AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1077060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1077060 MtrunA17_Chr7g0261281 94.604 278 13 1 1 276 1 278 0.0 530
Msa1077060 MtrunA17_Chr1g0167661 47.038 287 108 9 1 276 1 254 4.17e-78 237
Msa1077060 MtrunA17_Chr1g0187761 46.209 277 129 4 1 276 1 258 6.77e-76 231
Msa1077060 MtrunA17_Chr1g0167691 47.163 282 116 5 1 276 1 255 1.06e-75 231
Msa1077060 MtrunA17_Chr7g0274581 74.167 120 31 0 1 120 1 120 8.18e-71 217
Msa1077060 MtrunA17_Chr4g0039971 76.271 118 28 0 1 118 2 119 1.19e-64 206
Msa1077060 MtrunA17_Chr2g0323411 75.000 116 29 0 1 116 1 116 1.96e-62 199
Msa1077060 MtrunA17_Chr8g0349261 54.040 198 67 7 1 183 1 189 2.66e-62 198
Msa1077060 MtrunA17_Chr8g0346561 63.158 133 49 0 1 133 1 133 7.35e-62 197
Msa1077060 MtrunA17_Chr1g0203411 69.672 122 37 0 1 122 1 122 2.71e-61 195
Msa1077060 MtrunA17_Chr3g0115821 54.878 164 73 1 1 163 1 164 6.56e-61 196
Msa1077060 MtrunA17_Chr7g0217741 71.552 116 33 0 1 116 1 116 8.68e-61 194
Msa1077060 MtrunA17_Chr4g0042671 73.276 116 31 0 1 116 1 116 1.59e-60 197
Msa1077060 MtrunA17_Chr2g0281071 72.650 117 31 1 1 116 1 117 2.27e-60 194
Msa1077060 MtrunA17_Chr4g0048511 71.795 117 32 1 1 116 1 117 1.19e-59 193
Msa1077060 MtrunA17_Chr7g0275911 66.393 122 40 1 1 122 1 121 2.43e-59 189
Msa1077060 MtrunA17_Chr3g0131121 65.414 133 40 1 1 127 1 133 9.43e-59 189
Msa1077060 MtrunA17_Chr6g0453471 69.828 116 35 0 1 116 1 116 3.10e-58 189
Msa1077060 MtrunA17_Chr3g0121241 44.298 228 103 4 5 208 35 262 1.51e-57 186
Msa1077060 MtrunA17_Chr5g0410961 69.828 116 35 0 1 116 1 116 1.70e-57 187
Msa1077060 MtrunA17_Chr4g0070611 63.158 133 48 1 1 132 1 133 3.52e-57 185
Msa1077060 MtrunA17_Chr4g0068061 67.241 116 38 0 1 116 1 116 3.82e-57 186
Msa1077060 MtrunA17_Chr4g0022931 65.891 129 43 1 1 128 1 129 5.55e-57 184
Msa1077060 MtrunA17_Chr4g0070641 63.158 133 48 1 1 132 1 133 1.38e-56 179
Msa1077060 MtrunA17_Chr4g0022901 40.794 277 141 7 1 260 1 271 1.47e-56 182
Msa1077060 MtrunA17_Chr5g0434571 50.267 187 79 3 1 181 37 215 1.90e-56 185
Msa1077060 MtrunA17_Chr5g0395281 67.797 118 38 0 1 118 1 118 2.21e-56 183
Msa1077060 MtrunA17_Chr3g0110351 69.828 116 35 0 1 116 1 116 4.11e-56 182
Msa1077060 MtrunA17_Chr4g0037141 54.717 159 58 2 1 145 1 159 5.99e-56 181
Msa1077060 MtrunA17_Chr7g0217221 39.344 244 138 3 1 235 1 243 6.18e-56 181
Msa1077060 MtrunA17_Chr2g0311221 70.000 110 33 0 2 111 4 113 1.23e-55 182
Msa1077060 MtrunA17_Chr4g0022911 64.122 131 44 2 1 128 1 131 1.87e-55 180
Msa1077060 MtrunA17_Chr4g0057031 68.966 116 36 0 1 116 1 116 3.14e-55 179
Msa1077060 MtrunA17_Chr2g0323351 62.595 131 49 0 1 131 1 131 3.98e-55 178
Msa1077060 MtrunA17_Chr7g0228891 61.314 137 53 0 1 137 1 137 1.35e-54 177
Msa1077060 MtrunA17_Chr4g0060721 61.667 120 46 0 1 120 2 121 1.40e-54 179
Msa1077060 MtrunA17_Chr7g0270891 66.949 118 39 0 1 118 1 118 1.83e-54 180
Msa1077060 MtrunA17_Chr1g0193801 66.102 118 40 0 1 118 1 118 7.72e-54 179
Msa1077060 MtrunA17_Chr8g0385321 66.379 116 39 0 1 116 1 116 2.44e-53 176
Msa1077060 MtrunA17_Chr7g0254411 64.655 116 41 0 1 116 1 116 3.78e-53 176
Msa1077060 MtrunA17_Chr3g0092401 62.931 116 43 0 1 116 2 117 1.36e-52 174
Msa1077060 MtrunA17_Chr4g0058631 64.655 116 41 0 1 116 1 116 4.09e-52 174
Msa1077060 MtrunA17_Chr1g0194951 63.793 116 42 0 1 116 1 116 7.10e-52 173
Msa1077060 MtrunA17_Chr1g0193371 63.866 119 43 0 1 119 1 119 1.08e-51 173
Msa1077060 MtrunA17_Chr4g0022891 65.487 113 39 0 1 113 1 113 1.65e-50 166
Msa1077060 MtrunA17_Chr6g0453211 63.964 111 40 0 1 111 1 111 2.60e-50 168
Msa1077060 MtrunA17_Chr3g0117091 63.793 116 42 0 1 116 1 116 4.76e-50 168
Msa1077060 MtrunA17_Chr1g0151941 59.829 117 46 1 1 116 1 117 9.40e-50 164
Msa1077060 MtrunA17_Chr4g0022881 63.158 114 42 0 1 114 1 114 1.65e-49 163
Msa1077060 MtrunA17_Chr5g0435101 56.911 123 53 0 3 125 2 124 1.80e-49 162
Msa1077060 MtrunA17_Chr3g0103281 62.069 116 44 0 1 116 1 116 1.00e-48 164
Msa1077060 MtrunA17_Chr7g0269831 65.517 116 40 0 1 116 1 116 1.29e-48 164
Msa1077060 MtrunA17_Chr7g0271241 64.815 108 38 0 1 108 1 108 2.79e-48 164
Msa1077060 MtrunA17_Chr1g0211161 62.281 114 43 0 3 116 4 117 3.68e-48 159
Msa1077060 MtrunA17_Chr5g0400821 50.641 156 63 2 1 155 1 143 3.99e-48 162
Msa1077060 MtrunA17_Chr2g0309911 61.261 111 43 0 6 116 5 115 5.13e-48 162
Msa1077060 MtrunA17_Chr6g0452271 58.621 116 48 0 1 116 1 116 1.36e-47 161
Msa1077060 MtrunA17_Chr2g0330041 59.483 116 47 0 1 116 1 116 1.69e-47 163
Msa1077060 MtrunA17_Chr4g0044421 58.065 124 51 1 3 125 2 125 1.78e-47 157
Msa1077060 MtrunA17_Chr3g0135311 55.303 132 58 1 1 131 1 132 5.20e-47 160
Msa1077060 MtrunA17_Chr1g0152011 59.829 117 46 1 1 116 1 117 8.91e-47 159
Msa1077060 MtrunA17_Chr8g0342541 57.759 116 49 0 1 116 1 116 9.25e-47 159
Msa1077060 MtrunA17_Chr5g0417821 65.421 107 37 0 10 116 5 111 1.68e-46 157
Msa1077060 MtrunA17_Chr8g0342521 57.759 116 49 0 1 116 1 116 3.11e-46 158
Msa1077060 MtrunA17_Chr4g0028311 59.829 117 46 1 1 116 1 117 6.43e-46 157
Msa1077060 MtrunA17_Chr8g0387421 56.897 116 50 0 1 116 1 116 1.77e-45 155
Msa1077060 MtrunA17_Chr6g0470971 40.175 229 116 5 4 224 6 221 2.40e-45 154
Msa1077060 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 7.24e-45 154
Msa1077060 MtrunA17_Chr6g0450101 55.906 127 54 1 1 125 1 127 2.27e-44 149
Msa1077060 MtrunA17_Chr6g0487491 49.032 155 63 3 1 139 1 155 3.06e-44 150
Msa1077060 MtrunA17_Chr7g0264641 54.098 122 55 1 1 121 1 122 4.60e-44 150
Msa1077060 MtrunA17_Chr5g0397231 60.185 108 43 0 1 108 1 108 5.99e-44 152
Msa1077060 MtrunA17_Chr2g0327351 60.360 111 43 1 1 110 1 111 8.89e-44 151
Msa1077060 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 2.80e-43 142
Msa1077060 MtrunA17_Chr8g0354661 63.462 104 38 0 12 115 37 140 3.47e-43 154
Msa1077060 MtrunA17_Chr4g0054391 56.154 130 56 1 1 129 1 130 3.75e-43 149
Msa1077060 MtrunA17_Chr8g0342481 56.410 117 50 1 1 116 1 117 3.95e-43 151
Msa1077060 MtrunA17_Chr1g0203441 58.120 117 48 1 1 116 1 117 9.18e-43 147
Msa1077060 MtrunA17_Chr4g0032401 61.905 105 40 0 12 116 17 121 1.03e-42 149
Msa1077060 MtrunA17_Chr7g0228231 61.682 107 41 0 12 118 14 120 1.53e-42 144
Msa1077060 MtrunA17_Chr5g0434911 56.364 110 48 0 7 116 16 125 3.91e-42 145
Msa1077060 MtrunA17_Chr2g0328771 60.952 105 41 0 12 116 20 124 4.77e-42 146
Msa1077060 MtrunA17_Chr5g0434931 58.491 106 44 0 11 116 34 139 5.51e-42 145
Msa1077060 MtrunA17_Chr1g0154031 61.538 104 40 0 12 115 76 179 5.63e-42 149
