Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944620 | sp|Q9S7A0|DHE3_ARATH | 88.998 | 409 | 45 | 0 | 1 | 409 | 1 | 409 | 0.0 | 777 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944620 | G7KPN3 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0888980 | Msa0944620 | 0.912611 | 1.596935e-83 | -8.615850e-47 |
| Msa0944620 | Msa0980910 | 0.889988 | 1.477809e-73 | -8.615850e-47 |
| Msa0944620 | Msa1077060 | 0.821618 | 3.668954e-53 | -8.615850e-47 |
| Msa0944620 | Msa1122790 | 0.828889 | 6.994186e-55 | -8.615850e-47 |
| Msa0944620 | Msa1265020 | 0.823277 | 1.510756e-53 | -8.615850e-47 |
| Msa0944620 | Msa1337850 | 0.823314 | 1.480725e-53 | -8.615850e-47 |
| Msa0944620 | Msa1360260 | 0.804845 | 1.776633e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944620 | MtrunA17_Chr6g0461461 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 843 |
| Msa0944620 | MtrunA17_Chr7g0253311 | 90.754 | 411 | 38 | 0 | 1 | 411 | 1 | 411 | 0.0 | 790 |
| Msa0944620 | MtrunA17_Chr5g0399821 | 79.319 | 411 | 85 | 0 | 1 | 411 | 1 | 411 | 0.0 | 702 |
| Msa0944620 | MtrunA17_Chr4g0055521 | 79.805 | 411 | 83 | 0 | 1 | 411 | 1 | 411 | 0.0 | 698 |
| Msa0944620 | MtrunA17_Chr8g0341541 | 27.346 | 373 | 258 | 4 | 16 | 375 | 224 | 596 | 2.33e-36 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944620 | AT3G03910.1 | 88.998 | 409 | 45 | 0 | 1 | 409 | 1 | 409 | 0.0 | 777 |
| Msa0944620 | AT5G18170.1 | 88.078 | 411 | 49 | 0 | 1 | 411 | 1 | 411 | 0.0 | 774 |
| Msa0944620 | AT5G07440.2 | 79.319 | 411 | 85 | 0 | 1 | 411 | 1 | 411 | 0.0 | 703 |
| Msa0944620 | AT5G07440.1 | 79.319 | 411 | 85 | 0 | 1 | 411 | 1 | 411 | 0.0 | 703 |
| Msa0944620 | AT3G03910.2 | 90.000 | 350 | 35 | 0 | 1 | 350 | 1 | 350 | 0.0 | 664 |
| Msa0944620 | AT5G07440.3 | 78.378 | 296 | 64 | 0 | 1 | 296 | 1 | 296 | 2.36e-178 | 499 |
| Msa0944620 | AT1G51720.1 | 27.989 | 368 | 243 | 5 | 24 | 375 | 235 | 596 | 1.62e-34 | 135 |
| Msa0944620 | AT1G51720.3 | 27.989 | 368 | 243 | 5 | 24 | 375 | 235 | 596 | 1.62e-34 | 135 |
| Msa0944620 | AT1G51720.2 | 28.571 | 322 | 208 | 5 | 24 | 329 | 235 | 550 | 6.32e-33 | 130 |
| Msa0944620 | AT1G51720.4 | 29.577 | 213 | 150 | 0 | 24 | 236 | 235 | 447 | 2.21e-24 | 105 |
Find 110 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATATATATACCTATTT+TGG | 0.056312 | 6_3:-21570863 | None:intergenic |
| CAGAAAATTCATGATCTTAT+TGG | 0.148809 | 6_3:+21571901 | Msa0944620:CDS |
| GGCTGCTTCCACTATAAATT+TGG | 0.168389 | 6_3:-21573821 | None:intergenic |
| AATTGATCCTAAGTCAATTT+TGG | 0.182450 | 6_3:+21573096 | Msa0944620:CDS |
| TTATAGATATTCAATTTATA+TGG | 0.220508 | 6_3:+21574851 | Msa0944620:three_prime_UTR |
| GAGGCTTTGCTTAATGAATA+TGG | 0.226245 | 6_3:+21572357 | Msa0944620:CDS |
| AAAGAGAACAGAGGAATTAA+AGG | 0.232542 | 6_3:+21573055 | Msa0944620:CDS |
| TAAGTTGGCCTCTAGGCTTT+TGG | 0.233956 | 6_3:+21571014 | Msa0944620:CDS |
| GATTCCATTCAGAGAAATTA+AGG | 0.243391 | 6_3:+21571068 | Msa0944620:CDS |
| GCCAAAGTTCCATCATCTTT+AGG | 0.261182 | 6_3:-21571430 | None:intergenic |
| TGATGTTCCTGCACCTGATA+TGG | 0.264000 | 6_3:+21571933 | Msa0944620:CDS |
| TGGCTACATATGTTGGATTC+AGG | 0.271638 | 6_3:+21571449 | Msa0944620:CDS |
| CCAAAGTTCCATCATCTTTA+GGG | 0.278732 | 6_3:-21571429 | None:intergenic |
| TTTCACATCTTTGAAACCTT+TGG | 0.330788 | 6_3:-21574502 | None:intergenic |
| CCAGACATATATGCAAATTC+AGG | 0.335620 | 6_3:+21573991 | Msa0944620:CDS |
| TTTAAGCTTCCCAACCTCTA+AGG | 0.338153 | 6_3:-21574605 | None:intergenic |
| TGTGGTCCTGTTCCCATATC+AGG | 0.339231 | 6_3:-21571946 | None:intergenic |
| TATCTGATCCCTCCTTTCAT+AGG | 0.350979 | 6_3:-21571496 | None:intergenic |
| GCTAATGCATTCACTTCATC+TGG | 0.354567 | 6_3:-21571754 | None:intergenic |
| GATGAGTATTCAAAATTTCA+TGG | 0.363676 | 6_3:+21572155 | Msa0944620:CDS |
| AGAGGAATTAAAGGATTTCA+TGG | 0.367534 | 6_3:+21573064 | Msa0944620:CDS |
| CATTTACGTCCCTAAAATGT+AGG | 0.380133 | 6_3:+21574679 | Msa0944620:three_prime_UTR |
| AAACTAACCTCATCAGCATC+TGG | 0.382033 | 6_3:-21573859 | None:intergenic |
| GCAGTAGCAAATTTACCATA+TGG | 0.388893 | 6_3:+21571799 | Msa0944620:CDS |
| TGCACAATTAATAAATGAAA+AGG | 0.394871 | 6_3:+21572946 | Msa0944620:CDS |
| TGGTCAACGGTTTGTTATAC+AGG | 0.395946 | 6_3:+21572392 | Msa0944620:CDS |
| CTTGAATATCTCTTACTAAA+GGG | 0.399869 | 6_3:+21570928 | Msa0944620:five_prime_UTR |
