AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0951210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0951210 MtrunA17_Chr6g0467331 90.837 251 15 3 1 243 141 391 1.51e-152 444
Msa0951210 MtrunA17_Chr6g0467331 78.947 57 12 0 281 337 599 655 1.27e-18 87.4
Msa0951210 MtrunA17_Chr8g0381061 40.465 215 118 4 1 205 151 365 3.70e-41 148
Msa0951210 MtrunA17_Chr7g0268361 37.778 225 121 5 1 207 142 365 6.10e-41 149
Msa0951210 MtrunA17_Chr7g0220971 30.534 262 160 6 1 250 162 413 1.30e-34 131
Msa0951210 MtrunA17_Chr8g0389501 36.667 150 84 3 1 139 89 238 1.90e-30 116
Msa0951210 MtrunA17_Chr1g0161181 31.019 216 139 5 1 206 148 363 5.62e-30 118
Msa0951210 MtrunA17_Chr1g0185761 30.233 215 140 5 1 205 148 362 3.63e-29 116
Msa0951210 MtrunA17_Chr6g0462491 29.934 304 187 11 1 278 158 461 1.16e-26 110
Msa0951210 MtrunA17_Chr7g0255281 28.685 251 162 5 1 237 156 403 2.42e-26 108
Msa0951210 MtrunA17_Chr3g0088781 33.645 214 126 7 1 205 128 334 1.22e-25 107
Msa0951210 MtrunA17_Chr3g0088811 33.019 212 130 6 1 205 28 234 1.69e-25 104
Msa0951210 MtrunA17_Chr3g0109091 30.172 232 132 7 2 208 163 389 1.78e-25 106
Msa0951210 MtrunA17_Chr1g0153201 33.645 214 126 7 1 205 128 334 3.69e-25 105
Msa0951210 MtrunA17_Chr2g0311491 28.947 304 190 11 1 278 3 306 1.15e-24 102
Msa0951210 MtrunA17_Chr6g0473071 30.290 241 145 7 1 218 153 393 1.22e-23 101
Msa0951210 MtrunA17_Chr3g0136561 30.705 241 144 7 1 218 146 386 2.03e-23 102
Msa0951210 MtrunA17_Chr3g0115901 29.577 213 130 7 1 197 167 375 1.43e-19 89.4
Msa0951210 MtrunA17_Chr7g0275561 26.136 264 174 7 1 249 196 453 7.80e-17 81.6
Msa0951210 MtrunA17_Chr8g0358271 25.541 231 142 5 1 204 140 367 1.30e-16 80.5
Msa0951210 MtrunA17_Chr6g0462481 30.573 157 96 5 1 144 48 204 1.23e-13 69.3
Msa0951210 MtrunA17_Chr3g0121121 24.074 216 149 6 1 204 177 389 1.20e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0951210 AT1G71850.1 51.852 270 111 6 1 258 143 405 4.11e-85 266
Msa0951210 AT4G24320.1 38.528 231 125 5 1 215 136 365 4.75e-52 178
Msa0951210 AT3G58520.2 34.956 226 127 5 1 207 133 357 1.26e-39 145
Msa0951210 AT3G58520.1 34.956 226 127 5 1 207 145 369 2.01e-39 145
Msa0951210 AT5G48040.1 36.019 211 129 3 1 206 153 362 8.71e-38 140
Msa0951210 AT2G39120.1 36.530 219 120 5 1 205 142 355 2.44e-34 130
Msa0951210 AT3G63090.1 31.163 215 138 5 1 205 151 365 1.14e-28 115
Msa0951210 AT5G45790.1 30.841 214 138 4 1 205 93 305 2.10e-27 111
Msa0951210 AT5G45790.2 30.841 214 138 4 1 205 178 390 5.00e-27 111
Msa0951210 AT2G31290.1 30.000 260 164 8 1 249 135 387 5.89e-27 110
Msa0951210 AT2G31290.2 30.000 260 164 8 1 249 135 387 5.89e-27 110
Msa0951210 AT5G21970.1 29.778 225 146 4 1 213 165 389 2.37e-26 109
Msa0951210 AT5G21970.2 29.778 225 146 4 1 213 165 389 2.37e-26 109
Msa0951210 AT1G06440.1 32.579 221 123 6 8 205 153 370 4.87e-24 102
Msa0951210 AT4G01037.1 28.365 208 134 4 1 193 188 395 4.30e-22 97.8
Msa0951210 AT4G33495.1 32.068 237 139 9 1 215 158 394 4.63e-22 97.1
Msa0951210 AT4G08940.1 33.010 206 127 7 1 197 175 378 1.07e-21 95.9
Msa0951210 AT1G79120.1 26.872 227 142 5 1 204 169 394 1.16e-20 92.8
Msa0951210 AT1G79120.2 26.872 227 142 5 1 204 169 394 1.16e-20 92.8

Find 119 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGTTTGGAGAAGAAATA+TGG 0.226789 6_3:-40939038 Msa0951210:CDS
GTCTGTTATTCCGGAGTTTC+CGG 0.227380 6_3:-40939135 Msa0951210:CDS
GGACATTCTATTTCATAAAA+TGG 0.254627 6_3:-40932539 Msa0951210:CDS
ATTTCATAAAATGGTAGTTT+TGG 0.297234 6_3:-40932530 Msa0951210:exon
GTCCCTTACCCTTGAAATAA+TGG 0.309399 6_3:-40932321 Msa0951210:three_prime_UTR
AATCGGATAAGTGGGTGGTT+GGG 0.347615 6_3:-40938854 Msa0951210:CDS
ATAATCCGGCGATGGAGTTT+AGG 0.350561 6_3:-40938629 Msa0951210:CDS
TTATGTTAAGTCTGTTATTC+CGG 0.356135 6_3:-40939144 Msa0951210:CDS
TGTCGATAACAATGCTGTTT+TGG 0.365626 6_3:-40939093 Msa0951210:CDS
AGAACACGCGGTATCGTGTT+TGG 0.375796 6_3:-40939051 Msa0951210:CDS
TGGATAAGAAGTATGAGAAA+TGG 0.379568 6_3:-40938950 Msa0951210:CDS
CATTCATCTCCCACGTTGAC+CGG 0.392084 6_3:+40937740 None:intergenic
ATCGGATAAGTGGGTGGTTG+GGG 0.394643 6_3:-40938853 Msa0951210:CDS
GAGGGTGATCTTGGAGCATC+CGG 0.395303 6_3:-40938733 Msa0951210:CDS
GAAGTTTAAGAGGGTGATCT+TGG 0.396021 6_3:-40938742 Msa0951210:CDS
TGTCCTCCCTCTGAAAGAAC+AGG 0.411635 6_3:+40932557 None:intergenic
AGACCATTATTTCAAGGGTA+AGG 0.415913 6_3:+40932318 None:intergenic
GGATAAGAAGTATGAGAAAT+GGG 0.425814 6_3:-40938949 Msa0951210:CDS
CAAGAAAGATAAGGATGAGA+AGG 0.431026 6_3:-40938565 Msa0951210:CDS
GATGGTTTGAAATGGGATCT+TGG 0.432347 6_3:-40939179 Msa0951210:CDS
GAATCGGATAAGTGGGTGGT+TGG 0.432642 6_3:-40938855 Msa0951210:CDS
ATTCCTTTGAGTGTTGTTGA+TGG 0.432681 6_3:-40939197 Msa0951210:CDS
GAATCGCGGGGAGGAGGAAG+AGG 0.434774 6_3:-40938472 Msa0951210:CDS
GAAAGGGAAAGGGATAGAAT+TGG 0.440259 6_3:-40939006 Msa0951210:CDS
GTGTTGTTGATGGTTTGAAA+TGG 0.443307 6_3:-40939187 Msa0951210:CDS
TTTATGTGTCGAGTAAGAAT+AGG 0.445007 6_3:-40938704 Msa0951210:CDS
AAAGGGAAAGGGATAGAATT+GGG 0.445101 6_3:-40939005 Msa0951210:CDS
TTTGCTTGTTGAGGATAATC+CGG 0.448243 6_3:-40938643 Msa0951210:CDS
TACGTAAGACCATTATTTCA+AGG 0.448523 6_3:+40932312 None:intergenic
CAAACGTTAATTGACCTGTA+AGG 0.449964 6_3:+40932391 None:intergenic
GTTTAGCGTCGAAGTTTAAG+AGG 0.459064 6_3:-40938752 Msa0951210:CDS
GAGTAAGAATAGGATGTATA+CGG 0.459698 6_3:-40938694 Msa0951210:CDS
TGTTGTTGATGGTTTGAAAT+GGG 0.460077 6_3:-40939186 Msa0951210:CDS
TTGATGATTGGTGAGTGGTT+GGG 0.461311 6_3:-40938774 Msa0951210:CDS
TTTGAGAGATGGGTATAAGA+GGG 0.467739 6_3:-40938667 Msa0951210:CDS
GGGATAAAGCGAAAGGGAAA+GGG 0.468563 6_3:-40939016 Msa0951210:CDS
GGGGATAAAGCGAAAGGGAA+AGG 0.469885 6_3:-40939017 Msa0951210:CDS
CGTGTTTGGAGAAGAAATAT+GGG 0.472256 6_3:-40939037 Msa0951210:CDS
AGATAATTAAGCAGAAATCA+TGG 0.473603 6_3:+40932353 None:intergenic
GAGTGGTTCGAGTGAGGAAT+CGG 0.473827 6_3:-40938871 Msa0951210:CDS
TGATACTACAAATCTACAAA+GGG 0.474147 6_3:-40932496 Msa0951210:three_prime_UTR
TTTGTTCACAGAAACGCAAT+TGG 0.479984 6_3:-40932609 Msa0951210:intron
TTTGATGATTGGTGAGTGGT+TGG 0.484252 6_3:-40938775 Msa0951210:CDS
TAAGAGGGGTTTGCTTGTTG+AGG 0.484504 6_3:-40938652 Msa0951210:CDS
AAGAAAGATAAGGATGAGAA+GGG 0.486207 6_3:-40938564 Msa0951210:CDS
AAAAGAGGATAATTTGAAAG+AGG 0.489090 6_3:-40938529 Msa0951210:CDS
GATTCTCGCAGAGAGAGATC+AGG 0.490479 6_3:-40937775 Msa0951210:CDS
CGCGGGGAGGAGGAAGAGGA+AGG 0.500739 6_3:-40938468 Msa0951210:CDS
GGAAGATAGCAAGAAAGATA+AGG 0.502237 6_3:-40938574 Msa0951210:CDS
GAAGAGGAGGAGTCGGCGAC+GGG 0.503989 6_3:-40938384 Msa0951210:CDS
CGAGTGAGGAATCGGATAAG+TGG 0.504870 6_3:-40938863 Msa0951210:CDS
GATAATTTGAAAGAGGATGA+AGG 0.505367 6_3:-40938522 Msa0951210:CDS
TTGAGAGATGGGTATAAGAG+GGG 0.509306 6_3:-40938666 Msa0951210:CDS
TGACAAGAATCGCGGGGAGG+AGG 0.510631 6_3:-40938478 Msa0951210:CDS
GGTGAGTAAGAAGACGGAGA+AGG 0.511597 6_3:-40938805 Msa0951210:intron
ACAGACTTAACATAATCATC+AGG 0.512102 6_3:+40939152 None:intergenic
ATCAGCCCTGTTCTTTCAGA+GGG 0.516258 6_3:-40932563 Msa0951210:CDS
TTTGAAAGAGGATGAAGGTA+AGG 0.517129 6_3:-40938517 Msa0951210:CDS
