AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358250 MtrunA17_Chr5g0397481 96.985 597 11 2 375 971 1 590 0.0 1159
Msa1358250 MtrunA17_Chr5g0397481 73.941 307 72 5 20 321 1 304 3.22e-141 434
Msa1358250 MtrunA17_Chr4g0035431 90.476 462 44 0 375 836 1 462 0.0 847
Msa1358250 MtrunA17_Chr4g0035431 70.033 307 84 5 20 321 1 304 1.19e-127 397
Msa1358250 MtrunA17_Chr4g0057761 43.137 408 215 5 375 767 3 408 2.45e-97 316
Msa1358250 MtrunA17_Chr4g0057761 36.137 321 176 11 18 316 1 314 1.58e-41 160
Msa1358250 MtrunA17_Chr5g0397491 77.273 154 33 1 384 535 6 159 2.58e-72 236
Msa1358250 MtrunA17_Chr5g0397491 84.962 133 20 0 29 161 6 138 5.51e-71 232
Msa1358250 MtrunA17_Chr7g0228641 31.839 223 151 1 533 754 95 317 1.35e-28 120
Msa1358250 MtrunA17_Chr1g0195941 70.732 41 12 0 368 408 54 94 7.38e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358250 AT5G27120.1 81.757 444 81 0 375 818 1 444 0.0 762
Msa1358250 AT5G27120.1 63.787 301 103 3 20 316 1 299 3.21e-117 370
Msa1358250 AT3G05060.1 80.537 447 87 0 375 821 2 448 0.0 758
Msa1358250 AT3G05060.1 62.458 301 107 3 20 316 2 300 5.25e-114 361
Msa1358250 AT5G27140.2 63.380 426 120 3 375 799 1 391 5.96e-176 519
Msa1358250 AT5G27140.2 46.729 321 122 6 20 335 1 277 1.09e-71 245
Msa1358250 AT5G27140.1 58.163 490 141 6 375 859 1 431 1.13e-174 516
Msa1358250 AT5G27140.1 46.584 322 119 8 20 335 1 275 2.39e-71 244
Msa1358250 AT1G56110.1 44.390 410 207 6 375 767 3 408 2.09e-106 341
Msa1358250 AT1G56110.1 36.223 323 173 13 18 316 1 314 1.37e-46 176
Msa1358250 AT3G12860.1 43.204 412 213 6 373 767 1 408 4.43e-103 331
Msa1358250 AT3G12860.1 34.796 319 179 11 20 316 3 314 2.88e-44 168
Msa1358250 AT1G60170.1 28.972 214 152 0 533 746 95 308 2.14e-21 99.4

Find 214 sgRNAs with CRISPR-Local

Find 643 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCTTATGATTTATTTAA+TGG 0.111511 tig0016220:+417556 Msa1358250:three_prime_UTR
AGTAAAGCTTTCTCAATTTC+AGG 0.162511 tig0016220:+408875 Msa1358250:CDS
ATGATATATAAGACCATATT+TGG 0.164834 tig0016220:-416475 None:intergenic
ACTTCTTTACACAGGATTTA+TGG 0.208613 tig0016220:+414656 Msa1358250:intron
AAAGAAAGAAAAGAAGAAAA+AGG 0.230780 tig0016220:+417143 Msa1358250:CDS
AACAAGCTCCCCAGTCAAAT+TGG 0.242849 tig0016220:-410476 None:intergenic
TTAATGGGGTAGGTCGTCTT+AGG 0.250550 tig0016220:+417572 Msa1358250:three_prime_UTR
AAAGAAGGAAAAGAAGAAAA+AGG 0.264932 tig0016220:+417023 Msa1358250:CDS
CCCAACCATAGCAGTCAAAT+TGG 0.271023 tig0016220:-416319 None:intergenic
CTGATATATTCTCAAACTTC+TGG 0.278126 tig0016220:-414898 None:intergenic
CAAAGACAGCATTGGCTATC+AGG 0.281768 tig0016220:+416559 Msa1358250:CDS
ATCCTTATGATTTATTTAAT+GGG 0.289216 tig0016220:+417557 Msa1358250:three_prime_UTR
ACCTTGCTCGTCCAGGCTAT+TGG 0.308212 tig0016220:+409918 Msa1358250:CDS
GCCATGAGGGTTCGAGAATA+TGG 0.315509 tig0016220:+409978 Msa1358250:CDS
GAGCTGAGAAGGCTCTCTTT+AGG 0.330425 tig0016220:+416427 Msa1358250:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.331075 tig0016220:+416173 Msa1358250:CDS
TGATCTTAGCGAAATCATTC+AGG 0.332797 tig0016220:+410013 Msa1358250:CDS
TGAAATTGGTGAACTAGATT+TGG 0.334002 tig0016220:+410357 Msa1358250:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.339411 tig0016220:+410330 Msa1358250:CDS
AGCTGAGAAGGCTCTCTTTA+GGG 0.345329 tig0016220:+416428 Msa1358250:CDS
ACCTTGATCGGCCAGACTAT+TGG 0.348269 tig0016220:+409750 Msa1358250:CDS
GGCATATCAGCAGCATCTTC+AGG 0.353786 tig0016220:-417354 None:intergenic
GGTAGTACCGTGCAGATTCT+TGG 0.357226 tig0016220:+416405 Msa1358250:CDS
GAAACTGGGGAATAACATTA+AGG 0.357812 tig0016220:+409293 Msa1358250:CDS
TTATCATATGCCTCTATCTT+GGG 0.358705 tig0016220:-416783 None:intergenic
ATATCTATGGGAACTGAAAT+TGG 0.360422 tig0016220:+410343 Msa1358250:CDS
AGGAAAGCTTTCTGAAGTTC+AGG 0.363092 tig0016220:+413817 Msa1358250:CDS
ATGTGTAGCTGATGCGAAAC+TGG 0.364897 tig0016220:+409278 Msa1358250:CDS
ACCATGATCGTCCAGGCTAT+TGG 0.367547 tig0016220:+415468 Msa1358250:CDS
TGAAGTTGGTGAACTAGATT+TGG 0.368410 tig0016220:+416200 Msa1358250:CDS
GCAGCTAGTTTGTTGATTGA+TGG 0.370776 tig0016220:+414932 Msa1358250:CDS
CTTATCATATGCCTCTATCT+TGG 0.380405 tig0016220:-416784 None:intergenic
CAACTTCATGTTCTGGCTCC+TGG 0.380541 tig0016220:-417215 None:intergenic
GAAGCTAGGTTCTTGATTGA+TGG 0.385766 tig0016220:+409198 Msa1358250:CDS
CAGTTGACGGAACTCATAAC+TGG 0.386655 tig0016220:+415201 Msa1358250:CDS
AATCTCGAAGGCAAAGAATT+AGG 0.387421 tig0016220:+416732 Msa1358250:CDS
AGAACTTACTAAAATCATTC+AGG 0.388638 tig0016220:+415566 Msa1358250:CDS
AACGCTGCCCCAACTTCCTC+TGG 0.396694 tig0016220:-410304 None:intergenic
GAATACATCTGCCAGGCTAT+TGG 0.397100 tig0016220:+409800 Msa1358250:CDS
AAACATGCTACTCCCAAATA+TGG 0.397940 tig0016220:+416462 Msa1358250:CDS
ATATATCATGCATCATTGAT+TGG 0.403489 tig0016220:+416489 Msa1358250:CDS
CGCAAGGTCTGTCAAGTTGA+TGG 0.404405 tig0016220:+415602 Msa1358250:CDS
CTTCATTGAGCACTTTGAAA+AGG 0.407262 tig0016220:-413796 None:intergenic
CTTCATCCAACAATTTGAAA+AGG 0.411047 tig0016220:-408854 None:intergenic
CGATTTGCGGGTTCTGCTAA+AGG 0.412920 tig0016220:+416756 Msa1358250:CDS
CCAATTTGACTGCTATGGTT+GGG 0.414603 tig0016220:+416319 Msa1358250:CDS
GCTATGGTTGGGGAGCTTGT+TGG 0.416805 tig0016220:+416330 Msa1358250:CDS
AAAGAATTAGGTCGATTTGC+GGG 0.418834 tig0016220:+416744 Msa1358250:CDS
TACTGCAGACTCTGCAAGAA+AGG 0.420932 tig0016220:+409006 Msa1358250:CDS
ACCATTGCACCCAATTTGAC+TGG 0.425520 tig0016220:+410466 Msa1358250:CDS
TGTTCACAGCAATGCTGTTA+TGG 0.427112 tig0016220:+415155 Msa1358250:CDS
GATTGTTTCTGAACCAAGGC+TGG 0.431179 tig0016220:+410627 Msa1358250:CDS
ACTTGACAGACCTTGCGTAT+TGG 0.437943 tig0016220:-415596 None:intergenic
AAGGATAGAAAGAAGGGAGC+TGG 0.441375 tig0016220:+416804 Msa1358250:CDS
AGACATGGCTCCGATGAGCC+TGG 0.442031 tig0016220:+415236 Msa1358250:CDS
TTCCAAAAGTGTTAAAATGT+TGG 0.449608 tig0016220:+413745 Msa1358250:CDS
TTCATCCAACAATTTGAAAA+GGG 0.449761 tig0016220:-408853 None:intergenic
GCTGTAGCTGATACGAAGTT+GGG 0.449844 tig0016220:+415013 Msa1358250:CDS
TTGGCATCTGCTATTCAATC+TGG 0.455867 tig0016220:+417440 Msa1358250:three_prime_UTR
AACAAAAGATATACCTTAGC+AGG 0.456722 tig0016220:-416840 None:intergenic
TTCATTGAGCACTTTGAAAA+GGG 0.457174 tig0016220:-413795 None:intergenic
GAAGTTGGGGACTATCATTA+AGG 0.458948 tig0016220:+415027 Msa1358250:CDS
AGTTCAAGGGCAAAATTTCT+CGG 0.467618 tig0016220:+416526 Msa1358250:CDS
AATTTGACTGGGGAGCTTGT+TGG 0.470859 tig0016220:+410478 Msa1358250:CDS
CAGTGCGGATGCTGCAAGAA+AGG 0.471034 tig0016220:+414690 Msa1358250:CDS
TTGGCAGATATTAGAGAGCT+AGG 0.471890 tig0016220:+410376 Msa1358250:CDS
AGAAAAGAAGAAGAAAAGGA+AGG 0.475695 tig0016220:+417245 Msa1358250:CDS
GGCTCTGTTCTCCAATCCCA+TGG 0.476474 tig0016220:-416613 None:intergenic
ACCCCATTAAATAAATCATA+AGG 0.477459 tig0016220:-417559 None:intergenic
ACAAGCTCCCCAGTCAAATT+GGG 0.478660 tig0016220:-410475 None:intergenic
AATTAGGCGGACACCTTGAT+CGG 0.481064 tig0016220:+409738 Msa1358250:intron
CTTTCTTGCAGCATCCGCAC+TGG 0.482863 tig0016220:-414689 None:intergenic
CTCTTTCGGAATATAGAGCT+CGG 0.484469 tig0016220:+410413 Msa1358250:CDS
AGCTGTAGCTGATACGAAGT+TGG 0.485755 tig0016220:+415012 Msa1358250:CDS
TTGAAAAGGGCGAAACCCGC+AGG 0.486202 tig0016220:-413782 None:intergenic
CAAGATAGAGGCATATGATA+AGG 0.489790 tig0016220:+416785 Msa1358250:CDS
GTGCTCGCCTCATTGCCCAT+GGG 0.492711 tig0016220:+416352 Msa1358250:CDS
ATATGATAAGGATAGAAAGA+AGG 0.493507 tig0016220:+416797 Msa1358250:CDS
CCAACCATAGCAGTCAAATT+GGG 0.494028 tig0016220:-416318 None:intergenic
CAATTTGACTGCTATGGTTG+GGG 0.494927 tig0016220:+416320 Msa1358250:CDS
GATTTGCGGGTTCTGCTAAA+GGG 0.495464 tig0016220:+416757 Msa1358250:CDS
AATTCTTTATACAGGACTCA+TGG 0.497638 tig0016220:+408972 Msa1358250:intron
CCCAGTCAAATTGGGTGCAA+TGG 0.498431 tig0016220:-410467 None:intergenic
TGATATATAAGACCATATTT+GGG 0.499043 tig0016220:-416474 None:intergenic
TGAAGACAACACCATGGGAT+TGG 0.499977 tig0016220:+416602 Msa1358250:CDS
ACCAATAGTCTGGCCGATCA+AGG 0.501999 tig0016220:-409751 None:intergenic
CCCAATTTGACTGCTATGGT+TGG 0.502179 tig0016220:+416318 Msa1358250:CDS
TGCACCCAATTTGACTGCTA+TGG 0.506074 tig0016220:+416314 Msa1358250:CDS
GGTGCTCGCCTCATTGCCCA+TGG 0.506735 tig0016220:+416351 Msa1358250:CDS
CAGAAGCTACAGAGGAAGCT+AGG 0.507232 tig0016220:+409184 Msa1358250:CDS
TCTATGATTATCTAAAGAGC+AGG 0.507685 tig0016220:+416280 Msa1358250:CDS
CAAGGTGTAAATAGAGCAAA+GGG 0.509219 tig0016220:-417658 None:intergenic
GTATTATTTGAAACTCCTGC+AGG 0.509814 tig0016220:+408825 Msa1358250:CDS
TATTAGAGAGCTAGGTGACC+AGG 0.511827 tig0016220:+410384 Msa1358250:CDS
AATTAGGTGGTCAAATTGAA+AGG 0.512138 tig0016220:+414872 Msa1358250:intron
CAAAGAATTAGGTCGATTTG+CGG 0.513905 tig0016220:+416743 Msa1358250:CDS
TGAATGATTTCGCTAAGATC+AGG 0.515561 tig0016220:-410011 None:intergenic
ACCAATAGCCTGGACGATCA+TGG 0.522254 tig0016220:-415469 None:intergenic
CGTCGAGTAAACCAATAGTC+TGG 0.522801 tig0016220:-409761 None:intergenic
GCAGATTCTTGGAGCTGAGA+AGG 0.524438 tig0016220:+416416 Msa1358250:CDS
GTACCACACATCTCCAGCCT+TGG 0.527269 tig0016220:-410640 None:intergenic
GGTGGACACCTTGCTCGTCC+AGG 0.527284 tig0016220:+409911 Msa1358250:intron
GAACAACTACTGAGCTAAAG+AGG 0.527288 tig0016220:-417486 None:intergenic
CTGCTATTCAATCTGGTGAA+TGG 0.528315 tig0016220:+417447 Msa1358250:three_prime_UTR
TAATGGGGTAGGTCGTCTTA+GGG 0.528679 tig0016220:+417573 Msa1358250:three_prime_UTR