| CTTACCTTAATTTCTCTGAA+TGG | 0.404941 | 6_3:-21571072 | None:intergenic |
| ATCTGGGTCAGTTGGGTGAT+TGG | 0.405284 | 6_3:-21573842 | None:intergenic |
| TATAGATATTCAATTTATAT+GGG | 0.405449 | 6_3:+21574852 | Msa0944620:three_prime_UTR |
| GCAAGGGCCACTGTCCTTAG+AGG | 0.408079 | 6_3:+21574591 | Msa0944620:CDS |
| TTTGAATACTTAAGTAGGCT+TGG | 0.409262 | 6_3:-21573034 | None:intergenic |
| GAATATGGAAAGAGTGTATC+TGG | 0.410289 | 6_3:+21572372 | Msa0944620:CDS |
| GGCCAACTTAAAGTTCCTAT+TGG | 0.416568 | 6_3:-21571001 | None:intergenic |
| CCTGAATTTGCATATATGTC+TGG | 0.422712 | 6_3:-21573991 | None:intergenic |
| TCTTGAATATCTCTTACTAA+AGG | 0.426983 | 6_3:+21570927 | Msa0944620:five_prime_UTR |
| CCCTAAAGATGATGGAACTT+TGG | 0.427048 | 6_3:+21571429 | Msa0944620:CDS |
| GTTCTTATACCTGCTGCTCT+TGG | 0.432408 | 6_3:+21573133 | Msa0944620:CDS |
| TCTTCAACCAAAATTGACTT+AGG | 0.437278 | 6_3:-21573103 | None:intergenic |
| TAAGTGTTTCTGAGTTAGAA+AGG | 0.444829 | 6_3:+21571860 | Msa0944620:CDS |
| GTCAACCCCTATACCTCCTT+TGG | 0.447730 | 6_3:-21571827 | None:intergenic |
| GATTAAAGCCAAATTTATAG+TGG | 0.447740 | 6_3:+21573813 | Msa0944620:CDS |
| GGAACTTTAAGTTGGCCTCT+AGG | 0.454303 | 6_3:+21571007 | Msa0944620:CDS |
| TAGGGACGTAAATGCAAGAA+TGG | 0.458281 | 6_3:-21574670 | None:intergenic |
| ATTCATGTGGAATGAAGAAA+AGG | 0.460849 | 6_3:+21574452 | Msa0944620:CDS |
| GGCCACTGTCCTTAGAGGTT+GGG | 0.464668 | 6_3:+21574596 | Msa0944620:CDS |
| TACCAATAGGAACTTTAAGT+TGG | 0.473029 | 6_3:+21570999 | Msa0944620:CDS |
| CTTATACCTGCTGCTCTTGG+TGG | 0.473338 | 6_3:+21573136 | Msa0944620:CDS |
| CCTGCACCTGATATGGGAAC+AGG | 0.473655 | 6_3:+21571940 | Msa0944620:CDS |
| CATCAGCATCTGGGTCAGTT+GGG | 0.474480 | 6_3:-21573849 | None:intergenic |
| CAGTAGCAAATTTACCATAT+GGG | 0.476254 | 6_3:+21571800 | Msa0944620:CDS |
| CTAGGAAGAGATGCAGCTAC+AGG | 0.476509 | 6_3:+21572312 | Msa0944620:CDS |
| AAGGATCTTGGTGGATCTCT+AGG | 0.477089 | 6_3:+21572294 | Msa0944620:intron |
| ATGCACTAGCAGCTACCAAT+AGG | 0.482916 | 6_3:+21570986 | Msa0944620:CDS |
| GATGTTCCTGCACCTGATAT+GGG | 0.484802 | 6_3:+21571934 | Msa0944620:CDS |
| GGAACTTTGGCTACATATGT+TGG | 0.485022 | 6_3:+21571442 | Msa0944620:CDS |
| TCATCAGCATCTGGGTCAGT+TGG | 0.487608 | 6_3:-21573850 | None:intergenic |
| GTTGCTGTAAGTGACATAAC+AGG | 0.493735 | 6_3:+21572980 | Msa0944620:CDS |
| ATCTGATCCCTCCTTTCATA+GGG | 0.494505 | 6_3:-21571495 | None:intergenic |
| TAGCTACTTTGAGTGGGTCC+AGG | 0.501744 | 6_3:+21574026 | Msa0944620:CDS |
| CTGTCACTACTGCGGGAGAA+TGG | 0.502995 | 6_3:-21572178 | None:intergenic |
| AGAGATGCAGCTACAGGAAG+AGG | 0.503016 | 6_3:+21572318 | Msa0944620:CDS |
| GGGGTGCCAAAGGAGGTATA+GGG | 0.507760 | 6_3:+21571821 | Msa0944620:CDS |
| CTCTTGGTGGAGTCATCAAT+AGG | 0.511178 | 6_3:+21573149 | Msa0944620:CDS |
| GGGCCACTGTCCTTAGAGGT+TGG | 0.521012 | 6_3:+21574595 | Msa0944620:CDS |
| CATTCTCCCGCAGTAGTGAC+AGG | 0.524214 | 6_3:+21572179 | Msa0944620:CDS |
| GCATGATTGTGATCTTCGTA+TGG | 0.526857 | 6_3:+21574539 | Msa0944620:CDS |
| GCACAATTAATAAATGAAAA+GGG | 0.531317 | 6_3:+21572947 | Msa0944620:CDS |
| TGTAGCATCCCTAAAGATGA+TGG | 0.531935 | 6_3:+21571421 | Msa0944620:CDS |
| GGGTGCCAAAGGAGGTATAG+GGG | 0.533576 | 6_3:+21571822 | Msa0944620:CDS |
| CCTGTTCCCATATCAGGTGC+AGG | 0.535228 | 6_3:-21571940 | None:intergenic |
| TCAGAAACACTTAACTCTGA+AGG | 0.541308 | 6_3:-21571850 | None:intergenic |
| ATTTACGTCCCTAAAATGTA+GGG | 0.543272 | 6_3:+21574680 | Msa0944620:three_prime_UTR |
| ATGACTCCACCAAGAGCAGC+AGG | 0.543294 | 6_3:-21573142 | None:intergenic |
| ACGGTTAACTGCAAGTGTAA+AGG | 0.546868 | 6_3:-21574565 | None:intergenic |
| TTACAGTTAGCTACTTTGAG+TGG | 0.548473 | 6_3:+21574019 | Msa0944620:CDS |
| AGTAGCAAATTTACCATATG+GGG | 0.548835 | 6_3:+21571801 | Msa0944620:CDS |
| CATTAGCACAACTAATGACA+TGG | 0.551350 | 6_3:+21571770 | Msa0944620:CDS |
| AACTAACCTCATCAGCATCT+GGG | 0.553542 | 6_3:-21573858 | None:intergenic |
| TACAGTTAGCTACTTTGAGT+GGG | 0.554093 | 6_3:+21574020 | Msa0944620:CDS |
| AGTAAGAGATATTCAAGATG+TGG | 0.558831 | 6_3:-21570922 | None:intergenic |
| AACTCTAGAGGCCCTATGAA+AGG | 0.558841 | 6_3:+21571484 | Msa0944620:CDS |
| ACACATATTACTCTTATGAA+AGG | 0.562376 | 6_3:-21574645 | None:intergenic |
| CAGAAACACTTAACTCTGAA+GGG | 0.568150 | 6_3:-21571849 | None:intergenic |
| TTGCAGTTAACCGTGTAGCA+AGG | 0.571162 | 6_3:+21574574 | Msa0944620:CDS |