GGATGAAGGTAAGGTAAGAG+AGG 0.517610 6_3:-40938508 Msa0951210:CDS
GATCAGGTGGGAAGGTTACC+CGG 0.525348 6_3:-40937759 Msa0951210:CDS
GATAATTAAGCAGAAATCAT+GGG 0.525437 6_3:+40932354 None:intergenic
ATGAGAAATGGGTGAAGGAG+TGG 0.528928 6_3:-40938938 Msa0951210:CDS
GATCAGCCCTGTTCTTTCAG+AGG 0.529336 6_3:-40932564 Msa0951210:CDS
CACAGAAACGCAATTGGCAT+CGG 0.532080 6_3:-40932603 Msa0951210:intron
AAGAGCGTGACAAGAATCGC+GGG 0.534139 6_3:-40938485 Msa0951210:CDS
GACCATTATTTCAAGGGTAA+GGG 0.534858 6_3:+40932319 None:intergenic
GCGGGGAGGAGGAAGAGGAA+GGG 0.538949 6_3:-40938467 Msa0951210:CDS
TCACCATCTTTATATTCACC+TGG 0.540850 6_3:+40937688 None:intergenic
ACGTAAGACCATTATTTCAA+GGG 0.543721 6_3:+40932313 None:intergenic
TCTGAAAGAACAGGGCTGAT+CGG 0.547463 6_3:+40932566 None:intergenic
CCAACAACACGAAAATGATC+CGG 0.547637 6_3:+40939116 None:intergenic
ATTCATCTCCCACGTTGACC+GGG 0.552295 6_3:+40937741 None:intergenic
CGAAAATGATCCGGAAACTC+CGG 0.556080 6_3:+40939125 None:intergenic
AGGGTGATCTTGGAGCATCC+GGG 0.557443 6_3:-40938732 Msa0951210:CDS
AAACCAGGTGAATATAAAGA+TGG 0.562243 6_3:-40937691 Msa0951210:CDS
AATTGTTGATGATTGCGAAA+GGG 0.566481 6_3:-40939226 None:intergenic
AAATTCACACCATTCTCATA+CGG 0.568606 6_3:+40938894 None:intergenic
AGATCCTCTAAAAGCAGAGA+GGG 0.568723 6_3:-40937646 Msa0951210:CDS
TGAAGAGGAGGAGTCGGCGA+CGG 0.569515 6_3:-40938385 Msa0951210:CDS
CTCCTCCTAAACTCCATCGC+CGG 0.570927 6_3:+40938624 None:intergenic
AATATGGGGATAAAGCGAAA+GGG 0.574628 6_3:-40939022 Msa0951210:CDS
ATGATACTACAAATCTACAA+AGG 0.576988 6_3:-40932497 Msa0951210:three_prime_UTR
TGATGATGAAGAGGAGGAGT+CGG 0.578125 6_3:-40938391 Msa0951210:CDS
GAAGTATGAGAAATGGGTGA+AGG 0.579452 6_3:-40938943 Msa0951210:CDS
AAATATGGGGATAAAGCGAA+AGG 0.582685 6_3:-40939023 Msa0951210:CDS
CTCGACACATAAAATATCCC+CGG 0.586519 6_3:+40938714 None:intergenic
AAACCATCAACAACACTCAA+AGG 0.589221 6_3:+40939194 None:intergenic
ATCCGGCGATGGAGTTTAGG+AGG 0.589630 6_3:-40938626 Msa0951210:CDS
AAATTGTTGATGATTGCGAA+AGG 0.592734 6_3:-40939227 None:intergenic
TCTCGCAGAGAGAGATCAGG+TGG 0.599165 6_3:-40937772 Msa0951210:CDS
AGCCCTGTTCTTTCAGAGGG+AGG 0.599822 6_3:-40932560 Msa0951210:CDS
CAGAGAGAGATCAGGTGGGA+AGG 0.600425 6_3:-40937767 Msa0951210:CDS
TATGTGAGTCCGTATGAGAA+TGG 0.604460 6_3:-40938903 Msa0951210:CDS
GAGTGAGGAATCGGATAAGT+GGG 0.609253 6_3:-40938862 Msa0951210:CDS
TTAGAGGATCTTGATCGTTG+CGG 0.611588 6_3:+40937658 None:intergenic
CGGCGATGGAGTTTAGGAGG+AGG 0.612766 6_3:-40938623 Msa0951210:CDS
GGAAGAGGAAGGGAGCTGTG+AGG 0.615338 6_3:-40938457 Msa0951210:CDS
TGTTGAGGATAATCCGGCGA+TGG 0.615441 6_3:-40938637 Msa0951210:CDS
TTTAGCGTCGAAGTTTAAGA+GGG 0.615887 6_3:-40938751 Msa0951210:CDS
GGAAGGTTACCCGGTCAACG+TGG 0.620578 6_3:-40937750 Msa0951210:CDS
GAATTTGAGTGGTTCGAGTG+AGG 0.634544 6_3:-40938877 Msa0951210:CDS
AACTGTCGATGATGATGAAG+AGG 0.634903 6_3:-40938400 Msa0951210:CDS
GGGTGATCTTGGAGCATCCG+GGG 0.636099 6_3:-40938731 Msa0951210:CDS
TGTCGATGATGATGAAGAGG+AGG 0.638009 6_3:-40938397 Msa0951210:CDS
GAGAATGGTGTGAATTTGAG+TGG 0.638610 6_3:-40938888 Msa0951210:CDS
AAACCCGTCGAAAATTGCAC+CGG 0.645051 6_3:+40938978 None:intergenic
GAAGAGCGTGACAAGAATCG+CGG 0.652523 6_3:-40938486 Msa0951210:CDS
GTCCTCCCTCTGAAAGAACA+GGG 0.657199 6_3:+40932558 None:intergenic
CTCGCAGAGAGAGATCAGGT+GGG 0.670453 6_3:-40937771 Msa0951210:CDS
TCTCTGCGAGAATCACTCGA+AGG 0.673183 6_3:+40937784 None:intergenic
GAAGGTTACCCGGTCAACGT+GGG 0.688774 6_3:-40937749 Msa0951210:CDS
GATACTACAAATCTACAAAG+GGG 0.689117 6_3:-40932495 Msa0951210:three_prime_UTR
TGAGGAATCGGATAAGTGGG+TGG 0.689630 6_3:-40938859 Msa0951210:CDS
AAGATCCTCTAAAAGCAGAG+AGG 0.691624 6_3:-40937647 Msa0951210:CDS
GTGTTTGGAGAAGAAATATG+GGG 0.692639 6_3:-40939036 Msa0951210:CDS
GATCCTCTAAAAGCAGAGAG+GGG 0.704496 6_3:-40937645 Msa0951210:intron
AGAGCGTGACAAGAATCGCG+GGG 0.712062 6_3:-40938484 Msa0951210:CDS
GCGTGACAAGAATCGCGGGG+AGG 0.714003 6_3:-40938481 Msa0951210:CDS
TTGTTGGAGTAAAGAACACG+CGG 0.744126 6_3:-40939063 Msa0951210:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTTAACAAAAAATTTAA+GGG + chr6_3:40935683-40935702 None:intergenic 10.0%
!!! AATATTTTTATTATGTTAGA+TGG - chr6_3:40936108-40936127 Msa0951210:intron 10.0%
!! ATATAATTAAGTTTAAAGAT+TGG + chr6_3:40937791-40937810 None:intergenic 10.0%
!! TCTTTAAACTTAATTATATA+CGG - chr6_3:40937792-40937811 Msa0951210:CDS 10.0%
!! AACAGATTATAAATTAAAAG+AGG - chr6_3:40934141-40934160 Msa0951210:intron 15.0%
!! ACAGATTATAAATTAAAAGA+GGG - chr6_3:40934142-40934161 Msa0951210:intron 15.0%
!!! TAGTCTTACTAAATAATTTT+AGG - chr6_3:40934653-40934672 Msa0951210:intron 15.0%
!! ATTGTAATTATTAAGTATGA+TGG - chr6_3:40935340-40935359 Msa0951210:intron 15.0%
!! GATAAAACTCATTTATTATA+TGG - chr6_3:40935648-40935667 Msa0951210:intron 15.0%
!! GGAATTTAACAAAAAATTTA+AGG + chr6_3:40935684-40935703 None:intergenic 15.0%
!! TGTATACAAATCATTAAATA+TGG + chr6_3:40938264-40938283 None:intergenic 15.0%
!! ATGTTGAATATAATACATAA+AGG - chr6_3:40938283-40938302 Msa0951210:intron 15.0%
!! TATAACATAAAAGGATCAAT+GGG + chr6_3:40933968-40933987 None:intergenic 20.0%
!! TTATAACATAAAAGGATCAA+TGG + chr6_3:40933969-40933988 None:intergenic 20.0%
!! TGTGAAAGTTATAACATAAA+AGG + chr6_3:40933977-40933996 None:intergenic 20.0%
!! TAACTTTCACATTAGAAATT+TGG - chr6_3:40933986-40934005 Msa0951210:intron 20.0%
!!! TCTGTTTTTGTATTAATTAC+AGG + chr6_3:40934127-40934146 None:intergenic 20.0%
!! CAGATTATAAATTAAAAGAG+GGG - chr6_3:40934143-40934162 Msa0951210:intron 20.0%
!! ACATTAAATTCACCTAATAA+TGG + chr6_3:40934633-40934652 None:intergenic 20.0%
!!! TCAGAACTTATATATTTTGA+TGG - chr6_3:40935286-40935305 Msa0951210:intron 20.0%
!!! CAGAACTTATATATTTTGAT+GGG - chr6_3:40935287-40935306 Msa0951210:intron 20.0%
!!! CATTTTAATATTTGTGTGTT+TGG - chr6_3:40935512-40935531 Msa0951210:intron 20.0%
!! AATCATAATTAGAGATAACA+AGG + chr6_3:40935715-40935734 None:intergenic 20.0%
!! ACAAGTATAAGAAAATTCTA+AGG + chr6_3:40935816-40935835 None:intergenic 20.0%
!!! TCAATAGATGATTTGATTTT+CGG - chr6_3:40936156-40936175 Msa0951210:intron 20.0%
!! ATCTTAACTAACTTCAAATT+CGG - chr6_3:40936570-40936589 Msa0951210:intron 20.0%
!! ATAGTTTATTCAAAACGTAT+AGG + chr6_3:40936834-40936853 None:intergenic 20.0%
!!! GTATAAGGAGAAATTTTAAA+TGG + chr6_3:40937421-40937440 None:intergenic 20.0%
!! GTGATATAATCATATAACAT+AGG + chr6_3:40937665-40937684 None:intergenic 20.0%
!!! ATGATTATATCACAGTTTTA+AGG - chr6_3:40937672-40937691 Msa0951210:CDS 20.0%
!! ATGAATAGTCAATAAGTTAA+TGG + chr6_3:40937738-40937757 None:intergenic 20.0%
!!! TTTTGTGGTATTATTGTTTT+TGG - chr6_3:40937828-40937847 Msa0951210:intron 20.0%
!!! TATTATTGTTTTTGGTTGTT+CGG - chr6_3:40937836-40937855 Msa0951210:intron 20.0%
!!! TTTTGATTACTCTTAACATT+GGG + chr6_3:40938375-40938394 None:intergenic 20.0%
!!! TTTTTGATTACTCTTAACAT+TGG + chr6_3:40938376-40938395 None:intergenic 20.0%
!!! TCAAGTAGTATTATTGTTTT+TGG + chr6_3:40938400-40938419 None:intergenic 20.0%
!! AAAACAGTTAAGAATGATAT+GGG - chr6_3:40938454-40938473 Msa0951210:CDS 20.0%
!!! TCATTTTCTCAAATTATTAC+TGG + chr6_3:40938736-40938755 None:intergenic 20.0%
