AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0689260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689260 MtrunA17_Chr5g0397481 96.985 597 11 2 375 971 1 590 0.0 1159
Msa0689260 MtrunA17_Chr5g0397481 73.941 307 72 5 20 321 1 304 3.22e-141 434
Msa0689260 MtrunA17_Chr4g0035431 90.476 462 44 0 375 836 1 462 0.0 847
Msa0689260 MtrunA17_Chr4g0035431 70.033 307 84 5 20 321 1 304 1.19e-127 397
Msa0689260 MtrunA17_Chr4g0057761 43.137 408 215 5 375 767 3 408 2.45e-97 316
Msa0689260 MtrunA17_Chr4g0057761 36.137 321 176 11 18 316 1 314 1.58e-41 160
Msa0689260 MtrunA17_Chr5g0397491 77.273 154 33 1 384 535 6 159 2.58e-72 236
Msa0689260 MtrunA17_Chr5g0397491 84.962 133 20 0 29 161 6 138 5.51e-71 232
Msa0689260 MtrunA17_Chr7g0228641 31.839 223 151 1 533 754 95 317 1.35e-28 120
Msa0689260 MtrunA17_Chr1g0195941 70.732 41 12 0 368 408 54 94 7.38e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689260 AT5G27120.1 81.757 444 81 0 375 818 1 444 0.0 762
Msa0689260 AT5G27120.1 63.787 301 103 3 20 316 1 299 3.21e-117 370
Msa0689260 AT3G05060.1 80.537 447 87 0 375 821 2 448 0.0 758
Msa0689260 AT3G05060.1 62.458 301 107 3 20 316 2 300 5.25e-114 361
Msa0689260 AT5G27140.2 63.380 426 120 3 375 799 1 391 5.96e-176 519
Msa0689260 AT5G27140.2 46.729 321 122 6 20 335 1 277 1.09e-71 245
Msa0689260 AT5G27140.1 58.163 490 141 6 375 859 1 431 1.13e-174 516
Msa0689260 AT5G27140.1 46.584 322 119 8 20 335 1 275 2.39e-71 244
Msa0689260 AT1G56110.1 44.390 410 207 6 375 767 3 408 2.09e-106 341
Msa0689260 AT1G56110.1 36.223 323 173 13 18 316 1 314 1.37e-46 176
Msa0689260 AT3G12860.1 43.204 412 213 6 373 767 1 408 4.43e-103 331
Msa0689260 AT3G12860.1 34.796 319 179 11 20 316 3 314 2.88e-44 168
Msa0689260 AT1G60170.1 28.972 214 152 0 533 746 95 308 2.14e-21 99.4

Find 214 sgRNAs with CRISPR-Local

Find 644 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCTTATGATTTATTTAA+TGG 0.111511 4_4:+56266658 Msa0689260:three_prime_UTR
AGTAAAGCTTTCTCAATTTC+AGG 0.162511 4_4:+56257979 Msa0689260:CDS
ATGATATATAAGACCATATT+TGG 0.164834 4_4:-56265577 None:intergenic
ACTTCTTTACACAGGATTTA+TGG 0.208613 4_4:+56263758 Msa0689260:intron
AAAGAAAGAAAAGAAGAAAA+AGG 0.230780 4_4:+56266245 Msa0689260:CDS
AACAAGCTCCCCAGTCAAAT+TGG 0.242849 4_4:-56259580 None:intergenic
TTAATGGGGTAGGTCGTCTT+AGG 0.250550 4_4:+56266674 Msa0689260:three_prime_UTR
AAAGAAGGAAAAGAAGAAAA+AGG 0.264932 4_4:+56266125 Msa0689260:CDS
CCCAACCATAGCAGTCAAAT+TGG 0.271023 4_4:-56265421 None:intergenic
CTGATATATTCTCAAACTTC+TGG 0.278126 4_4:-56264000 None:intergenic
CAAAGACAGCATTGGCTATC+AGG 0.281768 4_4:+56265661 Msa0689260:CDS
ATCCTTATGATTTATTTAAT+GGG 0.289216 4_4:+56266659 Msa0689260:three_prime_UTR
ACCTTGCTCGTCCAGGCTAT+TGG 0.308212 4_4:+56259022 Msa0689260:CDS
GCCATGAGGGTTCGAGAATA+TGG 0.315509 4_4:+56259082 Msa0689260:CDS
GAGCTGAGAAGGCTCTCTTT+AGG 0.330425 4_4:+56265529 Msa0689260:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.331075 4_4:+56265275 Msa0689260:CDS
TGATCTTAGCGAAATCATTC+AGG 0.332797 4_4:+56259117 Msa0689260:CDS
TGAAATTGGTGAACTAGATT+TGG 0.334002 4_4:+56259461 Msa0689260:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.339411 4_4:+56259434 Msa0689260:CDS
AGCTGAGAAGGCTCTCTTTA+GGG 0.345329 4_4:+56265530 Msa0689260:CDS
ACCTTGATCGGCCAGACTAT+TGG 0.348269 4_4:+56258854 Msa0689260:CDS
GGCATATCAGCAGCATCTTC+AGG 0.353786 4_4:-56266456 None:intergenic
GGTAGTACCGTGCAGATTCT+TGG 0.357226 4_4:+56265507 Msa0689260:CDS
GAAACTGGGGAATAACATTA+AGG 0.357812 4_4:+56258397 Msa0689260:CDS
TTATCATATGCCTCTATCTT+GGG 0.358705 4_4:-56265885 None:intergenic
ATATCTATGGGAACTGAAAT+TGG 0.360422 4_4:+56259447 Msa0689260:CDS
AGGAAAGCTTTCTGAAGTTC+AGG 0.363092 4_4:+56262921 Msa0689260:CDS
ATGTGTAGCTGATGCGAAAC+TGG 0.364897 4_4:+56258382 Msa0689260:CDS
ACCATGATCGTCCAGGCTAT+TGG 0.367547 4_4:+56264570 Msa0689260:CDS
TGAAGTTGGTGAACTAGATT+TGG 0.368410 4_4:+56265302 Msa0689260:CDS
GCAGCTAGTTTGTTGATTGA+TGG 0.370776 4_4:+56264034 Msa0689260:CDS
CTTATCATATGCCTCTATCT+TGG 0.380405 4_4:-56265886 None:intergenic
CAACTTCATGTTCTGGCTCC+TGG 0.380541 4_4:-56266317 None:intergenic
GAAGCTAGGTTCTTGATTGA+TGG 0.385766 4_4:+56258302 Msa0689260:CDS
CAGTTGACGGAACTCATAAC+TGG 0.386655 4_4:+56264303 Msa0689260:CDS
AATCTCGAAGGCAAAGAATT+AGG 0.387421 4_4:+56265834 Msa0689260:CDS
AGAACTTACTAAAATCATTC+AGG 0.388638 4_4:+56264668 Msa0689260:CDS
AACGCTGCCCCAACTTCCTC+TGG 0.396694 4_4:-56259408 None:intergenic
GAATACATCTGCCAGGCTAT+TGG 0.397100 4_4:+56258904 Msa0689260:CDS
AAACATGCTACTCCCAAATA+TGG 0.397940 4_4:+56265564 Msa0689260:CDS
ATATATCATGCATCATTGAT+TGG 0.403489 4_4:+56265591 Msa0689260:CDS
CGCAAGGTCTGTCAAGTTGA+TGG 0.404405 4_4:+56264704 Msa0689260:CDS
CTTCATTGAGCACTTTGAAA+AGG 0.407262 4_4:-56262900 None:intergenic
CTTCATCCAACAATTTGAAA+AGG 0.411047 4_4:-56257958 None:intergenic
CGATTTGCGGGTTCTGCTAA+AGG 0.412920 4_4:+56265858 Msa0689260:CDS
CCAATTTGACTGCTATGGTT+GGG 0.414603 4_4:+56265421 Msa0689260:CDS
GCTATGGTTGGGGAGCTTGT+TGG 0.416805 4_4:+56265432 Msa0689260:CDS
AAAGAATTAGGTCGATTTGC+GGG 0.418834 4_4:+56265846 Msa0689260:CDS
TACTGCAGACTCTGCAAGAA+AGG 0.420932 4_4:+56258110 Msa0689260:CDS
ACCATTGCACCCAATTTGAC+TGG 0.425520 4_4:+56259570 Msa0689260:CDS
TGTTCACAGCAATGCTGTTA+TGG 0.427112 4_4:+56264257 Msa0689260:CDS