| TGCAGTTAACCGTGTAGCAA+GGG | 0.572335 | 6_3:+21574575 | Msa0944620:CDS |
| AGGTGTCCTCTTTGCAACTG+AGG | 0.584722 | 6_3:+21572338 | Msa0944620:CDS |
| CATGATTGTGATCTTCGTAT+GGG | 0.599830 | 6_3:+21574540 | Msa0944620:CDS |
| CTAGAGGCCCTATGAAAGGA+GGG | 0.600199 | 6_3:+21571488 | Msa0944620:CDS |
| TTTGAATGCAGACGATGGCA+TGG | 0.601445 | 6_3:+21572126 | Msa0944620:intron |
| AATTTGCATATATGTCTGGA+AGG | 0.603948 | 6_3:-21573987 | None:intergenic |
| AACTGACCCAGATGCTGATG+AGG | 0.606496 | 6_3:+21573852 | Msa0944620:CDS |
| GGAGCTATAAAGAATAGCAA+TGG | 0.615254 | 6_3:+21573001 | Msa0944620:CDS |
| GCAAAGCCTCAGTTGCAAAG+AGG | 0.616452 | 6_3:-21572344 | None:intergenic |
| AGAACATACAAGGATTCATG+TGG | 0.616462 | 6_3:+21574439 | Msa0944620:intron |
| TTAAAGACATACATGACCAA+AGG | 0.616871 | 6_3:+21574486 | Msa0944620:CDS |
| ATTCAACATGATAACTCTAG+AGG | 0.617647 | 6_3:+21571472 | Msa0944620:CDS |
| TCTAGAGGCCCTATGAAAGG+AGG | 0.618079 | 6_3:+21571487 | Msa0944620:CDS |
| GACATATATGCAAATTCAGG+AGG | 0.618468 | 6_3:+21573994 | Msa0944620:CDS |
| TGATATGGGAACAGGACCAC+AGG | 0.619474 | 6_3:+21571948 | Msa0944620:CDS |
| GAAAGAGTGTATCTGGTCAA+CGG | 0.628658 | 6_3:+21572379 | Msa0944620:CDS |
| GGACAGTGGCCCTTGCTACA+CGG | 0.632846 | 6_3:-21574584 | None:intergenic |
| CAATTAATAAATGAAAAGGG+TGG | 0.642073 | 6_3:+21572950 | Msa0944620:CDS |
| GAATATAAATAACCTCAGGA+TGG | 0.644448 | 6_3:-21571519 | None:intergenic |
| GGAATTAAAGGATTTCATGG+TGG | 0.677893 | 6_3:+21573067 | Msa0944620:CDS |
| TTCCCAACCTCTAAGGACAG+TGG | 0.686018 | 6_3:-21574598 | None:intergenic |
| ATCCAATCCCAAAAGCCTAG+AGG | 0.686949 | 6_3:-21571022 | None:intergenic |
| GTAGCAAATTTACCATATGG+GGG | 0.712264 | 6_3:+21571802 | Msa0944620:CDS |
| AAGTATTCAAAAGAGAACAG+AGG | 0.716008 | 6_3:+21573046 | Msa0944620:CDS |
| AGGGATCAGATACCATCCTG+AGG | 0.734957 | 6_3:+21571507 | Msa0944620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATATATACCTATTTT+GGG | - | chr6_3:21570865-21570884 | None:intergenic | 10.0% |
| !!! | TATTATATATATACCTATTT+TGG | - | chr6_3:21570866-21570885 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAACTAATGTAT+TGG | + | chr6_3:21571713-21571732 | Msa0944620:intron | 10.0% |
| !!! | TAATTTAATTTACTTACTAT+TGG | - | chr6_3:21572209-21572228 | None:intergenic | 10.0% |
| !! | TAAAAAATTAGAAATGAAAT+TGG | - | chr6_3:21572265-21572284 | None:intergenic | 10.0% |
| !!! | TAATTTTTTATTTTGAATGA+AGG | + | chr6_3:21572275-21572294 | Msa0944620:intron | 10.0% |
| !! | CAAAAATACTAATTATTAAT+GGG | - | chr6_3:21572865-21572884 | None:intergenic | 10.0% |
| !! | TCAAAAATACTAATTATTAA+TGG | - | chr6_3:21572866-21572885 | None:intergenic | 10.0% |
| !! | TTATAGATATTCAATTTATA+TGG | + | chr6_3:21574851-21574870 | Msa0944620:three_prime_UTR | 10.0% |
| !! | TATAGATATTCAATTTATAT+GGG | + | chr6_3:21574852-21574871 | Msa0944620:three_prime_UTR | 10.0% |
| !!! | TTATATATATACCTATTTTG+GGG | - | chr6_3:21570864-21570883 | None:intergenic | 15.0% |
| !!! | ATTTGATTAAGTTGTTTATT+CGG | + | chr6_3:21571293-21571312 | Msa0944620:intron | 15.0% |
| !! | AATCCAATAAATTAGTTATT+CGG | - | chr6_3:21571579-21571598 | None:intergenic | 15.0% |
| !! | ATTCATTATATGTTAATGTT+TGG | + | chr6_3:21572468-21572487 | Msa0944620:intron | 15.0% |
| !! | TTAAAATAGAAATTTGATTC+TGG | - | chr6_3:21573250-21573269 | None:intergenic | 15.0% |
| !! | AATTTAGTAAATGATCAAAA+TGG | - | chr6_3:21574055-21574074 | None:intergenic | 15.0% |
| !!! | ATTTTAGATTGAATAAACAA+TGG | + | chr6_3:21574335-21574354 | Msa0944620:intron | 15.0% |
| !! | TTTCATGTAACTATATTATA+AGG | + | chr6_3:21574392-21574411 | Msa0944620:intron | 15.0% |
| !!! | ATGTTGTTTAATGAAAATTC+AGG | + | chr6_3:21571393-21571412 | Msa0944620:intron | 20.0% |
| !!! | TTAGAGACAAAGTTTTAAAT+AGG | - | chr6_3:21572655-21572674 | None:intergenic | 20.0% |
| !! | TGCACAATTAATAAATGAAA+AGG | + | chr6_3:21572946-21572965 | Msa0944620:CDS | 20.0% |
| !! | GCACAATTAATAAATGAAAA+GGG | + | chr6_3:21572947-21572966 | Msa0944620:CDS | 20.0% |
| !! | TATAATAATTCTGTTACGAT+CGG | - | chr6_3:21573373-21573392 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTCTCAACTTT+TGG | + | chr6_3:21573764-21573783 | Msa0944620:intron | 20.0% |
| !!! | ATCTCTTTTTGTTTGATAAA+GGG | - | chr6_3:21573902-21573921 | None:intergenic | 20.0% |
| !!! | AACATTCAAATGTTTTTAAC+TGG | + | chr6_3:21573923-21573942 | Msa0944620:intron | 20.0% |