!! GAATTGAATGTAATCTTATA+TGG - chr6_3:40938754-40938773 Msa0951210:CDS 20.0%
!!! ATTTCATAAAATGGTAGTTT+TGG - chr6_3:40938981-40939000 Msa0951210:CDS 20.0%
! TTATGTTAAGTCTGTTATTC+CGG - chr6_3:40932367-40932386 Msa0951210:three_prime_UTR 25.0%
!! ACATGAGATTTTGAATCTTT+TGG - chr6_3:40932685-40932704 Msa0951210:intron 25.0%
!!! AAGGATAATGTTTTGATGAT+TGG - chr6_3:40932725-40932744 Msa0951210:intron 25.0%
! AAAAGAGGATAATTTGAAAG+AGG - chr6_3:40932982-40933001 Msa0951210:intron 25.0%
! AATCGAATTCTAACAATAGA+AGG - chr6_3:40933431-40933450 Msa0951210:intron 25.0%
! ATCGAATTCTAACAATAGAA+GGG - chr6_3:40933432-40933451 Msa0951210:intron 25.0%
! AATCGAATTCTAACAATAGA+AGG - chr6_3:40933431-40933450 Msa0951210:intron 25.0%
! ATCGAATTCTAACAATAGAA+GGG - chr6_3:40933432-40933451 Msa0951210:intron 25.0%
! AATCGAATTCTAACAATAGA+AGG - chr6_3:40933431-40933450 Msa0951210:intron 25.0%
! ATCGAATTCTAACAATAGAA+GGG - chr6_3:40933432-40933451 Msa0951210:intron 25.0%
! AATCGAATTCTAACAATAGA+AGG - chr6_3:40933431-40933450 Msa0951210:intron 25.0%
! ATCGAATTCTAACAATAGAA+GGG - chr6_3:40933432-40933451 Msa0951210:intron 25.0%
! AATCGAATTCTAACAATAGA+AGG - chr6_3:40933431-40933450 Msa0951210:intron 25.0%
! ATCGAATTCTAACAATAGAA+GGG - chr6_3:40933432-40933451 Msa0951210:intron 25.0%
! GATATATCTTCACTAAACAA+CGG + chr6_3:40933911-40933930 None:intergenic 25.0%
! AGATATATCTGTTACTCAAT+TGG - chr6_3:40933922-40933941 Msa0951210:intron 25.0%
! AATCATCAACAATTAATCCA+AGG + chr6_3:40934388-40934407 None:intergenic 25.0%
!!! GTTGATGATTAACTTATTTG+CGG - chr6_3:40934398-40934417 Msa0951210:intron 25.0%
!! TCCTTTTCATAGATAAGATT+AGG - chr6_3:40934524-40934543 Msa0951210:intron 25.0%
!! AAAGCAAAGTATCAGTTTAA+GGG - chr6_3:40934568-40934587 Msa0951210:intron 25.0%
! ATAATTGAGTTAACTTCACA+TGG + chr6_3:40934700-40934719 None:intergenic 25.0%
!!! AAAGTATTGAGTCACTTAAA+GGG + chr6_3:40935025-40935044 None:intergenic 25.0%
!!! TAAAGTATTGAGTCACTTAA+AGG + chr6_3:40935026-40935045 None:intergenic 25.0%
!!! TGTTTGGTTCAATTTTTAAG+AGG - chr6_3:40935528-40935547 Msa0951210:intron 25.0%
! AGAGATAACAAGGATAATTT+AGG + chr6_3:40935705-40935724 None:intergenic 25.0%
! CACTCGAATATAAATCAAAA+AGG + chr6_3:40936464-40936483 None:intergenic 25.0%
! AACAAATGGAACAAATTACA+AGG + chr6_3:40936505-40936524 None:intergenic 25.0%
! GAAGTTAGTTAAGATCTATA+GGG + chr6_3:40936565-40936584 None:intergenic 25.0%
! TGAAGTTAGTTAAGATCTAT+AGG + chr6_3:40936566-40936585 None:intergenic 25.0%
! TTTATTCAAAACGTATAGGA+AGG + chr6_3:40936830-40936849 None:intergenic 25.0%
! AAACCACTTGAAGAAAATAA+TGG + chr6_3:40937071-40937090 None:intergenic 25.0%
! AGCAAAATATATGAAACCTT+CGG - chr6_3:40937300-40937319 Msa0951210:intron 25.0%
! ATGCTTAACAACAATCAAAA+GGG - chr6_3:40937465-40937484 Msa0951210:intron 25.0%
! TTAAATCTATTTCAAAGGAG+CGG + chr6_3:40937530-40937549 None:intergenic 25.0%
! GAGTCTTAAATCTATTTCAA+AGG + chr6_3:40937535-40937554 None:intergenic 25.0%
!! CTTATTGACTATTCATCTTT+CGG - chr6_3:40937742-40937761 Msa0951210:CDS 25.0%
!!! GGATTGTTTTAATAGTTTTG+TGG - chr6_3:40937813-40937832 Msa0951210:intron 25.0%
!!! ATTACTCTAAAATTGGGATA+GGG - chr6_3:40937859-40937878 Msa0951210:intron 25.0%
!! TCCATATTTAGTGATTTGTA+TGG + chr6_3:40937971-40937990 None:intergenic 25.0%
! AATACTCAAGATAGAAAACT+CGG + chr6_3:40938006-40938025 None:intergenic 25.0%
! TAAATTTATACTCTAACGCA+TGG + chr6_3:40938329-40938348 None:intergenic 25.0%
!! TATCATTCTTAACTGTTTTC+TGG + chr6_3:40938453-40938472 None:intergenic 25.0%
! GAAAACAGTTAAGAATGATA+TGG - chr6_3:40938453-40938472 Msa0951210:CDS 25.0%
! TTGAATGTAATCTTATATGG+CGG - chr6_3:40938757-40938776 Msa0951210:CDS 25.0%
! AAAGAATGATATGGAAAAGA+AGG + chr6_3:40938801-40938820 None:intergenic 25.0%
! GGACATTCTATTTCATAAAA+TGG - chr6_3:40938972-40938991 Msa0951210:CDS 25.0%
! ATGATACTACAAATCTACAA+AGG - chr6_3:40939014-40939033 Msa0951210:CDS 25.0%
! TGATACTACAAATCTACAAA+GGG - chr6_3:40939015-40939034 Msa0951210:CDS 25.0%
! GATAATTAAGCAGAAATCAT+GGG + chr6_3:40939160-40939179 None:intergenic 25.0%
! AGATAATTAAGCAGAAATCA+TGG + chr6_3:40939161-40939180 None:intergenic 25.0%
!! TGTTGTTGATGGTTTGAAAT+GGG - chr6_3:40932325-40932344 Msa0951210:three_prime_UTR 30.0%
ACAGACTTAACATAATCATC+AGG + chr6_3:40932362-40932381 None:intergenic 30.0%
! TGGATAAGAAGTATGAGAAA+TGG - chr6_3:40932561-40932580 Msa0951210:CDS 30.0%
! GGATAAGAAGTATGAGAAAT+GGG - chr6_3:40932562-40932581 Msa0951210:CDS 30.0%
AAATTCACACCATTCTCATA+CGG + chr6_3:40932620-40932639 None:intergenic 30.0%
TTTATGTGTCGAGTAAGAAT+AGG - chr6_3:40932807-40932826 Msa0951210:intron 30.0%
GAGTAAGAATAGGATGTATA+CGG - chr6_3:40932817-40932836 Msa0951210:intron 30.0%
TCACTTGATGAATACTGTTA+AGG - chr6_3:40932916-40932935 Msa0951210:intron 30.0%
AAGAAAGATAAGGATGAGAA+GGG - chr6_3:40932947-40932966 Msa0951210:intron 30.0%
GATAATTTGAAAGAGGATGA+AGG - chr6_3:40932989-40933008 Msa0951210:intron 30.0%
AAATGAATTCTGCCAATAGA+AGG - chr6_3:40933197-40933216 Msa0951210:intron 30.0%
AATGAATTCTGCCAATAGAA+GGG - chr6_3:40933198-40933217 Msa0951210:intron 30.0%
AAACAAATTCTTCCGATAGA+AGG - chr6_3:40933236-40933255 Msa0951210:intron 30.0%
AACAAATTCTTCCGATAGAA+GGG - chr6_3:40933237-40933256 Msa0951210:intron 30.0%
ATCGAATTCTACCAATAGAA+GGG - chr6_3:40933276-40933295 Msa0951210:intron 30.0%
! AATCGAGTTCTAACAATAGA+AGG - chr6_3:40933353-40933372 Msa0951210:intron 30.0%
! ATCGAGTTCTAACAATAGAA+GGG - chr6_3:40933354-40933373 Msa0951210:intron 30.0%
AATCGAATTCTACCAATAGA+AGG - chr6_3:40933392-40933411 Msa0951210:intron 30.0%
ATCGAATTCTACCAATAGAA+GGG - chr6_3:40933276-40933295 Msa0951210:intron 30.0%
TCGAATTCTAACAATAGAAG+GGG - chr6_3:40933433-40933452 Msa0951210:intron 30.0%
TCGAATTCTAACAATAGAAG+GGG - chr6_3:40933433-40933452 Msa0951210:intron 30.0%
AATCAAATTCTGCCAATAGA+AGG - chr6_3:40933509-40933528 Msa0951210:intron 30.0%
ATCAAATTCTGCCAATAGAA+GGG - chr6_3:40933510-40933529 Msa0951210:intron 30.0%
TCGAATTCTAACAATAGAAG+GGG - chr6_3:40933433-40933452 Msa0951210:intron 30.0%
TCGAATTCTAACAATAGAAG+GGG - chr6_3:40933433-40933452 Msa0951210:intron 30.0%
TCGAATTCTAACAATAGAAG+GGG - chr6_3:40933433-40933452 Msa0951210:intron 30.0%
TCTAAAAGAATGCAAAAACC+AGG - chr6_3:40933805-40933824 Msa0951210:intron 30.0%
AAACCAGGTGAATATAAAGA+TGG - chr6_3:40933820-40933839 Msa0951210:intron 30.0%
CCAACATTCTCATAAAAAAC+AGG + chr6_3:40934057-40934076 None:intergenic 30.0%
!!! CCTGTTTTTTATGAGAATGT+TGG - chr6_3:40934054-40934073 Msa0951210:intron 30.0%
GCCTAATCTTATCTATGAAA+AGG + chr6_3:40934528-40934547 None:intergenic 30.0%
! GAAAGCAAAGTATCAGTTTA+AGG - chr6_3:40934567-40934586 Msa0951210:intron 30.0%
! AAGCAAAGTATCAGTTTAAG+GGG - chr6_3:40934569-40934588 Msa0951210:intron 30.0%
GACAAGAAGAAAGAAAACAT+GGG + chr6_3:40935060-40935079 None:intergenic 30.0%
TAAAATGCTATCAGTGTAGA+GGG + chr6_3:40935450-40935469 None:intergenic 30.0%
! TCTACACTGATAGCATTTTA+GGG - chr6_3:40935450-40935469 Msa0951210:intron 30.0%
!! GTTCAATTTTTAAGAGGAGA+GGG - chr6_3:40935534-40935553 Msa0951210:intron 30.0%