GATTGTTTCTGAACCAAGGC+TGG 0.431179 4_4:+56259731 Msa0689260:CDS
ACTTGACAGACCTTGCGTAT+TGG 0.437943 4_4:-56264698 None:intergenic
AAGGATAGAAAGAAGGGAGC+TGG 0.441375 4_4:+56265906 Msa0689260:CDS
AGACATGGCTCCGATGAGCC+TGG 0.442031 4_4:+56264338 Msa0689260:CDS
TTCCAAAAGTGTTAAAATGT+TGG 0.449608 4_4:+56262849 Msa0689260:CDS
TTCATCCAACAATTTGAAAA+GGG 0.449761 4_4:-56257957 None:intergenic
GCTGTAGCTGATACGAAGTT+GGG 0.449844 4_4:+56264115 Msa0689260:CDS
TTGGCATCTGCTATTCAATC+TGG 0.455867 4_4:+56266542 Msa0689260:three_prime_UTR
AACAAAAGATATACCTTAGC+AGG 0.456722 4_4:-56265942 None:intergenic
TTCATTGAGCACTTTGAAAA+GGG 0.457174 4_4:-56262899 None:intergenic
GAAGTTGGGGACTATCATTA+AGG 0.458948 4_4:+56264129 Msa0689260:CDS
AGTTCAAGGGCAAAATTTCT+CGG 0.467618 4_4:+56265628 Msa0689260:CDS
AATTTGACTGGGGAGCTTGT+TGG 0.470859 4_4:+56259582 Msa0689260:CDS
CAGTGCGGATGCTGCAAGAA+AGG 0.471034 4_4:+56263792 Msa0689260:CDS
TTGGCAGATATTAGAGAGCT+AGG 0.471890 4_4:+56259480 Msa0689260:CDS
AGAAAAGAAGAAGAAAAGGA+AGG 0.475695 4_4:+56266347 Msa0689260:CDS
GGCTCTGTTCTCCAATCCCA+TGG 0.476474 4_4:-56265715 None:intergenic
ACCCCATTAAATAAATCATA+AGG 0.477459 4_4:-56266661 None:intergenic
ACAAGCTCCCCAGTCAAATT+GGG 0.478660 4_4:-56259579 None:intergenic
AATTAGGCGGACACCTTGAT+CGG 0.481064 4_4:+56258842 Msa0689260:intron
CTTTCTTGCAGCATCCGCAC+TGG 0.482863 4_4:-56263791 None:intergenic
CTCTTTCGGAATATAGAGCT+CGG 0.484469 4_4:+56259517 Msa0689260:CDS
AGCTGTAGCTGATACGAAGT+TGG 0.485755 4_4:+56264114 Msa0689260:CDS
TTGAAAAGGGCGAAACCCGC+AGG 0.486202 4_4:-56262886 None:intergenic
CAAGATAGAGGCATATGATA+AGG 0.489790 4_4:+56265887 Msa0689260:CDS
GTGCTCGCCTCATTGCCCAT+GGG 0.492711 4_4:+56265454 Msa0689260:CDS
ATATGATAAGGATAGAAAGA+AGG 0.493507 4_4:+56265899 Msa0689260:CDS
CCAACCATAGCAGTCAAATT+GGG 0.494028 4_4:-56265420 None:intergenic
CAATTTGACTGCTATGGTTG+GGG 0.494927 4_4:+56265422 Msa0689260:CDS
GATTTGCGGGTTCTGCTAAA+GGG 0.495464 4_4:+56265859 Msa0689260:CDS
AATTCTTTATACAGGACTCA+TGG 0.497638 4_4:+56258076 Msa0689260:intron
CCCAGTCAAATTGGGTGCAA+TGG 0.498431 4_4:-56259571 None:intergenic
TGATATATAAGACCATATTT+GGG 0.499043 4_4:-56265576 None:intergenic
TGAAGACAACACCATGGGAT+TGG 0.499977 4_4:+56265704 Msa0689260:CDS
ACCAATAGTCTGGCCGATCA+AGG 0.501999 4_4:-56258855 None:intergenic
CCCAATTTGACTGCTATGGT+TGG 0.502179 4_4:+56265420 Msa0689260:CDS
TGCACCCAATTTGACTGCTA+TGG 0.506074 4_4:+56265416 Msa0689260:CDS
GGTGCTCGCCTCATTGCCCA+TGG 0.506735 4_4:+56265453 Msa0689260:CDS
CAGAAGCTACAGAGGAAGCT+AGG 0.507232 4_4:+56258288 Msa0689260:CDS
TCTATGATTATCTAAAGAGC+AGG 0.507685 4_4:+56265382 Msa0689260:CDS
CAAGGTGTAAATAGAGCAAA+GGG 0.509219 4_4:-56266760 None:intergenic
GTATTATTTGAAACTCCTGC+AGG 0.509814 4_4:+56257929 Msa0689260:CDS
TATTAGAGAGCTAGGTGACC+AGG 0.511827 4_4:+56259488 Msa0689260:CDS
AATTAGGTGGTCAAATTGAA+AGG 0.512138 4_4:+56263974 Msa0689260:intron
CAAAGAATTAGGTCGATTTG+CGG 0.513905 4_4:+56265845 Msa0689260:CDS
TGAATGATTTCGCTAAGATC+AGG 0.515561 4_4:-56259115 None:intergenic
ACCAATAGCCTGGACGATCA+TGG 0.522254 4_4:-56264571 None:intergenic
CGTCGAGTAAACCAATAGTC+TGG 0.522801 4_4:-56258865 None:intergenic
GCAGATTCTTGGAGCTGAGA+AGG 0.524438 4_4:+56265518 Msa0689260:CDS
GTACCACACATCTCCAGCCT+TGG 0.527269 4_4:-56259744 None:intergenic
GGTGGACACCTTGCTCGTCC+AGG 0.527284 4_4:+56259015 Msa0689260:intron
GAACAACTACTGAGCTAAAG+AGG 0.527288 4_4:-56266588 None:intergenic
CTGCTATTCAATCTGGTGAA+TGG 0.528315 4_4:+56266549 Msa0689260:three_prime_UTR
TAATGGGGTAGGTCGTCTTA+GGG 0.528679 4_4:+56266675 Msa0689260:three_prime_UTR
TTGAAAAGGGCAAAACCTGC+AGG 0.531819 4_4:-56257944 None:intergenic
AGCAGTCAAATTGGGTGCAA+TGG 0.533807 4_4:-56265412 None:intergenic
TACCTCTCTTGAGCAGCTAC+CGG 0.534333 4_4:-56257056 None:intergenic
AGGATAATATTCAATATGCA+AGG 0.534458 4_4:+56259137 Msa0689260:CDS
AGAGACACAGATTTGAATGC+AGG 0.535080 4_4:+56266399 Msa0689260:CDS
CAATACACAGACCAATAGCC+TGG 0.535796 4_4:-56258915 None:intergenic
TAAAGGGAAGCCCAAGATAG+AGG 0.536666 4_4:+56265875 Msa0689260:CDS
GACATGGCTCCGATGAGCCT+GGG 0.541122 4_4:+56264339 Msa0689260:CDS
CCATTGCACCCAATTTGACT+GGG 0.544468 4_4:+56259571 Msa0689260:CDS
ATAAATCTTGCAAAGCAGCC+TGG 0.545223 4_4:+56265486 Msa0689260:CDS
GGGTTCGAGAATGGTATGGC+TGG 0.545668 4_4:+56264637 Msa0689260:CDS
ATGCCATGAGGGTTCGAGAA+TGG 0.547091 4_4:+56264628 Msa0689260:CDS
GCGGAATGGAACATGCAGAT+TGG 0.548923 4_4:+56266523 Msa0689260:three_prime_UTR
TCAAGCAGCTCCAAAGTTCA+AGG 0.549296 4_4:+56265614 Msa0689260:CDS
ATTCCGAAAGAGATAAAACT+TGG 0.550920 4_4:-56265347 None:intergenic
TGAGCAGCTACCGGAGGGGA+TGG 0.553222 4_4:-56257047 None:intergenic
AATGAGAACTCCATCCCCTC+CGG 0.555194 4_4:+56257037 None:intergenic
GCCATATTCTCGAACCCTCA+TGG 0.556332 4_4:-56259083 None:intergenic
CGTCAAGTAAACCAATAGCC+TGG 0.556425 4_4:-56259033 None:intergenic
AGGTATTCGATTTCAGTTGA+CGG 0.556860 4_4:+56264290 Msa0689260:CDS
CTAGGATTGTTTCTGAACCA+AGG 0.557174 4_4:+56259727 Msa0689260:intron
ATTCTTTATACAGGACTCAT+GGG 0.558037 4_4:+56258077 Msa0689260:intron
CGTCGAGTAAACCAATAGCC+TGG 0.559795 4_4:-56264581 None:intergenic
TTTATGATTATCTCAAGAGT+AGG 0.560116 4_4:+56259541 Msa0689260:CDS
TATGATTTATTTAATGGGGT+AGG 0.560475 4_4:+56266664 Msa0689260:three_prime_UTR
CATTGTCACAATGAGGAAGC+AGG 0.562702 4_4:-56258352 None:intergenic
TATGATAAGGATAGAAAGAA+GGG 0.562992 4_4:+56265900 Msa0689260:CDS