| !!! | ACATTCAAATGTTTTTAACT+GGG | + | chr6_3:21573924-21573943 | Msa0944620:intron | 20.0% |
| !!! | TTTTCAAAATCTGCAAAATA+AGG | - | chr6_3:21573951-21573970 | None:intergenic | 20.0% |
| !!! | TTTTCTCTATTTCTTTAATG+TGG | + | chr6_3:21574757-21574776 | Msa0944620:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTCTTCCCCAAAAT+AGG | + | chr6_3:21570850-21570869 | Msa0944620:five_prime_UTR | 25.0% |
| ! | TCTTGAATATCTCTTACTAA+AGG | + | chr6_3:21570927-21570946 | Msa0944620:five_prime_UTR | 25.0% |
| ! | CTTGAATATCTCTTACTAAA+GGG | + | chr6_3:21570928-21570947 | Msa0944620:five_prime_UTR | 25.0% |
| ! | TTGTTTAATGAAAATTCAGG+TGG | + | chr6_3:21571396-21571415 | Msa0944620:intron | 25.0% |
| ! | TCAAGAATATAAATAACCTC+AGG | - | chr6_3:21571526-21571545 | None:intergenic | 25.0% |
| ! | TGACCGAATAACTAATTTAT+TGG | + | chr6_3:21571573-21571592 | Msa0944620:intron | 25.0% |
| ! | AATGTATTGGATTATTATGC+AGG | + | chr6_3:21571726-21571745 | Msa0944620:intron | 25.0% |
| ! | CAGAAAATTCATGATCTTAT+TGG | + | chr6_3:21571901-21571920 | Msa0944620:CDS | 25.0% |
| ! | GAAGTTAAACAATGATTGTT+AGG | - | chr6_3:21572101-21572120 | None:intergenic | 25.0% |
| ! | GATGAGTATTCAAAATTTCA+TGG | + | chr6_3:21572155-21572174 | Msa0944620:CDS | 25.0% |
| !!! | TTATTTTGAATGAAGGATCT+TGG | + | chr6_3:21572282-21572301 | Msa0944620:intron | 25.0% |
| !! | ATGTCACGTTTTTCATATTA+CGG | + | chr6_3:21572531-21572550 | Msa0944620:intron | 25.0% |
| ! | GGTCAATAATTTATAAGACA+TGG | - | chr6_3:21572715-21572734 | None:intergenic | 25.0% |
| ! | GAAAAATACGTAACATTGTT+GGG | - | chr6_3:21572898-21572917 | None:intergenic | 25.0% |
| ! | TGAAAAATACGTAACATTGT+TGG | - | chr6_3:21572899-21572918 | None:intergenic | 25.0% |
| !! | AACAATGTTACGTATTTTTC+AGG | + | chr6_3:21572898-21572917 | Msa0944620:intron | 25.0% |
| !! | ACAATGTTACGTATTTTTCA+GGG | + | chr6_3:21572899-21572918 | Msa0944620:intron | 25.0% |
| ! | CAATTAATAAATGAAAAGGG+TGG | + | chr6_3:21572950-21572969 | Msa0944620:CDS | 25.0% |
| !! | TCTCTTTTGAATACTTAAGT+AGG | - | chr6_3:21573042-21573061 | None:intergenic | 25.0% |
| !! | AATTGATCCTAAGTCAATTT+TGG | + | chr6_3:21573096-21573115 | Msa0944620:CDS | 25.0% |
| ! | TTAGTACTTGTTTGATATCA+TGG | - | chr6_3:21573514-21573533 | None:intergenic | 25.0% |
| ! | TTGTATTTCGTTAGTAAGTT+TGG | - | chr6_3:21573627-21573646 | None:intergenic | 25.0% |
| ! | GATTAAAGCCAAATTTATAG+TGG | + | chr6_3:21573813-21573832 | Msa0944620:CDS | 25.0% |
| !!! | GATCTCTTTTTGTTTGATAA+AGG | - | chr6_3:21573903-21573922 | None:intergenic | 25.0% |
| !!! | TTGCAGATTTTGAAAAAGAA+AGG | + | chr6_3:21573955-21573974 | Msa0944620:intron | 25.0% |
| !!! | TGCAGATTTTGAAAAAGAAA+GGG | + | chr6_3:21573956-21573975 | Msa0944620:intron | 25.0% |
| !! | TGTAATTTTCAGAACATACA+AGG | + | chr6_3:21574429-21574448 | Msa0944620:intron | 25.0% |
| ! | ACACATATTACTCTTATGAA+AGG | - | chr6_3:21574648-21574667 | None:intergenic | 25.0% |
| !! | ATCAATATCCCTACATTTTA+GGG | - | chr6_3:21574691-21574710 | None:intergenic | 25.0% |
| !! | TATCAATATCCCTACATTTT+AGG | - | chr6_3:21574692-21574711 | None:intergenic | 25.0% |
| AGTAAGAGATATTCAAGATG+TGG | - | chr6_3:21570925-21570944 | None:intergenic | 30.0% | |
| TACCAATAGGAACTTTAAGT+TGG | + | chr6_3:21570999-21571018 | Msa0944620:CDS | 30.0% | |
| GATTCCATTCAGAGAAATTA+AGG | + | chr6_3:21571068-21571087 | Msa0944620:CDS | 30.0% | |
| CTTACCTTAATTTCTCTGAA+TGG | - | chr6_3:21571075-21571094 | None:intergenic | 30.0% | |
| ATTCAACATGATAACTCTAG+AGG | + | chr6_3:21571472-21571491 | Msa0944620:CDS | 30.0% | |
| GAATATAAATAACCTCAGGA+TGG | - | chr6_3:21571522-21571541 | None:intergenic | 30.0% | |
| TTTATTGGATTAAACTCACC+TGG | + | chr6_3:21571588-21571607 | Msa0944620:intron | 30.0% | |
| TTATTGGATTAAACTCACCT+GGG | + | chr6_3:21571589-21571608 | Msa0944620:intron | 30.0% | |
| CAGTAGCAAATTTACCATAT+GGG | + | chr6_3:21571800-21571819 | Msa0944620:CDS | 30.0% | |
| AGTAGCAAATTTACCATATG+GGG | + | chr6_3:21571801-21571820 | Msa0944620:CDS | 30.0% | |
| ! | TAAGTGTTTCTGAGTTAGAA+AGG | + | chr6_3:21571860-21571879 | Msa0944620:CDS | 30.0% |
| TCATTATTTGTACTAACCTG+TGG | - | chr6_3:21571967-21571986 | None:intergenic | 30.0% | |
| TATTAATGGGAAGACATGTT+TGG | - | chr6_3:21572852-21572871 | None:intergenic | 30.0% | |