!! TTCAATTTTTAAGAGGAGAG+GGG - chr6_3:40935535-40935554 Msa0951210:intron 30.0%
AGCAATAAATGATGCTAGAA+GGG + chr6_3:40935588-40935607 None:intergenic 30.0%
TCCAAAAAACTCCAATTTGA+GGG + chr6_3:40935613-40935632 None:intergenic 30.0%
!!! TCAAATTGGAGTTTTTTGGA+GGG - chr6_3:40935613-40935632 Msa0951210:intron 30.0%
ACGTTAATTCAAGAATCTAC+AGG + chr6_3:40935887-40935906 None:intergenic 30.0%
GTCTTCGTGTTTGAATTATT+TGG + chr6_3:40935968-40935987 None:intergenic 30.0%
AGTATAGATATGCATAGACA+CGG - chr6_3:40936404-40936423 Msa0951210:intron 30.0%
GGAACAAATTACAAGGAAAA+TGG + chr6_3:40936498-40936517 None:intergenic 30.0%
TCGTAATTCACTCAAACAAA+TGG + chr6_3:40936519-40936538 None:intergenic 30.0%
GAGTGAATTACGAATATTTG+TGG - chr6_3:40936526-40936545 Msa0951210:intron 30.0%
AAAATACTTAGGTGATGTAG+CGG + chr6_3:40936741-40936760 None:intergenic 30.0%
TTGAATAAACTATGCTCTGT+TGG - chr6_3:40936841-40936860 Msa0951210:intron 30.0%
TGAATAAACTATGCTCTGTT+GGG - chr6_3:40936842-40936861 Msa0951210:intron 30.0%
ATGTGTGTGAAAAACTGTAT+TGG - chr6_3:40936878-40936897 Msa0951210:intron 30.0%
TTCTTCCCACTAAAGTTTAT+TGG - chr6_3:40936909-40936928 Msa0951210:intron 30.0%
TCTTGCCAATAAACTTTAGT+GGG + chr6_3:40936917-40936936 None:intergenic 30.0%
! AACAAAAGTGTATCTTGAAG+TGG + chr6_3:40936954-40936973 None:intergenic 30.0%
TGTATTTGCAAACATCTGTT+GGG - chr6_3:40937014-40937033 Msa0951210:intron 30.0%
! TCACCATTATTTTCTTCAAG+TGG - chr6_3:40937065-40937084 Msa0951210:intron 30.0%
ATATTGTGGAAGAGAAGAAA+GGG + chr6_3:40937227-40937246 None:intergenic 30.0%
TATATTGTGGAAGAGAAGAA+AGG + chr6_3:40937228-40937247 None:intergenic 30.0%
! ATGCATGGTAATGAAGTATA+AGG + chr6_3:40937436-40937455 None:intergenic 30.0%
GATGCTTAACAACAATCAAA+AGG - chr6_3:40937464-40937483 Msa0951210:intron 30.0%
TGCTTAACAACAATCAAAAG+GGG - chr6_3:40937466-40937485 Msa0951210:intron 30.0%
!! ATGGATATGCAATTTGTTGA+AGG + chr6_3:40937719-40937738 None:intergenic 30.0%
!! TGTTCGGATTACTCTAAAAT+TGG - chr6_3:40937852-40937871 Msa0951210:intron 30.0%
!! GTTCGGATTACTCTAAAATT+GGG - chr6_3:40937853-40937872 Msa0951210:intron 30.0%
!! GATTACTCTAAAATTGGGAT+AGG - chr6_3:40937858-40937877 Msa0951210:intron 30.0%
GCCATACAAATCACTAAATA+TGG - chr6_3:40937967-40937986 Msa0951210:intron 30.0%
TTACTCTTAACATTGGGATT+GGG + chr6_3:40938369-40938388 None:intergenic 30.0%
ATTACTCTTAACATTGGGAT+TGG + chr6_3:40938370-40938389 None:intergenic 30.0%
ACTACTTGAAACAATACATG+AGG - chr6_3:40938411-40938430 Msa0951210:CDS 30.0%
! CGACAATGTTTCTAATAAGA+AGG + chr6_3:40938540-40938559 None:intergenic 30.0%
TCAGCTCAAGGAAAATATAA+AGG - chr6_3:40938580-40938599 Msa0951210:intron 30.0%
TTGTTTGTGTTTCATAGTGA+AGG + chr6_3:40938679-40938698 None:intergenic 30.0%
ACAAGAAGCAAAGAATGATA+TGG + chr6_3:40938810-40938829 None:intergenic 30.0%
GATACTACAAATCTACAAAG+GGG - chr6_3:40939016-40939035 Msa0951210:CDS 30.0%
ACGTAAGACCATTATTTCAA+GGG + chr6_3:40939201-40939220 None:intergenic 30.0%
TACGTAAGACCATTATTTCA+AGG + chr6_3:40939202-40939221 None:intergenic 30.0%
! ATTCCTTTGAGTGTTGTTGA+TGG - chr6_3:40932314-40932333 Msa0951210:three_prime_UTR 35.0%
AAACCATCAACAACACTCAA+AGG + chr6_3:40932320-40932339 None:intergenic 35.0%
!! GTGTTGTTGATGGTTTGAAA+TGG - chr6_3:40932324-40932343 Msa0951210:three_prime_UTR 35.0%
!! TGTCGATAACAATGCTGTTT+TGG - chr6_3:40932418-40932437 Msa0951210:three_prime_UTR 35.0%
!!! TAACAATGCTGTTTTGGAAC+TGG - chr6_3:40932424-40932443 Msa0951210:three_prime_UTR 35.0%
TCGTGTTTGGAGAAGAAATA+TGG - chr6_3:40932473-40932492 Msa0951210:three_prime_UTR 35.0%
CGTGTTTGGAGAAGAAATAT+GGG - chr6_3:40932474-40932493 Msa0951210:three_prime_UTR 35.0%
GTGTTTGGAGAAGAAATATG+GGG - chr6_3:40932475-40932494 Msa0951210:three_prime_UTR 35.0%
AAATATGGGGATAAAGCGAA+AGG - chr6_3:40932488-40932507 Msa0951210:three_prime_UTR 35.0%
AATATGGGGATAAAGCGAAA+GGG - chr6_3:40932489-40932508 Msa0951210:three_prime_UTR 35.0%
AAAGGGAAAGGGATAGAATT+GGG - chr6_3:40932506-40932525 Msa0951210:three_prime_UTR 35.0%
! TCTTTTGGTGAGTAAGAAGA+CGG - chr6_3:40932700-40932719 Msa0951210:intron 35.0%
!!! ATGTTTTGATGATTGGTGAG+TGG - chr6_3:40932732-40932751 Msa0951210:intron 35.0%
! TTTAGCGTCGAAGTTTAAGA+GGG - chr6_3:40932760-40932779 Msa0951210:intron 35.0%
!!! TATACGGTTGTTTTGAGAGA+TGG - chr6_3:40932833-40932852 Msa0951210:intron 35.0%
!!! ATACGGTTGTTTTGAGAGAT+GGG - chr6_3:40932834-40932853 Msa0951210:intron 35.0%
!! TTTTGAGAGATGGGTATAAG+AGG - chr6_3:40932843-40932862 Msa0951210:intron 35.0%
TTTGAGAGATGGGTATAAGA+GGG - chr6_3:40932844-40932863 Msa0951210:intron 35.0%
! TTTGCTTGTTGAGGATAATC+CGG - chr6_3:40932868-40932887 Msa0951210:intron 35.0%
GGAAGATAGCAAGAAAGATA+AGG - chr6_3:40932937-40932956 Msa0951210:intron 35.0%
CAAGAAAGATAAGGATGAGA+AGG - chr6_3:40932946-40932965 Msa0951210:intron 35.0%
GGGAAAAACAAGTTCAAAAG+AGG - chr6_3:40932967-40932986 Msa0951210:intron 35.0%
TTTGAAAGAGGATGAAGGTA+AGG - chr6_3:40932994-40933013 Msa0951210:intron 35.0%
TAAAAGCTCTGCCAATAGAA+GGG - chr6_3:40933156-40933175 Msa0951210:intron 35.0%
ATGAATTCTGCCAATAGAAG+GGG - chr6_3:40933199-40933218 Msa0951210:intron 35.0%
ACAAATTCTTCCGATAGAAG+GGG - chr6_3:40933238-40933257 Msa0951210:intron 35.0%
AAAGTTTCTTCCCCTTCTAT+CGG + chr6_3:40933251-40933270 None:intergenic 35.0%
GATCGAATTCTACCAATAGA+AGG - chr6_3:40933275-40933294 Msa0951210:intron 35.0%
TCGAATTCTACCAATAGAAG+GGG - chr6_3:40933277-40933296 Msa0951210:intron 35.0%
AAAGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933251-40933270 None:intergenic 35.0%
AATCGAACTCTACCAATAGA+AGG - chr6_3:40933314-40933333 Msa0951210:intron 35.0%
ATCGAACTCTACCAATAGAA+GGG - chr6_3:40933315-40933334 Msa0951210:intron 35.0%
AAAGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933251-40933270 None:intergenic 35.0%
! TCGAGTTCTAACAATAGAAG+GGG - chr6_3:40933355-40933374 Msa0951210:intron 35.0%
TCGAATTCTACCAATAGAAG+GGG - chr6_3:40933277-40933296 Msa0951210:intron 35.0%
AAAGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933251-40933270 None:intergenic 35.0%
TCAAATTCTGCCAATAGAAG+GGG - chr6_3:40933511-40933530 Msa0951210:intron 35.0%
AAAGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933251-40933270 None:intergenic 35.0%
AACTCTGTGGAAATGAAGTT+AGG - chr6_3:40933694-40933713 Msa0951210:intron 35.0%
TCACCATCTTTATATTCACC+TGG + chr6_3:40933826-40933845 None:intergenic 35.0%
!! TTAGGCATTTGACTTGCATT+TGG - chr6_3:40934542-40934561 Msa0951210:intron 35.0%
AGTAGCAAGACACCATTATT+AGG - chr6_3:40934618-40934637 Msa0951210:intron 35.0%
CGACAAGAAGAAAGAAAACA+TGG + chr6_3:40935061-40935080 None:intergenic 35.0%
ACATAACAGAACGAAGAACA+AGG + chr6_3:40935238-40935257 None:intergenic 35.0%
CTAAAATGCTATCAGTGTAG+AGG + chr6_3:40935451-40935470 None:intergenic 35.0%
! CTCTACACTGATAGCATTTT+AGG - chr6_3:40935449-40935468 Msa0951210:intron 35.0%
!! GGTTCAATTTTTAAGAGGAG+AGG - chr6_3:40935533-40935552 Msa0951210:intron 35.0%
GAGCAATAAATGATGCTAGA+AGG + chr6_3:40935589-40935608 None:intergenic 35.0%
CAAAAAACTCCAATTTGAGG+GGG + chr6_3:40935611-40935630 None:intergenic 35.0%
CCAAAAAACTCCAATTTGAG+GGG + chr6_3:40935612-40935631 None:intergenic 35.0%