Msa1077060 MtrunA17_Chr3g0088461 61.111 108 42 0 9 116 19 126 6.80e-42 147
Msa1077060 MtrunA17_Chr1g0186061 59.223 103 42 0 13 115 21 123 1.09e-41 144
Msa1077060 MtrunA17_Chr3g0099131 57.265 117 46 1 12 124 41 157 1.25e-41 150
Msa1077060 MtrunA17_Chr1g0168661 60.194 103 41 0 13 115 22 124 1.73e-41 143
Msa1077060 MtrunA17_Chr4g0055981 55.462 119 53 0 9 127 52 170 2.01e-41 142
Msa1077060 MtrunA17_Chr7g0220341 35.622 233 140 4 10 234 23 253 2.74e-41 143
Msa1077060 MtrunA17_Chr1g0209661 60.748 107 42 0 12 118 27 133 3.76e-41 144
Msa1077060 MtrunA17_Chr3g0080861 31.698 265 149 2 12 276 37 269 4.13e-41 148
Msa1077060 MtrunA17_Chr5g0434831 59.434 106 43 0 11 116 6 111 7.91e-41 139
Msa1077060 MtrunA17_Chr2g0294811 64.130 92 33 0 1 92 1 92 1.55e-40 136
Msa1077060 MtrunA17_Chr8g0343831 61.165 103 40 0 14 116 10 112 2.25e-40 140
Msa1077060 MtrunA17_Chr8g0360111 59.804 102 41 0 11 112 24 125 2.71e-40 140
Msa1077060 MtrunA17_Chr1g0194291 57.407 108 46 0 11 118 20 127 3.62e-40 140
Msa1077060 MtrunA17_Chr1g0180391 50.350 143 65 2 12 151 19 158 6.21e-40 138
Msa1077060 MtrunA17_Chr7g0228991 57.547 106 45 0 11 116 28 133 1.18e-39 139
Msa1077060 MtrunA17_Chr1g0194301 50.407 123 61 0 8 130 29 151 1.41e-39 139
Msa1077060 MtrunA17_Chr7g0240821 60.000 100 40 0 17 116 6 105 1.77e-39 137
Msa1077060 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.79e-39 141
Msa1077060 MtrunA17_Chr5g0434841 57.547 106 45 0 11 116 19 124 1.02e-38 137
Msa1077060 MtrunA17_Chr7g0247131 76.712 73 17 0 44 116 10 82 3.15e-37 132
Msa1077060 MtrunA17_Chr4g0068921 59.048 105 43 0 10 114 22 126 1.80e-36 128
Msa1077060 MtrunA17_Chr2g0327821 41.250 160 88 1 12 165 6 165 4.76e-36 129
Msa1077060 MtrunA17_Chr5g0395221 62.500 88 33 0 1 88 1 88 1.59e-35 122
Msa1077060 MtrunA17_Chr2g0293911 55.856 111 49 0 8 118 20 130 1.78e-35 129
Msa1077060 MtrunA17_Chr4g0030881 50.435 115 50 1 13 120 8 122 5.37e-35 126
Msa1077060 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 7.31e-35 121
Msa1077060 MtrunA17_Chr1g0192411 51.887 106 51 0 10 115 10 115 1.57e-34 129
Msa1077060 MtrunA17_Chr8g0342511 57.471 87 37 0 1 87 1 87 4.58e-33 116
Msa1077060 MtrunA17_Chr8g0342531 58.333 84 35 0 6 89 6 89 1.26e-32 117
Msa1077060 MtrunA17_Chr8g0334881 50.000 106 51 2 12 116 10 114 2.82e-32 120
Msa1077060 MtrunA17_Chr4g0013361 42.857 126 70 2 8 132 6 130 4.64e-32 119
Msa1077060 MtrunA17_Chr5g0440781 48.544 103 52 1 13 114 13 115 1.35e-31 115
Msa1077060 MtrunA17_Chr3g0099141 57.831 83 35 0 12 94 40 122 4.17e-31 113
Msa1077060 MtrunA17_Chr5g0440761 48.544 103 52 1 13 114 13 115 7.06e-31 115
Msa1077060 MtrunA17_Chr5g0441141 48.544 103 52 1 13 114 13 115 7.66e-31 116
Msa1077060 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 1.59e-30 111
Msa1077060 MtrunA17_Chr8g0342471 54.444 90 40 1 1 89 1 90 6.55e-30 109
Msa1077060 MtrunA17_Chr5g0441131 47.573 103 53 1 13 114 10 112 1.82e-29 110
Msa1077060 MtrunA17_Chr4g0008551 50.485 103 48 2 14 115 38 138 1.27e-27 109
Msa1077060 MtrunA17_Chr6g0454921 48.148 108 55 1 8 115 9 115 1.36e-27 105
Msa1077060 MtrunA17_Chr3g0133601 47.664 107 55 1 9 115 32 137 1.36e-27 106
Msa1077060 MtrunA17_Chr7g0229101 65.714 70 24 0 44 113 4 73 2.50e-27 105
Msa1077060 MtrunA17_Chr7g0238631 50.476 105 51 1 12 116 111 214 5.40e-27 109
Msa1077060 MtrunA17_Chr7g0238631 36.000 100 62 2 14 112 61 159 1.80e-13 70.1
Msa1077060 MtrunA17_Chr5g0434901 66.667 66 22 0 48 113 9 74 8.53e-27 100
Msa1077060 MtrunA17_Chr4g0053431 48.113 106 46 2 14 115 5 105 1.38e-26 104
Msa1077060 MtrunA17_Chr3g0139671 47.619 105 54 1 12 116 83 186 1.49e-26 108
Msa1077060 MtrunA17_Chr3g0139671 37.000 100 61 2 14 112 33 131 1.31e-14 73.9
Msa1077060 MtrunA17_Chr7g0229131 53.409 88 41 0 44 131 4 91 4.00e-26 100
Msa1077060 MtrunA17_Chr1g0157731 47.619 105 54 1 12 116 89 192 5.05e-26 107
Msa1077060 MtrunA17_Chr1g0157731 37.000 100 61 2 14 112 39 137 3.18e-14 72.8
Msa1077060 MtrunA17_Chr5g0401731 49.020 102 51 1 14 115 15 115 6.32e-26 104
Msa1077060 MtrunA17_Chr4g0058991 32.099 243 142 8 8 236 203 436 1.98e-25 104
Msa1077060 MtrunA17_Chr3g0117511 37.241 145 85 3 8 152 177 315 5.12e-25 103
Msa1077060 MtrunA17_Chr5g0429661 43.443 122 57 3 12 132 120 230 5.26e-25 102
Msa1077060 MtrunA17_Chr7g0228531 29.297 256 140 6 10 265 216 430 5.67e-25 103
Msa1077060 MtrunA17_Chr6g0480581 46.535 101 53 1 14 114 4 103 1.45e-24 98.6
Msa1077060 MtrunA17_Chr5g0425591 48.780 82 41 1 13 93 10 91 2.47e-24 94.0
Msa1077060 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 1.16e-22 90.5
Msa1077060 MtrunA17_Chr5g0417621 41.176 119 63 3 14 131 134 246 1.59e-22 96.3
Msa1077060 MtrunA17_Chr3g0093811 54.667 75 34 0 44 118 14 88 1.23e-21 91.3
Msa1077060 MtrunA17_Chr7g0254261 28.696 230 144 8 14 235 89 306 1.74e-21 92.4
Msa1077060 MtrunA17_Chr6g0460671 38.931 131 72 3 14 144 99 221 2.03e-21 92.4
Msa1077060 MtrunA17_Chr4g0042501 43.689 103 55 2 14 115 105 205 2.37e-21 92.8
Msa1077060 MtrunA17_Chr5g0437321 44.444 99 54 1 14 112 19 116 5.04e-21 90.1
Msa1077060 MtrunA17_Chr5g0397841 47.423 97 50 1 12 108 108 203 5.48e-21 92.0
Msa1077060 MtrunA17_Chr7g0228481 41.176 119 67 3 10 128 216 331 1.63e-20 90.5
Msa1077060 MtrunA17_Chr6g0460661 40.496 121 67 2 14 134 16 131 3.77e-20 85.1
Msa1077060 MtrunA17_Chr3g0125801 33.889 180 108 4 14 190 16 187 8.39e-20 87.0
Msa1077060 MtrunA17_Chr7g0228401 44.186 86 47 1 25 110 290 374 3.99e-19 86.7
Msa1077060 MtrunA17_Chr5g0416341 36.029 136 85 2 17 151 29 163 3.89e-18 84.0
Msa1077060 MtrunA17_Chr7g0238651 39.604 101 59 1 17 115 10 110 4.16e-18 83.2
Msa1077060 MtrunA17_Chr1g0177901 42.529 87 49 1 24 110 4 89 5.66e-18 80.1
Msa1077060 MtrunA17_Chr7g0233061 37.931 116 54 4 14 120 180 286 3.11e-17 80.5
Msa1077060 MtrunA17_Chr7g0247141 62.500 48 17 1 1 47 1 48 1.04e-16 72.8
Msa1077060 MtrunA17_Chr5g0434871 67.442 43 14 0 74 116 2 44 5.16e-16 71.2
Msa1077060 MtrunA17_Chr8g0362231 38.384 99 60 1 17 115 25 122 3.64e-15 75.1
Msa1077060 MtrunA17_Chr1g0193901 48.276 58 29 1 12 68 11 68 6.79e-13 63.9
Msa1077060 MtrunA17_Chr1g0193891 48.276 58 29 1 12 68 11 68 6.79e-13 63.9
Msa1077060 MtrunA17_Chr1g0193871 48.276 58 29 1 12 68 11 68 6.79e-13 63.9
Msa1077060 MtrunA17_Chr1g0193881 48.276 58 29 1 12 68 11 68 6.79e-13 63.9
Msa1077060 MtrunA17_Chr2g0322831 58.974 39 16 0 70 108 34 72 1.17e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1077060 AT3G23250.1 49.488 293 118 8 1 274 1 282 3.73e-85 256
Msa1077060 AT2G31180.1 48.214 280 110 5 1 276 1 249 5.83e-82 247