AGAATCTGCACGGTACTACC+AGG 0.563552 4_4:-56265504 None:intergenic
TGAGGGTTCGAGAATATGGC+TGG 0.567750 4_4:+56259086 Msa0689260:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568195 4_4:+56259435 Msa0689260:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568328 4_4:+56265276 Msa0689260:CDS
GCAAGGTGTAAATAGAGCAA+AGG 0.569224 4_4:-56266761 None:intergenic
GCTATCAGGTGTGATGCACT+TGG 0.570354 4_4:+56265675 Msa0689260:CDS
TGCAGCTTGAAGCGCGATTG+AGG 0.572330 4_4:+56265811 Msa0689260:intron
TCCTTATGATTTATTTAATG+GGG 0.572898 4_4:+56266660 Msa0689260:three_prime_UTR
TGATTATCTCAAGAGTAGGA+TGG 0.573495 4_4:+56259545 Msa0689260:CDS
AAGAGTTGAATACATCTGCC+AGG 0.573822 4_4:+56258897 Msa0689260:CDS
GCAAGGTCTGTCAAGTTGAT+GGG 0.574951 4_4:+56264705 Msa0689260:CDS
TCTCTTGAGCAGCTACCGGA+GGG 0.576583 4_4:-56257052 None:intergenic
CTCTCTTGAGCAGCTACCGG+AGG 0.578766 4_4:-56257053 None:intergenic
CTTTACACAGGATTTATGGA+AGG 0.579685 4_4:+56263762 Msa0689260:intron
TGAAAAGGGCGAAACCCGCA+GGG 0.581689 4_4:-56262885 None:intergenic
GCTTGCTGCAAAGACAGCAT+TGG 0.582410 4_4:+56265653 Msa0689260:CDS
TGCTCGCCTCATTGCCCATG+GGG 0.582657 4_4:+56265455 Msa0689260:CDS
ATATCTATGGGTACTGAAGT+TGG 0.583455 4_4:+56265288 Msa0689260:CDS
TGAGACAAACCCAGGCTCAT+CGG 0.584661 4_4:-56264348 None:intergenic
ACTTTGCAAGCTGATGTAGA+TGG 0.587306 4_4:+56266291 Msa0689260:CDS
ATACCATTCTCGAACCCTCA+TGG 0.587900 4_4:-56264631 None:intergenic
ACCAATAGCCTGGACGAGCA+AGG 0.589368 4_4:-56259023 None:intergenic
GATTGATGGAAAAGCTAGCA+AGG 0.589549 4_4:+56264048 Msa0689260:CDS
CTCCGGTAGCTGCTCAAGAG+AGG 0.589629 4_4:+56257054 Msa0689260:CDS
ATGTTCCATTCCGCTCTAGT+CGG 0.590834 4_4:-56266514 None:intergenic
TGTGTAGCTGATGCGAAACT+GGG 0.599064 4_4:+56258383 Msa0689260:CDS
GATAGAAAGAAGGGAGCTGG+AGG 0.601173 4_4:+56265909 Msa0689260:CDS
ATTGATGGAAAAGCTAGCAA+AGG 0.607482 4_4:+56258317 Msa0689260:CDS
ATTCCGAAAGAGATAAAACC+TGG 0.609367 4_4:-56259506 None:intergenic
AGCTGATGTAGATGGTGACC+AGG 0.610256 4_4:+56266299 Msa0689260:CDS
TCCACCTCAGTATTCTCAGT+AGG 0.610509 4_4:-56266372 None:intergenic
GGTTGACACCATGATCGTCC+AGG 0.612729 4_4:+56264563 Msa0689260:intron
GTACTGTTTGAAACCCCTGC+GGG 0.613719 4_4:+56262871 Msa0689260:CDS
AGGTGTGATGCACTTGGAGA+TGG 0.614670 4_4:+56265681 Msa0689260:CDS
ATGTATTCAACTCTTTATCG+AGG 0.616968 4_4:-56264605 None:intergenic
AAATGCCGACTAGAGCGGAA+TGG 0.618389 4_4:+56266509 Msa0689260:exon
GTTGAATACATATGCCATGA+GGG 0.622022 4_4:+56264617 Msa0689260:CDS
CTCAGCTCCAAGAATCTGCA+CGG 0.622477 4_4:-56265514 None:intergenic
TGCAAGGGCAGTCAAGCTGA+TGG 0.623680 4_4:+56259153 Msa0689260:CDS
CAAGCAGCTCCAAAGTTCAA+GGG 0.624371 4_4:+56265615 Msa0689260:CDS
ATGAGGGTTCGAGAATGGTA+TGG 0.625343 4_4:+56264633 Msa0689260:CDS
AGTATTGACCTTGTGGATTG+CGG 0.628657 4_4:-56262730 None:intergenic
GAATATATCAGAAGCTACAG+AGG 0.630088 4_4:+56258280 Msa0689260:CDS
GAATATATCAGAAGCTACAG+AGG 0.630088 4_4:+56264012 Msa0689260:CDS
AGGACTGATAACTCCTGCTA+AGG 0.630812 4_4:+56265929 Msa0689260:CDS
AGCAGCATCTTCAGGCTCTG+AGG 0.630929 4_4:-56266448 None:intergenic
GTTGAATGCATATGCCATGA+GGG 0.635503 4_4:+56259069 Msa0689260:CDS
TGGCCTCGCTGTTCAAGACA+TGG 0.636384 4_4:+56264323 Msa0689260:CDS
GTTGAAGTTCAGTGCAGACA+AGG 0.637677 4_4:+56264389 Msa0689260:CDS
TTGCTAACTTAAGATCAGCA+AGG 0.639367 4_4:-56266778 None:intergenic
GGATAATATTCAATATGCAA+GGG 0.639698 4_4:+56259138 Msa0689260:CDS
ACCTACTGAGAATACTGAGG+TGG 0.641535 4_4:+56266371 Msa0689260:CDS
CTGTAGCTGATACGAAGTTG+GGG 0.642131 4_4:+56264116 Msa0689260:CDS
ATAGACTATGAGACAAACCC+AGG 0.642701 4_4:-56264356 None:intergenic
CTCTTGAGCAGCTACCGGAG+GGG 0.644199 4_4:-56257051 None:intergenic
GCTGGAGATGTGTGGTACAA+TGG 0.644360 4_4:+56259749 Msa0689260:CDS
AGGATAATATCCAATACGCA+AGG 0.653312 4_4:+56264688 Msa0689260:CDS
GCTGCACACCGCAATCCACA+AGG 0.653882 4_4:+56262722 Msa0689260:CDS
CTTTATACAGGACTCATGGG+AGG 0.655695 4_4:+56258080 Msa0689260:intron
AACGTCTCATTGTCACAATG+AGG 0.656598 4_4:-56258359 None:intergenic
GATGGTGAAGACAACACCAT+GGG 0.656945 4_4:+56265699 Msa0689260:CDS
AGTTGAATGCATATGCCATG+AGG 0.660976 4_4:+56259068 Msa0689260:CDS
ATTGATGGAAAAGCTAGCAA+GGG 0.667037 4_4:+56264049 Msa0689260:CDS
AGTTGAATACATATGCCATG+AGG 0.670426 4_4:+56264616 Msa0689260:CDS
GGGATTGGAGAACAGAGCCA+AGG 0.677522 4_4:+56265719 Msa0689260:CDS
GCTCGCCTCATTGCCCATGG+GGG 0.687875 4_4:+56265456 Msa0689260:CDS
GCGCGATTGAGGAATCTCGA+AGG 0.689896 4_4:+56265822 Msa0689260:CDS
CATTGCACCCAATTTGACTG+GGG 0.691074 4_4:+56259572 Msa0689260:CDS
CATTATCACAATGAGCACGC+AGG 0.694162 4_4:-56264084 None:intergenic
TGCAGAGCTCGATTTCTCTG+AGG 0.700222 4_4:+56259192 Msa0689260:CDS
GAAAAGGGCGAAACCCGCAG+GGG 0.700713 4_4:-56262884 None:intergenic
TGCAAAGCTTGATTTCTCCG+AGG 0.702184 4_4:+56264743 Msa0689260:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 4_4:+56258545 Msa0689260:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 4_4:+56264270 Msa0689260:CDS
AGATGGTGAAGACAACACCA+TGG 0.721514 4_4:+56265698 Msa0689260:CDS
GAACCAAGGCTGGAGATGTG+TGG 0.726071 4_4:+56259741 Msa0689260:CDS
GGTACTGTTTGAAACCCCTG+CGG 0.734058 4_4:+56262870 Msa0689260:CDS
GGAACCTACTGAGAATACTG+AGG 0.738690 4_4:+56266368 Msa0689260:CDS
AGTCAAGTTCGTGAGCAGCG+AGG 0.738868 4_4:-56259611 None:intergenic
GATTGCGGTGTGCAGCAGAG+CGG 0.740149 4_4:-56262715 None:intergenic
