATAGCGGGAA+AGG | - | chr1_4:66387836-66387855 | None:intergenic | 55.0% |
| ! | GCAGCTTCAACCCCTCCTTT+TGG | - | chr1_4:66390553-66390572 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 66387814 | 66391076 | 66387814 | ID=Msa0178960;Name=Msa0178960 |
| chr1_4 | mRNA | 66387814 | 66391076 | 66387814 | ID=Msa0178960-mRNA-1;Parent=Msa0178960;Name=Msa0178960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=123|1|1|1|0.5|0.4|5|350|776 |
| chr1_4 | exon | 66387814 | 66387841 | 66387814 | ID=Msa0178960-mRNA-1:exon:21720;Parent=Msa0178960-mRNA-1 |
| chr1_4 | exon | 66387910 | 66387975 | 66387910 | ID=Msa0178960-mRNA-1:exon:21721;Parent=Msa0178960-mRNA-1 |
| chr1_4 | exon | 66388198 | 66389258 | 66388198 | ID=Msa0178960-mRNA-1:exon:21722;Parent=Msa0178960-mRNA-1 |
| chr1_4 | exon | 66389352 | 66389795 | 66389352 | ID=Msa0178960-mRNA-1:exon:21723;Parent=Msa0178960-mRNA-1 |
| chr1_4 | exon | 66389872 | 66391076 | 66389872 | ID=Msa0178960-mRNA-1:exon:21724;Parent=Msa0178960-mRNA-1 |
| chr1_4 | five_prime_UTR | 66387814 | 66387841 | 66387814 | ID=Msa0178960-mRNA-1:five_prime_utr;Parent=Msa0178960-mRNA-1 |
| chr1_4 | five_prime_UTR | 66387910 | 66387975 | 66387910 | ID=Msa0178960-mRNA-1:five_prime_utr;Parent=Msa0178960-mRNA-1 |
| chr1_4 | five_prime_UTR | 66388198 | 66388226 | 66388198 | ID=Msa0178960-mRNA-1:five_prime_utr;Parent=Msa0178960-mRNA-1 |
| chr1_4 | CDS | 66388227 | 66389258 | 66388227 | ID=Msa0178960-mRNA-1:cds;Parent=Msa0178960-mRNA-1 |
| chr1_4 | CDS | 66389352 | 66389795 | 66389352 | ID=Msa0178960-mRNA-1:cds;Parent=Msa0178960-mRNA-1 |
| chr1_4 | CDS | 66389872 | 66390726 | 66389872 | ID=Msa0178960-mRNA-1:cds;Parent=Msa0178960-mRNA-1 |
| chr1_4 | three_prime_UTR | 66390727 | 66391076 | 66390727 | ID=Msa0178960-mRNA-1:three_prime_utr;Parent=Msa0178960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