CTCCAAAAAACTCCAATTTG+AGG + chr6_3:40935614-40935633 None:intergenic 35.0%
!!! CTCAAATTGGAGTTTTTTGG+AGG - chr6_3:40935612-40935631 Msa0951210:intron 35.0%
!!! CAAATTGGAGTTTTTTGGAG+GGG - chr6_3:40935614-40935633 Msa0951210:intron 35.0%
! GGTTATGTTTGGTTCAAATG+GGG + chr6_3:40936254-40936273 None:intergenic 35.0%
! GGGTTATGTTTGGTTCAAAT+GGG + chr6_3:40936255-40936274 None:intergenic 35.0%
GTATAGATATGCATAGACAC+GGG - chr6_3:40936405-40936424 Msa0951210:intron 35.0%
AAATACTTAGGTGATGTAGC+GGG + chr6_3:40936740-40936759 None:intergenic 35.0%
! CACCTAAGTATTTTGTGAGT+TGG - chr6_3:40936747-40936766 Msa0951210:intron 35.0%
CTCTTGCCAATAAACTTTAG+TGG + chr6_3:40936918-40936937 None:intergenic 35.0%
TTATGTTGCAAAGTGTGTTG+TGG - chr6_3:40936986-40937005 Msa0951210:intron 35.0%
GTGTATTTGCAAACATCTGT+TGG - chr6_3:40937013-40937032 Msa0951210:intron 35.0%
! TCCACATTATTTTCATCGAG+TGG - chr6_3:40937095-40937114 Msa0951210:intron 35.0%
ACCACTCGATGAAAATAATG+TGG + chr6_3:40937099-40937118 None:intergenic 35.0%
TTGCTCTCTTGTTCAAGATT+TGG - chr6_3:40937137-40937156 Msa0951210:intron 35.0%
GTCCATAGTATTCTTTCTCA+TGG - chr6_3:40937182-40937201 Msa0951210:intron 35.0%
CACCATGAGAAAGAATACTA+TGG + chr6_3:40937187-40937206 None:intergenic 35.0%
! TATTTTGCTAGAACGAGCAT+TGG + chr6_3:40937289-40937308 None:intergenic 35.0%
AAGCATCATACAAACATGCA+TGG + chr6_3:40937451-40937470 None:intergenic 35.0%
!! TGTTTCACCGTTTGCTATTT+GGG + chr6_3:40937503-40937522 None:intergenic 35.0%
AAGCTAGAAGATTGATGTTG+CGG + chr6_3:40937574-40937593 None:intergenic 35.0%
AGCTTTCTGTAGTACCTTAT+AGG - chr6_3:40937589-40937608 Msa0951210:intron 35.0%
GCTTTCTGTAGTACCTTATA+GGG - chr6_3:40937590-40937609 Msa0951210:intron 35.0%
CTTTCTGTAGTACCTTATAG+GGG - chr6_3:40937591-40937610 Msa0951210:intron 35.0%
ATGAAACTAACGAATAGTGG+AGG + chr6_3:40937631-40937650 None:intergenic 35.0%
! TCCACTATTCGTTAGTTTCA+TGG - chr6_3:40937630-40937649 Msa0951210:intron 35.0%
TCCATGAAACTAACGAATAG+TGG + chr6_3:40937634-40937653 None:intergenic 35.0%
!! AATTTGTTGAAGGCTTCAGA+GGG + chr6_3:40937709-40937728 None:intergenic 35.0%
GTAGCAACATATTGTCTTGA+AGG + chr6_3:40938058-40938077 None:intergenic 35.0%
GAAGAACCAAAATCCATGAA+TGG + chr6_3:40938085-40938104 None:intergenic 35.0%
!!! TTCATGGATTTTGGTTCTTC+CGG - chr6_3:40938085-40938104 Msa0951210:intron 35.0%
!! TTGTATTTTGAACCAAGACG+AGG - chr6_3:40938484-40938503 Msa0951210:CDS 35.0%
!! TGTATTTTGAACCAAGACGA+GGG - chr6_3:40938485-40938504 Msa0951210:CDS 35.0%
! ATTTTCCTTGAGCTGAATCT+TGG + chr6_3:40938576-40938595 None:intergenic 35.0%
CTAGTACTAAGCTAAAGCAA+TGG + chr6_3:40938606-40938625 None:intergenic 35.0%
AGCAGTTAACTACTTTGGTT+TGG - chr6_3:40938653-40938672 Msa0951210:CDS 35.0%
TTTGTTCACAGAAACGCAAT+TGG - chr6_3:40938902-40938921 Msa0951210:CDS 35.0%
CCTGTAAGGTAAAAACTTGT+AGG + chr6_3:40939109-40939128 None:intergenic 35.0%
! CCTACAAGTTTTTACCTTAC+AGG - chr6_3:40939106-40939125 Msa0951210:CDS 35.0%
CAAACGTTAATTGACCTGTA+AGG + chr6_3:40939123-40939142 None:intergenic 35.0%
GACCATTATTTCAAGGGTAA+GGG + chr6_3:40939195-40939214 None:intergenic 35.0%
AGACCATTATTTCAAGGGTA+AGG + chr6_3:40939196-40939215 None:intergenic 35.0%
! GATGGTTTGAAATGGGATCT+TGG - chr6_3:40932332-40932351 Msa0951210:three_prime_UTR 40.0%
CCAACAACACGAAAATGATC+CGG + chr6_3:40932398-40932417 None:intergenic 40.0%
!!! CTGTTTTGGAACTGGTTTGT+TGG - chr6_3:40932432-40932451 Msa0951210:three_prime_UTR 40.0%
TTGTTGGAGTAAAGAACACG+CGG - chr6_3:40932448-40932467 Msa0951210:three_prime_UTR 40.0%
GAAAGGGAAAGGGATAGAAT+TGG - chr6_3:40932505-40932524 Msa0951210:three_prime_UTR 40.0%
! AGGGATAGAATTGGGTTTTC+CGG - chr6_3:40932514-40932533 Msa0951210:three_prime_UTR 40.0%
! TTTTCCGGTGCAATTTTCGA+CGG - chr6_3:40932529-40932548 Msa0951210:exon 40.0%
!!! ATTTTCGACGGGTTTTGAGA+TGG - chr6_3:40932541-40932560 Msa0951210:CDS 40.0%
GAAGTATGAGAAATGGGTGA+AGG - chr6_3:40932568-40932587 Msa0951210:CDS 40.0%
TATGTGAGTCCGTATGAGAA+TGG - chr6_3:40932608-40932627 Msa0951210:intron 40.0%
GAGAATGGTGTGAATTTGAG+TGG - chr6_3:40932623-40932642 Msa0951210:intron 40.0%
! TTTGATGATTGGTGAGTGGT+TGG - chr6_3:40932736-40932755 Msa0951210:intron 40.0%
! TTGATGATTGGTGAGTGGTT+GGG - chr6_3:40932737-40932756 Msa0951210:intron 40.0%
! GTTTAGCGTCGAAGTTTAAG+AGG - chr6_3:40932759-40932778 Msa0951210:intron 40.0%
GAAGTTTAAGAGGGTGATCT+TGG - chr6_3:40932769-40932788 Msa0951210:intron 40.0%
CTCGACACATAAAATATCCC+CGG + chr6_3:40932800-40932819 None:intergenic 40.0%
TTGAGAGATGGGTATAAGAG+GGG - chr6_3:40932845-40932864 Msa0951210:intron 40.0%
! AACTGTCGATGATGATGAAG+AGG - chr6_3:40933111-40933130 Msa0951210:intron 40.0%
GTAAAAGCTCTGCCAATAGA+AGG - chr6_3:40933155-40933174 Msa0951210:intron 40.0%
AAAAGCTCTGCCAATAGAAG+GGG - chr6_3:40933157-40933176 Msa0951210:intron 40.0%
!! GTTGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933170-40933189 None:intergenic 40.0%
TAGAAGGGGAAGAAACTTTG+AGG - chr6_3:40933252-40933271 Msa0951210:intron 40.0%
AGAAGGGGAAGAAACTTTGA+GGG - chr6_3:40933253-40933272 Msa0951210:intron 40.0%
TAGAAGGGGAAGAAACTTTG+AGG - chr6_3:40933252-40933271 Msa0951210:intron 40.0%
TCGAACTCTACCAATAGAAG+GGG - chr6_3:40933316-40933335 Msa0951210:intron 40.0%
TAGAAGGGGAAGAAACTTTG+AGG - chr6_3:40933252-40933271 Msa0951210:intron 40.0%
TAGAAGGGGAAGAAACTTAG+AGG - chr6_3:40933369-40933388 Msa0951210:intron 40.0%
TAGAAGGGGAAGAAACTTTG+AGG - chr6_3:40933252-40933271 Msa0951210:intron 40.0%
TAGAAGGGGAAGAAACTTTG+AGG - chr6_3:40933252-40933271 Msa0951210:intron 40.0%
AATCGAATTCTGCCAACAGA+AGG - chr6_3:40933665-40933684 Msa0951210:intron 40.0%
ATCGAATTCTGCCAACAGAA+GGG - chr6_3:40933666-40933685 Msa0951210:intron 40.0%
TTAGAGGATCTTGATCGTTG+CGG + chr6_3:40933856-40933875 None:intergenic 40.0%
! AAGATCCTCTAAAAGCAGAG+AGG - chr6_3:40933864-40933883 Msa0951210:intron 40.0%
! AGATCCTCTAAAAGCAGAGA+GGG - chr6_3:40933865-40933884 Msa0951210:intron 40.0%
AGTATTCATGCTTCGTTCCT+TGG - chr6_3:40934337-40934356 Msa0951210:intron 40.0%
! TTTTAGGCCACTCGTCATTT+AGG - chr6_3:40934669-40934688 Msa0951210:intron 40.0%
TTTAGGCCACTCGTCATTTA+GGG - chr6_3:40934670-40934689 Msa0951210:intron 40.0%
! ATGAATGTACGTGTCGATAG+CGG - chr6_3:40934786-40934805 Msa0951210:intron 40.0%
CACAATTTCACCGACATTCA+CGG + chr6_3:40934909-40934928 None:intergenic 40.0%
ACGTCTGCTATTAGAGTTTC+AGG - chr6_3:40934956-40934975 Msa0951210:intron 40.0%
CGTCTGCTATTAGAGTTTCA+GGG - chr6_3:40934957-40934976 Msa0951210:intron 40.0%
!! TTGCTCAGTTCTGTTGCTTT+AGG - chr6_3:40935212-40935231 Msa0951210:intron 40.0%
!!! ATAGCATTTTAGGGTCCGTT+TGG - chr6_3:40935459-40935478 Msa0951210:intron 40.0%
ATCAAAACCCGTGAACCAAA+CGG + chr6_3:40935477-40935496 None:intergenic 40.0%
!! TTTGGTTCACGGGTTTTGAT+GGG - chr6_3:40935477-40935496 Msa0951210:intron 40.0%
!! AATTTTTAAGAGGAGAGGGG+AGG - chr6_3:40935538-40935557 Msa0951210:intron 40.0%
!! ATTTTTAAGAGGAGAGGGGA+GGG - chr6_3:40935539-40935558 Msa0951210:intron 40.0%
TTTATTGCTCCCCCTCAAAT+TGG - chr6_3:40935599-40935618 Msa0951210:intron 40.0%