TTGAAAAGGGCAAAACCTGC+AGG 0.531819 tig0016220:-408840 None:intergenic
AGCAGTCAAATTGGGTGCAA+TGG 0.533807 tig0016220:-416310 None:intergenic
TACCTCTCTTGAGCAGCTAC+CGG 0.534333 tig0016220:-407952 None:intergenic
AGGATAATATTCAATATGCA+AGG 0.534458 tig0016220:+410033 Msa1358250:CDS
AGAGACACAGATTTGAATGC+AGG 0.535080 tig0016220:+417297 Msa1358250:CDS
CAATACACAGACCAATAGCC+TGG 0.535796 tig0016220:-409811 None:intergenic
TAAAGGGAAGCCCAAGATAG+AGG 0.536666 tig0016220:+416773 Msa1358250:CDS
GACATGGCTCCGATGAGCCT+GGG 0.541122 tig0016220:+415237 Msa1358250:CDS
CCATTGCACCCAATTTGACT+GGG 0.544468 tig0016220:+410467 Msa1358250:CDS
ATAAATCTTGCAAAGCAGCC+TGG 0.545223 tig0016220:+416384 Msa1358250:CDS
GGGTTCGAGAATGGTATGGC+TGG 0.545668 tig0016220:+415535 Msa1358250:CDS
ATGCCATGAGGGTTCGAGAA+TGG 0.547091 tig0016220:+415526 Msa1358250:CDS
GCGGAATGGAACATGCAGAT+TGG 0.548923 tig0016220:+417421 Msa1358250:three_prime_UTR
TCAAGCAGCTCCAAAGTTCA+AGG 0.549296 tig0016220:+416512 Msa1358250:CDS
ATTCCGAAAGAGATAAAACT+TGG 0.550920 tig0016220:-416245 None:intergenic
TGAGCAGCTACCGGAGGGGA+TGG 0.553222 tig0016220:-407943 None:intergenic
AATGAGAACTCCATCCCCTC+CGG 0.555194 tig0016220:+407933 None:intergenic
GCCATATTCTCGAACCCTCA+TGG 0.556332 tig0016220:-409979 None:intergenic
CGTCAAGTAAACCAATAGCC+TGG 0.556425 tig0016220:-409929 None:intergenic
AGGTATTCGATTTCAGTTGA+CGG 0.556860 tig0016220:+415188 Msa1358250:CDS
CTAGGATTGTTTCTGAACCA+AGG 0.557174 tig0016220:+410623 Msa1358250:intron
ATTCTTTATACAGGACTCAT+GGG 0.558037 tig0016220:+408973 Msa1358250:intron
CGTCGAGTAAACCAATAGCC+TGG 0.559795 tig0016220:-415479 None:intergenic
TTTATGATTATCTCAAGAGT+AGG 0.560116 tig0016220:+410437 Msa1358250:CDS
TATGATTTATTTAATGGGGT+AGG 0.560475 tig0016220:+417562 Msa1358250:three_prime_UTR
CATTGTCACAATGAGGAAGC+AGG 0.562702 tig0016220:-409248 None:intergenic
TATGATAAGGATAGAAAGAA+GGG 0.562992 tig0016220:+416798 Msa1358250:CDS
AGAATCTGCACGGTACTACC+AGG 0.563552 tig0016220:-416402 None:intergenic
TGAGGGTTCGAGAATATGGC+TGG 0.567750 tig0016220:+409982 Msa1358250:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568195 tig0016220:+410331 Msa1358250:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568328 tig0016220:+416174 Msa1358250:CDS
GCAAGGTGTAAATAGAGCAA+AGG 0.569224 tig0016220:-417659 None:intergenic
GCTATCAGGTGTGATGCACT+TGG 0.570354 tig0016220:+416573 Msa1358250:CDS
TGCAGCTTGAAGCGCGATTG+AGG 0.572330 tig0016220:+416709 Msa1358250:intron
TCCTTATGATTTATTTAATG+GGG 0.572898 tig0016220:+417558 Msa1358250:three_prime_UTR
TGATTATCTCAAGAGTAGGA+TGG 0.573495 tig0016220:+410441 Msa1358250:CDS
AAGAGTTGAATACATCTGCC+AGG 0.573822 tig0016220:+409793 Msa1358250:CDS
GCAAGGTCTGTCAAGTTGAT+GGG 0.574951 tig0016220:+415603 Msa1358250:CDS
TCTCTTGAGCAGCTACCGGA+GGG 0.576583 tig0016220:-407948 None:intergenic
CTCTCTTGAGCAGCTACCGG+AGG 0.578766 tig0016220:-407949 None:intergenic
CTTTACACAGGATTTATGGA+AGG 0.579685 tig0016220:+414660 Msa1358250:intron
TGAAAAGGGCGAAACCCGCA+GGG 0.581689 tig0016220:-413781 None:intergenic
GCTTGCTGCAAAGACAGCAT+TGG 0.582410 tig0016220:+416551 Msa1358250:CDS
TGCTCGCCTCATTGCCCATG+GGG 0.582657 tig0016220:+416353 Msa1358250:CDS
ATATCTATGGGTACTGAAGT+TGG 0.583455 tig0016220:+416186 Msa1358250:CDS
TGAGACAAACCCAGGCTCAT+CGG 0.584661 tig0016220:-415246 None:intergenic
ACTTTGCAAGCTGATGTAGA+TGG 0.587306 tig0016220:+417189 Msa1358250:CDS
ATACCATTCTCGAACCCTCA+TGG 0.587900 tig0016220:-415529 None:intergenic
ACCAATAGCCTGGACGAGCA+AGG 0.589368 tig0016220:-409919 None:intergenic
GATTGATGGAAAAGCTAGCA+AGG 0.589549 tig0016220:+414946 Msa1358250:CDS
CTCCGGTAGCTGCTCAAGAG+AGG 0.589629 tig0016220:+407950 Msa1358250:CDS
ATGTTCCATTCCGCTCTAGT+CGG 0.590834 tig0016220:-417412 None:intergenic
TGTGTAGCTGATGCGAAACT+GGG 0.599064 tig0016220:+409279 Msa1358250:CDS
GATAGAAAGAAGGGAGCTGG+AGG 0.601173 tig0016220:+416807 Msa1358250:CDS
ATTGATGGAAAAGCTAGCAA+AGG 0.607482 tig0016220:+409213 Msa1358250:CDS
ATTCCGAAAGAGATAAAACC+TGG 0.609367 tig0016220:-410402 None:intergenic
AGCTGATGTAGATGGTGACC+AGG 0.610256 tig0016220:+417197 Msa1358250:CDS
TCCACCTCAGTATTCTCAGT+AGG 0.610509 tig0016220:-417270 None:intergenic
GGTTGACACCATGATCGTCC+AGG 0.612729 tig0016220:+415461 Msa1358250:intron
GTACTGTTTGAAACCCCTGC+GGG 0.613719 tig0016220:+413767 Msa1358250:CDS
AGGTGTGATGCACTTGGAGA+TGG 0.614670 tig0016220:+416579 Msa1358250:CDS
ATGTATTCAACTCTTTATCG+AGG 0.616968 tig0016220:-415503 None:intergenic
AAATGCCGACTAGAGCGGAA+TGG 0.618389 tig0016220:+417407 Msa1358250:exon
GTTGAATACATATGCCATGA+GGG 0.622022 tig0016220:+415515 Msa1358250:CDS
CTCAGCTCCAAGAATCTGCA+CGG 0.622477 tig0016220:-416412 None:intergenic
TGCAAGGGCAGTCAAGCTGA+TGG 0.623680 tig0016220:+410049 Msa1358250:CDS
CAAGCAGCTCCAAAGTTCAA+GGG 0.624371 tig0016220:+416513 Msa1358250:CDS
ATGAGGGTTCGAGAATGGTA+TGG 0.625343 tig0016220:+415531 Msa1358250:CDS
AGTATTGACCTTGTGGATTG+CGG 0.628657 tig0016220:-413626 None:intergenic
GAATATATCAGAAGCTACAG+AGG 0.630088 tig0016220:+409176 Msa1358250:CDS
GAATATATCAGAAGCTACAG+AGG 0.630088 tig0016220:+414910 Msa1358250:CDS
AGGACTGATAACTCCTGCTA+AGG 0.630812 tig0016220:+416827 Msa1358250:CDS
AGCAGCATCTTCAGGCTCTG+AGG 0.630929 tig0016220:-417346 None:intergenic
GTTGAATGCATATGCCATGA+GGG 0.635503 tig0016220:+409965 Msa1358250:CDS
TGGCCTCGCTGTTCAAGACA+TGG 0.636384 tig0016220:+415221 Msa1358250:CDS
GTTGAAGTTCAGTGCAGACA+AGG 0.637677 tig0016220:+415287 Msa1358250:CDS
TTGCTAACTTAAGATCAGCA+AGG 0.639367 tig0016220:-417676 None:intergenic
GGATAATATTCAATATGCAA+GGG 0.639698 tig0016220:+410034 Msa1358250:CDS
ACCTACTGAGAATACTGAGG+TGG 0.641535 tig0016220:+417269 Msa1358250:CDS
CTGTAGCTGATACGAAGTTG+GGG 0.642131 tig0016220:+415014 Msa1358250:CDS
ATAGACTATGAGACAAACCC+AGG 0.642701 tig0016220:-415254 None:intergenic
CTCTTGAGCAGCTACCGGAG+GGG 0.644199 tig0016220:-407947 None:intergenic
GCTGGAGATGTGTGGTACAA+TGG 0.644360 tig0016220:+410645 Msa1358250:CDS
AGGATAATATCCAATACGCA+AGG 0.653312 tig0016220:+415586 Msa1358250:CDS
GCTGCACACCGCAATCCACA+AGG 0.653882 tig0016220:+413618 Msa1358250:CDS
CTTTATACAGGACTCATGGG+AGG 0.655695 tig0016220:+408976 Msa1358250:intron
AACGTCTCATTGTCACAATG+AGG 0.656598 tig0016220:-409255 None:intergenic
GATGGTGAAGACAACACCAT+GGG 0.656945 tig0016220:+416597 Msa1358250:CDS
AGTTGAATGCATATGCCATG+AGG 0.660976 tig0016220:+409964 Msa1358250:CDS
ATTGATGGAAAAGCTAGCAA+GGG 0.667037 tig0016220:+414947 Msa1358250:CDS
AGTTGAATACATATGCCATG+AGG 0.670426 tig0016220:+415514 Msa1358250:CDS
GGGATTGGAGAACAGAGCCA+AGG 0.677522 tig0016220:+416617 Msa1358250:CDS
GCTCGCCTCATTGCCCATGG+GGG 0.687875 tig0016220:+416354 Msa1358250:CDS
GCGCGATTGAGGAATCTCGA+AGG 0.689896 tig0016220:+416720 Msa1358250:CDS
CATTGCACCCAATTTGACTG+GGG 0.691074 tig0016220:+410468 Msa1358250:CDS
CATTATCACAATGAGCACGC+AGG 0.694162 tig0016220:-414982 None:intergenic
TGCAGAGCTCGATTTCTCTG+AGG 0.700222 tig0016220:+410088 Msa1358250:CDS
GAAAAGGGCGAAACCCGCAG+GGG 0.700713 tig0016220:-413780 None:intergenic
TGCAAAGCTTGATTTCTCCG+AGG 0.702184 tig0016220:+415641 Msa1358250:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 tig0016220:+409441 Msa1358250:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 tig0016220:+415168 Msa1358250:CDS
AGATGGTGAAGACAACACCA+TGG 0.721514 tig0016220:+416596 Msa1358250:CDS
GAACCAAGGCTGGAGATGTG+TGG 0.726071 tig0016220:+410637 Msa1358250:CDS
GGTACTGTTTGAAACCCCTG+CGG 0.734058 tig0016220:+413766 Msa1358250:CDS
GGAACCTACTGAGAATACTG+AGG 0.738690 tig0016220:+417266 Msa1358250:CDS
AGTCAAGTTCGTGAGCAGCG+AGG 0.738868 tig0016220:-410507 None:intergenic
GATTGCGGTGTGCAGCAGAG+CGG 0.740149 tig0016220:-413611 None:intergenic
GTGTAGCTGATGCGAAACTG+GGG 0.746718 tig0016220:+409280 Msa1358250:CDS
GAGCCATGTCTTGAACAGCG+AGG 0.799226 tig0016220:-415224 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATATTCTAATCATTT+CGG - tig0016220:408467-408486 None:intergenic 10.0%
!!! TTATAAATTTCATTTTTTGA+GGG - tig0016220:408541-408560 None:intergenic 10.0%
!!! TTTATAAATTTCATTTTTTG+AGG - tig0016220:408542-408561 None:intergenic 10.0%
!! GTAAAAAAATAAATTAAACA+TGG + tig0016220:412462-412481 Msa1358250:intron 10.0%
!! TAATGATTTAATTAAATGTA+GGG - tig0016220:412622-412641 None:intergenic 10.0%
!! ATAATGATTTAATTAAATGT+AGG - tig0016220:412623-412642 None:intergenic 10.0%
!! TAAAATATCTTTACAAATAA+GGG + tig0016220:412772-412791 Msa1358250:intron 10.0%
!!! CAAAATTTGTTAAAATTATA+GGG - tig0016220:412927-412946 None:intergenic 10.0%
!!! TCAAAATTTGTTAAAATTAT+AGG - tig0016220:412928-412947 None:intergenic 10.0%
!!! AAATAAACAAAAATTTTACA+AGG + tig0016220:413061-413080 Msa1358250:intron 10.0%
!!! AAGTCATAAAAATTAATTTT+TGG + tig0016220:413150-413169 Msa1358250:intron 10.0%
!!! AGTCATAAAAATTAATTTTT+GGG + tig0016220:413151-413170 Msa1358250:intron 10.0%
!! CAAAATTCTAAATATTTATA+GGG - tig0016220:413194-413213 None:intergenic 10.0%
!! ACAAAATTCTAAATATTTAT+AGG - tig0016220:413195-413214 None:intergenic 10.0%
!! ACAAAATTATGTATATTTAT+AGG + tig0016220:413412-413431 Msa1358250:intron 10.0%
!! CAAAATTATGTATATTTATA+GGG + tig0016220:413413-413432 Msa1358250:intron 10.0%
!!! CTATTTCTTTATAAAATTAA+GGG - tig0016220:413456-413475 None:intergenic 10.0%
!!! CTTAATTTTATAAAGAAATA+GGG + tig0016220:413455-413474 Msa1358250:intron 10.0%
!!! TTAATTTTATAAAGAAATAG+GGG + tig0016220:413456-413475 Msa1358250:intron 10.0%
!!! TTTTTTTCCAAAAAAAAAAA+AGG - tig0016220:414092-414111 None:intergenic 10.0%