Msa1077060 AT1G06180.1 51.711 263 91 8 1 262 1 228 1.66e-77 236
Msa1077060 AT3G02940.2 74.576 118 30 0 1 118 1 118 3.26e-64 204
Msa1077060 AT3G02940.1 74.576 118 30 0 1 118 1 118 8.27e-64 203
Msa1077060 AT3G02940.3 74.576 118 30 0 1 118 1 118 8.27e-64 203
Msa1077060 AT5G16770.4 45.418 251 121 6 1 239 1 247 1.38e-63 202
Msa1077060 AT5G16770.3 45.418 251 121 6 1 239 1 247 1.38e-63 202
Msa1077060 AT5G16770.1 45.418 251 121 6 1 239 1 247 2.41e-63 202
Msa1077060 AT5G16770.2 45.418 251 121 6 1 239 1 247 2.41e-63 202
Msa1077060 AT3G61250.1 73.276 116 31 0 1 116 1 116 3.07e-63 201
Msa1077060 AT1G16490.1 46.491 228 90 4 2 217 4 211 3.24e-63 200
Msa1077060 AT1G79180.1 72.034 118 33 0 2 119 4 121 1.60e-62 199
Msa1077060 AT4G05100.1 72.650 117 31 1 1 116 1 117 5.88e-61 196
Msa1077060 AT4G21440.1 70.690 116 34 0 1 116 1 116 7.70e-61 196
Msa1077060 AT1G56160.1 73.043 115 31 0 2 116 4 118 1.76e-60 194
Msa1077060 AT4G28110.1 70.690 116 34 0 1 116 1 116 5.57e-60 192
Msa1077060 AT5G16600.1 51.337 187 72 3 1 175 1 180 1.07e-58 190
Msa1077060 AT3G01140.2 65.152 132 41 1 1 127 1 132 1.07e-58 191
Msa1077060 AT5G15310.1 69.828 116 35 0 1 116 1 116 2.59e-58 189
Msa1077060 AT5G15310.2 69.828 116 35 0 1 116 1 116 3.04e-58 189
Msa1077060 AT5G15310.4 69.828 116 35 0 1 116 1 116 3.17e-58 186
Msa1077060 AT5G10280.1 68.644 118 37 0 1 118 1 118 4.68e-58 189
Msa1077060 AT5G65230.1 69.492 118 36 0 1 118 1 118 2.92e-57 186
Msa1077060 AT4G12350.1 70.690 116 34 0 1 116 1 116 5.21e-57 184
Msa1077060 AT2G16720.1 52.410 166 67 2 1 154 1 166 9.61e-57 183
Msa1077060 AT3G13540.1 67.257 113 37 0 4 116 15 127 9.90e-57 182
Msa1077060 AT4G22680.1 69.828 116 35 0 1 116 1 116 1.05e-56 183
Msa1077060 AT1G34670.1 68.644 118 37 0 1 118 1 118 1.71e-56 186
Msa1077060 AT4G09460.1 57.432 148 56 2 1 142 1 147 3.05e-56 181
Msa1077060 AT5G49330.1 67.241 116 38 0 1 116 1 116 3.70e-56 184
Msa1077060 AT1G22640.1 65.517 116 40 0 1 116 1 116 4.58e-56 181
Msa1077060 AT1G66230.1 69.828 116 35 0 1 116 1 116 5.32e-56 182
Msa1077060 AT3G01140.1 63.636 132 43 1 1 127 44 175 1.21e-55 184
Msa1077060 AT1G79180.2 56.291 151 33 1 2 119 4 154 1.25e-55 182
Msa1077060 AT3G62610.1 68.966 116 36 0 1 116 1 116 1.29e-55 182
Msa1077060 AT4G38620.1 66.379 116 39 0 1 116 1 116 2.21e-55 180
Msa1077060 AT3G12820.1 70.175 114 34 0 3 116 5 118 4.82e-55 178
Msa1077060 AT1G35515.1 64.655 116 41 0 1 116 1 116 8.45e-55 176
Msa1077060 AT1G08810.1 64.655 116 41 0 1 116 1 116 1.29e-54 178
Msa1077060 AT5G62470.2 64.655 116 41 0 1 116 1 116 2.32e-54 179
Msa1077060 AT1G74650.1 65.517 116 40 0 1 116 1 116 2.61e-54 179
Msa1077060 AT5G60890.1 55.333 150 62 1 1 145 1 150 3.11e-54 177
Msa1077060 AT2G47460.1 66.379 116 39 0 1 116 1 116 6.78e-54 179
Msa1077060 AT4G34990.1 67.241 116 38 0 1 116 1 116 8.71e-54 176
Msa1077060 AT3G47600.1 63.793 116 42 0 1 116 1 116 2.12e-53 177
Msa1077060 AT5G62470.1 64.655 116 40 1 1 116 1 115 5.43e-53 176
Msa1077060 AT3G28910.1 64.655 116 41 0 1 116 1 116 8.70e-53 175
Msa1077060 AT1G18570.1 65.812 117 39 1 1 116 1 117 1.35e-52 175
Msa1077060 AT5G61420.2 66.379 116 39 0 1 116 1 116 2.49e-52 175
Msa1077060 AT5G07690.1 66.379 116 39 0 1 116 1 116 5.28e-52 173
Msa1077060 AT4G01680.3 64.655 116 41 0 1 116 1 116 9.70e-52 169
Msa1077060 AT4G17785.2 63.866 119 42 1 1 118 1 119 1.12e-51 172
Msa1077060 AT4G17785.1 63.866 119 42 1 1 118 1 119 1.41e-51 172
Msa1077060 AT1G74080.1 64.655 116 41 0 1 116 1 116 2.83e-51 171
Msa1077060 AT4G01680.1 64.655 116 41 0 1 116 1 116 3.40e-51 171
Msa1077060 AT5G14340.1 56.643 143 51 1 1 132 13 155 3.52e-51 169
Msa1077060 AT1G09540.1 62.712 118 44 0 1 118 1 118 4.69e-51 171
Msa1077060 AT5G07700.1 50.000 174 80 2 1 168 1 173 1.32e-50 169
Msa1077060 AT5G07700.2 50.000 174 80 2 1 168 1 173 1.32e-50 169
Msa1077060 AT5G54230.1 63.793 116 42 0 1 116 1 116 2.45e-50 168
Msa1077060 AT1G57560.2 50.299 167 66 4 1 150 1 167 4.70e-50 166
Msa1077060 AT1G57560.1 62.069 116 44 0 1 116 1 116 6.02e-50 167
Msa1077060 AT5G26660.1 63.793 116 42 0 1 116 1 116 1.11e-49 167
Msa1077060 AT5G62320.1 53.061 147 57 2 2 136 3 149 1.55e-49 164
Msa1077060 AT3G13890.2 60.345 116 46 0 1 116 1 116 6.81e-49 166
Msa1077060 AT4G37780.1 58.678 121 49 1 1 120 1 121 9.46e-49 164
Msa1077060 AT5G56110.1 62.069 116 44 0 1 116 1 116 1.18e-48 164
Msa1077060 AT5G57620.1 59.200 125 50 1 1 124 1 125 1.65e-48 164
Msa1077060 AT4G01680.2 58.594 128 41 1 1 116 1 128 1.27e-47 162
Msa1077060 AT3G49690.1 59.350 123 49 1 1 122 1 123 1.83e-47 160
Msa1077060 AT5G65790.1 59.350 123 49 1 1 122 1 123 3.15e-47 162
Msa1077060 AT5G14750.1 62.500 104 39 0 13 116 17 120 8.10e-47 155
Msa1077060 AT5G35550.1 60.684 117 46 0 12 128 14 130 1.13e-46 157
Msa1077060 AT5G40330.1 60.550 109 43 0 13 121 13 121 1.62e-46 155
Msa1077060 AT5G23000.1 58.974 117 47 1 1 116 1 117 2.43e-46 158
Msa1077060 AT3G13890.1 56.000 125 46 1 1 116 1 125 7.77e-46 158
Msa1077060 AT1G63910.1 54.472 123 56 0 1 123 1 123 9.53e-46 158
Msa1077060 AT3G12720.1 57.658 111 47 0 6 116 16 126 1.37e-45 155
Msa1077060 AT1G74430.1 55.303 132 54 1 1 127 1 132 2.87e-45 154
Msa1077060 AT2G32460.1 58.824 119 45 1 8 122 14 132 1.33e-44 157
Msa1077060 AT2G36890.1 59.829 117 46 1 1 116 1 117 1.73e-44 152
Msa1077060 AT2G32460.2 59.483 116 43 1 11 122 5 120 2.38e-44 156
Msa1077060 AT2G36890.2 59.829 117 46 1 1 116 42 158 2.99e-44 153
Msa1077060 AT3G27920.1 45.513 156 85 0 13 168 15 170 9.52e-44 149
Msa1077060 AT1G18710.1 58.475 118 49 0 1 118 1 118 1.38e-43 149
Msa1077060 AT3G28470.1 56.364 110 48 0 1 110 1 110 2.14e-43 150
Msa1077060 AT5G40350.1 41.089 202 103 4 12 209 17 206 2.82e-43 147
Msa1077060 AT3G08500.1 62.037 108 41 0 9 116 27 134 1.76e-42 149
Msa1077060 AT3G27810.1 60.185 108 43 0 12 119 20 127 2.45e-42 145
Msa1077060 AT5G06100.1 59.048 105 43 0 11 115 31 135 2.81e-42 150
Msa1077060 AT5G12870.1 61.905 105 40 0 12 116 18 122 5.97e-42 145
Msa1077060 AT3G48920.1 58.182 110 46 0 13 122 19 128 8.07e-42 144
Msa1077060 AT3G24310.1 58.772 114 45 1 11 122 17 130 1.09e-41 144
Msa1077060 AT5G06100.5 59.048 105 43 0 11 115 31 135 1.19e-41 150
Msa1077060 AT5G06100.2 59.048 105 43 0 11 115 31 135 1.19e-41 150
Msa1077060 AT5G06100.3 59.048 105 43 0 11 115 31 135 1.19e-41 150
Msa1077060 AT5G06100.4 59.048 105 43 0 11 115 31 135 1.19e-41 150
Msa1077060 AT3G30210.1 46.575 146 72 1 11 156 26 165 1.38e-41 144
Msa1077060 AT3G23250.2 41.702 235 107 9 59 274 2 225 1.43e-41 143