!!! CCCCTCAAATTGGAGTTTTT+TGG - chr6_3:40935609-40935628 Msa0951210:intron 40.0%
! ATGTTTGGTTCAAATGGGGA+GGG + chr6_3:40936250-40936269 None:intergenic 40.0%
! TATGTTTGGTTCAAATGGGG+AGG + chr6_3:40936251-40936270 None:intergenic 40.0%
! GGGGTTATGTTTGGTTCAAA+TGG + chr6_3:40936256-40936275 None:intergenic 40.0%
! TTCCTTGTACTTCGAGTTAG+AGG - chr6_3:40936703-40936722 Msa0951210:intron 40.0%
AATACTTAGGTGATGTAGCG+GGG + chr6_3:40936739-40936758 None:intergenic 40.0%
GGCCAACTCACAAAATACTT+AGG + chr6_3:40936752-40936771 None:intergenic 40.0%
TATTGGCAAGAGTCCCTTAT+TGG - chr6_3:40936926-40936945 Msa0951210:intron 40.0%
ATTGGCAAGAGTCCCTTATT+GGG - chr6_3:40936927-40936946 Msa0951210:intron 40.0%
TCTTGAAGTGGACCCAATAA+GGG + chr6_3:40936942-40936961 None:intergenic 40.0%
ATCTTGAAGTGGACCCAATA+AGG + chr6_3:40936943-40936962 None:intergenic 40.0%
TGAACAAGAGAGCAAAGAAC+TGG + chr6_3:40937132-40937151 None:intergenic 40.0%
GGACAACCCACTATTCATTT+CGG - chr6_3:40937158-40937177 Msa0951210:intron 40.0%
GACAACCCACTATTCATTTC+GGG - chr6_3:40937159-40937178 Msa0951210:intron 40.0%
ACAACCCACTATTCATTTCG+GGG - chr6_3:40937160-40937179 Msa0951210:intron 40.0%
ACTAAGGGGTCGATATATTG+TGG + chr6_3:40937241-40937260 None:intergenic 40.0%
ATATCGACCCCTTAGTATAG+TGG - chr6_3:40937245-40937264 Msa0951210:intron 40.0%
TATCGACCCCTTAGTATAGT+GGG - chr6_3:40937246-40937265 Msa0951210:intron 40.0%
CTAAAATTGCATGATGCCGA+AGG + chr6_3:40937319-40937338 None:intergenic 40.0%
!! GTGTTTCACCGTTTGCTATT+TGG + chr6_3:40937504-40937523 None:intergenic 40.0%
ATCTATTTCAAAGGAGCGGT+GGG + chr6_3:40937526-40937545 None:intergenic 40.0%
AATCTATTTCAAAGGAGCGG+TGG + chr6_3:40937527-40937546 None:intergenic 40.0%
TAGAATACATGGCCCCTATA+AGG + chr6_3:40937606-40937625 None:intergenic 40.0%
! TAGTGGAGGCATAGAATACA+TGG + chr6_3:40937617-40937636 None:intergenic 40.0%
!! CAATTTGTTGAAGGCTTCAG+AGG + chr6_3:40937710-40937729 None:intergenic 40.0%
TAAATTTGTACTCCTACGCG+TGG - chr6_3:40937899-40937918 Msa0951210:intron 40.0%
AATGTGAAATATCCACGCGT+AGG + chr6_3:40937914-40937933 None:intergenic 40.0%
! ACTCGACCATTCATGGATTT+TGG - chr6_3:40938076-40938095 Msa0951210:intron 40.0%
! TTCATGGTTTGTGGTTCTTC+CGG + chr6_3:40938124-40938143 None:intergenic 40.0%
GAAGAACCACAAACCATGAA+TGG - chr6_3:40938124-40938143 Msa0951210:intron 40.0%
GAAAGATGAAGCAACTGATG+TGG - chr6_3:40938169-40938188 Msa0951210:intron 40.0%
!!! CTGTTTTCTGGTTCTTCATC+CGG + chr6_3:40938441-40938460 None:intergenic 40.0%
!! GTATTTTGAACCAAGACGAG+GGG - chr6_3:40938486-40938505 Msa0951210:CDS 40.0%
!! TAGCCATACGAGGTTGATAA+AGG - chr6_3:40938512-40938531 Msa0951210:CDS 40.0%
!! AGCCATACGAGGTTGATAAA+GGG - chr6_3:40938513-40938532 Msa0951210:CDS 40.0%
TTGAACCAAGATTCAGCTCA+AGG - chr6_3:40938568-40938587 Msa0951210:CDS 40.0%
TCGACAGCAGTTAACTACTT+TGG - chr6_3:40938648-40938667 Msa0951210:CDS 40.0%
GTCCCTTACCCTTGAAATAA+TGG - chr6_3:40939190-40939209 Msa0951210:CDS 40.0%
GTCTGTTATTCCGGAGTTTC+CGG - chr6_3:40932376-40932395 Msa0951210:three_prime_UTR 45.0%
CGAAAATGATCCGGAAACTC+CGG + chr6_3:40932389-40932408 None:intergenic 45.0%
! CCGGATCATTTTCGTGTTGT+TGG - chr6_3:40932395-40932414 Msa0951210:three_prime_UTR 45.0%
GGGATAAAGCGAAAGGGAAA+GGG - chr6_3:40932495-40932514 Msa0951210:three_prime_UTR 45.0%
! TTTCCGGTGCAATTTTCGAC+GGG - chr6_3:40932530-40932549 Msa0951210:exon 45.0%
AAACCCGTCGAAAATTGCAC+CGG + chr6_3:40932536-40932555 None:intergenic 45.0%
ATGAGAAATGGGTGAAGGAG+TGG - chr6_3:40932573-40932592 Msa0951210:CDS 45.0%
GAATTTGAGTGGTTCGAGTG+AGG - chr6_3:40932634-40932653 Msa0951210:intron 45.0%
GAGTGAGGAATCGGATAAGT+GGG - chr6_3:40932649-40932668 Msa0951210:intron 45.0%
AATCGGATAAGTGGGTGGTT+GGG - chr6_3:40932657-40932676 Msa0951210:intron 45.0%
! TAAGAGGGGTTTGCTTGTTG+AGG - chr6_3:40932859-40932878 Msa0951210:intron 45.0%
ATAATCCGGCGATGGAGTTT+AGG - chr6_3:40932882-40932901 Msa0951210:intron 45.0%
GGATGAAGGTAAGGTAAGAG+AGG - chr6_3:40933003-40933022 Msa0951210:intron 45.0%
! TGTCGATGATGATGAAGAGG+AGG - chr6_3:40933114-40933133 Msa0951210:intron 45.0%
! TGATGATGAAGAGGAGGAGT+CGG - chr6_3:40933120-40933139 Msa0951210:intron 45.0%
CACGTTTCTTCCCCTTCTAT+TGG + chr6_3:40933212-40933231 None:intergenic 45.0%
CAATAGAAGGGGAAGAAACG+TGG - chr6_3:40933210-40933229 Msa0951210:intron 45.0%
TAGAAGGGGAAGAAGCTTTG+AGG - chr6_3:40933447-40933466 Msa0951210:intron 45.0%
TAGAAGGGGAAGAAACTTCG+AGG - chr6_3:40933486-40933505 Msa0951210:intron 45.0%
TAGAAGGGGAAGAAGCTTTG+AGG - chr6_3:40933447-40933466 Msa0951210:intron 45.0%
TAGAAGGGGAAGAAGCTTTG+AGG - chr6_3:40933447-40933466 Msa0951210:intron 45.0%
TAGAAGGGGAAGAAACTTCG+AGG - chr6_3:40933486-40933505 Msa0951210:intron 45.0%
TCGAATTCTGCCAACAGAAG+GGG - chr6_3:40933667-40933686 Msa0951210:intron 45.0%
AGAGTTTCTTCCCCTTCTGT+TGG + chr6_3:40933680-40933699 None:intergenic 45.0%
! GATCCTCTAAAAGCAGAGAG+GGG - chr6_3:40933866-40933885 Msa0951210:intron 45.0%
!! TAACCCCTCTCTGCTTTTAG+AGG + chr6_3:40933872-40933891 None:intergenic 45.0%
CTGTTACTCAATTGGTGTGC+AGG - chr6_3:40933930-40933949 Msa0951210:intron 45.0%
TACTCAATTGGTGTGCAGGT+TGG - chr6_3:40933934-40933953 Msa0951210:intron 45.0%
TTCATGCTTCGTTCCTTGGT+TGG - chr6_3:40934341-40934360 Msa0951210:intron 45.0%
TGGTTGCGTCTTCATCTCTT+AGG - chr6_3:40934361-40934380 Msa0951210:intron 45.0%
GTCTTCATCTCTTAGGTCCT+TGG - chr6_3:40934368-40934387 Msa0951210:intron 45.0%
! CGGTTTTCATAGTAGCAGAG+AGG - chr6_3:40934418-40934437 Msa0951210:intron 45.0%
TTGCTACTCGTTCATGCTCT+TGG - chr6_3:40934468-40934487 Msa0951210:intron 45.0%
TACTCGTTCATGCTCTTGGT+TGG - chr6_3:40934472-40934491 Msa0951210:intron 45.0%
TTAGGCCACTCGTCATTTAG+GGG - chr6_3:40934671-40934690 Msa0951210:intron 45.0%
GGCGCTATAACATGCAATAG+CGG - chr6_3:40934807-40934826 Msa0951210:intron 45.0%
GCGCTATAACATGCAATAGC+GGG - chr6_3:40934808-40934827 Msa0951210:intron 45.0%
CGTGAATGTCGGTGAAATTG+TGG - chr6_3:40934907-40934926 Msa0951210:intron 45.0%
AATGTCGGTGAAATTGTGGC+CGG - chr6_3:40934911-40934930 Msa0951210:intron 45.0%
CTAATAGCAGACGTGATACC+AGG + chr6_3:40934950-40934969 None:intergenic 45.0%
! TTTAGGGTCCGTTTGGTTCA+CGG - chr6_3:40935466-40935485 Msa0951210:intron 45.0%
!! GTTTGGTTCACGGGTTTTGA+TGG - chr6_3:40935476-40935495 Msa0951210:intron 45.0%
!! TTGGTTCACGGGTTTTGATG+GGG - chr6_3:40935478-40935497 Msa0951210:intron 45.0%
!! TTTTTAAGAGGAGAGGGGAG+GGG - chr6_3:40935540-40935559 Msa0951210:intron 45.0%
!!! ATTGGAGTTTTTTGGAGGGG+AGG - chr6_3:40935617-40935636 Msa0951210:intron 45.0%
!!! TTGGAGTTTTTTGGAGGGGA+GGG - chr6_3:40935618-40935637 Msa0951210:intron 45.0%
! TGTTTGGTTCAAATGGGGAG+GGG + chr6_3:40936249-40936268 None:intergenic 45.0%
! TCTGTTTGGCTCAAATGGAG+GGG + chr6_3:40936342-40936361 None:intergenic 45.0%
! GTCTGTTTGGCTCAAATGGA+GGG + chr6_3:40936343-40936362 None:intergenic 45.0%
! AAGGGTCTGTTTGGCTCAAA+TGG + chr6_3:40936347-40936366 None:intergenic 45.0%
CAAACAGACCCTTAGTAGGT+CGG - chr6_3:40936354-40936373 Msa0951210:intron 45.0%
! GCTTCGAGCTTTAATGTGCA+TGG - chr6_3:40936660-40936679 Msa0951210:intron 45.0%
CACAGCAGTGTAATCAATCG+TGG + chr6_3:40936791-40936810 None:intergenic 45.0%