!! TAAATATTATTTGTTTAAAG+AGG - tig0016220:415851-415870 None:intergenic 10.0%
!!! CAAAATTTTAGATATTTACA+TGG - tig0016220:408336-408355 None:intergenic 15.0%
!!! TATAAATTTCATTTTTTGAG+GGG - tig0016220:408540-408559 None:intergenic 15.0%
!! TTATACAAAATTCTTTATAC+AGG + tig0016220:408964-408983 Msa1358250:intron 15.0%
!!! ACCTTAAAATGATTTTTATT+AGG + tig0016220:409890-409909 Msa1358250:intron 15.0%
!!! ACCTAATAAAAATCATTTTA+AGG - tig0016220:409894-409913 None:intergenic 15.0%
!!! TTAAAATGATTTTTATTAGG+TGG + tig0016220:409893-409912 Msa1358250:intron 15.0%
!!! AAATGTCTTTTTTTTTTTGA+GGG - tig0016220:411679-411698 None:intergenic 15.0%
!!! AAAATGTCTTTTTTTTTTTG+AGG - tig0016220:411680-411699 None:intergenic 15.0%
!!! CTAAAGTTTTTAAATGTTTT+GGG - tig0016220:411822-411841 None:intergenic 15.0%
!!! ACTAAAGTTTTTAAATGTTT+TGG - tig0016220:411823-411842 None:intergenic 15.0%
!!! TAAAAATTAAAAAAGCACAA+TGG + tig0016220:411926-411945 Msa1358250:intron 15.0%
!!! TTTGTTTGAAATAATAGATA+AGG - tig0016220:412304-412323 None:intergenic 15.0%
!! ATCAAAAATAGATTAAATCA+AGG + tig0016220:412437-412456 Msa1358250:intron 15.0%
!! GTAAAATATCTTTACAAATA+AGG + tig0016220:412771-412790 Msa1358250:intron 15.0%
!!! AAAACAAAAATTTTACAAGA+TGG - tig0016220:412842-412861 None:intergenic 15.0%
!!! TTGTAATTTAAAGCTTTTTT+TGG + tig0016220:412873-412892 Msa1358250:intron 15.0%
!!! AATTTTAAGATTTTTGGTTT+TGG - tig0016220:413030-413049 None:intergenic 15.0%
!! CAAGTAATTATTTGTAATAT+AGG - tig0016220:413103-413122 None:intergenic 15.0%
!!! CCTATTTCTTTATAAAATTA+AGG - tig0016220:413457-413476 None:intergenic 15.0%
!!! CCTTAATTTTATAAAGAAAT+AGG + tig0016220:413454-413473 Msa1358250:intron 15.0%
!! GATACAACTAAAAAAAAAAA+GGG - tig0016220:414289-414308 None:intergenic 15.0%
!! ACTGAGTAATTAAAATTTAA+GGG - tig0016220:414374-414393 None:intergenic 15.0%
!! TACTGAGTAATTAAAATTTA+AGG - tig0016220:414375-414394 None:intergenic 15.0%
!!! TTTTTTTTCGATAATTGAAT+CGG - tig0016220:416944-416963 None:intergenic 15.0%
!! ATCCTTATGATTTATTTAAT+GGG + tig0016220:417557-417576 Msa1358250:three_prime_UTR 15.0%
!!! ACTTGTTGTAATTTTTTAGA+GGG - tig0016220:408366-408385 None:intergenic 20.0%
!!! AACTTGTTGTAATTTTTTAG+AGG - tig0016220:408367-408386 None:intergenic 20.0%
!! AAACAGTGAAATGAAATATT+CGG - tig0016220:408398-408417 None:intergenic 20.0%
!!! TGTTTTTAAATCAATTCATG+TGG + tig0016220:408413-408432 Msa1358250:intron 20.0%
!! ACACGATAACATATATAATA+AGG + tig0016220:408703-408722 Msa1358250:intron 20.0%
!! AATAACATTAAGGAAAAACT+GGG + tig0016220:409303-409322 Msa1358250:CDS 20.0%
!!! CTTTTTTTTTTTTTTGTTGC+CGG + tig0016220:409668-409687 Msa1358250:intron 20.0%
!!! TCCTGACATTTTTTTTAATT+AGG + tig0016220:409722-409741 Msa1358250:intron 20.0%
!!! TGACATTTTTTTTAATTAGG+CGG + tig0016220:409725-409744 Msa1358250:intron 20.0%
!!! ATAAAAATCATTTTAAGGTC+AGG - tig0016220:409889-409908 None:intergenic 20.0%
!!! ATGGTCTTATATTTATTTCT+AGG + tig0016220:410605-410624 Msa1358250:intron 20.0%
!! AAGATTACAAATGAATTCAA+TGG - tig0016220:410798-410817 None:intergenic 20.0%
!! ACAGTAAGTAAATACTTATA+GGG - tig0016220:411565-411584 None:intergenic 20.0%
!! GTGGTTTCAAAATTTAAAAA+GGG - tig0016220:411972-411991 None:intergenic 20.0%
!!! TTACTTCTTTTTAACTAGAT+GGG + tig0016220:412229-412248 Msa1358250:intron 20.0%
!!! AATCATTATAGCATCTTTTT+CGG + tig0016220:412634-412653 Msa1358250:intron 20.0%
!!! AAATCATGATAGCATATTTT+TGG + tig0016220:412740-412759 Msa1358250:intron 20.0%
!!! AATCATGATAGCATATTTTT+GGG + tig0016220:412741-412760 Msa1358250:intron 20.0%
!! AAAATTTCCTCAAATTATAG+GGG - tig0016220:412955-412974 None:intergenic 20.0%
!! CAAAATTTCCTCAAATTATA+GGG - tig0016220:412956-412975 None:intergenic 20.0%
!!! CCTTGTAATTTTAAGATTTT+TGG - tig0016220:413036-413055 None:intergenic 20.0%
!! CCAAAAATCTTAAAATTACA+AGG + tig0016220:413033-413052 Msa1358250:intron 20.0%
!!! TAAACAAAAATTTTACAAGG+TGG + tig0016220:413064-413083 Msa1358250:intron 20.0%
!!! TGCTGATGAAATTTTTTATA+GGG - tig0016220:413254-413273 None:intergenic 20.0%
!!! ATGCTGATGAAATTTTTTAT+AGG - tig0016220:413255-413274 None:intergenic 20.0%
!!! TTGAAGCTTTTTTCTTTATA+GGG - tig0016220:413555-413574 None:intergenic 20.0%
!!! TTGTATCTTGTATGTTTTTA+AGG + tig0016220:414021-414040 Msa1358250:intron 20.0%
!!! CAAAAAAAAAAAAGGTGTAA+TGG - tig0016220:414084-414103 None:intergenic 20.0%
!!! CATTACACCTTTTTTTTTTT+TGG + tig0016220:414082-414101 Msa1358250:intron 20.0%
!! GGATACAACTAAAAAAAAAA+AGG - tig0016220:414290-414309 None:intergenic 20.0%
!! TATGAATTATAGTGATGTAT+GGG + tig0016220:414318-414337 Msa1358250:intron 20.0%
!! TTCAAATTTCAAATGATCAT+CGG - tig0016220:414456-414475 None:intergenic 20.0%
!! CAATTGAAGGATTTATAAAT+GGG - tig0016220:414734-414753 None:intergenic 20.0%
!! ATGTAAAAGAGTAAAACAAT+TGG - tig0016220:415695-415714 None:intergenic 20.0%
!!! TTTGATTTACTCTTAAATCT+TGG + tig0016220:415738-415757 Msa1358250:intron 20.0%
!!! TGTAATATGTTTTAGGATAA+AGG - tig0016220:416120-416139 None:intergenic 20.0%
!!! CAAAATCTGTAATATGTTTT+AGG - tig0016220:416127-416146 None:intergenic 20.0%
!! TGATATATAAGACCATATTT+GGG - tig0016220:416477-416496 None:intergenic 20.0%
!! ATGATATATAAGACCATATT+TGG - tig0016220:416478-416497 None:intergenic 20.0%
!! TGATAAAAAGAAAGAAAAGA+AGG + tig0016220:417119-417138 Msa1358250:CDS 20.0%
!! AAAGAAAGAAAAGAAGAAAA+AGG + tig0016220:417143-417162 Msa1358250:CDS 20.0%
!! AAAAAGAAAAGAAGAAGAAA+AGG + tig0016220:417241-417260 Msa1358250:CDS 20.0%
!!! CTTTTTTCTTTCTTTTTGTT+TGG - tig0016220:417378-417397 None:intergenic 20.0%
!! CAAACAAAAAGAAAGAAAAA+AGG + tig0016220:417376-417395 Msa1358250:CDS 20.0%
!! ATGACAAGTAAAAATAATAC+TGG - tig0016220:417511-417530 None:intergenic 20.0%
!! CATCCTTATGATTTATTTAA+TGG + tig0016220:417556-417575 Msa1358250:three_prime_UTR 20.0%
!! TCCTTATGATTTATTTAATG+GGG + tig0016220:417558-417577 Msa1358250:three_prime_UTR 20.0%
!! TATTTCATCTTTTAGTGGTT+AGG - tig0016220:408116-408135 None:intergenic 25.0%
!! TCAAGTATTTCATCTTTTAG+TGG - tig0016220:408121-408140 None:intergenic 25.0%
! TTTGTTTGTCTATTGTAGTT+TGG - tig0016220:408153-408172 None:intergenic 25.0%
!! TTTTAGATATTTACATGGTG+TGG - tig0016220:408331-408350 None:intergenic 25.0%
! AACAGTGAAATGAAATATTC+GGG - tig0016220:408397-408416 None:intergenic 25.0%
!! ATCGTTTTACTTATTGGAAA+AGG + tig0016220:408751-408770 Msa1358250:intron 25.0%
! TTCATCCAACAATTTGAAAA+GGG - tig0016220:408856-408875 None:intergenic 25.0%
! GAATAACATTAAGGAAAAAC+TGG + tig0016220:409302-409321 Msa1358250:CDS 25.0%
! GCCTAATTAAAAAAAATGTC+AGG - tig0016220:409726-409745 None:intergenic 25.0%
! AGGATAATATTCAATATGCA+AGG + tig0016220:410033-410052 Msa1358250:CDS 25.0%
! GGATAATATTCAATATGCAA+GGG + tig0016220:410034-410053 Msa1358250:CDS 25.0%
!! AGCTTTAGTGTAAAACAAAT+CGG - tig0016220:410143-410162 None:intergenic 25.0%
! ACCTAACATATTTGAAAACA+CGG + tig0016220:410177-410196 Msa1358250:intron 25.0%
! TTTATGATTATCTCAAGAGT+AGG + tig0016220:410437-410456 Msa1358250:CDS 25.0%
! AAATATGCTACTCTCAAATA+TGG + tig0016220:410586-410605 Msa1358250:intron 25.0%
! TTAACTGAATTATGTTGAGT+CGG + tig0016220:410687-410706 Msa1358250:intron 25.0%
!!! TTTTGTTATCCAATTGCAAT+TGG + tig0016220:410928-410947 Msa1358250:intron 25.0%
!! TATCATTTTCCAATTGCAAT+TGG - tig0016220:410940-410959 None:intergenic 25.0%
!!! AATTGGCTAAAAGTTTTTTG+TGG + tig0016220:411067-411086 Msa1358250:intron 25.0%
! AAAATCATGATGACTAAACA+AGG - tig0016220:411144-411163 None:intergenic 25.0%
! GTGTATATACATATTAGTGT+TGG - tig0016220:411207-411226 None:intergenic 25.0%
! AGGAAAATAACAAAACTAAG+CGG + tig0016220:411248-411267 Msa1358250:intron 25.0%
!! ACGTTAAACTCTTTTCATAT+AGG + tig0016220:411512-411531 Msa1358250:intron 25.0%
!! CGTTAAACTCTTTTCATATA+GGG + tig0016220:411513-411532 Msa1358250:intron 25.0%
! GACAGTAAGTAAATACTTAT+AGG - tig0016220:411566-411585 None:intergenic 25.0%
! TATTTACTTACTGTCATATC+CGG + tig0016220:411571-411590 Msa1358250:intron 25.0%
! TTGTACAAGTACTTATAATC+CGG - tig0016220:411593-411612 None:intergenic 25.0%
! GGTGGTTTCAAAATTTAAAA+AGG - tig0016220:411973-411992 None:intergenic 25.0%
! AAAATGAAGTCGAATTTGAT+TGG + tig0016220:412125-412144 Msa1358250:intron 25.0%
! ACCAAAACAAAACAAAAACT+TGG + tig0016220:412188-412207 Msa1358250:intron 25.0%
!!! ACCAAGTTTTTGTTTTGTTT+TGG - tig0016220:412192-412211 None:intergenic 25.0%
! CAAAACAAAAACTTGGTTAA+CGG + tig0016220:412195-412214 Msa1358250:intron 25.0%
!!! GTTACTTCTTTTTAACTAGA+TGG + tig0016220:412228-412247 Msa1358250:intron 25.0%
!!! TACTTCTTTTTAACTAGATG+GGG + tig0016220:412230-412249 Msa1358250:intron 25.0%
! AATAAATTAAACATGGAGTG+AGG + tig0016220:412469-412488 Msa1358250:intron 25.0%
! ATAAATTAAACATGGAGTGA+GGG + tig0016220:412470-412489 Msa1358250:intron 25.0%
!!! AAATCACTTTTTAGACACAT+CGG - tig0016220:412543-412562 None:intergenic 25.0%
!!! TTTTGGTTTTGAACATATCT+TGG + tig0016220:412890-412909 Msa1358250:intron 25.0%
! CCAAAATTTCCTCAAATTAT+AGG - tig0016220:412957-412976 None:intergenic 25.0%
!! CCTATAATTTGAGGAAATTT+TGG + tig0016220:412954-412973 Msa1358250:intron 25.0%
!! TTTTGGATCTTCATGAATTT+TGG - tig0016220:413013-413032 None:intergenic 25.0%
!!! AAAAATTCCGTCAACTTTTT+TGG + tig0016220:413322-413341 Msa1358250:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - tig0016220:413349-413368 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - tig0016220:413350-413369 None:intergenic 25.0%