GTGTAGCTGATGCGAAACTG+GGG 0.746718 4_4:+56258384 Msa0689260:CDS
GAGCCATGTCTTGAACAGCG+AGG 0.799226 4_4:-56264326 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATATTCTAATCATTT+CGG - chr4_4:56257571-56257590 None:intergenic 10.0%
!!! TTATAAATTTCATTTTTTGA+GGG - chr4_4:56257645-56257664 None:intergenic 10.0%
!!! TTTATAAATTTCATTTTTTG+AGG - chr4_4:56257646-56257665 None:intergenic 10.0%
!! GTAAAAAAATAAATTAAACA+TGG + chr4_4:56261566-56261585 Msa0689260:intron 10.0%
!! TAATGATTTAATTAAATGTA+GGG - chr4_4:56261726-56261745 None:intergenic 10.0%
!! ATAATGATTTAATTAAATGT+AGG - chr4_4:56261727-56261746 None:intergenic 10.0%
!! TAAAATATCTTTACAAATAA+GGG + chr4_4:56261876-56261895 Msa0689260:intron 10.0%
!!! CAAAATTTGTTAAAATTATA+GGG - chr4_4:56262031-56262050 None:intergenic 10.0%
!!! TCAAAATTTGTTAAAATTAT+AGG - chr4_4:56262032-56262051 None:intergenic 10.0%
!!! AAATAAACAAAAATTTTACA+AGG + chr4_4:56262165-56262184 Msa0689260:intron 10.0%
!!! AAGTCATAAAAATTAATTTT+TGG + chr4_4:56262254-56262273 Msa0689260:intron 10.0%
!!! AGTCATAAAAATTAATTTTT+GGG + chr4_4:56262255-56262274 Msa0689260:intron 10.0%
!! CAAAATTCTAAATATTTATA+GGG - chr4_4:56262298-56262317 None:intergenic 10.0%
!! ACAAAATTCTAAATATTTAT+AGG - chr4_4:56262299-56262318 None:intergenic 10.0%
!! ACAAAATTATGTATATTTAT+AGG + chr4_4:56262516-56262535 Msa0689260:intron 10.0%
!! CAAAATTATGTATATTTATA+GGG + chr4_4:56262517-56262536 Msa0689260:intron 10.0%
!!! CTATTTCTTTATAAAATTAA+GGG - chr4_4:56262560-56262579 None:intergenic 10.0%
!!! CTTAATTTTATAAAGAAATA+GGG + chr4_4:56262559-56262578 Msa0689260:intron 10.0%
!!! TTAATTTTATAAAGAAATAG+GGG + chr4_4:56262560-56262579 Msa0689260:intron 10.0%
!!! ATTTTTTTCCAAAAAAAAAA+AGG - chr4_4:56263196-56263215 None:intergenic 10.0%
!! TAAATATTATTTGTTTAAAG+AGG - chr4_4:56264953-56264972 None:intergenic 10.0%
!!! CAAAATTTTAGATATTTACA+TGG - chr4_4:56257440-56257459 None:intergenic 15.0%
!!! TATAAATTTCATTTTTTGAG+GGG - chr4_4:56257644-56257663 None:intergenic 15.0%
!! TTATACAAAATTCTTTATAC+AGG + chr4_4:56258068-56258087 Msa0689260:intron 15.0%
!!! ACCTTAAAATGATTTTTATT+AGG + chr4_4:56258994-56259013 Msa0689260:intron 15.0%
!!! ACCTAATAAAAATCATTTTA+AGG - chr4_4:56258998-56259017 None:intergenic 15.0%
!!! TTAAAATGATTTTTATTAGG+TGG + chr4_4:56258997-56259016 Msa0689260:intron 15.0%
!!! AAATGTCTTTTTTTTTTTGA+GGG - chr4_4:56260783-56260802 None:intergenic 15.0%
!!! AAAATGTCTTTTTTTTTTTG+AGG - chr4_4:56260784-56260803 None:intergenic 15.0%
!!! CTAAAGTTTTTAAATGTTTT+GGG - chr4_4:56260926-56260945 None:intergenic 15.0%
!!! ACTAAAGTTTTTAAATGTTT+TGG - chr4_4:56260927-56260946 None:intergenic 15.0%
!!! TAAAAATTAAAAAAGCACAA+TGG + chr4_4:56261030-56261049 Msa0689260:intron 15.0%
!!! TTTGTTTGAAATAATAGATA+AGG - chr4_4:56261408-56261427 None:intergenic 15.0%
!! ATCAAAAATAGATTAAATCA+AGG + chr4_4:56261541-56261560 Msa0689260:intron 15.0%
!! GTAAAATATCTTTACAAATA+AGG + chr4_4:56261875-56261894 Msa0689260:intron 15.0%
!!! AAAACAAAAATTTTACAAGA+TGG - chr4_4:56261946-56261965 None:intergenic 15.0%
!!! AAAAAAAGCTTTAAATTACA+AGG - chr4_4:56261978-56261997 None:intergenic 15.0%
!!! TTGTAATTTAAAGCTTTTTT+TGG + chr4_4:56261977-56261996 Msa0689260:intron 15.0%
!!! AATTTTAAGATTTTTGGTTT+TGG - chr4_4:56262134-56262153 None:intergenic 15.0%
!! CAAGTAATTATTTGTAATAT+AGG - chr4_4:56262207-56262226 None:intergenic 15.0%
!!! CCTATTTCTTTATAAAATTA+AGG - chr4_4:56262561-56262580 None:intergenic 15.0%
!!! CCTTAATTTTATAAAGAAAT+AGG + chr4_4:56262558-56262577 Msa0689260:intron 15.0%
!! ACTGAGTAATTAAAATTTAA+GGG - chr4_4:56263476-56263495 None:intergenic 15.0%
!! TACTGAGTAATTAAAATTTA+AGG - chr4_4:56263477-56263496 None:intergenic 15.0%
!!! TTTTTTTTCGATAATTGAAT+CGG - chr4_4:56266046-56266065 None:intergenic 15.0%
!! ATCCTTATGATTTATTTAAT+GGG + chr4_4:56266659-56266678 Msa0689260:three_prime_UTR 15.0%
!!! ACTTGTTGTAATTTTTTAGA+GGG - chr4_4:56257470-56257489 None:intergenic 20.0%
!!! AACTTGTTGTAATTTTTTAG+AGG - chr4_4:56257471-56257490 None:intergenic 20.0%
!! AAACAGTGAAATGAAATATT+CGG - chr4_4:56257502-56257521 None:intergenic 20.0%
!!! TGTTTTTAAATCAATTCATG+TGG + chr4_4:56257517-56257536 Msa0689260:intron 20.0%
!! ACACGATAACATATATAATA+AGG + chr4_4:56257807-56257826 Msa0689260:intron 20.0%
!! AATAACATTAAGGAAAAACT+GGG + chr4_4:56258407-56258426 Msa0689260:CDS 20.0%
!!! CTTTTTTTTTTTTTTGTTGC+CGG + chr4_4:56258772-56258791 Msa0689260:intron 20.0%
!!! TCCTGACATTTTTTTTAATT+AGG + chr4_4:56258826-56258845 Msa0689260:intron 20.0%
!!! TGACATTTTTTTTAATTAGG+CGG + chr4_4:56258829-56258848 Msa0689260:intron 20.0%
!!! ATAAAAATCATTTTAAGGTC+AGG - chr4_4:56258993-56259012 None:intergenic 20.0%
!!! ATGGTCTTATATTTATTTCT+AGG + chr4_4:56259709-56259728 Msa0689260:intron 20.0%
!! AAGATTACAAATGAATTCAA+TGG - chr4_4:56259902-56259921 None:intergenic 20.0%
!! ACAGTAAGTAAATACTTATA+GGG - chr4_4:56260669-56260688 None:intergenic 20.0%
!! GTGGTTTCAAAATTTAAAAA+GGG - chr4_4:56261076-56261095 None:intergenic 20.0%
!!! TTACTTCTTTTTAACTAGAT+GGG + chr4_4:56261333-56261352 Msa0689260:intron 20.0%
!!! AATCATTATAGCATCTTTTT+CGG + chr4_4:56261738-56261757 Msa0689260:intron 20.0%
!!! AAATCATGATAGCATATTTT+TGG + chr4_4:56261844-56261863 Msa0689260:intron 20.0%
!!! AATCATGATAGCATATTTTT+GGG + chr4_4:56261845-56261864 Msa0689260:intron 20.0%