AGAGAGCAAAGAACTGGTGT+AGG + chr6_3:40937126-40937145 None:intergenic 45.0%
TGGACCCCGAAATGAATAGT+GGG + chr6_3:40937167-40937186 None:intergenic 45.0%
ATGGACCCCGAAATGAATAG+TGG + chr6_3:40937168-40937187 None:intergenic 45.0%
TTGTGGAAGAGAAGAAAGGG+TGG + chr6_3:40937224-40937243 None:intergenic 45.0%
AAGACGCCCACTATACTAAG+GGG + chr6_3:40937255-40937274 None:intergenic 45.0%
GAAGACGCCCACTATACTAA+GGG + chr6_3:40937256-40937275 None:intergenic 45.0%
AGAAGACGCCCACTATACTA+AGG + chr6_3:40937257-40937276 None:intergenic 45.0%
GAGGAAGGAGTCATGTTGAA+AGG + chr6_3:40937379-40937398 None:intergenic 45.0%
! CATGACTCCTTCCTCCTTTT+CGG - chr6_3:40937384-40937403 Msa0951210:intron 45.0%
TGACCGACCCAAATAGCAAA+CGG - chr6_3:40937493-40937512 Msa0951210:intron 45.0%
!! TCACCGTTTGCTATTTGGGT+CGG + chr6_3:40937499-40937518 None:intergenic 45.0%
! TGAGTCTCCTGTCTTTTCGA+AGG - chr6_3:40937765-40937784 Msa0951210:CDS 45.0%
!! AGATTGGCCTTCGAAAAGAC+AGG + chr6_3:40937775-40937794 None:intergenic 45.0%
TGTTGCTACTCGACCATTCA+TGG - chr6_3:40938069-40938088 Msa0951210:intron 45.0%
GGTTCTTCCGGTAAGTCTTA+TGG - chr6_3:40938097-40938116 Msa0951210:intron 45.0%
! TTCCGGTAAGTCTTATGGAC+CGG - chr6_3:40938102-40938121 Msa0951210:intron 45.0%
TTCCGGTCCATAAGACTTAC+CGG + chr6_3:40938107-40938126 None:intergenic 45.0%
ACTCGACCATTCATGGTTTG+TGG + chr6_3:40938133-40938152 None:intergenic 45.0%
AGTTGCTACTCGACCATTCA+TGG + chr6_3:40938140-40938159 None:intergenic 45.0%
AACTGATGTGGATGAGACTC+TGG - chr6_3:40938181-40938200 Msa0951210:intron 45.0%
AAACAATACATGAGGCTCGC+CGG - chr6_3:40938419-40938438 Msa0951210:CDS 45.0%
GACCCTTTATCAACCTCGTA+TGG + chr6_3:40938518-40938537 None:intergenic 45.0%
! ATTACTGGTGTCAACGTGAC+AGG + chr6_3:40938721-40938740 None:intergenic 45.0%
CACAGAAACGCAATTGGCAT+CGG - chr6_3:40938908-40938927 Msa0951210:CDS 45.0%
TCTGAAAGAACAGGGCTGAT+CGG + chr6_3:40938948-40938967 None:intergenic 45.0%
ATCAGCCCTGTTCTTTCAGA+GGG - chr6_3:40938948-40938967 Msa0951210:CDS 45.0%
AGAACACGCGGTATCGTGTT+TGG - chr6_3:40932460-40932479 Msa0951210:three_prime_UTR 50.0%
GGGGATAAAGCGAAAGGGAA+AGG - chr6_3:40932494-40932513 Msa0951210:three_prime_UTR 50.0%
GAGTGGTTCGAGTGAGGAAT+CGG - chr6_3:40932640-40932659 Msa0951210:intron 50.0%
CGAGTGAGGAATCGGATAAG+TGG - chr6_3:40932648-40932667 Msa0951210:intron 50.0%
TGAGGAATCGGATAAGTGGG+TGG - chr6_3:40932652-40932671 Msa0951210:intron 50.0%
GAATCGGATAAGTGGGTGGT+TGG - chr6_3:40932656-40932675 Msa0951210:intron 50.0%
ATCGGATAAGTGGGTGGTTG+GGG - chr6_3:40932658-40932677 Msa0951210:intron 50.0%
GGTGAGTAAGAAGACGGAGA+AGG - chr6_3:40932706-40932725 Msa0951210:intron 50.0%
TGTTGAGGATAATCCGGCGA+TGG - chr6_3:40932874-40932893 Msa0951210:intron 50.0%
! GAAGAGCGTGACAAGAATCG+CGG - chr6_3:40933025-40933044 Msa0951210:intron 50.0%
! AAGAGCGTGACAAGAATCGC+GGG - chr6_3:40933026-40933045 Msa0951210:intron 50.0%
CAGAAGGGGAAGAAACTCTG+TGG - chr6_3:40933681-40933700 Msa0951210:intron 50.0%
TCTCTGCGAGAATCACTCGA+AGG + chr6_3:40933730-40933749 None:intergenic 50.0%
GATTCTCGCAGAGAGAGATC+AGG - chr6_3:40933736-40933755 Msa0951210:intron 50.0%
ATTCATCTCCCACGTTGACC+GGG + chr6_3:40933773-40933792 None:intergenic 50.0%
CATTCATCTCCCACGTTGAC+CGG + chr6_3:40933774-40933793 None:intergenic 50.0%
GATGAAGACGCAACCAACCA+AGG + chr6_3:40934357-40934376 None:intergenic 50.0%
GGATTCCCCTAAATGACGAG+TGG + chr6_3:40934679-40934698 None:intergenic 50.0%
TTCCACAGTCGTGGTTGTTG+TGG - chr6_3:40934883-40934902 Msa0951210:intron 50.0%
GTTGTTGTGGCCGTGAATGT+CGG - chr6_3:40934896-40934915 Msa0951210:intron 50.0%
ATGTCGGTGAAATTGTGGCC+GGG - chr6_3:40934912-40934931 Msa0951210:intron 50.0%
TTCCTTCTTCGTGTGCTCTG+CGG - chr6_3:40935085-40935104 Msa0951210:intron 50.0%
! TTAGGGTCCGTTTGGTTCAC+GGG - chr6_3:40935467-40935486 Msa0951210:intron 50.0%
!! TTCACGGGTTTTGATGGGGA+GGG - chr6_3:40935482-40935501 Msa0951210:intron 50.0%
!!! AGTTTTTTGGAGGGGAGGGA+AGG - chr6_3:40935622-40935641 Msa0951210:intron 50.0%
!!! GTTTTTTGGAGGGGAGGGAA+GGG - chr6_3:40935623-40935642 Msa0951210:intron 50.0%
!! AGATTTTAACGCGGAGGGGA+GGG + chr6_3:40936307-40936326 None:intergenic 50.0%
!! GGAGAGATTTTAACGCGGAG+GGG + chr6_3:40936311-40936330 None:intergenic 50.0%
!! GGGAGAGATTTTAACGCGGA+GGG + chr6_3:40936312-40936331 None:intergenic 50.0%
!! GGAGGGGAGAGATTTTAACG+CGG + chr6_3:40936316-40936335 None:intergenic 50.0%
! TTTGGCTCAAATGGAGGGGA+GGG + chr6_3:40936338-40936357 None:intergenic 50.0%
! GGTCTGTTTGGCTCAAATGG+AGG + chr6_3:40936344-40936363 None:intergenic 50.0%
GAGCCAAACAGACCCTTAGT+AGG - chr6_3:40936350-40936369 Msa0951210:intron 50.0%
CGACCTACTAAGGGTCTGTT+TGG + chr6_3:40936356-40936375 None:intergenic 50.0%
GGCCTCTAACTCGAAGTACA+AGG + chr6_3:40936708-40936727 None:intergenic 50.0%
! TGATGTAGCGGGGAGCAATA+TGG + chr6_3:40936729-40936748 None:intergenic 50.0%
CGTGGATAACAGAGCTACAG+CGG + chr6_3:40936773-40936792 None:intergenic 50.0%
! ACTCCTTCCTCCTTTTCGGT+GGG - chr6_3:40937388-40937407 Msa0951210:intron 50.0%
GATGTTGCGGTAAGTGTTCG+AGG + chr6_3:40937561-40937580 None:intergenic 50.0%
TGAAGGCTTCAGAGGGTGAA+TGG + chr6_3:40937702-40937721 None:intergenic 50.0%
ATGGCTAAAACCCCTCGTCT+TGG + chr6_3:40938499-40938518 None:intergenic 50.0%
GATCAGCCCTGTTCTTTCAG+AGG - chr6_3:40938947-40938966 Msa0951210:CDS 50.0%
! GTCCTCCCTCTGAAAGAACA+GGG + chr6_3:40938956-40938975 None:intergenic 50.0%
! TGTCCTCCCTCTGAAAGAAC+AGG + chr6_3:40938957-40938976 None:intergenic 50.0%
! GAGGGTGATCTTGGAGCATC+CGG - chr6_3:40932778-40932797 Msa0951210:intron 55.0%
! AGGGTGATCTTGGAGCATCC+GGG - chr6_3:40932779-40932798 Msa0951210:intron 55.0%
ATCCGGCGATGGAGTTTAGG+AGG - chr6_3:40932885-40932904 Msa0951210:intron 55.0%
CTCCTCCTAAACTCCATCGC+CGG + chr6_3:40932890-40932909 None:intergenic 55.0%
AGAGCGTGACAAGAATCGCG+GGG - chr6_3:40933027-40933046 Msa0951210:intron 55.0%
TCTCGCAGAGAGAGATCAGG+TGG - chr6_3:40933739-40933758 Msa0951210:intron 55.0%
CTCGCAGAGAGAGATCAGGT+GGG - chr6_3:40933740-40933759 Msa0951210:intron 55.0%
CAGAGAGAGATCAGGTGGGA+AGG - chr6_3:40933744-40933763 Msa0951210:intron 55.0%
GATCAGGTGGGAAGGTTACC+CGG - chr6_3:40933752-40933771 Msa0951210:intron 55.0%
GAAGGTTACCCGGTCAACGT+GGG - chr6_3:40933762-40933781 Msa0951210:intron 55.0%
!! GTTCACGGGTTTTGATGGGG+AGG - chr6_3:40935481-40935500 Msa0951210:intron 55.0%
!! TCACGGGTTTTGATGGGGAG+GGG - chr6_3:40935483-40935502 Msa0951210:intron 55.0%
!! GATTTTAACGCGGAGGGGAG+GGG + chr6_3:40936306-40936325 None:intergenic 55.0%
!! GAGATTTTAACGCGGAGGGG+AGG + chr6_3:40936308-40936327 None:intergenic 55.0%
!! GGGGAGAGATTTTAACGCGG+AGG + chr6_3:40936313-40936332 None:intergenic 55.0%
TTGGCTCAAATGGAGGGGAG+GGG + chr6_3:40936337-40936356 None:intergenic 55.0%
! GTTTGGCTCAAATGGAGGGG+AGG + chr6_3:40936339-40936358 None:intergenic 55.0%
! GACTCCTTCCTCCTTTTCGG+TGG - chr6_3:40937387-40937406 Msa0951210:intron 55.0%
! CTCCTTCCTCCTTTTCGGTG+GGG - chr6_3:40937389-40937408 Msa0951210:intron 55.0%
!! CGAGGGGTTTTAGCCATACG+AGG - chr6_3:40938502-40938521 Msa0951210:CDS 55.0%