!!! GTTGAAGCTTTTTTCTTTAT+AGG - tig0016220:413556-413575 None:intergenic 25.0%
!!! TTTTGATGCTTTTGTTTTTC+AGG + tig0016220:413718-413737 Msa1358250:intron 25.0%
!!! TTCCAAAAGTGTTAAAATGT+TGG + tig0016220:413745-413764 Msa1358250:CDS 25.0%
!!! TACCAACATTTTAACACTTT+TGG - tig0016220:413750-413769 None:intergenic 25.0%
!!! TTCAGTTTTTTCAATTGCAA+TGG + tig0016220:413892-413911 Msa1358250:intron 25.0%
!! TTGCATTTTCAGCTTATTTA+AGG + tig0016220:413960-413979 Msa1358250:intron 25.0%
!!! GAACACTGTTTTTTTTTGTA+AGG + tig0016220:414043-414062 Msa1358250:intron 25.0%
! ACTATAATTCATAGATCATG+AGG - tig0016220:414311-414330 None:intergenic 25.0%
! CTATGAATTATAGTGATGTA+TGG + tig0016220:414317-414336 Msa1358250:intron 25.0%
! ATGAATTATAGTGATGTATG+GGG + tig0016220:414319-414338 Msa1358250:intron 25.0%
! GCAATTGAAGGATTTATAAA+TGG - tig0016220:414735-414754 None:intergenic 25.0%
! AAACATCAAAAGTTTCTTAG+GGG - tig0016220:415077-415096 None:intergenic 25.0%
! CAAACATCAAAAGTTTCTTA+GGG - tig0016220:415078-415097 None:intergenic 25.0%
! TCAAACATCAAAAGTTTCTT+AGG - tig0016220:415079-415098 None:intergenic 25.0%
! AAATCGATAAACATTTGCTT+CGG - tig0016220:415364-415383 None:intergenic 25.0%
!!! TTTTTTTTTCTTCTGATGTC+TGG + tig0016220:415382-415401 Msa1358250:intron 25.0%
!!! TGAATGATTTTAGTAAGTTC+TGG - tig0016220:415567-415586 None:intergenic 25.0%
! AGAACTTACTAAAATCATTC+AGG + tig0016220:415566-415585 Msa1358250:CDS 25.0%
! TACCTACATGATTGAAAATA+CGG + tig0016220:415807-415826 Msa1358250:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + tig0016220:415959-415978 Msa1358250:intron 25.0%
! TGTGATGAAAAAAGATCAAA+TGG - tig0016220:416074-416093 None:intergenic 25.0%
! ATATATCATGCATCATTGAT+TGG + tig0016220:416489-416508 Msa1358250:CDS 25.0%
! AAAAATGTGTAAGTGAAGTT+TGG - tig0016220:416685-416704 None:intergenic 25.0%
! ATATGATAAGGATAGAAAGA+AGG + tig0016220:416797-416816 Msa1358250:CDS 25.0%
! TATGATAAGGATAGAAAGAA+GGG + tig0016220:416798-416817 Msa1358250:CDS 25.0%
!! AGGTATATCTTTTGTTCATT+TGG + tig0016220:416847-416866 Msa1358250:intron 25.0%
!!! TTTGTTCATTTGGTATTGAT+TGG + tig0016220:416857-416876 Msa1358250:intron 25.0%
! AAAAAAATCTGATTCTGCAA+TGG + tig0016220:416957-416976 Msa1358250:CDS 25.0%
! TGATAAAAAGAAAGCAAAGA+AGG + tig0016220:417008-417027 Msa1358250:CDS 25.0%
! AAAGAAGGAAAAGAAGAAAA+AGG + tig0016220:417023-417042 Msa1358250:CDS 25.0%
! AAAGAAGAAAAAGGACAAAA+AGG + tig0016220:417032-417051 Msa1358250:CDS 25.0%
! ACAAAAATCTAATACTGCAA+TGG + tig0016220:417068-417087 Msa1358250:CDS 25.0%
! AAAGAAGAAAAAGGAGAAAA+AGG + tig0016220:417152-417171 Msa1358250:CDS 25.0%
! ACCCCATTAAATAAATCATA+AGG - tig0016220:417562-417581 None:intergenic 25.0%
! TATGATTTATTTAATGGGGT+AGG + tig0016220:417562-417581 Msa1358250:three_prime_UTR 25.0%
!! TAGGGTAAATTTTGTCTTTT+TGG + tig0016220:417591-417610 Msa1358250:three_prime_UTR 25.0%
ACAATAGACAAACAAATGAC+TGG + tig0016220:408157-408176 Msa1358250:intron 30.0%
TCTTGATAGGTAGATCTTAT+TGG - tig0016220:408183-408202 None:intergenic 30.0%
! TCTCTGATCGTTTTACTTAT+TGG + tig0016220:408745-408764 Msa1358250:intron 30.0%
!!! ATTTTGATGCTTTGTTTTCC+AGG + tig0016220:408778-408797 Msa1358250:intron 30.0%
! TTTTGCCCTTTTCAAATTGT+TGG + tig0016220:408848-408867 Msa1358250:CDS 30.0%
CTTCATCCAACAATTTGAAA+AGG - tig0016220:408857-408876 None:intergenic 30.0%
AGTAAAGCTTTCTCAATTTC+AGG + tig0016220:408875-408894 Msa1358250:CDS 30.0%
AATTCTTTATACAGGACTCA+TGG + tig0016220:408972-408991 Msa1358250:intron 30.0%
ATTCTTTATACAGGACTCAT+GGG + tig0016220:408973-408992 Msa1358250:intron 30.0%
GACGCATATAAACAGATTAA+GGG - tig0016220:409063-409082 None:intergenic 30.0%
AGACGCATATAAACAGATTA+AGG - tig0016220:409064-409083 None:intergenic 30.0%
CACACAAGTTATGCATAATT+AGG + tig0016220:409122-409141 Msa1358250:intron 30.0%
ACAAGTTATGCATAATTAGG+TGG + tig0016220:409125-409144 Msa1358250:intron 30.0%
ATGTCATCACAAGTTACTAA+GGG - tig0016220:409350-409369 None:intergenic 30.0%
AATGTCATCACAAGTTACTA+AGG - tig0016220:409351-409370 None:intergenic 30.0%
CATCAAATAGCTAACTTTGT+CGG + tig0016220:409383-409402 Msa1358250:intron 30.0%
! TTTTCACAACAATGCTGTTA+TGG + tig0016220:409428-409447 Msa1358250:CDS 30.0%
GCTTCAACTTGTATATTGAT+AGG - tig0016220:409548-409567 None:intergenic 30.0%
GCTTTAGTGTAAAACAAATC+GGG - tig0016220:410142-410161 None:intergenic 30.0%
! ACCGTGTTTTCAAATATGTT+AGG - tig0016220:410181-410200 None:intergenic 30.0%
!! TTTGTATAAAGAAGCATCAC+AGG - tig0016220:410212-410231 None:intergenic 30.0%
CAAAAGCTGAAATATGTTTC+AGG - tig0016220:410284-410303 None:intergenic 30.0%
ATATCTATGGGAACTGAAAT+TGG + tig0016220:410343-410362 Msa1358250:CDS 30.0%
TGAAATTGGTGAACTAGATT+TGG + tig0016220:410357-410376 Msa1358250:CDS 30.0%
GATAGATAACTGTTCCTATA+GGG + tig0016220:410714-410733 Msa1358250:intron 30.0%
CAAAAGAAAAATTCCACACA+TGG - tig0016220:410913-410932 None:intergenic 30.0%
TGATGACTAAACAAGGTAAT+TGG - tig0016220:411137-411156 None:intergenic 30.0%
! ACATATTAGTGTTGGAGTAT+CGG - tig0016220:411199-411218 None:intergenic 30.0%
ATTCAATCGTACAGATGAAA+AGG + tig0016220:411228-411247 Msa1358250:intron 30.0%
GGAAAATAACAAAACTAAGC+GGG + tig0016220:411249-411268 Msa1358250:intron 30.0%
TGAAATTGAATGCCTATTGT+CGG - tig0016220:411540-411559 None:intergenic 30.0%
ACAATAATTGTAGTCACATC+AGG - tig0016220:411774-411793 None:intergenic 30.0%
GATGTATTCTCAACAAATAG+GGG - tig0016220:411800-411819 None:intergenic 30.0%
GGATGTATTCTCAACAAATA+GGG - tig0016220:411801-411820 None:intergenic 30.0%
TGAAGAAGATCTTAACTCAT+CGG + tig0016220:411869-411888 Msa1358250:intron 30.0%
ATCACTGCAAAATCCATTAT+AGG + tig0016220:412017-412036 Msa1358250:intron 30.0%
! TTTAAAGTTTACTTCCACCA+TGG - tig0016220:412084-412103 None:intergenic 30.0%
!!! TTTTGTTTTGGTAAGCTCTT+GGG - tig0016220:412180-412199 None:intergenic 30.0%
TCAATTTGATTCACGACAAA+TGG - tig0016220:412347-412366 None:intergenic 30.0%
GGTTTAATTAGAATGCTGAT+AGG - tig0016220:412601-412620 None:intergenic 30.0%
AAAATAGCCTACATTACATG+GGG - tig0016220:412812-412831 None:intergenic 30.0%
GAAAATAGCCTACATTACAT+GGG - tig0016220:412813-412832 None:intergenic 30.0%
AGAAAATAGCCTACATTACA+TGG - tig0016220:412814-412833 None:intergenic 30.0%
TGATTTACCCCTATAATTTG+AGG + tig0016220:412945-412964 Msa1358250:intron 30.0%
CAAAATCGATGATATGACAA+GGG - tig0016220:412985-413004 None:intergenic 30.0%
ACAAAATCGATGATATGACA+AGG - tig0016220:412986-413005 None:intergenic 30.0%
!!! GTCATATCATCGATTTTGTA+CGG + tig0016220:412987-413006 Msa1358250:intron 30.0%
!!! AATGCTGATTTTTCGTTGTA+GGG - tig0016220:413225-413244 None:intergenic 30.0%
!!! AAATGCTGATTTTTCGTTGT+AGG - tig0016220:413226-413245 None:intergenic 30.0%
!!! GTTGACGGAATTTTTTGATA+GGG - tig0016220:413317-413336 None:intergenic 30.0%
!!! AGTTGACGGAATTTTTTGAT+AGG - tig0016220:413318-413337 None:intergenic 30.0%
! TTCATTGAGCACTTTGAAAA+GGG - tig0016220:413798-413817 None:intergenic 30.0%
! CTGGATAAGGTATCTAAAAA+AGG - tig0016220:414233-414252 None:intergenic 30.0%
AAAAAAAGGGTTGTGTTAAC+CGG - tig0016220:414276-414295 None:intergenic 30.0%
! TCTAGTTTGTAATCTATCAG+AGG + tig0016220:414400-414419 Msa1358250:intron 30.0%
GTTCATATTATAGTGAACTG+TGG + tig0016220:414568-414587 Msa1358250:intron 30.0%
ATTTGCAAACTTCTTTACAC+AGG + tig0016220:414648-414667 Msa1358250:intron 30.0%
ACTTCTTTACACAGGATTTA+TGG + tig0016220:414656-414675 Msa1358250:intron 30.0%
TGATGTTGGCAATATTATGA+TGG + tig0016220:414763-414782 Msa1358250:intron 30.0%
GATGTTGGCAATATTATGAT+GGG + tig0016220:414764-414783 Msa1358250:intron 30.0%
ATGTTGGCAATATTATGATG+GGG + tig0016220:414765-414784 Msa1358250:intron 30.0%
AATTAGGTGGTCAAATTGAA+AGG + tig0016220:414872-414891 Msa1358250:intron 30.0%
CTGATATATTCTCAAACTTC+TGG - tig0016220:414901-414920 None:intergenic 30.0%
GACTATCATTAAGGAAAAAC+TGG + tig0016220:415036-415055 Msa1358250:CDS 30.0%
AACATCAAAAGTTTCTTAGG+GGG - tig0016220:415076-415095 None:intergenic 30.0%
ATGTATTCAACTCTTTATCG+AGG - tig0016220:415506-415525 None:intergenic 30.0%
! GACAAATTGTATTTCTACCT+CGG - tig0016220:415661-415680 None:intergenic 30.0%
ATGTAGGTAAAGAAAGAGTA+CGG - tig0016220:415796-415815 None:intergenic 30.0%
! AACCGTATTTTCAATCATGT+AGG - tig0016220:415812-415831 None:intergenic 30.0%
TTTGTTTAAAGAGGAATCAC+AGG - tig0016220:415842-415861 None:intergenic 30.0%
! TGGTTTTTGATAGAACACAA+TGG - tig0016220:415955-415974 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG - tig0016220:415999-416018 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG + tig0016220:416006-416025 Msa1358250:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + tig0016220:416016-416035 Msa1358250:intron 30.0%
GATGAAAAAAGATCAAATGG+AGG - tig0016220:416071-416090 None:intergenic 30.0%
!! CATATTACAGATTTTGACAG+AGG + tig0016220:416131-416150 Msa1358250:intron 30.0%
!! TGACCAAGTTTTATCTCTTT+CGG + tig0016220:416242-416261 Msa1358250:CDS 30.0%
ATTCCGAAAGAGATAAAACT+TGG - tig0016220:416248-416267 None:intergenic 30.0%
TCTATGATTATCTAAAGAGC+AGG + tig0016220:416280-416299 Msa1358250:CDS 30.0%
AGTTTGGTATAACAACCATA+GGG - tig0016220:416669-416688 None:intergenic 30.0%
AAGTTTGGTATAACAACCAT+AGG - tig0016220:416670-416689 None:intergenic 30.0%
TTATCATATGCCTCTATCTT+GGG - tig0016220:416786-416805 None:intergenic 30.0%
AACAAAAGATATACCTTAGC+AGG - tig0016220:416843-416862 None:intergenic 30.0%