!! AAAATTTCCTCAAATTATAG+GGG - chr4_4:56262059-56262078 None:intergenic 20.0%
!! CAAAATTTCCTCAAATTATA+GGG - chr4_4:56262060-56262079 None:intergenic 20.0%
!!! CCTTGTAATTTTAAGATTTT+TGG - chr4_4:56262140-56262159 None:intergenic 20.0%
!! CCAAAAATCTTAAAATTACA+AGG + chr4_4:56262137-56262156 Msa0689260:intron 20.0%
!!! TAAACAAAAATTTTACAAGG+TGG + chr4_4:56262168-56262187 Msa0689260:intron 20.0%
!!! TGCTGATGAAATTTTTTATA+GGG - chr4_4:56262358-56262377 None:intergenic 20.0%
!!! ATGCTGATGAAATTTTTTAT+AGG - chr4_4:56262359-56262378 None:intergenic 20.0%
!!! TTGAAGCTTTTTTCTTTATA+GGG - chr4_4:56262659-56262678 None:intergenic 20.0%
!!! TTGTATCTTGTATGTTTTTA+AGG + chr4_4:56263125-56263144 Msa0689260:intron 20.0%
!! GGATACAACTAAAAAAAAAA+GGG - chr4_4:56263392-56263411 None:intergenic 20.0%
!! AGGATACAACTAAAAAAAAA+AGG - chr4_4:56263393-56263412 None:intergenic 20.0%
!! TATGAATTATAGTGATGTAT+GGG + chr4_4:56263420-56263439 Msa0689260:intron 20.0%
!! TTCAAATTTCAAATGATCAT+CGG - chr4_4:56263558-56263577 None:intergenic 20.0%
!! CAATTGAAGGATTTATAAAT+GGG - chr4_4:56263836-56263855 None:intergenic 20.0%
!! ATGTAAAAGAGTAAAACAAT+TGG - chr4_4:56264797-56264816 None:intergenic 20.0%
!!! TTTGATTTACTCTTAAATCT+TGG + chr4_4:56264840-56264859 Msa0689260:intron 20.0%
!!! TGTAATATGTTTTAGGATAA+AGG - chr4_4:56265222-56265241 None:intergenic 20.0%
!!! CAAAATCTGTAATATGTTTT+AGG - chr4_4:56265229-56265248 None:intergenic 20.0%
!! TGATATATAAGACCATATTT+GGG - chr4_4:56265579-56265598 None:intergenic 20.0%
!! ATGATATATAAGACCATATT+TGG - chr4_4:56265580-56265599 None:intergenic 20.0%
!! TGATAAAAAGAAAGAAAAGA+AGG + chr4_4:56266221-56266240 Msa0689260:CDS 20.0%
!! AAAGAAAGAAAAGAAGAAAA+AGG + chr4_4:56266245-56266264 Msa0689260:CDS 20.0%
!! AAAAAGAAAAGAAGAAGAAA+AGG + chr4_4:56266343-56266362 Msa0689260:CDS 20.0%
!!! CTTTTTTCTTTCTTTTTGTT+TGG - chr4_4:56266480-56266499 None:intergenic 20.0%
!! CAAACAAAAAGAAAGAAAAA+AGG + chr4_4:56266478-56266497 Msa0689260:CDS 20.0%
!! ATGACAAGTAAAAATAATAC+TGG - chr4_4:56266613-56266632 None:intergenic 20.0%
!! CATCCTTATGATTTATTTAA+TGG + chr4_4:56266658-56266677 Msa0689260:three_prime_UTR 20.0%
!! TCCTTATGATTTATTTAATG+GGG + chr4_4:56266660-56266679 Msa0689260:three_prime_UTR 20.0%
!! TATTTCATCTTTTAGTGGTT+AGG - chr4_4:56257220-56257239 None:intergenic 25.0%
!! TCAAGTATTTCATCTTTTAG+TGG - chr4_4:56257225-56257244 None:intergenic 25.0%
! TTTGTTTGTCTATTGTAGTT+TGG - chr4_4:56257257-56257276 None:intergenic 25.0%
!! TTTTAGATATTTACATGGTG+TGG - chr4_4:56257435-56257454 None:intergenic 25.0%
! AACAGTGAAATGAAATATTC+GGG - chr4_4:56257501-56257520 None:intergenic 25.0%
!! ATCGTTTTACTTATTGGAAA+AGG + chr4_4:56257855-56257874 Msa0689260:intron 25.0%
! TTCATCCAACAATTTGAAAA+GGG - chr4_4:56257960-56257979 None:intergenic 25.0%
! GAATAACATTAAGGAAAAAC+TGG + chr4_4:56258406-56258425 Msa0689260:CDS 25.0%
! GCCTAATTAAAAAAAATGTC+AGG - chr4_4:56258830-56258849 None:intergenic 25.0%
! AGGATAATATTCAATATGCA+AGG + chr4_4:56259137-56259156 Msa0689260:CDS 25.0%
! GGATAATATTCAATATGCAA+GGG + chr4_4:56259138-56259157 Msa0689260:CDS 25.0%
!! AGCTTTAGTGTAAAACAAAT+CGG - chr4_4:56259247-56259266 None:intergenic 25.0%
! ACCTAACATATTTGAAAACA+CGG + chr4_4:56259281-56259300 Msa0689260:intron 25.0%
! TTTATGATTATCTCAAGAGT+AGG + chr4_4:56259541-56259560 Msa0689260:CDS 25.0%
! AAATATGCTACTCTCAAATA+TGG + chr4_4:56259690-56259709 Msa0689260:intron 25.0%
! TTAACTGAATTATGTTGAGT+CGG + chr4_4:56259791-56259810 Msa0689260:intron 25.0%
!!! TTTTGTTATCCAATTGCAAT+TGG + chr4_4:56260032-56260051 Msa0689260:intron 25.0%
!! TATCATTTTCCAATTGCAAT+TGG - chr4_4:56260044-56260063 None:intergenic 25.0%
!!! AATTGGCTAAAAGTTTTTTG+TGG + chr4_4:56260171-56260190 Msa0689260:intron 25.0%
! AAAATCATGATGACTAAACA+AGG - chr4_4:56260248-56260267 None:intergenic 25.0%
! GTGTATATACATATTAGTGT+TGG - chr4_4:56260311-56260330 None:intergenic 25.0%
! AGGAAAATAACAAAACTAAG+CGG + chr4_4:56260352-56260371 Msa0689260:intron 25.0%
!! ACGTTAAACTCTTTTCATAT+AGG + chr4_4:56260616-56260635 Msa0689260:intron 25.0%
!! CGTTAAACTCTTTTCATATA+GGG + chr4_4:56260617-56260636 Msa0689260:intron 25.0%
! GACAGTAAGTAAATACTTAT+AGG - chr4_4:56260670-56260689 None:intergenic 25.0%
! TATTTACTTACTGTCATATC+CGG + chr4_4:56260675-56260694 Msa0689260:intron 25.0%
! TTGTACAAGTACTTATAATC+CGG - chr4_4:56260697-56260716 None:intergenic 25.0%
! GGTGGTTTCAAAATTTAAAA+AGG - chr4_4:56261077-56261096 None:intergenic 25.0%
! AAAATGAAGTCGAATTTGAT+TGG + chr4_4:56261229-56261248 Msa0689260:intron 25.0%
! ACCAAAACAAAACAAAAACT+TGG + chr4_4:56261292-56261311 Msa0689260:intron 25.0%
!!! ACCAAGTTTTTGTTTTGTTT+TGG - chr4_4:56261296-56261315 None:intergenic 25.0%
! CAAAACAAAAACTTGGTTAA+CGG + chr4_4:56261299-56261318 Msa0689260:intron 25.0%
!!! GTTACTTCTTTTTAACTAGA+TGG + chr4_4:56261332-56261351 Msa0689260:intron 25.0%
!!! TACTTCTTTTTAACTAGATG+GGG + chr4_4:56261334-56261353 Msa0689260:intron 25.0%
! AATAAATTAAACATGGAGTG+AGG + chr4_4:56261573-56261592 Msa0689260:intron 25.0%
! ATAAATTAAACATGGAGTGA+GGG + chr4_4:56261574-56261593 Msa0689260:intron 25.0%
!!! AAATCACTTTTTAGACACAT+CGG - chr4_4:56261647-56261666 None:intergenic 25.0%
!!! TTTTGGTTTTGAACATATCT+TGG + chr4_4:56261994-56262013 Msa0689260:intron 25.0%
! CCAAAATTTCCTCAAATTAT+AGG - chr4_4:56262061-56262080 None:intergenic 25.0%