Msa1077060 AT4G13480.1 62.136 103 39 0 13 115 7 109 1.50e-41 144
Msa1077060 AT3G01530.1 57.798 109 46 0 8 116 21 129 2.43e-41 142
Msa1077060 AT5G52600.1 57.692 104 44 0 12 115 12 115 8.24e-41 140
Msa1077060 AT1G66370.1 56.522 115 46 1 1 115 1 111 1.18e-40 141
Msa1077060 AT4G26930.1 59.223 103 42 0 12 114 19 121 1.71e-40 144
Msa1077060 AT5G55020.1 60.748 107 42 0 12 118 26 132 2.18e-40 147
Msa1077060 AT3G11440.2 56.731 104 45 0 12 115 41 144 5.77e-40 144
Msa1077060 AT2G47190.1 56.731 104 45 0 12 115 20 123 1.61e-39 139
Msa1077060 AT3G11440.3 56.731 104 45 0 12 115 41 144 1.95e-39 144
Msa1077060 AT3G11440.4 56.731 104 45 0 12 115 41 144 1.95e-39 144
Msa1077060 AT3G11440.1 56.731 104 45 0 12 115 41 144 1.95e-39 144
Msa1077060 AT4G25560.1 57.407 108 46 0 13 120 11 118 8.03e-39 137
Msa1077060 AT1G25340.1 58.491 106 44 0 13 118 19 124 1.80e-38 136
Msa1077060 AT2G26960.1 55.660 106 47 0 9 114 17 122 2.04e-38 140
Msa1077060 AT1G68320.1 57.018 114 49 0 12 125 19 132 2.75e-38 136
Msa1077060 AT3G46130.1 55.238 105 47 0 11 115 8 112 6.66e-38 134
Msa1077060 AT5G59780.3 55.340 103 46 0 13 115 9 111 1.23e-37 133
Msa1077060 AT5G52260.1 58.333 108 45 0 13 120 13 120 4.25e-37 132
Msa1077060 AT1G56650.1 60.952 105 41 0 11 115 7 111 5.92e-37 131
Msa1077060 AT1G66380.1 60.000 105 42 0 11 115 7 111 6.02e-37 128
Msa1077060 AT1G48000.1 55.340 103 46 0 12 114 32 134 6.58e-37 131
Msa1077060 AT3G06490.1 58.559 111 46 0 8 118 15 125 2.34e-36 132
Msa1077060 AT3G53200.1 55.769 104 46 0 12 115 9 112 2.54e-36 129
Msa1077060 AT5G49620.1 56.757 111 48 0 8 118 22 132 2.65e-35 129
Msa1077060 AT3G12820.2 78.571 70 15 0 47 116 1 70 2.73e-35 125
Msa1077060 AT5G14750.3 69.231 78 21 1 39 116 12 86 3.85e-35 124
Msa1077060 AT1G66390.1 59.048 105 43 0 11 115 7 111 4.35e-35 127
Msa1077060 AT1G25340.2 55.660 106 42 1 13 118 19 119 3.93e-34 125
Msa1077060 AT1G25340.3 55.660 106 42 1 13 118 19 119 7.82e-34 125
Msa1077060 AT5G35550.2 65.476 84 29 0 45 128 50 133 1.07e-33 123
Msa1077060 AT5G26660.2 71.622 74 21 0 43 116 12 85 1.58e-32 122
Msa1077060 AT3G60460.1 47.414 116 59 2 7 121 6 120 5.19e-32 120
Msa1077060 AT5G49620.2 50.400 125 48 1 8 118 22 146 9.32e-32 120
Msa1077060 AT2G26950.1 39.521 167 90 3 9 164 13 179 5.02e-31 119
Msa1077060 AT3G47600.2 68.056 72 23 0 45 116 39 110 2.59e-29 113
Msa1077060 AT5G40350.2 38.462 169 88 4 45 209 5 161 6.95e-29 108
Msa1077060 AT3G27810.2 62.667 75 28 0 45 119 4 78 1.43e-28 107
Msa1077060 AT3G53200.2 63.014 73 27 0 43 115 7 79 1.93e-27 105
Msa1077060 AT5G02320.1 41.429 140 77 2 12 151 125 259 3.45e-27 110
Msa1077060 AT5G02320.1 35.577 104 65 2 10 112 71 173 9.85e-14 71.2
Msa1077060 AT5G02320.2 41.429 140 77 2 12 151 125 259 3.45e-27 110
Msa1077060 AT5G02320.2 35.577 104 65 2 10 112 71 173 9.85e-14 71.2
Msa1077060 AT5G02320.3 41.429 140 77 2 12 151 65 199 4.29e-27 109
Msa1077060 AT5G02320.3 35.577 104 65 2 10 112 11 113 1.26e-13 70.9
Msa1077060 AT3G46130.3 62.500 72 27 0 44 115 9 80 6.99e-27 104
Msa1077060 AT5G59780.2 61.644 73 28 0 43 115 18 90 1.12e-26 103
Msa1077060 AT3G46130.4 61.644 73 28 0 43 115 18 90 1.37e-26 104
Msa1077060 AT3G09370.3 40.476 168 86 3 12 166 141 307 1.51e-26 108
Msa1077060 AT3G09370.3 37.000 100 61 2 14 112 91 189 1.18e-13 70.9
Msa1077060 AT3G09370.2 40.476 168 86 3 12 166 133 299 1.64e-26 108
Msa1077060 AT3G09370.2 37.000 100 61 2 14 112 83 181 1.15e-13 71.2
Msa1077060 AT3G09370.1 40.476 168 86 3 12 166 128 294 1.71e-26 108
Msa1077060 AT3G09370.1 37.000 100 61 2 14 112 78 176 1.19e-13 70.9
Msa1077060 AT3G09230.1 47.664 107 47 2 14 116 55 156 4.83e-26 105
Msa1077060 AT4G18770.1 44.954 109 59 1 8 116 211 318 5.06e-26 106
Msa1077060 AT5G11510.3 47.706 109 48 2 12 116 79 182 6.60e-26 107
Msa1077060 AT5G11510.3 37.000 100 61 2 14 112 29 127 6.25e-15 75.1
Msa1077060 AT5G11510.1 47.706 109 48 2 12 116 79 182 6.60e-26 107
Msa1077060 AT5G11510.1 37.000 100 61 2 14 112 29 127 6.25e-15 75.1
Msa1077060 AT5G11510.4 47.706 109 48 2 12 116 79 182 6.60e-26 107
Msa1077060 AT5G11510.4 37.000 100 61 2 14 112 29 127 6.25e-15 75.1
Msa1077060 AT5G11510.2 47.706 109 48 2 12 116 79 182 8.06e-26 107
Msa1077060 AT5G11510.2 37.000 100 61 2 14 112 29 127 6.05e-15 75.1
Msa1077060 AT5G11510.5 47.706 109 48 2 12 116 79 182 8.68e-26 107
Msa1077060 AT5G11510.5 37.000 100 61 2 14 112 29 127 6.51e-15 75.1
Msa1077060 AT2G23290.1 49.020 102 51 1 14 115 13 113 2.41e-25 102
Msa1077060 AT1G71030.1 42.742 124 54 4 35 150 4 118 5.73e-25 99.0
Msa1077060 AT3G55730.1 39.726 146 75 3 14 151 56 196 7.44e-25 102
Msa1077060 AT2G39880.1 47.170 106 47 2 14 115 50 150 7.57e-25 102
Msa1077060 AT1G22640.3 70.690 58 17 0 59 116 2 59 8.75e-25 98.6
Msa1077060 AT1G66380.3 65.278 72 25 0 44 115 7 78 1.06e-24 95.5
Msa1077060 AT3G50060.1 46.078 102 54 1 14 115 6 106 1.15e-24 100
Msa1077060 AT5G14750.4 67.797 59 19 0 58 116 1 59 1.37e-24 96.3
Msa1077060 AT5G14750.2 67.797 59 19 0 58 116 1 59 1.37e-24 96.3
Msa1077060 AT1G71030.2 45.370 108 43 3 51 150 5 104 1.77e-24 97.4
Msa1077060 AT1G69560.1 40.310 129 70 3 9 136 102 224 2.06e-24 100
Msa1077060 AT1G69560.2 40.310 129 70 3 9 136 118 240 2.10e-24 100
Msa1077060 AT4G37260.1 44.144 111 61 1 5 115 4 113 3.24e-24 99.8
Msa1077060 AT1G17950.1 45.283 106 57 1 10 115 1 105 4.77e-24 97.8
Msa1077060 AT3G27785.1 45.545 101 54 1 8 108 183 282 4.78e-24 100
Msa1077060 AT4G32730.1 44.762 105 57 1 12 116 85 188 8.02e-24 101
Msa1077060 AT4G32730.1 36.000 100 62 2 14 112 35 133 1.21e-14 74.3
Msa1077060 AT4G32730.5 44.762 105 57 1 12 116 85 188 8.08e-24 101
Msa1077060 AT4G32730.5 36.000 100 62 2 14 112 35 133 1.28e-14 74.3
Msa1077060 AT4G32730.4 44.762 105 57 1 12 116 85 188 8.08e-24 101
Msa1077060 AT4G32730.4 36.000 100 62 2 14 112 35 133 1.28e-14 74.3
Msa1077060 AT4G32730.3 44.762 105 57 1 12 116 85 188 8.08e-24 101
Msa1077060 AT4G32730.3 36.000 100 62 2 14 112 35 133 1.28e-14 74.3
Msa1077060 AT4G32730.2 44.762 105 57 1 12 116 85 188 8.08e-24 101
Msa1077060 AT4G32730.2 36.000 100 62 2 14 112 35 133 1.28e-14 74.3
Msa1077060 AT1G26780.1 42.149 121 63 3 12 131 96 210 1.36e-23 97.4
Msa1077060 AT5G40360.1 40.678 118 62 3 12 129 156 265 1.51e-23 98.6
Msa1077060 AT1G26780.2 40.833 120 66 2 12 131 96 210 1.54e-23 98.6
Msa1077060 AT5G67300.1 46.078 102 54 1 14 115 6 106 1.97e-23 97.4
Msa1077060 AT5G58850.1 41.441 111 64 1 12 122 103 212 5.92e-23 97.8
Msa1077060 AT1G66380.2 54.878 82 37 0 11 92 7 88 6.77e-23 90.9
Msa1077060 AT5G11050.1 32.836 201 118 5 14 213 105 289 1.44e-22 96.7