! TTTTTCACAACTTCATGTTC+TGG - tig0016220:417225-417244 None:intergenic 30.0%
AGAAAAGAAGAAGAAAAGGA+AGG + tig0016220:417245-417264 Msa1358250:CDS 30.0%
! GCTAAAGAGGTATACAAAAA+TGG - tig0016220:417476-417495 None:intergenic 30.0%
!! TTCATGCAACTATGTTTTTG+AGG + tig0016220:417621-417640 Msa1358250:three_prime_UTR 30.0%
!! TCATGCAACTATGTTTTTGA+GGG + tig0016220:417622-417641 Msa1358250:three_prime_UTR 30.0%
TGGAGAATATAGATCGACAT+GGG + tig0016220:407980-407999 Msa1358250:intron 35.0%
TAGCTTGACAAACTGTTGTT+TGG - tig0016220:408019-408038 None:intergenic 35.0%
!!! TTTTCTAGGGCAATGATACT+AGG - tig0016220:408067-408086 None:intergenic 35.0%
AGTATCATTGCCCTAGAAAA+TGG + tig0016220:408067-408086 Msa1358250:intron 35.0%
! CATCTTTTAGTGGTTAGGTT+GGG - tig0016220:408111-408130 None:intergenic 35.0%
! TCATCTTTTAGTGGTTAGGT+TGG - tig0016220:408112-408131 None:intergenic 35.0%
TTTGGCTATCATCAATTCGA+TGG - tig0016220:408232-408251 None:intergenic 35.0%
GTTGGGTTTACACTATTTGT+GGG - tig0016220:408627-408646 None:intergenic 35.0%
AGTTGGGTTTACACTATTTG+TGG - tig0016220:408628-408647 None:intergenic 35.0%
CGAAGCTTCTTTCTTTAGTT+GGG - tig0016220:408644-408663 None:intergenic 35.0%
TCGAAGCTTCTTTCTTTAGT+TGG - tig0016220:408645-408664 None:intergenic 35.0%
! GTATTATTTGAAACTCCTGC+AGG + tig0016220:408825-408844 Msa1358250:CDS 35.0%
! AGATTAAGGGAAGTATGAGT+GGG - tig0016220:409050-409069 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + tig0016220:409176-409195 Msa1358250:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+AGG + tig0016220:409213-409232 Msa1358250:CDS 35.0%
GAAACTGGGGAATAACATTA+AGG + tig0016220:409293-409312 Msa1358250:CDS 35.0%
TGATCTAGCTGTTCAAGATA+TGG + tig0016220:409494-409513 Msa1358250:intron 35.0%
CTTGTATATTGATAGGCTAC+AGG - tig0016220:409541-409560 None:intergenic 35.0%
GTCAGGAAAAAGTTGTTATC+CGG - tig0016220:409709-409728 None:intergenic 35.0%
!! GCCTGATACTTTTGATTCTT+CGG + tig0016220:409850-409869 Msa1358250:intron 35.0%
!! TCCGAAGAATCAAAAGTATC+AGG - tig0016220:409854-409873 None:intergenic 35.0%
TGAATGATTTCGCTAAGATC+AGG - tig0016220:410014-410033 None:intergenic 35.0%
TGATCTTAGCGAAATCATTC+AGG + tig0016220:410013-410032 Msa1358250:CDS 35.0%
!! TGACCAGGTTTTATCTCTTT+CGG + tig0016220:410399-410418 Msa1358250:CDS 35.0%
ATTCCGAAAGAGATAAAACC+TGG - tig0016220:410405-410424 None:intergenic 35.0%
TGATTATCTCAAGAGTAGGA+TGG + tig0016220:410441-410460 Msa1358250:CDS 35.0%
TGAATTATGTTGAGTCGGTT+GGG + tig0016220:410692-410711 Msa1358250:intron 35.0%
GGATAGATAACTGTTCCTAT+AGG + tig0016220:410713-410732 Msa1358250:intron 35.0%
ATTCCACACATGGATATTCT+TGG - tig0016220:410903-410922 None:intergenic 35.0%
! TGGACAAGCATGCTTTTAAT+TGG + tig0016220:411050-411069 Msa1358250:intron 35.0%
!!! AAAGTTTTTTGTGGTGCTCT+TGG + tig0016220:411076-411095 Msa1358250:intron 35.0%
!!! AAGTTTTTTGTGGTGCTCTT+GGG + tig0016220:411077-411096 Msa1358250:intron 35.0%
GCTCAGAAATTACACAATGA+TGG - tig0016220:411172-411191 None:intergenic 35.0%
GGGATGTATTCTCAACAAAT+AGG - tig0016220:411802-411821 None:intergenic 35.0%
ATTATTCCATGTTGCCATGT+TGG - tig0016220:411901-411920 None:intergenic 35.0%
CTATAAGCAGTGACCTATAA+TGG - tig0016220:412033-412052 None:intergenic 35.0%
TTTGATTGGACTGTAGAAGA+AGG + tig0016220:412139-412158 Msa1358250:intron 35.0%
!!! GTTTTGTTTTGGTAAGCTCT+TGG - tig0016220:412181-412200 None:intergenic 35.0%
! TGTTTTACCCCATGTAATGT+AGG + tig0016220:412802-412821 Msa1358250:intron 35.0%
ATAGGGACTAAAAATGCTGA+TGG - tig0016220:413237-413256 None:intergenic 35.0%
TTAGGGACCAAAAAAGTTGA+CGG - tig0016220:413332-413351 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + tig0016220:413340-413359 Msa1358250:intron 35.0%
TGCTTAAGGAAAATGTCACA+AGG + tig0016220:413354-413373 Msa1358250:intron 35.0%
! GGGTTTACACTATTTCTCTA+GGG - tig0016220:413535-413554 None:intergenic 35.0%
! AGGGTTTACACTATTTCTCT+AGG - tig0016220:413536-413555 None:intergenic 35.0%
! CTTCATTGAGCACTTTGAAA+AGG - tig0016220:413799-413818 None:intergenic 35.0%
!! CTTTTCAAAGTGCTCAATGA+AGG + tig0016220:413797-413816 Msa1358250:CDS 35.0%
ATGATGTCTGATTCATGACT+TGG + tig0016220:413937-413956 Msa1358250:intron 35.0%
!! TTAAGGGTAATAAAGCACTG+TGG - tig0016220:414358-414377 None:intergenic 35.0%
! ACACTTTCGATTAGAAGTGT+CGG + tig0016220:414537-414556 Msa1358250:intron 35.0%
ATCAGATCATGAAAGAACGT+AGG - tig0016220:414614-414633 None:intergenic 35.0%
CTTTACACAGGATTTATGGA+AGG + tig0016220:414660-414679 Msa1358250:intron 35.0%
ATCAGTAAACACGCAATTGA+AGG - tig0016220:414747-414766 None:intergenic 35.0%
AATTGCGTGTTTACTGATGT+TGG + tig0016220:414749-414768 Msa1358250:intron 35.0%
ACCTAATTATGCATCACTTG+GGG - tig0016220:414860-414879 None:intergenic 35.0%
CACCTAATTATGCATCACTT+GGG - tig0016220:414861-414880 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + tig0016220:409176-409195 Msa1358250:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+GGG + tig0016220:409213-409232 Msa1358250:CDS 35.0%
AGGTATTCGATTTCAGTTGA+CGG + tig0016220:415188-415207 Msa1358250:CDS 35.0%
TCTGGTACATTCTGATTCTT+TGG + tig0016220:415400-415419 Msa1358250:intron 35.0%
!! GTAAAAAGCATCTTAAGGTC+AGG - tig0016220:415439-415458 None:intergenic 35.0%
!! ACCTTAAGATGCTTTTTACC+AGG + tig0016220:415440-415459 Msa1358250:intron 35.0%
!! ACCTGGTAAAAAGCATCTTA+AGG - tig0016220:415444-415463 None:intergenic 35.0%
AGTTGAATACATATGCCATG+AGG + tig0016220:415514-415533 Msa1358250:CDS 35.0%
GTTGAATACATATGCCATGA+GGG + tig0016220:415515-415534 Msa1358250:CDS 35.0%
AGGATAATATCCAATACGCA+AGG + tig0016220:415586-415605 Msa1358250:CDS 35.0%
GAGTAAAACAATTGGCAACA+CGG - tig0016220:415687-415706 None:intergenic 35.0%
! TGTAGGTAAAGAAAGAGTAC+GGG - tig0016220:415795-415814 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - tig0016220:415975-415994 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - tig0016220:415987-416006 None:intergenic 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + tig0016220:415994-416013 Msa1358250:intron 35.0%
!! ATATCTATGGGTACTGAAGT+TGG + tig0016220:416186-416205 Msa1358250:CDS 35.0%
!! TGAAGTTGGTGAACTAGATT+TGG + tig0016220:416200-416219 Msa1358250:CDS 35.0%
ATTTATTAAGCTACCCCCAT+GGG - tig0016220:416370-416389 None:intergenic 35.0%
AAACATGCTACTCCCAAATA+TGG + tig0016220:416462-416481 Msa1358250:CDS 35.0%
! GAAATTTTGCCCTTGAACTT+TGG - tig0016220:416525-416544 None:intergenic 35.0%
AGTTCAAGGGCAAAATTTCT+CGG + tig0016220:416526-416545 Msa1358250:CDS 35.0%
TCAAAGTACAACAAGTACCT+TGG - tig0016220:416637-416656 None:intergenic 35.0%
! CTTTGAGTTATATGTCCCTA+TGG + tig0016220:416651-416670 Msa1358250:intron 35.0%
AATCTCGAAGGCAAAGAATT+AGG + tig0016220:416732-416751 Msa1358250:CDS 35.0%
!! CAAAGAATTAGGTCGATTTG+CGG + tig0016220:416743-416762 Msa1358250:CDS 35.0%
!! AAAGAATTAGGTCGATTTGC+GGG + tig0016220:416744-416763 Msa1358250:CDS 35.0%
CTTATCATATGCCTCTATCT+TGG - tig0016220:416787-416806 None:intergenic 35.0%
! CAAGATAGAGGCATATGATA+AGG + tig0016220:416785-416804 Msa1358250:CDS 35.0%
AAAGGACAAAAAGGAAGAAG+AGG + tig0016220:417041-417060 Msa1358250:CDS 35.0%
! TTCTTTTTATCAGCAGCAGA+AGG - tig0016220:417000-417019 None:intergenic 35.0%
AAAGGAGAAAAAGGAAGAAG+AGG + tig0016220:417161-417180 Msa1358250:CDS 35.0%
CAGGAGAAAAGAAGAAAAAG+AGG + tig0016220:417316-417335 Msa1358250:CDS 35.0%
CAAGGTGTAAATAGAGCAAA+GGG - tig0016220:417661-417680 None:intergenic 35.0%
TTGCTAACTTAAGATCAGCA+AGG - tig0016220:417679-417698 None:intergenic 35.0%
CATGTCGATCTATATTCTCC+AGG - tig0016220:407981-408000 None:intergenic 40.0%
CTGGAGAATATAGATCGACA+TGG + tig0016220:407979-407998 Msa1358250:intron 40.0%
ATGATACTAGGCGTCTTCTT+AGG - tig0016220:408055-408074 None:intergenic 40.0%
! TTCAGATTCGTGGTCTTGAT+AGG - tig0016220:408196-408215 None:intergenic 40.0%
CAATTCGATGGCAATCACAA+CGG - tig0016220:408220-408239 None:intergenic 40.0%
!!! AGGCTTGTTGGTTGAACTTT+TGG - tig0016220:408250-408269 None:intergenic 40.0%
AGATATTTACATGGTGTGGC+AGG - tig0016220:408327-408346 None:intergenic 40.0%
! GGACACTACACGTTTTTGAA+TGG + tig0016220:408434-408453 Msa1358250:intron 40.0%
AAGAAAGAAGCTTCGACTTC+TGG + tig0016220:408649-408668 Msa1358250:intron 40.0%
!!! GCTTTGTTTTCCAGGTTTGT+TGG + tig0016220:408786-408805 Msa1358250:intron 40.0%
!!! TGTCACTTTTCCAACAAACC+TGG - tig0016220:408799-408818 None:intergenic 40.0%
! CAGATTAAGGGAAGTATGAG+TGG - tig0016220:409051-409070 None:intergenic 40.0%
GAAGCTAGGTTCTTGATTGA+TGG + tig0016220:409198-409217 Msa1358250:CDS 40.0%
AACGTCTCATTGTCACAATG+AGG - tig0016220:409258-409277 None:intergenic 40.0%
CATTAAGGAAAAACTGGGAC+CGG + tig0016220:409308-409327 Msa1358250:CDS 40.0%
CAAGTTACTAAGGGACACTT+GGG - tig0016220:409341-409360 None:intergenic 40.0%
ACAAGTTACTAAGGGACACT+TGG - tig0016220:409342-409361 None:intergenic 40.0%
!! CCGGAGAATCAAAAAGTATC+CGG - tig0016220:409690-409709 None:intergenic 40.0%
!! CCGGATACTTTTTGATTCTC+CGG + tig0016220:409687-409706 Msa1358250:intron 40.0%
AAGAGTTGAATACATCTGCC+AGG + tig0016220:409793-409812 Msa1358250:CDS 40.0%
AGTTGAATGCATATGCCATG+AGG + tig0016220:409964-409983 Msa1358250:CDS 40.0%
GTTGAATGCATATGCCATGA+GGG + tig0016220:409965-409984 Msa1358250:CDS 40.0%
! CATATTTCAGCTTTTGCCAG+AGG + tig0016220:410288-410307 Msa1358250:intron 40.0%
AGAAGCAGCTGTGATATCTA+TGG + tig0016220:410330-410349 Msa1358250:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + tig0016220:410331-410350 Msa1358250:CDS 40.0%