| !!! | TTACGTATTTTTCAGGGTTT+TGG | + | chr6_3:21572905-21572924 | Msa0944620:intron | 30.0% |
| TTTGAATACTTAAGTAGGCT+TGG | - | chr6_3:21573037-21573056 | None:intergenic | 30.0% | |
| AAGTATTCAAAAGAGAACAG+AGG | + | chr6_3:21573046-21573065 | Msa0944620:CDS | 30.0% | |
| AAAGAGAACAGAGGAATTAA+AGG | + | chr6_3:21573055-21573074 | Msa0944620:CDS | 30.0% | |
| AGAGGAATTAAAGGATTTCA+TGG | + | chr6_3:21573064-21573083 | Msa0944620:CDS | 30.0% | |
| ! | TCTTCAACCAAAATTGACTT+AGG | - | chr6_3:21573106-21573125 | None:intergenic | 30.0% |
| GCTAAAATTTAATCCAAACC+AGG | - | chr6_3:21573189-21573208 | None:intergenic | 30.0% | |
| CAAAATTGTGTGTATGTGTA+AGG | + | chr6_3:21573326-21573345 | Msa0944620:intron | 30.0% | |
| !! | ATAATCATTTTAGTCGTGTC+TGG | - | chr6_3:21573660-21573679 | None:intergenic | 30.0% |
| ACTAGAGTAACAATTAGCAA+AGG | - | chr6_3:21573719-21573738 | None:intergenic | 30.0% | |
| !! | GTTTTAGACTTATGTGCATA+AGG | - | chr6_3:21573743-21573762 | None:intergenic | 30.0% |
| ! | TTTGTTCTCAACTTTTGGTA+TGG | + | chr6_3:21573769-21573788 | Msa0944620:intron | 30.0% |
| !! | GCAGATTTTGAAAAAGAAAG+GGG | + | chr6_3:21573957-21573976 | Msa0944620:intron | 30.0% |
| AATTTGCATATATGTCTGGA+AGG | - | chr6_3:21573990-21574009 | None:intergenic | 30.0% | |
| AAATGATCAAAATGGATACC+TGG | - | chr6_3:21574047-21574066 | None:intergenic | 30.0% | |
| !!! | GCATTTTTTTTGCGATACAA+GGG | - | chr6_3:21574097-21574116 | None:intergenic | 30.0% |
| !!! | TGCATTTTTTTTGCGATACA+AGG | - | chr6_3:21574098-21574117 | None:intergenic | 30.0% |
| TGCAATTTCCTTGTACATTA+AGG | + | chr6_3:21574114-21574133 | Msa0944620:intron | 30.0% | |
| ATTTCCTTGTACATTAAGGA+AGG | + | chr6_3:21574118-21574137 | Msa0944620:intron | 30.0% | |
| TATACCTTCCTTAATGTACA+AGG | - | chr6_3:21574125-21574144 | None:intergenic | 30.0% | |
| ATTCATGTGGAATGAAGAAA+AGG | + | chr6_3:21574452-21574471 | Msa0944620:CDS | 30.0% | |
| TTAAAGACATACATGACCAA+AGG | + | chr6_3:21574486-21574505 | Msa0944620:CDS | 30.0% | |
| !! | TTTCACATCTTTGAAACCTT+TGG | - | chr6_3:21574505-21574524 | None:intergenic | 30.0% |
| ATTTACGTCCCTAAAATGTA+GGG | + | chr6_3:21574680-21574699 | Msa0944620:three_prime_UTR | 30.0% | |
| CACGACTTCATTCTAATGTA+TGG | + | chr6_3:21571317-21571336 | Msa0944620:intron | 35.0% | |
| CCAAAGTTCCATCATCTTTA+GGG | - | chr6_3:21571432-21571451 | None:intergenic | 35.0% | |
| CATTAGCACAACTAATGACA+TGG | + | chr6_3:21571770-21571789 | Msa0944620:CDS | 35.0% | |
| GCAGTAGCAAATTTACCATA+TGG | + | chr6_3:21571799-21571818 | Msa0944620:CDS | 35.0% | |
| GTAGCAAATTTACCATATGG+GGG | + | chr6_3:21571802-21571821 | Msa0944620:CDS | 35.0% | |
| CAGAAACACTTAACTCTGAA+GGG | - | chr6_3:21571852-21571871 | None:intergenic | 35.0% | |
| TCAGAAACACTTAACTCTGA+AGG | - | chr6_3:21571853-21571872 | None:intergenic | 35.0% | |
| TATAGAACAGACACTTCTGA+TGG | + | chr6_3:21572036-21572055 | Msa0944620:intron | 35.0% | |
| !!! | TTTGTTTTGAATGCAGACGA+TGG | + | chr6_3:21572121-21572140 | Msa0944620:intron | 35.0% |
| ! | TTTTGAATGAAGGATCTTGG+TGG | + | chr6_3:21572285-21572304 | Msa0944620:intron | 35.0% |
| GAGGCTTTGCTTAATGAATA+TGG | + | chr6_3:21572357-21572376 | Msa0944620:CDS | 35.0% | |
| ! | GAATATGGAAAGAGTGTATC+TGG | + | chr6_3:21572372-21572391 | Msa0944620:CDS | 35.0% |
| !!! | TCTGACTAGGTTTTAAATCG+CGG | + | chr6_3:21572500-21572519 | Msa0944620:intron | 35.0% |
| ! | TCACGTTTTTCATATTACGG+AGG | + | chr6_3:21572534-21572553 | Msa0944620:intron | 35.0% |
| GATCATAGACATGATAGCTT+TGG | + | chr6_3:21572596-21572615 | Msa0944620:intron | 35.0% | |
| TATTGACCGCATAACTATGA+TGG | + | chr6_3:21572727-21572746 | Msa0944620:intron | 35.0% | |
| ACAGTACCATCATAGTTATG+CGG | - | chr6_3:21572736-21572755 | None:intergenic | 35.0% | |
| ! | ATAACGCGTCACAATGATTT+TGG | - | chr6_3:21572790-21572809 | None:intergenic | 35.0% |
| TAACGATGACATTGTGATTC+TGG | + | chr6_3:21572810-21572829 | Msa0944620:intron | 35.0% | |
| !!! | TTTTCAGGGTTTTGGAAATG+TGG | + | chr6_3:21572913-21572932 | Msa0944620:intron | 35.0% |
| !!! | TTTCAGGGTTTTGGAAATGT+GGG | + | chr6_3:21572914-21572933 | Msa0944620:intron | 35.0% |
| GGAGCTATAAAGAATAGCAA+TGG | + | chr6_3:21573001-21573020 | Msa0944620:CDS | 35.0% | |
| GGAATTAAAGGATTTCATGG+TGG | + | chr6_3:21573067-21573086 | Msa0944620:CDS | 35.0% | |
| AATTGTGTGTATGTGTAAGG+TGG | + | chr6_3:21573329-21573348 | Msa0944620:intron | 35.0% | |