Msa1077060 AT4G33450.1 41.026 117 63 2 3 119 13 123 1.59e-22 94.0
Msa1077060 AT1G18960.1 43.636 110 59 2 14 123 10 116 1.67e-22 94.7
Msa1077060 AT1G73410.1 48.113 106 52 2 14 118 6 109 5.42e-22 92.4
Msa1077060 AT1G73410.2 48.113 106 52 2 14 118 6 109 1.86e-21 89.7
Msa1077060 AT3G29020.1 40.000 105 62 1 14 118 65 168 2.20e-21 90.5
Msa1077060 AT3G29020.2 40.000 105 62 1 14 118 67 170 5.54e-21 90.9
Msa1077060 AT5G17800.1 40.367 109 64 1 14 122 93 200 7.17e-21 90.9
Msa1077060 AT2G37630.1 25.735 272 170 7 17 265 7 269 1.28e-18 85.1
Msa1077060 AT4G00540.2 41.818 110 60 2 12 118 101 209 1.49e-18 85.1
Msa1077060 AT4G00540.2 36.449 107 60 3 14 112 46 152 1.61e-12 67.4
Msa1077060 AT4G00540.1 41.818 110 60 2 12 118 99 207 2.75e-18 84.3
Msa1077060 AT4G00540.1 36.449 107 60 3 14 112 44 150 2.90e-12 66.6
Msa1077060 AT5G39700.1 40.625 96 56 1 15 110 57 151 3.40e-17 78.2
Msa1077060 AT2G25230.1 40.517 116 64 4 7 121 19 130 3.45e-17 79.0
Msa1077060 AT1G14350.2 34.559 136 83 2 17 152 28 157 7.32e-17 80.5
Msa1077060 AT1G14350.1 34.559 136 83 2 17 152 28 157 7.32e-17 80.5
Msa1077060 AT2G02820.3 39.394 99 59 1 17 115 33 130 1.09e-16 79.0
Msa1077060 AT2G02820.1 39.394 99 59 1 17 115 33 130 1.86e-16 79.3
Msa1077060 AT2G02820.2 39.394 99 59 1 17 115 33 130 2.35e-16 79.0
Msa1077060 AT4G25560.2 60.000 50 20 0 71 120 3 52 1.94e-14 71.2
Msa1077060 AT5G40430.1 33.333 114 72 3 7 120 47 156 2.92e-13 68.6
Msa1077060 AT5G59780.1 58.696 46 19 0 70 115 1 46 7.69e-13 65.5
Msa1077060 AT3G46130.2 58.696 46 19 0 70 115 1 46 1.22e-12 65.5
Msa1077060 AT1G16490.2 75.000 40 8 1 77 116 12 49 1.46e-12 65.5
Msa1077060 AT3G18100.1 31.783 129 82 2 13 141 545 667 3.66e-11 63.9
Msa1077060 AT3G18100.3 31.783 129 82 2 13 141 497 619 4.02e-11 63.5
Msa1077060 AT3G18100.4 31.783 129 82 2 13 141 384 506 4.78e-11 63.5
Msa1077060 AT1G74650.3 66.667 39 13 0 78 116 2 40 5.58e-11 62.0
Msa1077060 AT3G18100.2 31.783 129 82 2 13 141 332 454 5.59e-11 63.2
Msa1077060 AT3G28910.2 59.574 47 18 1 78 123 2 48 7.08e-11 61.6
Msa1077060 AT1G14350.3 35.052 97 58 1 56 152 23 114 9.39e-11 62.0
Msa1077060 AT1G14350.4 35.052 97 58 1 56 152 23 114 9.39e-11 62.0

Find 59 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCAAAACAACACATAATT+TGG 0.122967 7_2:+75623788 Msa1077060:five_prime_UTR
ATTTATTAGTTACTACAAAA+TGG 0.214423 7_2:+75623811 Msa1077060:exon
ATCCAAATTATGTGTTGTTT+TGG 0.230063 7_2:-75623790 None:intergenic
AGCTCCATGCTGTGAGAAAA+TGG 0.244008 7_2:+75623838 Msa1077060:CDS
TATTGCGTCCTCTTCTTCTT+TGG 0.246356 7_2:-75624178 None:intergenic
TTTGTTCCTGTTTGGTGTCT+TGG 0.278621 7_2:-75625317 None:intergenic
TTTGGTGTCTTGGTCTGAAT+TGG 0.308015 7_2:-75625307 None:intergenic
TGCATCAAATGTTGGGAAAC+AGG 0.310941 7_2:+75624208 Msa1077060:CDS
CTTGTTATTCCTAGATTGTA+TGG 0.311820 7_2:+75625743 Msa1077060:three_prime_UTR
ACTCCTTCTTCTCTTCCTAA+TGG 0.323610 7_2:-75625591 None:intergenic
ATTGAGTTTATGCCAAGATA+TGG 0.347920 7_2:+75625629 Msa1077060:CDS
ATCAATTTGCATCAAATGTT+GGG 0.356250 7_2:+75624201 Msa1077060:CDS
ATCAATCACATAAACACTTA+TGG 0.369204 7_2:+75623905 Msa1077060:CDS
TATCAATTTCAAGCTCCATT+AGG 0.389807 7_2:+75625576 Msa1077060:CDS
TAATAATGATGTTGTTGATT+CGG 0.397602 7_2:+75625449 Msa1077060:CDS
AATCAATTTGCATCAAATGT+TGG 0.410701 7_2:+75624200 Msa1077060:CDS
TATGCCAAGATATGGACTTC+TGG 0.412631 7_2:+75625637 Msa1077060:CDS
AAAATTGTACCAGCTTGTTT+GGG 0.417453 7_2:-75623950 None:intergenic
AAGTTACCCCGCTTGATATC+CGG 0.423140 7_2:-75624153 None:intergenic
AACAAAATCATGAAGATGAT+AGG 0.428670 7_2:+75625334 Msa1077060:CDS
AAAATGCCAACTTGATCAAA+AGG 0.437301 7_2:-75623726 None:intergenic
GCTCCATGCTGTGAGAAAAT+GGG 0.439252 7_2:+75623839 Msa1077060:CDS
CATTGAGACAAATGGTGTTA+TGG 0.440840 7_2:+75625536 Msa1077060:CDS
ACACTTATGGTCATTCCAAT+TGG 0.447001 7_2:+75623918 Msa1077060:CDS
TTTATTAGTTACTACAAAAT+GGG 0.447659 7_2:+75623812 Msa1077060:exon
GGCACACCCATTTGAAGAAA+AGG 0.451156 7_2:+75625202 Msa1077060:CDS
TTTGGGAAGAGCACGCCAAT+TGG 0.452512 7_2:-75623933 None:intergenic
ATACAAGTTCCATACAATCT+AGG 0.460971 7_2:-75625752 None:intergenic
GAGAAAATGGGGTTGAAGAA+AGG 0.466929 7_2:+75623851 Msa1077060:CDS
ACTATTGCAGCAAGGTTACC+TGG 0.477392 7_2:+75625150 Msa1077060:CDS
GGTGTCTTGGTCTGAATTGG+AGG 0.483617 7_2:-75625304 None:intergenic
ATCTCGTTATCTGTTCGTCC+AGG 0.484538 7_2:-75625168 None:intergenic
GAACTTGTATGCTCATTCAA+TGG 0.487379 7_2:+75625765 Msa1077060:three_prime_UTR
TACTGTTGTTGTGTTCATGT+TGG 0.490636 7_2:-75625236 None:intergenic
CGATCTTCTTCTGTAGTCCA+TGG 0.493447 7_2:-75623875 None:intergenic
AGAAAATGGGGTTGAAGAAA+GGG 0.495895 7_2:+75623852 Msa1077060:CDS
CGTGCCAGAAGTCCATATCT+TGG 0.502555 7_2:-75625641 None:intergenic
TGCTTAGATGCAGAAAATGT+AGG 0.502654 7_2:-75625850 None:intergenic
TTCAGACCAAGACACCAAAC+AGG 0.504694 7_2:+75625311 Msa1077060:CDS
AATTCTAGCATTGAGACAAA+TGG 0.516171 7_2:+75625528 Msa1077060:CDS
CGTGCTCTTCCCAAACAAGC+TGG 0.545911 7_2:+75623941 Msa1077060:CDS
GCAGAAAATGTAGGCAAATG+TGG 0.546907 7_2:-75625841 None:intergenic
TCAACAGGATTGCTAAGGTG+TGG 0.554823 7_2:+75624093 Msa1077060:intron
GCTCCATTAGGAAGAGAAGA+AGG 0.561056 7_2:+75625588 Msa1077060:CDS
ATGGGCAAATTATCTGAAGC+CGG 0.572774 7_2:+75624134 Msa1077060:CDS
TCTGAAGCCGGATATCAAGC+GGG 0.573369 7_2:+75624146 Msa1077060:CDS
AAAGAGTTGCAGATTGCGAT+GGG 0.587500 7_2:+75624116 Msa1077060:CDS
TGGGGTTGAAGAAAGGGCCA+TGG 0.599615 7_2:+75623858 Msa1077060:CDS
ATCTGAAGCCGGATATCAAG+CGG 0.604099 7_2:+75624145 Msa1077060:CDS
GTCGACATGAAAGTCCAACT+TGG 0.605781 7_2:-75625280 None:intergenic
TAACTTCACCAAAGAAGAAG+AGG 0.612072 7_2:+75624170 Msa1077060:CDS
GAAAGAGTTGCAGATTGCGA+TGG 0.612569 7_2:+75624115 Msa1077060:CDS
ACAAATGGTGTTATGGACAT+TGG 0.642021 7_2:+75625543 Msa1077060:CDS
CTCCATGCTGTGAGAAAATG+GGG 0.664474 7_2:+75623840 Msa1077060:CDS
CGATGTTTATGCGAGAGCTG+AGG 0.668356 7_2:+75625662 Msa1077060:CDS
AAGTGTTTATGTGATTGATG+AGG 0.675801 7_2:-75623901 None:intergenic
CTGAAGCCGGATATCAAGCG+GGG 0.683628 7_2:+75624147 Msa1077060:CDS
GATGGTCAACTATTGCAGCA+AGG 0.684333 7_2:+75625142 Msa1077060:intron
GAAAATGTAGGCAAATGTGG+AGG 0.717803 7_2:-75625838 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTCTTTAAATTAGTAA+AGG - chr7_2:75623988-75624007 None:intergenic 10.0%
!!! TTTTTTTTTAAGGAAATTAA+AGG - chr7_2:75624597-75624616 None:intergenic 10.0%
!!! CTCTTTTTTTTTTTTTTTTA+AGG - chr7_2:75624607-75624626 None:intergenic 10.0%
!!! CTTTAAAAAAAAAAAAAAAG+TGG - chr7_2:75624809-75624828 None:intergenic 10.0%