TTGGCAGATATTAGAGAGCT+AGG + tig0016220:410376-410395 Msa1358250:CDS 40.0%
CTCTTTCGGAATATAGAGCT+CGG + tig0016220:410413-410432 Msa1358250:CDS 40.0%
!! CTAGGATTGTTTCTGAACCA+AGG + tig0016220:410623-410642 Msa1358250:intron 40.0%
CTGAATTATGTTGAGTCGGT+TGG + tig0016220:410691-410710 Msa1358250:intron 40.0%
TGGTGATTAGACTTTGAGCA+AGG - tig0016220:410883-410902 None:intergenic 40.0%
TCACCAAGAATATCCATGTG+TGG + tig0016220:410897-410916 Msa1358250:intron 40.0%
GGAAAATGATATGTATCCCG+AGG + tig0016220:410949-410968 Msa1358250:intron 40.0%
ATGATATGTATCCCGAGGAA+TGG + tig0016220:410954-410973 Msa1358250:intron 40.0%
TGATATGTATCCCGAGGAAT+GGG + tig0016220:410955-410974 Msa1358250:intron 40.0%
ATTATCGCTATCCCATTCCT+CGG - tig0016220:410969-410988 None:intergenic 40.0%
ATGCTTGTCCACAAATCATG+GGG - tig0016220:411041-411060 None:intergenic 40.0%
CATGCTTGTCCACAAATCAT+GGG - tig0016220:411042-411061 None:intergenic 40.0%
TGTGTGTTGGAAGTTGAAAC+TGG + tig0016220:411283-411302 Msa1358250:intron 40.0%
GTGTGTTGGAAGTTGAAACT+GGG + tig0016220:411284-411303 Msa1358250:intron 40.0%
TGTGTTGGAAGTTGAAACTG+GGG + tig0016220:411285-411304 Msa1358250:intron 40.0%
TTCATATAGGGACCGACAAT+AGG + tig0016220:411525-411544 Msa1358250:intron 40.0%
AACTTTCCAACATGGCAACA+TGG + tig0016220:411892-411911 Msa1358250:intron 40.0%
! GGATTTTGCAGTGATAAGCA+GGG - tig0016220:412012-412031 None:intergenic 40.0%
! TGGATTTTGCAGTGATAAGC+AGG - tig0016220:412013-412032 None:intergenic 40.0%
AAAGTTTACTTCCACCATGG+TGG - tig0016220:412081-412100 None:intergenic 40.0%
TTGTATCCACCGTGAAAACT+TGG + tig0016220:412380-412399 Msa1358250:intron 40.0%
! CACTTCATGCCAAGTTTTCA+CGG - tig0016220:412392-412411 None:intergenic 40.0%
AACTTGGCATGAAGTGTGAA+AGG + tig0016220:412396-412415 Msa1358250:intron 40.0%
!! AGTATTGACCTTGTGGATTG+CGG - tig0016220:413629-413648 None:intergenic 40.0%
!! AGCGAAAAGTATTGACCTTG+TGG - tig0016220:413636-413655 None:intergenic 40.0%
!! AGGAAAGCTTTCTGAAGTTC+AGG + tig0016220:413817-413836 Msa1358250:CDS 40.0%
TCTAAACTTCTCTGCGAACT+TGG + tig0016220:413862-413881 Msa1358250:intron 40.0%
AAAATGTTAACCTGTTCCCC+CGG + tig0016220:414108-414127 Msa1358250:intron 40.0%
! TGTAATCACATGTGTCACTC+TGG + tig0016220:414476-414495 Msa1358250:intron 40.0%
ACCCCAAGTGATGCATAATT+AGG + tig0016220:414856-414875 Msa1358250:intron 40.0%
CCACCTAATTATGCATCACT+TGG - tig0016220:414862-414881 None:intergenic 40.0%
CCAAGTGATGCATAATTAGG+TGG + tig0016220:414859-414878 Msa1358250:intron 40.0%
!! GCAGCTAGTTTGTTGATTGA+TGG + tig0016220:414932-414951 Msa1358250:CDS 40.0%
GATTGATGGAAAAGCTAGCA+AGG + tig0016220:409212-409231 Msa1358250:CDS 40.0%
GAAGTTGGGGACTATCATTA+AGG + tig0016220:415027-415046 Msa1358250:CDS 40.0%
TGTTCACAGCAATGCTGTTA+TGG + tig0016220:415155-415174 Msa1358250:CDS 40.0%
ATAGACTATGAGACAAACCC+AGG - tig0016220:415257-415276 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - tig0016220:416046-416065 None:intergenic 40.0%
AGAAGCAGCTGTGATATCTA+TGG + tig0016220:410330-410349 Msa1358250:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + tig0016220:410331-410350 Msa1358250:CDS 40.0%
CCAACCATAGCAGTCAAATT+GGG - tig0016220:416321-416340 None:intergenic 40.0%
CCAATTTGACTGCTATGGTT+GGG + tig0016220:416319-416338 Msa1358250:CDS 40.0%
CAATTTGACTGCTATGGTTG+GGG + tig0016220:416320-416339 Msa1358250:CDS 40.0%
GATTTATTAAGCTACCCCCA+TGG - tig0016220:416371-416390 None:intergenic 40.0%
ATAAATCTTGCAAAGCAGCC+TGG + tig0016220:416384-416403 Msa1358250:CDS 40.0%
ACTTTGCAAGCTGATGTAGA+TGG + tig0016220:417189-417208 Msa1358250:CDS 40.0%
AGAGACACAGATTTGAATGC+AGG + tig0016220:417297-417316 Msa1358250:CDS 40.0%
! AAGAAAAATGCCGACTAGAG+CGG + tig0016220:417402-417421 Msa1358250:exon 40.0%
TTGGCATCTGCTATTCAATC+TGG + tig0016220:417440-417459 Msa1358250:three_prime_UTR 40.0%
CTGCTATTCAATCTGGTGAA+TGG + tig0016220:417447-417466 Msa1358250:three_prime_UTR 40.0%
GAACAACTACTGAGCTAAAG+AGG - tig0016220:417489-417508 None:intergenic 40.0%
GCAAGGTGTAAATAGAGCAA+AGG - tig0016220:417662-417681 None:intergenic 40.0%
TCACAACGGTTTCAGATTCG+TGG - tig0016220:408206-408225 None:intergenic 45.0%
!! TCTCTCTTGTTTCTACCGTG+CGG + tig0016220:408679-408698 Msa1358250:intron 45.0%
ATATGTTATCGTGTGCCGCA+CGG - tig0016220:408697-408716 None:intergenic 45.0%
TTGAAAAGGGCAAAACCTGC+AGG - tig0016220:408843-408862 None:intergenic 45.0%
CTTTATACAGGACTCATGGG+AGG + tig0016220:408976-408995 Msa1358250:intron 45.0%
TACTGCAGACTCTGCAAGAA+AGG + tig0016220:409006-409025 Msa1358250:CDS 45.0%
CATTGTCACAATGAGGAAGC+AGG - tig0016220:409251-409270 None:intergenic 45.0%
ATGTGTAGCTGATGCGAAAC+TGG + tig0016220:409278-409297 Msa1358250:CDS 45.0%
TGTGTAGCTGATGCGAAACT+GGG + tig0016220:409279-409298 Msa1358250:CDS 45.0%
AGATATGGCTCCGATGAAGT+TGG + tig0016220:409509-409528 Msa1358250:intron 45.0%
GATATGGCTCCGATGAAGTT+GGG + tig0016220:409510-409529 Msa1358250:intron 45.0%
CAGGACAAACCCAACTTCAT+CGG - tig0016220:409522-409541 None:intergenic 45.0%
GTTGAAGCATAGTGCAGACT+AGG + tig0016220:409560-409579 Msa1358250:intron 45.0%
AATTAGGCGGACACCTTGAT+CGG + tig0016220:409738-409757 Msa1358250:intron 45.0%
CGTCGAGTAAACCAATAGTC+TGG - tig0016220:409764-409783 None:intergenic 45.0%
GAATACATCTGCCAGGCTAT+TGG + tig0016220:409800-409819 Msa1358250:CDS 45.0%
CAATACACAGACCAATAGCC+TGG - tig0016220:409814-409833 None:intergenic 45.0%
CGTCAAGTAAACCAATAGCC+TGG - tig0016220:409932-409951 None:intergenic 45.0%
! AGCTTTTGCCAGAGGAAGTT+GGG + tig0016220:410296-410315 Msa1358250:intron 45.0%
TATTAGAGAGCTAGGTGACC+AGG + tig0016220:410384-410403 Msa1358250:CDS 45.0%
ACCATTGCACCCAATTTGAC+TGG + tig0016220:410466-410485 Msa1358250:CDS 45.0%
CCATTGCACCCAATTTGACT+GGG + tig0016220:410467-410486 Msa1358250:CDS 45.0%
CATTGCACCCAATTTGACTG+GGG + tig0016220:410468-410487 Msa1358250:CDS 45.0%
ACAAGCTCCCCAGTCAAATT+GGG - tig0016220:410478-410497 None:intergenic 45.0%
AACAAGCTCCCCAGTCAAAT+TGG - tig0016220:410479-410498 None:intergenic 45.0%
AATTTGACTGGGGAGCTTGT+TGG + tig0016220:410478-410497 Msa1358250:CDS 45.0%
!! GATTGTTTCTGAACCAAGGC+TGG + tig0016220:410627-410646 Msa1358250:CDS 45.0%
CCAGCTAACTAACACCCTAT+AGG - tig0016220:410731-410750 None:intergenic 45.0%
! CCTATAGGGTGTTAGTTAGC+TGG + tig0016220:410728-410747 Msa1358250:intron 45.0%
TTATCGCTATCCCATTCCTC+GGG - tig0016220:410968-410987 None:intergenic 45.0%
!! GGGGGTGATGGATGAAATAT+AGG - tig0016220:411022-411041 None:intergenic 45.0%
TGCTTGTCCACAAATCATGG+GGG - tig0016220:411040-411059 None:intergenic 45.0%
GCATGCTTGTCCACAAATCA+TGG - tig0016220:411043-411062 None:intergenic 45.0%
! GGCACAGAAAGTATGTGTGT+TGG + tig0016220:411270-411289 Msa1358250:intron 45.0%
CTCATCGGAACTTTCCAACA+TGG + tig0016220:411884-411903 Msa1358250:intron 45.0%
GGTGATCACAATATGCTTGG+TGG - tig0016220:411991-412010 None:intergenic 45.0%
CAGGGTGATCACAATATGCT+TGG - tig0016220:411994-412013 None:intergenic 45.0%
! GATAGTGGTGCTTATTGTGG+AGG - tig0016220:412059-412078 None:intergenic 45.0%
! GTGGATAGTGGTGCTTATTG+TGG - tig0016220:412062-412081 None:intergenic 45.0%
ATAAGCACCACTATCCACCA+TGG + tig0016220:412064-412083 Msa1358250:intron 45.0%
! TTCATGCCAAGTTTTCACGG+TGG - tig0016220:412389-412408 None:intergenic 45.0%
AAATGTTAACCTGTTCCCCC+GGG + tig0016220:414109-414128 Msa1358250:intron 45.0%
TGTCGCACAATGACACATGT+CGG + tig0016220:414505-414524 Msa1358250:intron 45.0%
! ATGGAAGGAGTTTTCCAGTG+CGG + tig0016220:414675-414694 Msa1358250:CDS 45.0%
CATTATCACAATGAGCACGC+AGG - tig0016220:414985-415004 None:intergenic 45.0%
AGCTGTAGCTGATACGAAGT+TGG + tig0016220:415012-415031 Msa1358250:CDS 45.0%
GCTGTAGCTGATACGAAGTT+GGG + tig0016220:415013-415032 Msa1358250:CDS 45.0%
CTGTAGCTGATACGAAGTTG+GGG + tig0016220:415014-415033 Msa1358250:CDS 45.0%
CAGTTGACGGAACTCATAAC+TGG + tig0016220:415201-415220 Msa1358250:CDS 45.0%
GTTGAAGTTCAGTGCAGACA+AGG + tig0016220:415287-415306 Msa1358250:CDS 45.0%
ATACCATTCTCGAACCCTCA+TGG - tig0016220:415532-415551 None:intergenic 45.0%
ATGAGGGTTCGAGAATGGTA+TGG + tig0016220:415531-415550 Msa1358250:CDS 45.0%
ACTTGACAGACCTTGCGTAT+TGG - tig0016220:415599-415618 None:intergenic 45.0%
!! GCAAGGTCTGTCAAGTTGAT+GGG + tig0016220:415603-415622 Msa1358250:CDS 45.0%
TGCAAAGCTTGATTTCTCCG+AGG + tig0016220:415641-415660 Msa1358250:CDS 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - tig0016220:416052-416071 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - tig0016220:416062-416081 None:intergenic 45.0%
AGCAGTCAAATTGGGTGCAA+TGG - tig0016220:416313-416332 None:intergenic 45.0%
TGCACCCAATTTGACTGCTA+TGG + tig0016220:416314-416333 Msa1358250:CDS 45.0%
CCCAATTTGACTGCTATGGT+TGG + tig0016220:416318-416337 Msa1358250:CDS 45.0%
CCCAACCATAGCAGTCAAAT+TGG - tig0016220:416322-416341 None:intergenic 45.0%
AGCTGAGAAGGCTCTCTTTA+GGG + tig0016220:416428-416447 Msa1358250:CDS 45.0%
TCAAGCAGCTCCAAAGTTCA+AGG + tig0016220:416512-416531 Msa1358250:CDS 45.0%
CAAGCAGCTCCAAAGTTCAA+GGG + tig0016220:416513-416532 Msa1358250:CDS 45.0%
!! CAAAGACAGCATTGGCTATC+AGG + tig0016220:416559-416578 Msa1358250:CDS 45.0%
AGATGGTGAAGACAACACCA+TGG + tig0016220:416596-416615 Msa1358250:CDS 45.0%
GATGGTGAAGACAACACCAT+GGG + tig0016220:416597-416616 Msa1358250:CDS 45.0%
TGAAGACAACACCATGGGAT+TGG + tig0016220:416602-416621 Msa1358250:CDS 45.0%
GATTTGCGGGTTCTGCTAAA+GGG + tig0016220:416757-416776 Msa1358250:CDS 45.0%
TAAAGGGAAGCCCAAGATAG+AGG + tig0016220:416773-416792 Msa1358250:CDS 45.0%