!! CCTATAATTTGAGGAAATTT+TGG + chr4_4:56262058-56262077 Msa0689260:intron 25.0%
!! TTTTGGATCTTCATGAATTT+TGG - chr4_4:56262117-56262136 None:intergenic 25.0%
!!! AAAAATTCCGTCAACTTTTT+TGG + chr4_4:56262426-56262445 Msa0689260:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr4_4:56262453-56262472 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr4_4:56262454-56262473 None:intergenic 25.0%
!!! GTTGAAGCTTTTTTCTTTAT+AGG - chr4_4:56262660-56262679 None:intergenic 25.0%
!!! TTTTGATGCTTTTGTTTTTC+AGG + chr4_4:56262822-56262841 Msa0689260:intron 25.0%
!!! TTCCAAAAGTGTTAAAATGT+TGG + chr4_4:56262849-56262868 Msa0689260:CDS 25.0%
!!! TACCAACATTTTAACACTTT+TGG - chr4_4:56262854-56262873 None:intergenic 25.0%
!!! TTCAGTTTTTTCAATTGCAA+TGG + chr4_4:56262996-56263015 Msa0689260:intron 25.0%
!! TTGCATTTTCAGCTTATTTA+AGG + chr4_4:56263064-56263083 Msa0689260:intron 25.0%
!!! GAACACTGTTTTTTTTTGTA+AGG + chr4_4:56263147-56263166 Msa0689260:intron 25.0%
!! CCAAAAAAAAAAAGGTGTAA+TGG - chr4_4:56263188-56263207 None:intergenic 25.0%
!!! CCATTACACCTTTTTTTTTT+TGG + chr4_4:56263185-56263204 Msa0689260:intron 25.0%
! ACTATAATTCATAGATCATG+AGG - chr4_4:56263413-56263432 None:intergenic 25.0%
! CTATGAATTATAGTGATGTA+TGG + chr4_4:56263419-56263438 Msa0689260:intron 25.0%
! ATGAATTATAGTGATGTATG+GGG + chr4_4:56263421-56263440 Msa0689260:intron 25.0%
! GCAATTGAAGGATTTATAAA+TGG - chr4_4:56263837-56263856 None:intergenic 25.0%
! AAACATCAAAAGTTTCTTAG+GGG - chr4_4:56264179-56264198 None:intergenic 25.0%
! CAAACATCAAAAGTTTCTTA+GGG - chr4_4:56264180-56264199 None:intergenic 25.0%
! TCAAACATCAAAAGTTTCTT+AGG - chr4_4:56264181-56264200 None:intergenic 25.0%
! AAATCGATAAACATTTGCTT+CGG - chr4_4:56264466-56264485 None:intergenic 25.0%
!!! TTTTTTTTTCTTCTGATGTC+TGG + chr4_4:56264484-56264503 Msa0689260:intron 25.0%
!!! TGAATGATTTTAGTAAGTTC+TGG - chr4_4:56264669-56264688 None:intergenic 25.0%
! AGAACTTACTAAAATCATTC+AGG + chr4_4:56264668-56264687 Msa0689260:CDS 25.0%
! TACCTACATGATTGAAAATA+CGG + chr4_4:56264909-56264928 Msa0689260:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr4_4:56265061-56265080 Msa0689260:intron 25.0%
! TGTGATGAAAAAAGATCAAA+TGG - chr4_4:56265176-56265195 None:intergenic 25.0%
! ATATATCATGCATCATTGAT+TGG + chr4_4:56265591-56265610 Msa0689260:CDS 25.0%
! AAAAATGTGTAAGTGAAGTT+TGG - chr4_4:56265787-56265806 None:intergenic 25.0%
! ATATGATAAGGATAGAAAGA+AGG + chr4_4:56265899-56265918 Msa0689260:CDS 25.0%
! TATGATAAGGATAGAAAGAA+GGG + chr4_4:56265900-56265919 Msa0689260:CDS 25.0%
!! AGGTATATCTTTTGTTCATT+TGG + chr4_4:56265949-56265968 Msa0689260:intron 25.0%
!!! TTTGTTCATTTGGTATTGAT+TGG + chr4_4:56265959-56265978 Msa0689260:intron 25.0%
! AAAAAAATCTGATTCTGCAA+TGG + chr4_4:56266059-56266078 Msa0689260:CDS 25.0%
! TGATAAAAAGAAAGCAAAGA+AGG + chr4_4:56266110-56266129 Msa0689260:CDS 25.0%
! AAAGAAGGAAAAGAAGAAAA+AGG + chr4_4:56266125-56266144 Msa0689260:CDS 25.0%
! AAAGAAGAAAAAGGACAAAA+AGG + chr4_4:56266134-56266153 Msa0689260:CDS 25.0%
! ACAAAAATCTAATACTGCAA+TGG + chr4_4:56266170-56266189 Msa0689260:CDS 25.0%
! AAAGAAGAAAAAGGAGAAAA+AGG + chr4_4:56266254-56266273 Msa0689260:CDS 25.0%
! ACCCCATTAAATAAATCATA+AGG - chr4_4:56266664-56266683 None:intergenic 25.0%
! TATGATTTATTTAATGGGGT+AGG + chr4_4:56266664-56266683 Msa0689260:three_prime_UTR 25.0%
!! TAGGGTAAATTTTGTCTTTT+TGG + chr4_4:56266693-56266712 Msa0689260:three_prime_UTR 25.0%
TCTTGATAGGTAGATCTTAT+TGG - chr4_4:56257287-56257306 None:intergenic 30.0%
! TCTCTGATCGTTTTACTTAT+TGG + chr4_4:56257849-56257868 Msa0689260:intron 30.0%
!!! ATTTTGATGCTTTGTTTTCC+AGG + chr4_4:56257882-56257901 Msa0689260:intron 30.0%
! TTTTGCCCTTTTCAAATTGT+TGG + chr4_4:56257952-56257971 Msa0689260:CDS 30.0%
CTTCATCCAACAATTTGAAA+AGG - chr4_4:56257961-56257980 None:intergenic 30.0%
AGTAAAGCTTTCTCAATTTC+AGG + chr4_4:56257979-56257998 Msa0689260:CDS 30.0%
AATTCTTTATACAGGACTCA+TGG + chr4_4:56258076-56258095 Msa0689260:intron 30.0%
ATTCTTTATACAGGACTCAT+GGG + chr4_4:56258077-56258096 Msa0689260:intron 30.0%
GACGCATATAAACAGATTAA+GGG - chr4_4:56258167-56258186 None:intergenic 30.0%
AGACGCATATAAACAGATTA+AGG - chr4_4:56258168-56258187 None:intergenic 30.0%
CACACAAGTTATGCATAATT+AGG + chr4_4:56258226-56258245 Msa0689260:intron 30.0%
ACAAGTTATGCATAATTAGG+TGG + chr4_4:56258229-56258248 Msa0689260:intron 30.0%
ATGTCATCACAAGTTACTAA+GGG - chr4_4:56258454-56258473 None:intergenic 30.0%
AATGTCATCACAAGTTACTA+AGG - chr4_4:56258455-56258474 None:intergenic 30.0%
CATCAAATAGCTAACTTTGT+CGG + chr4_4:56258487-56258506 Msa0689260:intron 30.0%
! TTTTCACAACAATGCTGTTA+TGG + chr4_4:56258532-56258551 Msa0689260:CDS 30.0%
GCTTCAACTTGTATATTGAT+AGG - chr4_4:56258652-56258671 None:intergenic 30.0%
GCTTTAGTGTAAAACAAATC+GGG - chr4_4:56259246-56259265 None:intergenic 30.0%
! ACCGTGTTTTCAAATATGTT+AGG - chr4_4:56259285-56259304 None:intergenic 30.0%
!! TTTGTATAAAGAAGCATCAC+AGG - chr4_4:56259316-56259335 None:intergenic 30.0%
CAAAAGCTGAAATATGTTTC+AGG - chr4_4:56259388-56259407 None:intergenic 30.0%
ATATCTATGGGAACTGAAAT+TGG + chr4_4:56259447-56259466 Msa0689260:CDS 30.0%
TGAAATTGGTGAACTAGATT+TGG + chr4_4:56259461-56259480 Msa0689260:CDS 30.0%
GATAGATAACTGTTCCTATA+GGG + chr4_4:56259818-56259837 Msa0689260:intron 30.0%
CAAAAGAAAAATTCCACACA+TGG - chr4_4:56260017-56260036 None:intergenic 30.0%