!!! AAAACATTTTTATTTTACTT+AGG - chr7_2:75625028-75625047 None:intergenic 10.0%
!!! AATTTTCTTTAAATTAGTAA+AGG - chr7_2:75623988-75624007 None:intergenic 10.0%
!!! TTTTTTTTTAAGGAAATTAA+AGG - chr7_2:75624597-75624616 None:intergenic 10.0%
!!! CTCTTTTTTTTTTTTTTTTA+AGG - chr7_2:75624607-75624626 None:intergenic 10.0%
!!! CTTTAAAAAAAAAAAAAAAG+TGG - chr7_2:75624809-75624828 None:intergenic 10.0%
!!! AAAACATTTTTATTTTACTT+AGG - chr7_2:75625028-75625047 None:intergenic 10.0%
!! ATTTATTAGTTACTACAAAA+TGG + chr7_2:75623811-75623830 Msa1077060:exon 15.0%
!! TTTATTAGTTACTACAAAAT+GGG + chr7_2:75623812-75623831 Msa1077060:exon 15.0%
!! AAAAAAAATGAGAAAAACTT+TGG - chr7_2:75624063-75624082 None:intergenic 15.0%
!!! TTTTTTACAATTTTATCAAC+AGG + chr7_2:75624078-75624097 Msa1077060:intron 15.0%
!! AAAAAAGAGAAAATGAATAA+TGG + chr7_2:75624618-75624637 Msa1077060:intron 15.0%
!!! TTGATTTATCTTTAGTTTTA+AGG + chr7_2:75624657-75624676 Msa1077060:intron 15.0%
!!! TGATTTATCTTTAGTTTTAA+GGG + chr7_2:75624658-75624677 Msa1077060:intron 15.0%
!! TATTATTAACAATTGTGATA+TGG + chr7_2:75624875-75624894 Msa1077060:intron 15.0%
!!! AAATGTTTTTTGTCTAATTT+TGG + chr7_2:75625039-75625058 Msa1077060:intron 15.0%
!! TTGTGCAAATATTTATTTAA+TGG + chr7_2:75625104-75625123 Msa1077060:intron 15.0%
!! ATTTATTAGTTACTACAAAA+TGG + chr7_2:75623811-75623830 Msa1077060:exon 15.0%
!! TTTATTAGTTACTACAAAAT+GGG + chr7_2:75623812-75623831 Msa1077060:exon 15.0%
!! AAAAAAAATGAGAAAAACTT+TGG - chr7_2:75624063-75624082 None:intergenic 15.0%
!!! TTTTTTACAATTTTATCAAC+AGG + chr7_2:75624078-75624097 Msa1077060:intron 15.0%
!! AAAAAAGAGAAAATGAATAA+TGG + chr7_2:75624618-75624637 Msa1077060:intron 15.0%
!!! TTGATTTATCTTTAGTTTTA+AGG + chr7_2:75624657-75624676 Msa1077060:intron 15.0%
!!! TGATTTATCTTTAGTTTTAA+GGG + chr7_2:75624658-75624677 Msa1077060:intron 15.0%
!! TATTATTAACAATTGTGATA+TGG + chr7_2:75624875-75624894 Msa1077060:intron 15.0%
!!! AAATGTTTTTTGTCTAATTT+TGG + chr7_2:75625039-75625058 Msa1077060:intron 15.0%
!! TTGTGCAAATATTTATTTAA+TGG + chr7_2:75625104-75625123 Msa1077060:intron 15.0%
!!! GATTTTACAAACTTAACTAA+TGG + chr7_2:75624326-75624345 Msa1077060:intron 20.0%
!! AAAGATAAATCAAAAGACAT+GGG - chr7_2:75624650-75624669 None:intergenic 20.0%
!! TAAAGATAAATCAAAAGACA+TGG - chr7_2:75624651-75624670 None:intergenic 20.0%
!! ATAACGAGATTAAAAATGTA+TGG + chr7_2:75625181-75625200 Msa1077060:CDS 20.0%
!!! TAATAATGATGTTGTTGATT+CGG + chr7_2:75625449-75625468 Msa1077060:CDS 20.0%
!! TTGTTTAGACAAAAATAATG+TGG + chr7_2:75625812-75625831 Msa1077060:three_prime_UTR 20.0%
!!! GATTTTACAAACTTAACTAA+TGG + chr7_2:75624326-75624345 Msa1077060:intron 20.0%
!! AAAGATAAATCAAAAGACAT+GGG - chr7_2:75624650-75624669 None:intergenic 20.0%
!! TAAAGATAAATCAAAAGACA+TGG - chr7_2:75624651-75624670 None:intergenic 20.0%
!! ATAACGAGATTAAAAATGTA+TGG + chr7_2:75625181-75625200 Msa1077060:CDS 20.0%
!!! TAATAATGATGTTGTTGATT+CGG + chr7_2:75625449-75625468 Msa1077060:CDS 20.0%
!! TTGTTTAGACAAAAATAATG+TGG + chr7_2:75625812-75625831 Msa1077060:three_prime_UTR 20.0%
! ATCCAAAACAACACATAATT+TGG + chr7_2:75623788-75623807 Msa1077060:five_prime_UTR 25.0%
!!! ATCCAAATTATGTGTTGTTT+TGG - chr7_2:75623793-75623812 None:intergenic 25.0%
! ATCAATCACATAAACACTTA+TGG + chr7_2:75623905-75623924 Msa1077060:CDS 25.0%
! AAATTAGTAAAGGCTTGAAT+TGG - chr7_2:75623978-75623997 None:intergenic 25.0%
! AATCAATTTGCATCAAATGT+TGG + chr7_2:75624200-75624219 Msa1077060:CDS 25.0%
! ATCAATTTGCATCAAATGTT+GGG + chr7_2:75624201-75624220 Msa1077060:CDS 25.0%
! ATTCCAAATTCATGTGATAT+TGG + chr7_2:75624303-75624322 Msa1077060:intron 25.0%
! TTCCAAATTCATGTGATATT+GGG + chr7_2:75624304-75624323 Msa1077060:intron 25.0%
!!! GCGTGAACATATATTTTTTT+AGG - chr7_2:75624556-75624575 None:intergenic 25.0%
! AGAGAAAATGAATAATGGTT+TGG + chr7_2:75624623-75624642 Msa1077060:intron 25.0%
! AAGATAAATCAAAAGACATG+GGG - chr7_2:75624649-75624668 None:intergenic 25.0%
!!! GAAAGTATGATATTTTTCGT+AGG - chr7_2:75624919-75624938 None:intergenic 25.0%
! GTAAACCAAATTTCAAAAGT+AGG + chr7_2:75624942-75624961 Msa1077060:intron 25.0%
! GTCTCGAATAATATTAACTT+CGG + chr7_2:75624993-75625012 Msa1077060:intron 25.0%
! AAACAAAAAACAAACCAAGT+TGG + chr7_2:75625266-75625285 Msa1077060:CDS 25.0%
! AACAAAATCATGAAGATGAT+AGG + chr7_2:75625334-75625353 Msa1077060:CDS 25.0%
!!! TTTAGAAGAGTGTTTTTGTT+TGG + chr7_2:75625876-75625895 Msa1077060:three_prime_UTR 25.0%
! ATCCAAAACAACACATAATT+TGG + chr7_2:75623788-75623807 Msa1077060:five_prime_UTR 25.0%
!!! ATCCAAATTATGTGTTGTTT+TGG - chr7_2:75623793-75623812 None:intergenic 25.0%
! ATCAATCACATAAACACTTA+TGG + chr7_2:75623905-75623924 Msa1077060:CDS 25.0%
! AAATTAGTAAAGGCTTGAAT+TGG - chr7_2:75623978-75623997 None:intergenic 25.0%
! AATCAATTTGCATCAAATGT+TGG + chr7_2:75624200-75624219 Msa1077060:CDS 25.0%
! ATCAATTTGCATCAAATGTT+GGG + chr7_2:75624201-75624220 Msa1077060:CDS 25.0%
! ATTCCAAATTCATGTGATAT+TGG + chr7_2:75624303-75624322 Msa1077060:intron 25.0%
! TTCCAAATTCATGTGATATT+GGG + chr7_2:75624304-75624323 Msa1077060:intron 25.0%
!!! GCGTGAACATATATTTTTTT+AGG - chr7_2:75624556-75624575 None:intergenic 25.0%
! AGAGAAAATGAATAATGGTT+TGG + chr7_2:75624623-75624642 Msa1077060:intron 25.0%
! AAGATAAATCAAAAGACATG+GGG - chr7_2:75624649-75624668 None:intergenic 25.0%
!!! GAAAGTATGATATTTTTCGT+AGG - chr7_2:75624919-75624938 None:intergenic 25.0%
! GTAAACCAAATTTCAAAAGT+AGG + chr7_2:75624942-75624961 Msa1077060:intron 25.0%
! GTCTCGAATAATATTAACTT+CGG + chr7_2:75624993-75625012 Msa1077060:intron 25.0%
! AAACAAAAAACAAACCAAGT+TGG + chr7_2:75625266-75625285 Msa1077060:CDS 25.0%
! AACAAAATCATGAAGATGAT+AGG + chr7_2:75625334-75625353 Msa1077060:CDS 25.0%
AAAATGCCAACTTGATCAAA+AGG - chr7_2:75623729-75623748 None:intergenic 30.0%
AAGTGTTTATGTGATTGATG+AGG - chr7_2:75623904-75623923 None:intergenic 30.0%
! AAAATTGTACCAGCTTGTTT+GGG - chr7_2:75623953-75623972 None:intergenic 30.0%
! AAAAATTGTACCAGCTTGTT+TGG - chr7_2:75623954-75623973 None:intergenic 30.0%
! TTTTATCAACAGGATTGCTA+AGG + chr7_2:75624088-75624107 Msa1077060:intron 30.0%
ATCCCAATATCACATGAATT+TGG - chr7_2:75624309-75624328 None:intergenic 30.0%
GACAAATCAGAACAATTGTT+AGG + chr7_2:75624365-75624384 Msa1077060:intron 30.0%
!! AGAGAAAATCCTTTGCTTTT+TGG - chr7_2:75624767-75624786 None:intergenic 30.0%
CGAAAAATATCATACTTTCG+TGG + chr7_2:75624920-75624939 Msa1077060:intron 30.0%
! TTCATGATTTTGTTCCTGTT+TGG - chr7_2:75625328-75625347 None:intergenic 30.0%
! GGCAGAAAATAATTTTGCAT+TGG + chr7_2:75625470-75625489 Msa1077060:CDS 30.0%