AAGGATAGAAAGAAGGGAGC+TGG + tig0016220:416804-416823 Msa1358250:CDS 45.0%
AGGACTGATAACTCCTGCTA+AGG + tig0016220:416827-416846 Msa1358250:CDS 45.0%
GGAACCTACTGAGAATACTG+AGG + tig0016220:417266-417285 Msa1358250:CDS 45.0%
ACCTACTGAGAATACTGAGG+TGG + tig0016220:417269-417288 Msa1358250:CDS 45.0%
TCCACCTCAGTATTCTCAGT+AGG - tig0016220:417273-417292 None:intergenic 45.0%
ATGTTCCATTCCGCTCTAGT+CGG - tig0016220:417415-417434 None:intergenic 45.0%
TTAATGGGGTAGGTCGTCTT+AGG + tig0016220:417572-417591 Msa1358250:three_prime_UTR 45.0%
TAATGGGGTAGGTCGTCTTA+GGG + tig0016220:417573-417592 Msa1358250:three_prime_UTR 45.0%
!!! AATTTTTTTAAAATTTTTGT+AGG - tig0016220:408499-408518 None:intergenic 5.0%
!!! ATAAGTTTATTTATTTTTTA+AGG - tig0016220:408570-408589 None:intergenic 5.0%
!!! ATTTTTTCTTTTTTTAATTT+AGG + tig0016220:412517-412536 Msa1358250:intron 5.0%
TACCTCTCTTGAGCAGCTAC+CGG - tig0016220:407955-407974 None:intergenic 50.0%
TGCTCAAGAGAGGTAGTTCC+TGG + tig0016220:407960-407979 Msa1358250:intron 50.0%
!! GCAGTGGAGGCCATTTTCTA+GGG - tig0016220:408080-408099 None:intergenic 50.0%
!! GTGGTTAGGTTGGGAGTTTC+TGG - tig0016220:408102-408121 None:intergenic 50.0%
AGTGTGGAGAGAAGGCTTGT+TGG - tig0016220:408262-408281 None:intergenic 50.0%
GCCTTCTCTCCACACTAACA+AGG + tig0016220:408266-408285 Msa1358250:intron 50.0%
! GCCTTGTTAGTGTGGAGAGA+AGG - tig0016220:408270-408289 None:intergenic 50.0%
! AGGTGTGAGATCTAAGGTGG+AGG - tig0016220:408296-408315 None:intergenic 50.0%
TACATGGTGTGGCAGGATCT+CGG - tig0016220:408320-408339 None:intergenic 50.0%
CAGAAGCTACAGAGGAAGCT+AGG + tig0016220:409184-409203 Msa1358250:CDS 50.0%
GTGTAGCTGATGCGAAACTG+GGG + tig0016220:409280-409299 Msa1358250:CDS 50.0%
GCTGTTATGGAGCTAATGCG+AGG + tig0016220:409441-409460 Msa1358250:CDS 50.0%
ACCTTGATCGGCCAGACTAT+TGG + tig0016220:409750-409769 Msa1358250:CDS 50.0%
ACCAATAGTCTGGCCGATCA+AGG - tig0016220:409754-409773 None:intergenic 50.0%
GCCATGAGGGTTCGAGAATA+TGG + tig0016220:409978-409997 Msa1358250:CDS 50.0%
GCCATATTCTCGAACCCTCA+TGG - tig0016220:409982-410001 None:intergenic 50.0%
TGAGGGTTCGAGAATATGGC+TGG + tig0016220:409982-410001 Msa1358250:CDS 50.0%
TGCAGAGCTCGATTTCTCTG+AGG + tig0016220:410088-410107 Msa1358250:CDS 50.0%
! CAGCTTTTGCCAGAGGAAGT+TGG + tig0016220:410295-410314 Msa1358250:intron 50.0%
! GCTTTTGCCAGAGGAAGTTG+GGG + tig0016220:410297-410316 Msa1358250:intron 50.0%
CCCAGTCAAATTGGGTGCAA+TGG - tig0016220:410470-410489 None:intergenic 50.0%
GCTGGAGATGTGTGGTACAA+TGG + tig0016220:410645-410664 Msa1358250:CDS 50.0%
TCCATCACCCCCATGATTTG+TGG + tig0016220:411030-411049 Msa1358250:intron 50.0%
TCCACAAATCATGGGGGTGA+TGG - tig0016220:411034-411053 None:intergenic 50.0%
AGTGGTGCTTATTGTGGAGG+AGG - tig0016220:412056-412075 None:intergenic 50.0%
!! ACTTCCACCATGGTGGATAG+TGG - tig0016220:412074-412093 None:intergenic 50.0%
GGTAAGCTCTTGGGTAAGTC+TGG - tig0016220:412171-412190 None:intergenic 50.0%
! GGTACTGTTTGAAACCCCTG+CGG + tig0016220:413766-413785 Msa1358250:CDS 50.0%
! GTACTGTTTGAAACCCCTGC+GGG + tig0016220:413767-413786 Msa1358250:CDS 50.0%
AATGTTAACCTGTTCCCCCG+GGG + tig0016220:414110-414129 Msa1358250:intron 50.0%
! CACATGTGTCACTCTGGTGT+TGG + tig0016220:414482-414501 Msa1358250:intron 50.0%
AATGACACATGTCGGACGCT+GGG + tig0016220:414513-414532 Msa1358250:intron 50.0%
GCTGTTATGGAGCTAATGCG+AGG + tig0016220:409441-409460 Msa1358250:CDS 50.0%
TGAGACAAACCCAGGCTCAT+CGG - tig0016220:415249-415268 None:intergenic 50.0%
ACCATGATCGTCCAGGCTAT+TGG + tig0016220:415468-415487 Msa1358250:CDS 50.0%
ACCAATAGCCTGGACGATCA+TGG - tig0016220:415472-415491 None:intergenic 50.0%
CGTCGAGTAAACCAATAGCC+TGG - tig0016220:415482-415501 None:intergenic 50.0%
ATGCCATGAGGGTTCGAGAA+TGG + tig0016220:409976-409995 Msa1358250:CDS 50.0%
!! CGCAAGGTCTGTCAAGTTGA+TGG + tig0016220:415602-415621 Msa1358250:CDS 50.0%
! GAAAGAGTACGGGCTTTGTG+TGG - tig0016220:415785-415804 None:intergenic 50.0%
! CAAGCCTTATCCCACCAAGT+GGG + tig0016220:415905-415924 Msa1358250:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + tig0016220:415906-415925 Msa1358250:intron 50.0%
AGAATCTGCACGGTACTACC+AGG - tig0016220:416405-416424 None:intergenic 50.0%
GGTAGTACCGTGCAGATTCT+TGG + tig0016220:416405-416424 Msa1358250:CDS 50.0%
CTCAGCTCCAAGAATCTGCA+CGG - tig0016220:416415-416434 None:intergenic 50.0%
GCAGATTCTTGGAGCTGAGA+AGG + tig0016220:416416-416435 Msa1358250:CDS 50.0%
GAGCTGAGAAGGCTCTCTTT+AGG + tig0016220:416427-416446 Msa1358250:CDS 50.0%
! GCTTGCTGCAAAGACAGCAT+TGG + tig0016220:416551-416570 Msa1358250:CDS 50.0%
GCTATCAGGTGTGATGCACT+TGG + tig0016220:416573-416592 Msa1358250:CDS 50.0%
AGGTGTGATGCACTTGGAGA+TGG + tig0016220:416579-416598 Msa1358250:CDS 50.0%
CGATTTGCGGGTTCTGCTAA+AGG + tig0016220:416756-416775 Msa1358250:CDS 50.0%
GATAGAAAGAAGGGAGCTGG+AGG + tig0016220:416807-416826 Msa1358250:CDS 50.0%
AGCTGATGTAGATGGTGACC+AGG + tig0016220:417197-417216 Msa1358250:CDS 50.0%
!! CAACTTCATGTTCTGGCTCC+TGG - tig0016220:417218-417237 None:intergenic 50.0%
GGCATATCAGCAGCATCTTC+AGG - tig0016220:417357-417376 None:intergenic 50.0%
! AAATGCCGACTAGAGCGGAA+TGG + tig0016220:417407-417426 Msa1358250:exon 50.0%
GCGGAATGGAACATGCAGAT+TGG + tig0016220:417421-417440 Msa1358250:three_prime_UTR 50.0%
TCTCTTGAGCAGCTACCGGA+GGG - tig0016220:407951-407970 None:intergenic 55.0%
!! GGCAGTGGAGGCCATTTTCT+AGG - tig0016220:408081-408100 None:intergenic 55.0%
!! TTGGGAGTTTCTGGCAGTGG+AGG - tig0016220:408093-408112 None:intergenic 55.0%
!! AGGTTGGGAGTTTCTGGCAG+TGG - tig0016220:408096-408115 None:intergenic 55.0%
!! GGAGGCAAGCCTTGTTAGTG+TGG - tig0016220:408278-408297 None:intergenic 55.0%
GGCAGGTGTGAGATCTAAGG+TGG - tig0016220:408299-408318 None:intergenic 55.0%
CTCGGCAGGTGTGAGATCTA+AGG - tig0016220:408302-408321 None:intergenic 55.0%
ACCTTGCTCGTCCAGGCTAT+TGG + tig0016220:409918-409937 Msa1358250:CDS 55.0%
ACCAATAGCCTGGACGAGCA+AGG - tig0016220:409922-409941 None:intergenic 55.0%
TGCAAGGGCAGTCAAGCTGA+TGG + tig0016220:410049-410068 Msa1358250:CDS 55.0%
AGTCAAGTTCGTGAGCAGCG+AGG - tig0016220:410510-410529 None:intergenic 55.0%
GAACCAAGGCTGGAGATGTG+TGG + tig0016220:410637-410656 Msa1358250:CDS 55.0%
GTACCACACATCTCCAGCCT+TGG - tig0016220:410643-410662 None:intergenic 55.0%
AGCACCACTATCCACCATGG+TGG + tig0016220:412067-412086 Msa1358250:intron 55.0%
TGAAAAGGGCGAAACCCGCA+GGG - tig0016220:413784-413803 None:intergenic 55.0%
TTGAAAAGGGCGAAACCCGC+AGG - tig0016220:413785-413804 None:intergenic 55.0%
TGCTTCCTTAACCAGTGCCC+CGG - tig0016220:414130-414149 None:intergenic 55.0%
CAATGACACATGTCGGACGC+TGG + tig0016220:414512-414531 Msa1358250:intron 55.0%
CTTTCTTGCAGCATCCGCAC+TGG - tig0016220:414692-414711 None:intergenic 55.0%
CAGTGCGGATGCTGCAAGAA+AGG + tig0016220:414690-414709 Msa1358250:CDS 55.0%
TGGCCTCGCTGTTCAAGACA+TGG + tig0016220:415221-415240 Msa1358250:CDS 55.0%
GAGCCATGTCTTGAACAGCG+AGG - tig0016220:415227-415246 None:intergenic 55.0%
! GGACGATCATGGTGTCAACC+TGG - tig0016220:415461-415480 None:intergenic 55.0%
GGTTGACACCATGATCGTCC+AGG + tig0016220:415461-415480 Msa1358250:intron 55.0%
GGGTTCGAGAATGGTATGGC+TGG + tig0016220:415535-415554 Msa1358250:CDS 55.0%
CTTGGTGGGATAAGGCTTGG+TGG - tig0016220:415904-415923 None:intergenic 55.0%
! CCACTTGGTGGGATAAGGCT+TGG - tig0016220:415907-415926 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG + tig0016220:415904-415923 Msa1358250:intron 55.0%
CTTATCCCACCAAGTGGGGT+CGG + tig0016220:415910-415929 Msa1358250:intron 55.0%
GCTATGGTTGGGGAGCTTGT+TGG + tig0016220:416330-416349 Msa1358250:CDS 55.0%
GGCTCTGTTCTCCAATCCCA+TGG - tig0016220:416616-416635 None:intergenic 55.0%
GGGATTGGAGAACAGAGCCA+AGG + tig0016220:416617-416636 Msa1358250:CDS 55.0%
TGCAGCTTGAAGCGCGATTG+AGG + tig0016220:416709-416728 Msa1358250:intron 55.0%
GCGCGATTGAGGAATCTCGA+AGG + tig0016220:416720-416739 Msa1358250:CDS 55.0%
AGCAGCATCTTCAGGCTCTG+AGG - tig0016220:417349-417368 None:intergenic 55.0%
CTCTTGAGCAGCTACCGGAG+GGG - tig0016220:407950-407969 None:intergenic 60.0%
CTCTCTTGAGCAGCTACCGG+AGG - tig0016220:407952-407971 None:intergenic 60.0%
CTCCGGTAGCTGCTCAAGAG+AGG + tig0016220:407950-407969 Msa1358250:CDS 60.0%
AACGCTGCCCCAACTTCCTC+TGG - tig0016220:410307-410326 None:intergenic 60.0%
GATTGCGGTGTGCAGCAGAG+CGG - tig0016220:413614-413633 None:intergenic 60.0%
GCTGCACACCGCAATCCACA+AGG + tig0016220:413618-413637 Msa1358250:CDS 60.0%
GAAAAGGGCGAAACCCGCAG+GGG - tig0016220:413783-413802 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - tig0016220:414127-414146 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - tig0016220:414128-414147 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - tig0016220:414129-414148 None:intergenic 60.0%
TTGTGTTAACCGGTGCCCCC+GGG - tig0016220:414266-414285 None:intergenic 60.0%
GTTGTGTTAACCGGTGCCCC+CGG - tig0016220:414267-414286 None:intergenic 60.0%
AGACATGGCTCCGATGAGCC+TGG + tig0016220:415236-415255 Msa1358250:CDS 60.0%
GACATGGCTCCGATGAGCCT+GGG + tig0016220:415237-415256 Msa1358250:CDS 60.0%
! CGACCCCACTTGGTGGGATA+AGG - tig0016220:415912-415931 None:intergenic 60.0%
TGTAGCCGACCCCACTTGGT+GGG - tig0016220:415918-415937 None:intergenic 60.0%
ATGTAGCCGACCCCACTTGG+TGG - tig0016220:415919-415938 None:intergenic 60.0%
ACCAAGTGGGGTCGGCTACA+TGG + tig0016220:415918-415937 Msa1358250:intron 60.0%