TGATGACTAAACAAGGTAAT+TGG - chr4_4:56260241-56260260 None:intergenic 30.0%
! ACATATTAGTGTTGGAGTAT+CGG - chr4_4:56260303-56260322 None:intergenic 30.0%
ATTCAATCGTACAGATGAAA+AGG + chr4_4:56260332-56260351 Msa0689260:intron 30.0%
GGAAAATAACAAAACTAAGC+GGG + chr4_4:56260353-56260372 Msa0689260:intron 30.0%
TGAAATTGAATGCCTATTGT+CGG - chr4_4:56260644-56260663 None:intergenic 30.0%
ACAATAATTGTAGTCACATC+AGG - chr4_4:56260878-56260897 None:intergenic 30.0%
GATGTATTCTCAACAAATAG+GGG - chr4_4:56260904-56260923 None:intergenic 30.0%
GGATGTATTCTCAACAAATA+GGG - chr4_4:56260905-56260924 None:intergenic 30.0%
TGAAGAAGATCTTAACTCAT+CGG + chr4_4:56260973-56260992 Msa0689260:intron 30.0%
ATCACTGCAAAATCCATTAT+AGG + chr4_4:56261121-56261140 Msa0689260:intron 30.0%
! TTTAAAGTTTACTTCCACCA+TGG - chr4_4:56261188-56261207 None:intergenic 30.0%
!!! TTTTGTTTTGGTAAGCTCTT+GGG - chr4_4:56261284-56261303 None:intergenic 30.0%
TCAATTTGATTCACGACAAA+TGG - chr4_4:56261451-56261470 None:intergenic 30.0%
GGTTTAATTAGAATGCTGAT+AGG - chr4_4:56261705-56261724 None:intergenic 30.0%
AAAATAGCCTACATTACATG+GGG - chr4_4:56261916-56261935 None:intergenic 30.0%
GAAAATAGCCTACATTACAT+GGG - chr4_4:56261917-56261936 None:intergenic 30.0%
AGAAAATAGCCTACATTACA+TGG - chr4_4:56261918-56261937 None:intergenic 30.0%
TGATTTACCCCTATAATTTG+AGG + chr4_4:56262049-56262068 Msa0689260:intron 30.0%
CAAAATCGATGATATGACAA+GGG - chr4_4:56262089-56262108 None:intergenic 30.0%
ACAAAATCGATGATATGACA+AGG - chr4_4:56262090-56262109 None:intergenic 30.0%
!!! GTCATATCATCGATTTTGTA+CGG + chr4_4:56262091-56262110 Msa0689260:intron 30.0%
!!! AATGCTGATTTTTCGTTGTA+GGG - chr4_4:56262329-56262348 None:intergenic 30.0%
!!! AAATGCTGATTTTTCGTTGT+AGG - chr4_4:56262330-56262349 None:intergenic 30.0%
!!! GTTGACGGAATTTTTTGATA+GGG - chr4_4:56262421-56262440 None:intergenic 30.0%
!!! AGTTGACGGAATTTTTTGAT+AGG - chr4_4:56262422-56262441 None:intergenic 30.0%
! TTCATTGAGCACTTTGAAAA+GGG - chr4_4:56262902-56262921 None:intergenic 30.0%
! CTGGATAAGGTATCTAAAAA+AGG - chr4_4:56263336-56263355 None:intergenic 30.0%
AAAAAAAGGGTTGTGTTAAC+CGG - chr4_4:56263379-56263398 None:intergenic 30.0%
! TCTAGTTTGTAATCTATCAG+AGG + chr4_4:56263502-56263521 Msa0689260:intron 30.0%
GTTCATATTATAGTGAACTG+TGG + chr4_4:56263670-56263689 Msa0689260:intron 30.0%
ATTTGCAAACTTCTTTACAC+AGG + chr4_4:56263750-56263769 Msa0689260:intron 30.0%
ACTTCTTTACACAGGATTTA+TGG + chr4_4:56263758-56263777 Msa0689260:intron 30.0%
TGATGTTGGCAATATTATGA+TGG + chr4_4:56263865-56263884 Msa0689260:intron 30.0%
GATGTTGGCAATATTATGAT+GGG + chr4_4:56263866-56263885 Msa0689260:intron 30.0%
ATGTTGGCAATATTATGATG+GGG + chr4_4:56263867-56263886 Msa0689260:intron 30.0%
AATTAGGTGGTCAAATTGAA+AGG + chr4_4:56263974-56263993 Msa0689260:intron 30.0%
CTGATATATTCTCAAACTTC+TGG - chr4_4:56264003-56264022 None:intergenic 30.0%
GACTATCATTAAGGAAAAAC+TGG + chr4_4:56264138-56264157 Msa0689260:CDS 30.0%
AACATCAAAAGTTTCTTAGG+GGG - chr4_4:56264178-56264197 None:intergenic 30.0%
ATGTATTCAACTCTTTATCG+AGG - chr4_4:56264608-56264627 None:intergenic 30.0%
! GACAAATTGTATTTCTACCT+CGG - chr4_4:56264763-56264782 None:intergenic 30.0%
ATGTAGGTAAAGAAAGAGTA+CGG - chr4_4:56264898-56264917 None:intergenic 30.0%
! AACCGTATTTTCAATCATGT+AGG - chr4_4:56264914-56264933 None:intergenic 30.0%
TTTGTTTAAAGAGGAATCAC+AGG - chr4_4:56264944-56264963 None:intergenic 30.0%
! TGGTTTTTGATAGAACACAA+TGG - chr4_4:56265057-56265076 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG - chr4_4:56265101-56265120 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG + chr4_4:56265108-56265127 Msa0689260:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr4_4:56265118-56265137 Msa0689260:intron 30.0%
GATGAAAAAAGATCAAATGG+AGG - chr4_4:56265173-56265192 None:intergenic 30.0%
!! CATATTACAGATTTTGACAG+AGG + chr4_4:56265233-56265252 Msa0689260:intron 30.0%
!! TGACCAAGTTTTATCTCTTT+CGG + chr4_4:56265344-56265363 Msa0689260:CDS 30.0%
ATTCCGAAAGAGATAAAACT+TGG - chr4_4:56265350-56265369 None:intergenic 30.0%
TCTATGATTATCTAAAGAGC+AGG + chr4_4:56265382-56265401 Msa0689260:CDS 30.0%
AGTTTGGTATAACAACCATA+GGG - chr4_4:56265771-56265790 None:intergenic 30.0%
AAGTTTGGTATAACAACCAT+AGG - chr4_4:56265772-56265791 None:intergenic 30.0%
TTATCATATGCCTCTATCTT+GGG - chr4_4:56265888-56265907 None:intergenic 30.0%
AACAAAAGATATACCTTAGC+AGG - chr4_4:56265945-56265964 None:intergenic 30.0%
! TTTTTCACAACTTCATGTTC+TGG - chr4_4:56266327-56266346 None:intergenic 30.0%
AGAAAAGAAGAAGAAAAGGA+AGG + chr4_4:56266347-56266366 Msa0689260:CDS 30.0%
! GCTAAAGAGGTATACAAAAA+TGG - chr4_4:56266578-56266597 None:intergenic 30.0%
!! TTCATGCAACTATGTTTTTG+AGG + chr4_4:56266723-56266742 Msa0689260:three_prime_UTR 30.0%
!! TCATGCAACTATGTTTTTGA+GGG + chr4_4:56266724-56266743 Msa0689260:three_prime_UTR 30.0%
TGGAGAATATAGATCGACAT+GGG + chr4_4:56257084-56257103 Msa0689260:intron 35.0%
TAGCTTGACAAACTGTTGTT+TGG - chr4_4:56257123-56257142 None:intergenic 35.0%
!!! TTTTCTAGGGCAATGATACT+AGG - chr4_4:56257171-56257190 None:intergenic 35.0%
AGTATCATTGCCCTAGAAAA+TGG + chr4_4:56257171-56257190 Msa0689260:intron 35.0%
! CATCTTTTAGTGGTTAGGTT+GGG - chr4_4:56257215-56257234 None:intergenic 35.0%
! TCATCTTTTAGTGGTTAGGT+TGG - chr4_4:56257216-56257235 None:intergenic 35.0%