! TTGCATTGGATGATGATTTT+TGG + chr7_2:75625484-75625503 Msa1077060:CDS 30.0%
! AATTCTAGCATTGAGACAAA+TGG + chr7_2:75625528-75625547 Msa1077060:CDS 30.0%
TATCAATTTCAAGCTCCATT+AGG + chr7_2:75625576-75625595 Msa1077060:CDS 30.0%
ATTGAGTTTATGCCAAGATA+TGG + chr7_2:75625629-75625648 Msa1077060:CDS 30.0%
!! CTTGTTATTCCTAGATTGTA+TGG + chr7_2:75625743-75625762 Msa1077060:three_prime_UTR 30.0%
ATACAAGTTCCATACAATCT+AGG - chr7_2:75625755-75625774 None:intergenic 30.0%
AAAATGCCAACTTGATCAAA+AGG - chr7_2:75623729-75623748 None:intergenic 30.0%
AAGTGTTTATGTGATTGATG+AGG - chr7_2:75623904-75623923 None:intergenic 30.0%
! AAAATTGTACCAGCTTGTTT+GGG - chr7_2:75623953-75623972 None:intergenic 30.0%
! AAAAATTGTACCAGCTTGTT+TGG - chr7_2:75623954-75623973 None:intergenic 30.0%
! TTTTATCAACAGGATTGCTA+AGG + chr7_2:75624088-75624107 Msa1077060:intron 30.0%
ATCCCAATATCACATGAATT+TGG - chr7_2:75624309-75624328 None:intergenic 30.0%
GACAAATCAGAACAATTGTT+AGG + chr7_2:75624365-75624384 Msa1077060:intron 30.0%
!! AGAGAAAATCCTTTGCTTTT+TGG - chr7_2:75624767-75624786 None:intergenic 30.0%
CGAAAAATATCATACTTTCG+TGG + chr7_2:75624920-75624939 Msa1077060:intron 30.0%
! TTCATGATTTTGTTCCTGTT+TGG - chr7_2:75625328-75625347 None:intergenic 30.0%
! GGCAGAAAATAATTTTGCAT+TGG + chr7_2:75625470-75625489 Msa1077060:CDS 30.0%
! TTGCATTGGATGATGATTTT+TGG + chr7_2:75625484-75625503 Msa1077060:CDS 30.0%
! AATTCTAGCATTGAGACAAA+TGG + chr7_2:75625528-75625547 Msa1077060:CDS 30.0%
TATCAATTTCAAGCTCCATT+AGG + chr7_2:75625576-75625595 Msa1077060:CDS 30.0%
ATTGAGTTTATGCCAAGATA+TGG + chr7_2:75625629-75625648 Msa1077060:CDS 30.0%
!! CTTGTTATTCCTAGATTGTA+TGG + chr7_2:75625743-75625762 Msa1077060:three_prime_UTR 30.0%
ATACAAGTTCCATACAATCT+AGG - chr7_2:75625755-75625774 None:intergenic 30.0%
!!! GTGTTGTTTTGGATTTTGCA+CGG - chr7_2:75623782-75623801 None:intergenic 35.0%
AGAAAATGGGGTTGAAGAAA+GGG + chr7_2:75623852-75623871 Msa1077060:CDS 35.0%
ACACTTATGGTCATTCCAAT+TGG + chr7_2:75623918-75623937 Msa1077060:CDS 35.0%
TAACTTCACCAAAGAAGAAG+AGG + chr7_2:75624170-75624189 Msa1077060:CDS 35.0%
TACAGAGCAGAATATTAGCT+AGG - chr7_2:75624263-75624282 None:intergenic 35.0%
! TCTGTATAGCATTGAACTGA+TGG + chr7_2:75624277-75624296 Msa1077060:intron 35.0%
!!! CTTTAGTTTTAAGGGACAGA+TGG + chr7_2:75624666-75624685 Msa1077060:intron 35.0%
AGTACTACTCCAAAAAGCAA+AGG + chr7_2:75624755-75624774 Msa1077060:intron 35.0%
!!! CTCAGCCTACTTTTGAAATT+TGG - chr7_2:75624950-75624969 None:intergenic 35.0%
! TGGTTTAATGATGATGCAGA+TGG + chr7_2:75625124-75625143 Msa1077060:intron 35.0%
!!! TTGTGTTCATGTTGGTTTTG+TGG - chr7_2:75625231-75625250 None:intergenic 35.0%
TACTGTTGTTGTGTTCATGT+TGG - chr7_2:75625239-75625258 None:intergenic 35.0%
! CATTGAGACAAATGGTGTTA+TGG + chr7_2:75625536-75625555 Msa1077060:CDS 35.0%
!! ACAAATGGTGTTATGGACAT+TGG + chr7_2:75625543-75625562 Msa1077060:CDS 35.0%
GAACTTGTATGCTCATTCAA+TGG + chr7_2:75625765-75625784 Msa1077060:three_prime_UTR 35.0%
TGCTTAGATGCAGAAAATGT+AGG - chr7_2:75625853-75625872 None:intergenic 35.0%
!!! GTGTTGTTTTGGATTTTGCA+CGG - chr7_2:75623782-75623801 None:intergenic 35.0%
AGAAAATGGGGTTGAAGAAA+GGG + chr7_2:75623852-75623871 Msa1077060:CDS 35.0%
ACACTTATGGTCATTCCAAT+TGG + chr7_2:75623918-75623937 Msa1077060:CDS 35.0%
TAACTTCACCAAAGAAGAAG+AGG + chr7_2:75624170-75624189 Msa1077060:CDS 35.0%
TACAGAGCAGAATATTAGCT+AGG - chr7_2:75624263-75624282 None:intergenic 35.0%
! TCTGTATAGCATTGAACTGA+TGG + chr7_2:75624277-75624296 Msa1077060:intron 35.0%
!!! CTTTAGTTTTAAGGGACAGA+TGG + chr7_2:75624666-75624685 Msa1077060:intron 35.0%
AGTACTACTCCAAAAAGCAA+AGG + chr7_2:75624755-75624774 Msa1077060:intron 35.0%
!!! CTCAGCCTACTTTTGAAATT+TGG - chr7_2:75624950-75624969 None:intergenic 35.0%
! TGGTTTAATGATGATGCAGA+TGG + chr7_2:75625124-75625143 Msa1077060:intron 35.0%
!!! TTGTGTTCATGTTGGTTTTG+TGG - chr7_2:75625231-75625250 None:intergenic 35.0%
TACTGTTGTTGTGTTCATGT+TGG - chr7_2:75625239-75625258 None:intergenic 35.0%
! CATTGAGACAAATGGTGTTA+TGG + chr7_2:75625536-75625555 Msa1077060:CDS 35.0%
!! ACAAATGGTGTTATGGACAT+TGG + chr7_2:75625543-75625562 Msa1077060:CDS 35.0%
GAACTTGTATGCTCATTCAA+TGG + chr7_2:75625765-75625784 Msa1077060:three_prime_UTR 35.0%
TGCTTAGATGCAGAAAATGT+AGG - chr7_2:75625853-75625872 None:intergenic 35.0%
! GTGTCACCTTTTGATCAAGT+TGG + chr7_2:75623720-75623739 Msa1077060:five_prime_UTR 40.0%
GAGAAAATGGGGTTGAAGAA+AGG + chr7_2:75623851-75623870 Msa1077060:CDS 40.0%
AAAGAGTTGCAGATTGCGAT+GGG + chr7_2:75624116-75624135 Msa1077060:CDS 40.0%
! ATGGGCAAATTATCTGAAGC+CGG + chr7_2:75624134-75624153 Msa1077060:CDS 40.0%
TATTGCGTCCTCTTCTTCTT+TGG - chr7_2:75624181-75624200 None:intergenic 40.0%
TGCATCAAATGTTGGGAAAC+AGG + chr7_2:75624208-75624227 Msa1077060:CDS 40.0%
GCAGAATATTAGCTAGGTTG+TGG - chr7_2:75624257-75624276 None:intergenic 40.0%
! GTATAGCATTGAACTGATGG+AGG + chr7_2:75624280-75624299 Msa1077060:intron 40.0%
! TGGCAGCCTTTTCTTCAAAT+GGG - chr7_2:75625211-75625230 None:intergenic 40.0%
!! TTTGGTGTCTTGGTCTGAAT+TGG - chr7_2:75625310-75625329 None:intergenic 40.0%
!! TTTGTTCCTGTTTGGTGTCT+TGG - chr7_2:75625320-75625339 None:intergenic 40.0%
ACTCCTTCTTCTCTTCCTAA+TGG - chr7_2:75625594-75625613 None:intergenic 40.0%
TATGCCAAGATATGGACTTC+TGG + chr7_2:75625637-75625656 Msa1077060:CDS 40.0%
GAAAATGTAGGCAAATGTGG+AGG - chr7_2:75625841-75625860 None:intergenic 40.0%
GCAGAAAATGTAGGCAAATG+TGG - chr7_2:75625844-75625863 None:intergenic 40.0%
! GTGTCACCTTTTGATCAAGT+TGG + chr7_2:75623720-75623739 Msa1077060:five_prime_UTR 40.0%
GAGAAAATGGGGTTGAAGAA+AGG + chr7_2:75623851-75623870 Msa1077060:CDS 40.0%
AAAGAGTTGCAGATTGCGAT+GGG + chr7_2:75624116-75624135 Msa1077060:CDS 40.0%
! ATGGGCAAATTATCTGAAGC+CGG + chr7_2:75624134-75624153 Msa1077060:CDS 40.0%
TATTGCGTCCTCTTCTTCTT+TGG - chr7_2:75624181-75624200 None:intergenic 40.0%
TGCATCAAATGTTGGGAAAC+AGG + chr7_2:75624208-75624227 Msa1077060:CDS 40.0%
GCAGAATATTAGCTAGGTTG+TGG - chr7_2:75624257-75624276 None:intergenic 40.0%
! GTATAGCATTGAACTGATGG+AGG + chr7_2:75624280-75624299 Msa1077060:intron 40.0%
! TGGCAGCCTTTTCTTCAAAT+GGG - chr7_2:75625211-75625230 None:intergenic 40.0%
!! TTTGGTGTCTTGGTCTGAAT+TGG - chr7_2:75625310-75625329 None:intergenic 40.0%
!! TTTGTTCCTGTTTGGTGTCT+TGG - chr7_2:75625320-75625339 None:intergenic 40.0%
ACTCCTTCTTCTCTTCCTAA+TGG - chr7_2:75625594-75625613 None:intergenic 40.0%
TATGCCAAGATATGGACTTC+TGG + chr7_2:75625637-75625656 Msa1077060:CDS 40.0%