TCCATGTAGCCGACCCCACT+TGG - tig0016220:415922-415941 None:intergenic 60.0%
GTGCTCGCCTCATTGCCCAT+GGG + tig0016220:416352-416371 Msa1358250:CDS 60.0%
TGCTCGCCTCATTGCCCATG+GGG + tig0016220:416353-416372 Msa1358250:CDS 60.0%
AGCTACCCCCATGGGCAATG+AGG - tig0016220:416362-416381 None:intergenic 60.0%
TGAGCAGCTACCGGAGGGGA+TGG - tig0016220:407946-407965 None:intergenic 65.0%
TGGTGTGGCAGGATCTCGGC+AGG - tig0016220:408316-408335 None:intergenic 65.0%
GGGACACTTGGGCAGCACAC+CGG - tig0016220:409330-409349 None:intergenic 65.0%
GGTGGACACCTTGCTCGTCC+AGG + tig0016220:409911-409930 Msa1358250:intron 65.0%
!! TTCCCCCGGGGCACTGGTTA+AGG + tig0016220:414122-414141 Msa1358250:intron 65.0%
TTATCCAGTGCCCCGTGCCC+CGG + tig0016220:414245-414264 Msa1358250:intron 65.0%
TGTGTTAACCGGTGCCCCCG+GGG - tig0016220:414265-414284 None:intergenic 65.0%
GGTGCTCGCCTCATTGCCCA+TGG + tig0016220:416351-416370 Msa1358250:CDS 65.0%
GCTCGCCTCATTGCCCATGG+GGG + tig0016220:416354-416373 Msa1358250:CDS 65.0%
AACCTGTTCCCCCGGGGCAC+TGG + tig0016220:414116-414135 Msa1358250:intron 70.0%
AACCAGTGCCCCGGGGGAAC+AGG - tig0016220:414121-414140 None:intergenic 70.0%
!! GGGGCACGGGGCACTGGATA+AGG - tig0016220:414246-414265 None:intergenic 70.0%
TATCCAGTGCCCCGTGCCCC+GGG + tig0016220:414246-414265 Msa1358250:intron 70.0%
ATCCAGTGCCCCGTGCCCCG+GGG + tig0016220:414247-414266 Msa1358250:intron 75.0%
TAACCGGTGCCCCCGGGGCA+CGG - tig0016220:414260-414279 None:intergenic 75.0%
! TCCAGTGCCCCGTGCCCCGG+GGG + tig0016220:414248-414267 Msa1358250:intron 80.0%
! AACCGGTGCCCCCGGGGCAC+GGG - tig0016220:414259-414278 None:intergenic 80.0%
! ACCGGTGCCCCCGGGGCACG+GGG - tig0016220:414258-414277 None:intergenic 85.0%
! GCCCCCGGGGCACGGGGCAC+TGG - tig0016220:414252-414271 None:intergenic 90.0%
!! GCCCCGTGCCCCGGGGGCAC+CGG + tig0016220:414254-414273 Msa1358250:intron 90.0%
Chromosome Type Strat End Strand Name
tig0016220 gene 407934 417780 407934 ID=Msa1358250;Name=Msa1358250
tig0016220 mRNA 407934 417780 407934 ID=Msa1358250-mRNA-1;Parent=Msa1358250;Name=Msa1358250-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.47|0.44|0.88|0.88|0.88|18|361|971
tig0016220 exon 407934 407971 407934 ID=Msa1358250-mRNA-1:exon:10715;Parent=Msa1358250-mRNA-1
tig0016220 exon 408800 408896 408800 ID=Msa1358250-mRNA-1:exon:10716;Parent=Msa1358250-mRNA-1
tig0016220 exon 408986 409027 408986 ID=Msa1358250-mRNA-1:exon:10717;Parent=Msa1358250-mRNA-1
tig0016220 exon 409144 409329 409144 ID=Msa1358250-mRNA-1:exon:10718;Parent=Msa1358250-mRNA-1
tig0016220 exon 409417 409503 409417 ID=Msa1358250-mRNA-1:exon:10719;Parent=Msa1358250-mRNA-1
tig0016220 exon 409744 409821 409744 ID=Msa1358250-mRNA-1:exon:10720;Parent=Msa1358250-mRNA-1
tig0016220 exon 409912 410109 409912 ID=Msa1358250-mRNA-1:exon:10721;Parent=Msa1358250-mRNA-1
tig0016220 exon 410298 410530 410298 ID=Msa1358250-mRNA-1:exon:10722;Parent=Msa1358250-mRNA-1
tig0016220 exon 410627 410666 410627 ID=Msa1358250-mRNA-1:exon:10723;Parent=Msa1358250-mRNA-1
tig0016220 exon 413538 413639 413538 ID=Msa1358250-mRNA-1:exon:10724;Parent=Msa1358250-mRNA-1
tig0016220 exon 413740 413838 413740 ID=Msa1358250-mRNA-1:exon:10725;Parent=Msa1358250-mRNA-1
tig0016220 exon 414670 414711 414670 ID=Msa1358250-mRNA-1:exon:10726;Parent=Msa1358250-mRNA-1
tig0016220 exon 414878 415057 414878 ID=Msa1358250-mRNA-1:exon:10727;Parent=Msa1358250-mRNA-1
tig0016220 exon 415144 415308 415144 ID=Msa1358250-mRNA-1:exon:10728;Parent=Msa1358250-mRNA-1
tig0016220 exon 415462 415662 415462 ID=Msa1358250-mRNA-1:exon:10729;Parent=Msa1358250-mRNA-1
tig0016220 exon 416141 416638 416141 ID=Msa1358250-mRNA-1:exon:10730;Parent=Msa1358250-mRNA-1
tig0016220 exon 416714 416848 416714 ID=Msa1358250-mRNA-1:exon:10731;Parent=Msa1358250-mRNA-1
tig0016220 exon 416925 417780 416925 ID=Msa1358250-mRNA-1:exon:10732;Parent=Msa1358250-mRNA-1
tig0016220 CDS 407934 407971 407934 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 408800 408896 408800 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 408986 409027 408986 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 409144 409329 409144 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 409417 409503 409417 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 409744 409821 409744 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 409912 410109 409912 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 410298 410530 410298 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 410627 410666 410627 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 413538 413639 413538 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 413740 413838 413740 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 414670 414711 414670 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 414878 415057 414878 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 415144 415308 415144 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 415462 415662 415462 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 416141 416638 416141 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 416714 416848 416714 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 CDS 416925 417419 416925 ID=Msa1358250-mRNA-1:cds;Parent=Msa1358250-mRNA-1
tig0016220 three_prime_UTR 417420 417780 417420 ID=Msa1358250-mRNA-1:three_prime_utr;Parent=Msa1358250-mRNA-1
Gene Sequence

>Msa1358250

ATGAGAACTCCATCCCCTCCGGTAGCTGCTCAAGAGAGGTTTGTTGGAAAAGTGACAATGCTTGTATTATTTGAAACTCCTGCAGGTTTTGCCCTTTTCAAATTGTTGGATGAAGTAAAGCTTTCTCAATTTCAGGACTCATGGGAGGACTTTTCTACTGCAGACTCTGCAAGAAAGGTGGTCAAATTGATAGCTTTCTCTAAGTTTGAGAATATATCAGAAGCTACAGAGGAAGCTAGGTTCTTGATTGATGGAAAAGCTAGCAAAGGTCTGCGCAAGTTCCTGCTTCCTCATTGTGACAATGAGACGTTATGTGTAGCTGATGCGAAACTGGGGAATAACATTAAGGAAAAACTGGGACCGAAAATCAAATGTTTTCACAACAATGCTGTTATGGAGCTAATGCGAGGTATTCGATATCAGTTGAGAGAACTTGTAACTGATCTAGCTGCGGACACCTTGATCGGCCAGACTATTGGTTTACTCGACGATCTTGATGAAGAGTTGAATACATCTGCCAGGCTATTGGTGGACACCTTGCTCGTCCAGGCTATTGGTTTACTTGACGATTTTGATAAAGAGTTGAATGCATATGCCATGAGGGTTCGAGAATATGGCTGGCATTTTCCTGATCTTAGCGAAATCATTCAGGATAATATTCAATATGCAAGGGCAGTCAAGCTGATGGTTGATCAAATAAACGCTGCAGAGCTCGATTTCTCTGAGCTTTTGCCAGAGGAAGTTGGGGCAGCGTTGCAAGAAGCAGCTGTGATATCTATGGGAACTGAAATTGGTGAACTAGATTTGGCAGATATTAGAGAGCTAGGTGACCAGGTTTTATCTCTTTCGGAATATAGAGCTCGGCTTTATGATTATCTCAAGAGTAGGATGGACACCATTGCACCCAATTTGACTGGGGAGCTTGTTGGTGCTCGCCTCGCTGCTCACGAACTTGACTTGATTGTTTCTGAACCAAGGCTGGAGATGTGTGGTACAATGAGAAATAGTGTAAACCCTATAAAGAAAAAAGCTTCAACTTCTGCTGCTGCTCGTCTCTCTCGTTTCATCTTCTCCGCTCTGCTGCACACCGCAATCCACAAGGTTTGTTCCAAAAGTGTTAAAATGTTGGTACTGTTTGAAACCCCTGCGGGTTTCGCCCTTTTCAAAGTGCTCAATGAAGGAAAGCTTTCTGAAGTTCAGGATTTATGGAAGGAGTTTTCCAGTGCGGATGCTGCAAGAAAGGTGGTCAAATTGAAAGGCTTCCAGAAGTTTGAGAATATATCAGAAGCTACAGAGGCAGCTAGTTTGTTGATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTGCGTGCTCATTGTGATAATGAGACGTTAGCTGTAGCTGATACGAAGTTGGGGACTATCATTAAGGAAAAACTGAAAATCGACTGTGTTCACAGCAATGCTGTTATGGAGCTAATGCGAGGTATTCGATTTCAGTTGACGGAACTCATAACTGGCCTCGCTGTTCAAGACATGGCTCCGATGAGCCTGGGTTTGTCTCATAGTCTATCAAGATACAAGTTGAAGTTCAGTGCAGACAAGGTTGACACCATGATCGTCCAGGCTATTGGTTTACTCGACGACCTCGATAAAGAGTTGAATACATATGCCATGAGGGTTCGAGAATGGTATGGCTGGCATTTTCCAGAACTTACTAAAATCATTCAGGATAATATCCAATACGCAAGGTCTGTCAAGTTGATGGGTGATCGCATTAATGCTGCAAAGCTTGATTTCTCCGAGATTTTGACAGAGGAAGTTGAAGCAGAGTTGAAAGAAGCAGCTGTGATATCTATGGGTACTGAAGTTGGTGAACTAGATTTGGCAAATATTAGAGAGCTATGTGACCAAGTTTTATCTCTTTCGGAATACAGAGCTCAGCTCTATGATTATCTAAAGAGCAGGATGAACACCATTGCACCCAATTTGACTGCTATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGGGGTAGCTTAATAAATCTTGCAAAGCAGCCTGGTAGTACCGTGCAGATTCTTGGAGCTGAGAAGGCTCTCTTTAGGGCATTGAAGACTAAACATGCTACTCCCAAATATGGTCTTATATATCATGCATCATTGATTGGTCAAGCAGCTCCAAAGTTCAAGGGCAAAATTTCTCGGTCGCTTGCTGCAAAGACAGCATTGGCTATCAGGTGTGATGCACTTGGAGATGGTGAAGACAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAAGCGCGATTGAGGAATCTCGAAGGCAAAGAATTAGGTCGATTTGCGGGTTCTGCTAAAGGGAAGCCCAAGATAGAGGCATATGATAAGGATAGAAAGAAGGGAGCTGGAGGACTGATAACTCCTGCTAAGACATATAATACTGCAGCCGATTCAATTATCGAAAAAAAATCTGATTCTGCAATGGATGAAGATACAGAAGAGCTTTCTGCTGCTGATAAAAAGAAAGCAAAGAAGGAAAAGAAGAAAAAGGACAAAAAGGAAGAAGAGGATACACAAAAATCTAATACTGCAATGGATGAAGATACACAAAAGCCTTCTGCTGCTGATAAAAAGAAAGAAAAGAAGGAAAAGAAAGAAAAGAAGAAAAAGGAGAAAAAGGAAGAAGAGGATACAACTTTGCAAGCTGATGTAGATGGTGACCAGGAGCCAGAACATGAAGTTGTGAAAAAAGAAAAGAAGAAGAAAAGGAAGGAACCTACTGAGAATACTGAGGTGGAGAATAGAGACACAGATTTGAATGCAGGAGAAAAGAAGAAAAAGAGGAAAAAATCCTCAGAGCCTGAAGATGCTGCTGATATGCCAAACAAAAAGAAAGAAAAAAGGAAGAAGAAAAATGCCGACTAG
Protein sequence

>Msa1358250

MRTPSPPVAAQERFVGKVTMLVLFETPAGFALFKLLDEVKLSQFQDSWEDFSTADSARKVVKLIAFSKFENISEATEEARFLIDGKASKGLRKFLLPHCDNETLCVADAKLGNNIKEKLGPKIKCFHNNAVMELMRGIRYQLRELVTDLAADTLIGQTIGLLDDLDEELNTSARLLVDTLLVQAIGLLDDFDKELNAYAMRVREYGWHFPDLSEIIQDNIQYARAVKLMVDQINAAELDFSELLPEEVGAALQEAAVISMGTEIGELDLADIRELGDQVLSLSEYRARLYDYLKSRMDTIAPNLTGELVGARLAAHELDLIVSEPRLEMCGTMRNSVNPIKKKASTSAAARLSRFIFSALLHTAIHKVCSKSVKMLVLFETPAGFALFKVLNEGKLSEVQDLWKEFSSADAARKVVKLKGFQKFENISEATEAASLLIDGKASKGLRKFLRAHCDNETLAVADTKLGTIIKEKLKIDCVHSNAVMELMRGIRFQLTELITGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARSVKLMGDRINAAKLDFSEILTEEVEAELKEAAVISMGTEVGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGEDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNTAADSIIEKKSDSAMDEDTEELSAADKKKAKKEKKKKDKKEEEDTQKSNTAMDEDTQKPSAADKKKEKKEKKEKKKKEKKEEEDTTLQADVDGDQEPEHEVVKKEKKKKRKEPTENTEVENRDTDLNAGEKKKKRKKSSEPEDAADMPNKKKEKRKKKNAD*