| ATGCATGTTTGATATCACGA+TGG | + | chr6_3:21573397-21573416 | Msa0944620:intron | 35.0% | |
| ATACACGTTTGATATCACGA+TGG | + | chr6_3:21573444-21573463 | Msa0944620:intron | 35.0% | |
| ! | TCAACTTTTGGTATGGATGA+AGG | + | chr6_3:21573776-21573795 | Msa0944620:intron | 35.0% |
| ! | CAACTTTTGGTATGGATGAA+GGG | + | chr6_3:21573777-21573796 | Msa0944620:intron | 35.0% |
| CCTGAATTTGCATATATGTC+TGG | - | chr6_3:21573994-21574013 | None:intergenic | 35.0% | |
| CCAGACATATATGCAAATTC+AGG | + | chr6_3:21573991-21574010 | Msa0944620:CDS | 35.0% | |
| GACATATATGCAAATTCAGG+AGG | + | chr6_3:21573994-21574013 | Msa0944620:CDS | 35.0% | |
| ! | TTACAGTTAGCTACTTTGAG+TGG | + | chr6_3:21574019-21574038 | Msa0944620:CDS | 35.0% |
| ! | TACAGTTAGCTACTTTGAGT+GGG | + | chr6_3:21574020-21574039 | Msa0944620:CDS | 35.0% |
| AGAACATACAAGGATTCATG+TGG | + | chr6_3:21574439-21574458 | Msa0944620:intron | 35.0% | |
| CATGATTGTGATCTTCGTAT+GGG | + | chr6_3:21574540-21574559 | Msa0944620:CDS | 35.0% | |
| CATTTACGTCCCTAAAATGT+AGG | + | chr6_3:21574679-21574698 | Msa0944620:three_prime_UTR | 35.0% | |
| GGCCAACTTAAAGTTCCTAT+TGG | - | chr6_3:21571004-21571023 | None:intergenic | 40.0% | |
| TGTAGCATCCCTAAAGATGA+TGG | + | chr6_3:21571421-21571440 | Msa0944620:CDS | 40.0% | |
| !! | CCCTAAAGATGATGGAACTT+TGG | + | chr6_3:21571429-21571448 | Msa0944620:CDS | 40.0% |
| GCCAAAGTTCCATCATCTTT+AGG | - | chr6_3:21571433-21571452 | None:intergenic | 40.0% | |
| GGAACTTTGGCTACATATGT+TGG | + | chr6_3:21571442-21571461 | Msa0944620:CDS | 40.0% | |
| TGGCTACATATGTTGGATTC+AGG | + | chr6_3:21571449-21571468 | Msa0944620:CDS | 40.0% | |
| ATCTGATCCCTCCTTTCATA+GGG | - | chr6_3:21571498-21571517 | None:intergenic | 40.0% | |
| TATCTGATCCCTCCTTTCAT+AGG | - | chr6_3:21571499-21571518 | None:intergenic | 40.0% | |
| TTGAGCAAGAACATACTCCA+AGG | - | chr6_3:21571640-21571659 | None:intergenic | 40.0% | |
| TTGGAGTATGTTCTTGCTCA+AGG | + | chr6_3:21571639-21571658 | Msa0944620:intron | 40.0% | |
| GCTAATGCATTCACTTCATC+TGG | - | chr6_3:21571757-21571776 | None:intergenic | 40.0% | |
| ! | GAAAGAGTGTATCTGGTCAA+CGG | + | chr6_3:21572379-21572398 | Msa0944620:CDS | 40.0% |
| !! | TGGTCAACGGTTTGTTATAC+AGG | + | chr6_3:21572392-21572411 | Msa0944620:CDS | 40.0% |
| GGAGAATCGTGATTAAATGC+AGG | + | chr6_3:21572555-21572574 | Msa0944620:intron | 40.0% | |
| !!! | TTCAGGGTTTTGGAAATGTG+GGG | + | chr6_3:21572915-21572934 | Msa0944620:intron | 40.0% |
| !! | TTTTGGAAATGTGGGGTCAT+GGG | + | chr6_3:21572922-21572941 | Msa0944620:CDS | 40.0% |
| GTTGCTGTAAGTGACATAAC+AGG | + | chr6_3:21572980-21572999 | Msa0944620:CDS | 40.0% | |
| TAGGTACTTTCACATAAGCC+TGG | + | chr6_3:21573168-21573187 | Msa0944620:intron | 40.0% | |
| ACTTTCACATAAGCCTGGTT+TGG | + | chr6_3:21573173-21573192 | Msa0944620:intron | 40.0% | |
| CGTTTGATATCACGATGGAT+TGG | + | chr6_3:21573449-21573468 | Msa0944620:intron | 40.0% | |
| !! | CGATGGATTGGAAGAAATCA+CGG | + | chr6_3:21573461-21573480 | Msa0944620:intron | 40.0% |
| GGCTGCTTCCACTATAAATT+TGG | - | chr6_3:21573824-21573843 | None:intergenic | 40.0% | |
| AACTAACCTCATCAGCATCT+GGG | - | chr6_3:21573861-21573880 | None:intergenic | 40.0% | |
| AAACTAACCTCATCAGCATC+TGG | - | chr6_3:21573862-21573881 | None:intergenic | 40.0% | |
| GCATGATTGTGATCTTCGTA+TGG | + | chr6_3:21574539-21574558 | Msa0944620:CDS | 40.0% | |
| ACGGTTAACTGCAAGTGTAA+AGG | - | chr6_3:21574568-21574587 | None:intergenic | 40.0% | |
| TTTAAGCTTCCCAACCTCTA+AGG | - | chr6_3:21574608-21574627 | None:intergenic | 40.0% | |
| TAGGGACGTAAATGCAAGAA+TGG | - | chr6_3:21574673-21574692 | None:intergenic | 40.0% | |
| ATGCACTAGCAGCTACCAAT+AGG | + | chr6_3:21570986-21571005 | Msa0944620:CDS | 45.0% | |
| !! | GGAACTTTAAGTTGGCCTCT+AGG | + | chr6_3:21571007-21571026 | Msa0944620:CDS | 45.0% |
| !! | TAAGTTGGCCTCTAGGCTTT+TGG | + | chr6_3:21571014-21571033 | Msa0944620:CDS | 45.0% |
| !! | AAGTTGGCCTCTAGGCTTTT+GGG | + | chr6_3:21571015-21571034 | Msa0944620:CDS | 45.0% |
| ATCCAATCCCAAAAGCCTAG+AGG | - | chr6_3:21571025-21571044 | None:intergenic | 45.0% | |
| ! | AACTCTAGAGGCCCTATGAA+AGG | + | chr6_3:21571484-21571503 | Msa0944620:CDS | 45.0% |
| TGGATTAAACTCACCTGGGT+TGG | + | chr6_3:21571593-21571612 | Msa0944620:intron | 45.0% | |
| ATGTTCTTGCTCAAGGTCTC+AGG | + | chr6_3:21571646-21571665 | Msa0944620:intron | 45.0% | |