GAAAATGTAGGCAAATGTGG+AGG - chr7_2:75625841-75625860 None:intergenic 40.0%
GCAGAAAATGTAGGCAAATG+TGG - chr7_2:75625844-75625863 None:intergenic 40.0%
AGCTCCATGCTGTGAGAAAA+TGG + chr7_2:75623838-75623857 Msa1077060:CDS 45.0%
GCTCCATGCTGTGAGAAAAT+GGG + chr7_2:75623839-75623858 Msa1077060:CDS 45.0%
CTCCATGCTGTGAGAAAATG+GGG + chr7_2:75623840-75623859 Msa1077060:CDS 45.0%
! AACCCCATTTTCTCACAGCA+TGG - chr7_2:75623845-75623864 None:intergenic 45.0%
CGATCTTCTTCTGTAGTCCA+TGG - chr7_2:75623878-75623897 None:intergenic 45.0%
TCAACAGGATTGCTAAGGTG+TGG + chr7_2:75624093-75624112 Msa1077060:intron 45.0%
GAAAGAGTTGCAGATTGCGA+TGG + chr7_2:75624115-75624134 Msa1077060:CDS 45.0%
! ATCTGAAGCCGGATATCAAG+CGG + chr7_2:75624145-75624164 Msa1077060:CDS 45.0%
AAGTTACCCCGCTTGATATC+CGG - chr7_2:75624156-75624175 None:intergenic 45.0%
TAAGGGACAGATGGATACGT+CGG + chr7_2:75624675-75624694 Msa1077060:intron 45.0%
GATGGTCAACTATTGCAGCA+AGG + chr7_2:75625142-75625161 Msa1077060:intron 45.0%
ACTATTGCAGCAAGGTTACC+TGG + chr7_2:75625150-75625169 Msa1077060:CDS 45.0%
ATCTCGTTATCTGTTCGTCC+AGG - chr7_2:75625171-75625190 None:intergenic 45.0%
GGCACACCCATTTGAAGAAA+AGG + chr7_2:75625202-75625221 Msa1077060:CDS 45.0%
! GTGGCAGCCTTTTCTTCAAA+TGG - chr7_2:75625212-75625231 None:intergenic 45.0%
GTCGACATGAAAGTCCAACT+TGG - chr7_2:75625283-75625302 None:intergenic 45.0%
TTCAGACCAAGACACCAAAC+AGG + chr7_2:75625311-75625330 Msa1077060:CDS 45.0%
GCTCCATTAGGAAGAGAAGA+AGG + chr7_2:75625588-75625607 Msa1077060:CDS 45.0%
AGCTCCATGCTGTGAGAAAA+TGG + chr7_2:75623838-75623857 Msa1077060:CDS 45.0%
GCTCCATGCTGTGAGAAAAT+GGG + chr7_2:75623839-75623858 Msa1077060:CDS 45.0%
CTCCATGCTGTGAGAAAATG+GGG + chr7_2:75623840-75623859 Msa1077060:CDS 45.0%
! AACCCCATTTTCTCACAGCA+TGG - chr7_2:75623845-75623864 None:intergenic 45.0%
CGATCTTCTTCTGTAGTCCA+TGG - chr7_2:75623878-75623897 None:intergenic 45.0%
TCAACAGGATTGCTAAGGTG+TGG + chr7_2:75624093-75624112 Msa1077060:intron 45.0%
GAAAGAGTTGCAGATTGCGA+TGG + chr7_2:75624115-75624134 Msa1077060:CDS 45.0%
! ATCTGAAGCCGGATATCAAG+CGG + chr7_2:75624145-75624164 Msa1077060:CDS 45.0%
AAGTTACCCCGCTTGATATC+CGG - chr7_2:75624156-75624175 None:intergenic 45.0%
TAAGGGACAGATGGATACGT+CGG + chr7_2:75624675-75624694 Msa1077060:intron 45.0%
GATGGTCAACTATTGCAGCA+AGG + chr7_2:75625142-75625161 Msa1077060:intron 45.0%
ACTATTGCAGCAAGGTTACC+TGG + chr7_2:75625150-75625169 Msa1077060:CDS 45.0%
ATCTCGTTATCTGTTCGTCC+AGG - chr7_2:75625171-75625190 None:intergenic 45.0%
GGCACACCCATTTGAAGAAA+AGG + chr7_2:75625202-75625221 Msa1077060:CDS 45.0%
! GTGGCAGCCTTTTCTTCAAA+TGG - chr7_2:75625212-75625231 None:intergenic 45.0%
GTCGACATGAAAGTCCAACT+TGG - chr7_2:75625283-75625302 None:intergenic 45.0%
TTCAGACCAAGACACCAAAC+AGG + chr7_2:75625311-75625330 Msa1077060:CDS 45.0%
GCTCCATTAGGAAGAGAAGA+AGG + chr7_2:75625588-75625607 Msa1077060:CDS 45.0%
!! TTTAAAAAAAAAAAAAAAGT+GGG - chr7_2:75624808-75624827 None:intergenic 5.0%
!! TTTAAAAAAAAAAAAAAAGT+GGG - chr7_2:75624808-75624827 None:intergenic 5.0%
! TTTGGGAAGAGCACGCCAAT+TGG - chr7_2:75623936-75623955 None:intergenic 50.0%
! TCTGAAGCCGGATATCAAGC+GGG + chr7_2:75624146-75624165 Msa1077060:CDS 50.0%
GGTGTCTTGGTCTGAATTGG+AGG - chr7_2:75625307-75625326 None:intergenic 50.0%
CGTGCCAGAAGTCCATATCT+TGG - chr7_2:75625644-75625663 None:intergenic 50.0%
CGATGTTTATGCGAGAGCTG+AGG + chr7_2:75625662-75625681 Msa1077060:CDS 50.0%
! TTTGGGAAGAGCACGCCAAT+TGG - chr7_2:75623936-75623955 None:intergenic 50.0%
! TCTGAAGCCGGATATCAAGC+GGG + chr7_2:75624146-75624165 Msa1077060:CDS 50.0%
GGTGTCTTGGTCTGAATTGG+AGG - chr7_2:75625307-75625326 None:intergenic 50.0%
CGTGCCAGAAGTCCATATCT+TGG - chr7_2:75625644-75625663 None:intergenic 50.0%
CGATGTTTATGCGAGAGCTG+AGG + chr7_2:75625662-75625681 Msa1077060:CDS 50.0%
TGGGGTTGAAGAAAGGGCCA+TGG + chr7_2:75623858-75623877 Msa1077060:CDS 55.0%
CGTGCTCTTCCCAAACAAGC+TGG + chr7_2:75623941-75623960 Msa1077060:CDS 55.0%
CTGAAGCCGGATATCAAGCG+GGG + chr7_2:75624147-75624166 Msa1077060:CDS 55.0%
TGGGGTTGAAGAAAGGGCCA+TGG + chr7_2:75623858-75623877 Msa1077060:CDS 55.0%
CGTGCTCTTCCCAAACAAGC+TGG + chr7_2:75623941-75623960 Msa1077060:CDS 55.0%
CTGAAGCCGGATATCAAGCG+GGG + chr7_2:75624147-75624166 Msa1077060:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 75623688 75625898 75623688 ID=Msa1077060;Name=Msa1077060
chr7_2 mRNA 75623688 75625898 75623688 ID=Msa1077060-mRNA-1;Parent=Msa1077060;Name=Msa1077060-mRNA-1;_AED=0.02;_eAED=0.02;_QI=142|1|1|1|1|1|3|188|276
chr7_2 exon 75623688 75623962 75623688 ID=Msa1077060-mRNA-1:exon:18053;Parent=Msa1077060-mRNA-1
chr7_2 exon 75624100 75624229 75624100 ID=Msa1077060-mRNA-1:exon:18054;Parent=Msa1077060-mRNA-1
chr7_2 exon 75625143 75625898 75625143 ID=Msa1077060-mRNA-1:exon:18055;Parent=Msa1077060-mRNA-1
chr7_2 five_prime_UTR 75623688 75623829 75623688 ID=Msa1077060-mRNA-1:five_prime_utr;Parent=Msa1077060-mRNA-1
chr7_2 CDS 75623830 75623962 75623830 ID=Msa1077060-mRNA-1:cds;Parent=Msa1077060-mRNA-1
chr7_2 CDS 75624100 75624229 75624100 ID=Msa1077060-mRNA-1:cds;Parent=Msa1077060-mRNA-1
chr7_2 CDS 75625143 75625710 75625143 ID=Msa1077060-mRNA-1:cds;Parent=Msa1077060-mRNA-1
chr7_2 three_prime_UTR 75625711 75625898 75625711 ID=Msa1077060-mRNA-1:three_prime_utr;Parent=Msa1077060-mRNA-1
Gene Sequence

>Msa1077060

ATGGGAAGAGCTCCATGCTGTGAGAAAATGGGGTTGAAGAAAGGGCCATGGACTACAGAAGAAGATCGAATCCTCATCAATCACATAAACACTTATGGTCATTCCAATTGGCGTGCTCTTCCCAAACAAGCTGGATTGCTAAGGTGTGGAAAGAGTTGCAGATTGCGATGGGCAAATTATCTGAAGCCGGATATCAAGCGGGGTAACTTCACCAAAGAAGAAGAGGACGCAATAATCAATTTGCATCAAATGTTGGGAAACAGATGGTCAACTATTGCAGCAAGGTTACCTGGACGAACAGATAACGAGATTAAAAATGTATGGCACACCCATTTGAAGAAAAGGCTGCCACAAAACCAACATGAACACAACAACAGTACAAAACGAAACAAAAAACAAACCAAGTTGGACTTTCATGTCGACGCCTCCAATTCAGACCAAGACACCAAACAGGAACAAAATCATGAAGATGATAGGCAACAGTGTTCTAGTGACGTGTCATCACATAATAATAGTAGCATTGCTACTTCAAATAATGATACAAGTTACAATAATATCAACAACAACAATAATAATGATGTTGTTGATTCGGCAGAAAATAATTTTGCATTGGATGATGATTTTTGGTGTGAAGTTTTGTCATCTGATAATTCTAGCATTGAGACAAATGGTGTTATGGACATTGGTGTTGATAATTATCAATTTCAAGCTCCATTAGGAAGAGAAGAAGGAGTTTTTGATTCTAGTTCATTGAGTTTATGCCAAGATATGGACTTCTGGCACGATGTTTATGCGAGAGCTGAGGAAATAACTGAGTTACTAGAATTATGA
Protein sequence

>Msa1077060

MGRAPCCEKMGLKKGPWTTEEDRILINHINTYGHSNWRALPKQAGLLRCGKSCRLRWANYLKPDIKRGNFTKEEEDAIINLHQMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLPQNQHEHNNSTKRNKKQTKLDFHVDASNSDQDTKQEQNHEDDRQQCSSDVSSHNNSSIATSNNDTSYNNINNNNNNDVVDSAENNFALDDDFWCEVLSSDNSSIETNGVMDIGVDNYQFQAPLGREEGVFDSSSLSLCQDMDFWHDVYARAEEITELLEL*