!! TGGCGGTGTTGATGCTTCAG+CGG - chr6_3:40938774-40938793 Msa0951210:CDS 55.0%
AGCCCTGTTCTTTCAGAGGG+AGG - chr6_3:40938951-40938970 Msa0951210:CDS 55.0%
! GGGTGATCTTGGAGCATCCG+GGG - chr6_3:40932780-40932799 Msa0951210:intron 60.0%
CGGCGATGGAGTTTAGGAGG+AGG - chr6_3:40932888-40932907 Msa0951210:intron 60.0%
TGACAAGAATCGCGGGGAGG+AGG - chr6_3:40933033-40933052 Msa0951210:intron 60.0%
GGAAGAGGAAGGGAGCTGTG+AGG - chr6_3:40933054-40933073 Msa0951210:intron 60.0%
TGAAGAGGAGGAGTCGGCGA+CGG - chr6_3:40933126-40933145 Msa0951210:intron 60.0%
GGAAGGTTACCCGGTCAACG+TGG - chr6_3:40933761-40933780 Msa0951210:intron 60.0%
GGAAGAAGTAGCGCTGCCGA+TGG - chr6_3:40934829-40934848 Msa0951210:intron 60.0%
!! GAAGGTGTCACAGCGGCCAT+CGG + chr6_3:40934848-40934867 None:intergenic 60.0%
!! CCAGGCTGAAGGTGTCACAG+CGG + chr6_3:40934855-40934874 None:intergenic 60.0%
CGCTGTGACACCTTCAGCCT+GGG - chr6_3:40934853-40934872 Msa0951210:intron 60.0%
!! GAAAGCGTCTCCCAGGCTGA+AGG + chr6_3:40934866-40934885 None:intergenic 60.0%
!! GACTGTGGAAAGCGTCTCCC+AGG + chr6_3:40934873-40934892 None:intergenic 60.0%
GGAGACGCTTTCCACAGTCG+TGG - chr6_3:40934874-40934893 Msa0951210:intron 60.0%
GGCCACAACAACCACGACTG+TGG + chr6_3:40934888-40934907 None:intergenic 60.0%
GTGAAATTGTGGCCGGGTCG+TGG - chr6_3:40934918-40934937 Msa0951210:intron 60.0%
ACCAGGTTTGAGCCACGACC+CGG + chr6_3:40934933-40934952 None:intergenic 60.0%
TGCCGCAGAGCACACGAAGA+AGG + chr6_3:40935090-40935109 None:intergenic 60.0%
!! GGGTTTTGATGGGGAGGGGA+GGG - chr6_3:40935487-40935506 Msa0951210:intron 60.0%
TTAAGAGGAGAGGGGAGGGG+AGG - chr6_3:40935543-40935562 Msa0951210:intron 60.0%
TAAGAGGAGAGGGGAGGGGA+GGG - chr6_3:40935544-40935563 Msa0951210:intron 60.0%
TCAAATGGAGGGGAGGGGAG+GGG + chr6_3:40936332-40936351 None:intergenic 60.0%
CTCAAATGGAGGGGAGGGGA+GGG + chr6_3:40936333-40936352 None:intergenic 60.0%
!! GCACAGCGCCGACCTACTAA+GGG + chr6_3:40936365-40936384 None:intergenic 60.0%
CTTAGTAGGTCGGCGCTGTG+CGG - chr6_3:40936364-40936383 Msa0951210:intron 60.0%
AGCCCCACCGAAAAGGAGGA+AGG + chr6_3:40937394-40937413 None:intergenic 60.0%
CCTTAGCCCCACCGAAAAGG+AGG + chr6_3:40937398-40937417 None:intergenic 60.0%
! CCTCCTTTTCGGTGGGGCTA+AGG - chr6_3:40937395-40937414 Msa0951210:intron 60.0%
! TGGCCTTAGCCCCACCGAAA+AGG + chr6_3:40937401-40937420 None:intergenic 60.0%
!! GGCGGTGTTGATGCTTCAGC+GGG - chr6_3:40938775-40938794 Msa0951210:CDS 60.0%
GCGTGACAAGAATCGCGGGG+AGG - chr6_3:40933030-40933049 Msa0951210:intron 65.0%
GAATCGCGGGGAGGAGGAAG+AGG - chr6_3:40933039-40933058 Msa0951210:intron 65.0%
GCGGGGAGGAGGAAGAGGAA+GGG - chr6_3:40933044-40933063 Msa0951210:intron 65.0%
GAAGAGGAGGAGTCGGCGAC+GGG - chr6_3:40933127-40933146 Msa0951210:intron 65.0%
CCGCTGTGACACCTTCAGCC+TGG - chr6_3:40934852-40934871 Msa0951210:intron 65.0%
!! CGGGTTTTGATGGGGAGGGG+AGG - chr6_3:40935486-40935505 Msa0951210:intron 65.0%
AAGAGGAGAGGGGAGGGGAG+GGG - chr6_3:40935545-40935564 Msa0951210:intron 65.0%
AGGGGAGGGGAGGGGAAGAA+GGG - chr6_3:40935553-40935572 Msa0951210:intron 65.0%
TTAACGCGGAGGGGAGGGGA+GGG + chr6_3:40936302-40936321 None:intergenic 65.0%
TTTAACGCGGAGGGGAGGGG+AGG + chr6_3:40936303-40936322 None:intergenic 65.0%
GCTCAAATGGAGGGGAGGGG+AGG + chr6_3:40936334-40936353 None:intergenic 65.0%
!! CGCACAGCGCCGACCTACTA+AGG + chr6_3:40936366-40936385 None:intergenic 65.0%
CGCGGGGAGGAGGAAGAGGA+AGG - chr6_3:40933043-40933062 Msa0951210:intron 70.0%
GCCGGGTCGTGGCTCAAACC+TGG - chr6_3:40934929-40934948 Msa0951210:intron 70.0%
GAGGGGAGGGGAGGGGAAGA+AGG - chr6_3:40935552-40935571 Msa0951210:intron 70.0%
GGGGAGGGGAGGGGAAGAAG+GGG - chr6_3:40935554-40935573 Msa0951210:intron 70.0%
GGGGGGGGGGGGGTTATGTT+TGG + chr6_3:40936265-40936284 None:intergenic 70.0%
CGGAGGGGAGGGGAGGGATT+TGG + chr6_3:40936296-40936315 None:intergenic 70.0%
AGTAGGTCGGCGCTGTGCGG+CGG - chr6_3:40936367-40936386 Msa0951210:intron 70.0%
GGCGCTGTGCGGCGGTACAT+GGG - chr6_3:40936375-40936394 Msa0951210:intron 70.0%
CGGCGCTGTGCGGCGGTACA+TGG - chr6_3:40936374-40936393 Msa0951210:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 40932293 40939240 40932293 ID=Msa0951210;Name=Msa0951210
chr6_3 mRNA 40932293 40939240 40932293 ID=Msa0951210-mRNA-1;Parent=Msa0951210;Name=Msa0951210-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0.16|1|0|0|6|243|364
chr6_3 exon 40932293 40932620 40932293 ID=Msa0951210-mRNA-1:exon:9809;Parent=Msa0951210-mRNA-1
chr6_3 exon 40937646 40937817 40937646 ID=Msa0951210-mRNA-1:exon:9808;Parent=Msa0951210-mRNA-1
chr6_3 exon 40938379 40938595 40938379 ID=Msa0951210-mRNA-1:exon:9807;Parent=Msa0951210-mRNA-1
chr6_3 exon 40938602 40938814 40938602 ID=Msa0951210-mRNA-1:exon:9806;Parent=Msa0951210-mRNA-1
chr6_3 exon 40938827 40939071 40938827 ID=Msa0951210-mRNA-1:exon:9805;Parent=Msa0951210-mRNA-1
chr6_3 exon 40939078 40939240 40939078 ID=Msa0951210-mRNA-1:exon:9804;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40939078 40939240 40939078 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40938827 40939071 40938827 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40938602 40938814 40938602 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40938379 40938595 40938379 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40937646 40937817 40937646 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 CDS 40932536 40932620 40932536 ID=Msa0951210-mRNA-1:cds;Parent=Msa0951210-mRNA-1
chr6_3 three_prime_UTR 40932293 40932535 40932293 ID=Msa0951210-mRNA-1:three_prime_utr;Parent=Msa0951210-mRNA-1
Gene Sequence

>Msa0951210

ATGATTGCGAAAGGGAATAAGATTCCTTTGAGTGTTGTTGATGGTTTGAAATGGGATCTTGGTCTTCCTGATGATTATGTTAAGTCTGTTATTCCGGAGTTTCCGGATCATTTTCGTGTTGTTGGTGTCGATAACAATGCTGTTTTGGAACTGGTTTGTTGGAAACACGCGGTATCGTGTTTGGAGAAGAAATATGGGGATAAAGCGAAAGGGAAAGGGATAGAATTGGGTTTTCCGGTGCAATTTTCGACGGGTTTTGAGATGGATAAGAAGTATGAGAAATGGGTGAAGGAGTGGAATAGTTTGAAGTATGTGAGTCCGTATGAGAATGGTGTGAATTTGAGTGGTTCGAGTGAGGAATCGGATAAGTGGGTGGTTGGGGTTTTACATGAGATTTTGAATCTTTTGACGGAGAAGGATAATGTTTTGATGATTGGTGAGTGGTTGGGTTTAGCGTCGAAGTTTAAGAGGGTGATCTTGGAGCATCCGGGGATATTTTATGTGTCGAGTAAGAATAGGATGTATACGGTTGTTTTGAGAGATGGGTATAAGAGGGGTTTGCTTGTTGAGGATAATCCGGCGATGGAGTTTAGGAGGAGGTATATTCACTTGATGAATACTGAAGATAGCAAGAAAGATAAGGATGAGAAGGGAAAAACAAGTTCAAAAGAGGATAATTTGAAAGAGGATGAAGGTAAGGTAAGAGAGGAAGAGCGTGACAAGAATCGCGGGGAGGAGGAAGAGGAAGGGAGCTGTGAGGAGTTGTCTGATGATGAAGATGAAGATGTTAGTGAAACTGTCGATGATGATGAAGAGGAGGAGTCGGCGACGGGTACTCGTACTGAAAAACCTTCGAGTGATTCTCGCAGAGAGAGATCAGGTGGGAAGGTTACCCGGTCAACGTGGGAGATGAATGCATCAGAAGTGTCTAAAAGAATGCAAAAACCAGGTGAATATAAAGATGGTGAAAGTTCGCCGCAACGATCAAGATCCTCTAAAAGCAGAGAGGGAAACGCAATTGGCATCGGCGTGATTTTTTTCTCCGATCAGCCCTGTTCTTTCAGAGGGAGGACATTCTATTTCATAAAATGGTAG
Protein sequence

>Msa0951210

MIAKGNKIPLSVVDGLKWDLGLPDDYVKSVIPEFPDHFRVVGVDNNAVLELVCWKHAVSCLEKKYGDKAKGKGIELGFPVQFSTGFEMDKKYEKWVKEWNSLKYVSPYENGVNLSGSSEESDKWVVGVLHEILNLLTEKDNVLMIGEWLGLASKFKRVILEHPGIFYVSSKNRMYTVVLRDGYKRGLLVEDNPAMEFRRRYIHLMNTEDSKKDKDEKGKTSSKEDNLKEDEGKVREEERDKNRGEEEEEGSCEELSDDEDEDVSETVDDDEEEESATGTRTEKPSSDSRRERSGGKVTRSTWEMNASEVSKRMQKPGEYKDGESSPQRSRSSKSREGNAIGIGVIFFSDQPCSFRGRTFYFIKW*