| ATTCTCCCCGATGCCAATTT+GGG | + | chr6_3:21571673-21571692 | Msa0944620:intron | 45.0% | |
| TAACCCACCCAAATTGGCAT+CGG | - | chr6_3:21571683-21571702 | None:intergenic | 45.0% | |
| CTACACTAACCCACCCAAAT+TGG | - | chr6_3:21571689-21571708 | None:intergenic | 45.0% | |
| TGATGTTCCTGCACCTGATA+TGG | + | chr6_3:21571933-21571952 | Msa0944620:CDS | 45.0% | |
| GATGTTCCTGCACCTGATAT+GGG | + | chr6_3:21571934-21571953 | Msa0944620:CDS | 45.0% | |
| GAACAGACACTTCTGATGGA+AGG | + | chr6_3:21572040-21572059 | Msa0944620:intron | 45.0% | |
| ! | CTTCTGATGGAAGGTGTGTT+AGG | + | chr6_3:21572049-21572068 | Msa0944620:intron | 45.0% |
| TTTGAATGCAGACGATGGCA+TGG | + | chr6_3:21572126-21572145 | Msa0944620:intron | 45.0% | |
| ! | TGGTTTTCCTGTCACTACTG+CGG | - | chr6_3:21572189-21572208 | None:intergenic | 45.0% |
| ! | AAGGATCTTGGTGGATCTCT+AGG | + | chr6_3:21572294-21572313 | Msa0944620:intron | 45.0% |
| ! | TTGGACTAGAGACTCTGACT+AGG | + | chr6_3:21572487-21572506 | Msa0944620:intron | 45.0% |
| TGGTATTGCAACCTTGAACG+TGG | + | chr6_3:21572616-21572635 | Msa0944620:intron | 45.0% | |
| !!! | GTTTTGGAAATGTGGGGTCA+TGG | + | chr6_3:21572921-21572940 | Msa0944620:CDS | 45.0% |
| GTTCTTATACCTGCTGCTCT+TGG | + | chr6_3:21573133-21573152 | Msa0944620:CDS | 45.0% | |
| CTCTTGGTGGAGTCATCAAT+AGG | + | chr6_3:21573149-21573168 | Msa0944620:CDS | 45.0% | |
| ! | TGGATTGGAAGAAATCACGG+TGG | + | chr6_3:21573464-21573483 | Msa0944620:intron | 45.0% |
| GACAACACATCATTGAACGC+AGG | + | chr6_3:21574265-21574284 | Msa0944620:intron | 45.0% | |
| TTGCAGTTAACCGTGTAGCA+AGG | + | chr6_3:21574574-21574593 | Msa0944620:CDS | 45.0% | |
| TGCAGTTAACCGTGTAGCAA+GGG | + | chr6_3:21574575-21574594 | Msa0944620:CDS | 45.0% | |
| TCTAGAGGCCCTATGAAAGG+AGG | + | chr6_3:21571487-21571506 | Msa0944620:CDS | 50.0% | |
| CTAGAGGCCCTATGAAAGGA+GGG | + | chr6_3:21571488-21571507 | Msa0944620:CDS | 50.0% | |
| AGGGATCAGATACCATCCTG+AGG | + | chr6_3:21571507-21571526 | Msa0944620:CDS | 50.0% | |
| !! | TAAACTCACCTGGGTTGGTC+TGG | + | chr6_3:21571598-21571617 | Msa0944620:intron | 50.0% |
| GATTCTCCCCGATGCCAATT+TGG | + | chr6_3:21571672-21571691 | Msa0944620:intron | 50.0% | |
| AACCCACCCAAATTGGCATC+GGG | - | chr6_3:21571682-21571701 | None:intergenic | 50.0% | |
| !! | TTACCATATGGGGGTGCCAA+AGG | + | chr6_3:21571811-21571830 | Msa0944620:CDS | 50.0% |
| GTCAACCCCTATACCTCCTT+TGG | - | chr6_3:21571830-21571849 | None:intergenic | 50.0% | |
| TGTGGTCCTGTTCCCATATC+AGG | - | chr6_3:21571949-21571968 | None:intergenic | 50.0% | |
| TGATATGGGAACAGGACCAC+AGG | + | chr6_3:21571948-21571967 | Msa0944620:CDS | 50.0% | |
| ! | GGTTTTCCTGTCACTACTGC+GGG | - | chr6_3:21572188-21572207 | None:intergenic | 50.0% |
| CTAGGAAGAGATGCAGCTAC+AGG | + | chr6_3:21572312-21572331 | Msa0944620:CDS | 50.0% | |
| AGAGATGCAGCTACAGGAAG+AGG | + | chr6_3:21572318-21572337 | Msa0944620:CDS | 50.0% | |
| AGGTGTCCTCTTTGCAACTG+AGG | + | chr6_3:21572338-21572357 | Msa0944620:CDS | 50.0% | |
| GCAAAGCCTCAGTTGCAAAG+AGG | - | chr6_3:21572347-21572366 | None:intergenic | 50.0% | |
| CTTATACCTGCTGCTCTTGG+TGG | + | chr6_3:21573136-21573155 | Msa0944620:CDS | 50.0% | |
| ATCTGGGTCAGTTGGGTGAT+TGG | - | chr6_3:21573845-21573864 | None:intergenic | 50.0% | |
| CATCAGCATCTGGGTCAGTT+GGG | - | chr6_3:21573852-21573871 | None:intergenic | 50.0% | |
| TCATCAGCATCTGGGTCAGT+TGG | - | chr6_3:21573853-21573872 | None:intergenic | 50.0% | |
| AACTGACCCAGATGCTGATG+AGG | + | chr6_3:21573852-21573871 | Msa0944620:CDS | 50.0% | |
| ! | TAGCTACTTTGAGTGGGTCC+AGG | + | chr6_3:21574026-21574045 | Msa0944620:CDS | 50.0% |
| ! | TTCCCAACCTCTAAGGACAG+TGG | - | chr6_3:21574601-21574620 | None:intergenic | 50.0% |
| !!! | GGCCTCTAGGCTTTTGGGAT+TGG | + | chr6_3:21571020-21571039 | Msa0944620:CDS | 55.0% |
| !! | TTGGTCTGGTGGTGTTGGCT+TGG | + | chr6_3:21571612-21571631 | Msa0944620:intron | 55.0% |
| !! | TGGTCTGGTGGTGTTGGCTT+GGG | + | chr6_3:21571613-21571632 | Msa0944620:intron | 55.0% |
| TCCCCGATGCCAATTTGGGT+GGG | + | chr6_3:21571677-21571696 | Msa0944620:intron | 55.0% | |
| ACCCACCCAAATTGGCATCG+GGG | - | chr6_3:21571681-21571700 | None:intergenic | 55.0% | |
| ! | GGGGTGCCAAAGGAGGTATA+GGG | + | chr6_3:21571821-21571840 | Msa0944620:CDS | 55.0% |
| ! | GGGTGCCAAAGGAGGTATAG+GGG | + | chr6_3:21571822-21571841 | Msa0944620:CDS | 55.0% |
| CCTGTTCCCATATCAGGTGC+AGG | - | chr6_3:21571943-21571962 | None:intergenic | 55.0% | |
| CCTGCACCTGATATGGGAAC+AGG | + | chr6_3:21571940-21571959 | Msa0944620:CDS | 55.0% | |
| CTGTCACTACTGCGGGAGAA+TGG | - | chr6_3:21572181-21572200 | None:intergenic | 55.0% | |
| CATTCTCCCGCAGTAGTGAC+AGG | + | chr6_3:21572179-21572198 | Msa0944620:CDS | 55.0% | |
| ATGACTCCACCAAGAGCAGC+AGG | - | chr6_3:21573145-21573164 | None:intergenic | 55.0% | |
| GGCCACTGTCCTTAGAGGTT+GGG | + | chr6_3:21574596-21574615 | Msa0944620:CDS | 55.0% | |
| !! | ACTCACCTGGGTTGGTCTGG+TGG | + | chr6_3:21571601-21571620 | Msa0944620:intron | 60.0% |
| CAACACCACCAGACCAACCC+AGG | - | chr6_3:21571609-21571628 | None:intergenic | 60.0% | |
| !! | CTGGGTTGGTCTGGTGGTGT+TGG | + | chr6_3:21571607-21571626 | Msa0944620:intron | 60.0% |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | + | chr6_3:21571620-21571639 | Msa0944620:intron | 60.0% |
| CTCCCCGATGCCAATTTGGG+TGG | + | chr6_3:21571676-21571695 | Msa0944620:intron | 60.0% | |
| CCTCCTTTGGCACCCCCATA+TGG | - | chr6_3:21571817-21571836 | None:intergenic | 60.0% | |
| !! | CCATATGGGGGTGCCAAAGG+AGG | + | chr6_3:21571814-21571833 | Msa0944620:CDS | 60.0% |
| !! | GGGGGTGCCAAAGGAGGTAT+AGG | + | chr6_3:21571820-21571839 | Msa0944620:CDS | 60.0% |
| TGCGACTGCGACCACGTTCA+AGG | - | chr6_3:21572630-21572649 | None:intergenic | 60.0% | |
| GGACAGTGGCCCTTGCTACA+CGG | - | chr6_3:21574587-21574606 | None:intergenic | 60.0% | |
| GCAAGGGCCACTGTCCTTAG+AGG | + | chr6_3:21574591-21574610 | Msa0944620:CDS | 60.0% | |
| GGGCCACTGTCCTTAGAGGT+TGG | + | chr6_3:21574595-21574614 | Msa0944620:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 21570838 | 21574887 | 21570838 | ID=Msa0944620;Name=Msa0944620 |
| chr6_3 | mRNA | 21570838 | 21574887 | 21570838 | ID=Msa0944620-mRNA-1;Parent=Msa0944620;Name=Msa0944620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=144|1|1|1|0.88|0.8|10|238|411 |
| chr6_3 | exon | 21570838 | 21571089 | 21570838 | ID=Msa0944620-mRNA-1:exon:6413;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21571415 | 21571528 | 21571415 | ID=Msa0944620-mRNA-1:exon:6414;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21571748 | 21571969 | 21571748 | ID=Msa0944620-mRNA-1:exon:6415;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21572137 | 21572211 | 21572137 | ID=Msa0944620-mRNA-1:exon:6416;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21572297 | 21572413 | 21572297 | ID=Msa0944620-mRNA-1:exon:6417;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21572920 | 21573170 | 21572920 | ID=Msa0944620-mRNA-1:exon:6418;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21573798 | 21573873 | 21573798 | ID=Msa0944620-mRNA-1:exon:6419;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21573961 | 21574047 | 21573961 | ID=Msa0944620-mRNA-1:exon:6420;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21574441 | 21574785 | 21574441 | ID=Msa0944620-mRNA-1:exon:6421;Parent=Msa0944620-mRNA-1 |
| chr6_3 | exon | 21574809 | 21574887 | 21574809 | ID=Msa0944620-mRNA-1:exon:6422;Parent=Msa0944620-mRNA-1 |
| chr6_3 | five_prime_UTR | 21570838 | 21570981 | 21570838 | ID=Msa0944620-mRNA-1:five_prime_utr;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21570982 | 21571089 | 21570982 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21571415 | 21571528 | 21571415 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21571748 | 21571969 | 21571748 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21572137 | 21572211 | 21572137 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21572297 | 21572413 | 21572297 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21572920 | 21573170 | 21572920 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21573798 | 21573873 | 21573798 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21573961 | 21574047 | 21573961 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | CDS | 21574441 | 21574626 | 21574441 | ID=Msa0944620-mRNA-1:cds;Parent=Msa0944620-mRNA-1 |
| chr6_3 | three_prime_UTR | 21574627 | 21574785 | 21574627 | ID=Msa0944620-mRNA-1:three_prime_utr;Parent=Msa0944620-mRNA-1 |
| chr6_3 | three_prime_UTR | 21574809 | 21574887 | 21574809 | ID=Msa0944620-mRNA-1:three_prime_utr;Parent=Msa0944620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