ACAATAGACAAACAAACGAC+TGG + chr4_4:56257261-56257280 Msa0689260:intron 35.0%
TTTGGCTATCATCAATTCGA+TGG - chr4_4:56257336-56257355 None:intergenic 35.0%
GTTGGGTTTACACTATTTGT+GGG - chr4_4:56257731-56257750 None:intergenic 35.0%
AGTTGGGTTTACACTATTTG+TGG - chr4_4:56257732-56257751 None:intergenic 35.0%
CGAAGCTTCTTTCTTTAGTT+GGG - chr4_4:56257748-56257767 None:intergenic 35.0%
TCGAAGCTTCTTTCTTTAGT+TGG - chr4_4:56257749-56257768 None:intergenic 35.0%
! GTATTATTTGAAACTCCTGC+AGG + chr4_4:56257929-56257948 Msa0689260:CDS 35.0%
! AGATTAAGGGAAGTATGAGT+GGG - chr4_4:56258154-56258173 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + chr4_4:56258280-56258299 Msa0689260:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+AGG + chr4_4:56258317-56258336 Msa0689260:CDS 35.0%
GAAACTGGGGAATAACATTA+AGG + chr4_4:56258397-56258416 Msa0689260:CDS 35.0%
TGATCTAGCTGTTCAAGATA+TGG + chr4_4:56258598-56258617 Msa0689260:intron 35.0%
CTTGTATATTGATAGGCTAC+AGG - chr4_4:56258645-56258664 None:intergenic 35.0%
GTCAGGAAAAAGTTGTTATC+CGG - chr4_4:56258813-56258832 None:intergenic 35.0%
!! GCCTGATACTTTTGATTCTT+CGG + chr4_4:56258954-56258973 Msa0689260:intron 35.0%
!! TCCGAAGAATCAAAAGTATC+AGG - chr4_4:56258958-56258977 None:intergenic 35.0%
TGAATGATTTCGCTAAGATC+AGG - chr4_4:56259118-56259137 None:intergenic 35.0%
TGATCTTAGCGAAATCATTC+AGG + chr4_4:56259117-56259136 Msa0689260:CDS 35.0%
!! TGACCAGGTTTTATCTCTTT+CGG + chr4_4:56259503-56259522 Msa0689260:CDS 35.0%
ATTCCGAAAGAGATAAAACC+TGG - chr4_4:56259509-56259528 None:intergenic 35.0%
TGATTATCTCAAGAGTAGGA+TGG + chr4_4:56259545-56259564 Msa0689260:CDS 35.0%
TGAATTATGTTGAGTCGGTT+GGG + chr4_4:56259796-56259815 Msa0689260:intron 35.0%
GGATAGATAACTGTTCCTAT+AGG + chr4_4:56259817-56259836 Msa0689260:intron 35.0%
ATTCCACACATGGATATTCT+TGG - chr4_4:56260007-56260026 None:intergenic 35.0%
! TGGACAAGCATGCTTTTAAT+TGG + chr4_4:56260154-56260173 Msa0689260:intron 35.0%
!!! AAAGTTTTTTGTGGTGCTCT+TGG + chr4_4:56260180-56260199 Msa0689260:intron 35.0%
!!! AAGTTTTTTGTGGTGCTCTT+GGG + chr4_4:56260181-56260200 Msa0689260:intron 35.0%
GCTCAGAAATTACACAATGA+TGG - chr4_4:56260276-56260295 None:intergenic 35.0%
GGGATGTATTCTCAACAAAT+AGG - chr4_4:56260906-56260925 None:intergenic 35.0%
ATTATTCCATGTTGCCATGT+TGG - chr4_4:56261005-56261024 None:intergenic 35.0%
CTATAAGCAGTGACCTATAA+TGG - chr4_4:56261137-56261156 None:intergenic 35.0%
TTTGATTGGACTGTAGAAGA+AGG + chr4_4:56261243-56261262 Msa0689260:intron 35.0%
!!! GTTTTGTTTTGGTAAGCTCT+TGG - chr4_4:56261285-56261304 None:intergenic 35.0%
! TGTTTTACCCCATGTAATGT+AGG + chr4_4:56261906-56261925 Msa0689260:intron 35.0%
ATAGGGACTAAAAATGCTGA+TGG - chr4_4:56262341-56262360 None:intergenic 35.0%
TTAGGGACCAAAAAAGTTGA+CGG - chr4_4:56262436-56262455 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr4_4:56262444-56262463 Msa0689260:intron 35.0%
TGCTTAAGGAAAATGTCACA+AGG + chr4_4:56262458-56262477 Msa0689260:intron 35.0%
! GGGTTTACACTATTTCTCTA+GGG - chr4_4:56262639-56262658 None:intergenic 35.0%
! AGGGTTTACACTATTTCTCT+AGG - chr4_4:56262640-56262659 None:intergenic 35.0%
! CTTCATTGAGCACTTTGAAA+AGG - chr4_4:56262903-56262922 None:intergenic 35.0%
!! CTTTTCAAAGTGCTCAATGA+AGG + chr4_4:56262901-56262920 Msa0689260:CDS 35.0%
ATGATGTCTGATTCATGACT+TGG + chr4_4:56263041-56263060 Msa0689260:intron 35.0%
!! TTAAGGGTAATAAAGCACTG+TGG - chr4_4:56263460-56263479 None:intergenic 35.0%
! ACACTTTCGATTAGAAGTGT+CGG + chr4_4:56263639-56263658 Msa0689260:intron 35.0%
ATCAGATCATGAAAGAACGT+AGG - chr4_4:56263716-56263735 None:intergenic 35.0%
CTTTACACAGGATTTATGGA+AGG + chr4_4:56263762-56263781 Msa0689260:intron 35.0%
ATCAGTAAACACGCAATTGA+AGG - chr4_4:56263849-56263868 None:intergenic 35.0%
AATTGCGTGTTTACTGATGT+TGG + chr4_4:56263851-56263870 Msa0689260:intron 35.0%
ACCTAATTATGCATCACTTG+GGG - chr4_4:56263962-56263981 None:intergenic 35.0%
CACCTAATTATGCATCACTT+GGG - chr4_4:56263963-56263982 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + chr4_4:56258280-56258299 Msa0689260:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+GGG + chr4_4:56258317-56258336 Msa0689260:CDS 35.0%
AGGTATTCGATTTCAGTTGA+CGG + chr4_4:56264290-56264309 Msa0689260:CDS 35.0%
TCTGGTACATTCTGATTCTT+TGG + chr4_4:56264502-56264521 Msa0689260:intron 35.0%
!! GTAAAAAGCATCTTAAGGTC+AGG - chr4_4:56264541-56264560 None:intergenic 35.0%
!! ACCTTAAGATGCTTTTTACC+AGG + chr4_4:56264542-56264561 Msa0689260:intron 35.0%
!! ACCTGGTAAAAAGCATCTTA+AGG - chr4_4:56264546-56264565 None:intergenic 35.0%
AGTTGAATACATATGCCATG+AGG + chr4_4:56264616-56264635 Msa0689260:CDS 35.0%
GTTGAATACATATGCCATGA+GGG + chr4_4:56264617-56264636 Msa0689260:CDS 35.0%
AGGATAATATCCAATACGCA+AGG + chr4_4:56264688-56264707 Msa0689260:CDS 35.0%
GAGTAAAACAATTGGCAACA+CGG - chr4_4:56264789-56264808 None:intergenic 35.0%
! TGTAGGTAAAGAAAGAGTAC+GGG - chr4_4:56264897-56264916 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr4_4:56265077-56265096 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr4_4:56265089-56265108 None:intergenic 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + chr4_4:56265096-56265115 Msa0689260:intron 35.0%
!! ATATCTATGGGTACTGAAGT+TGG + chr4_4:56265288-56265307 Msa0689260:CDS 35.0%
!! TGAAGTTGGTGAACTAGATT+TGG + chr4_4:56265302-56265321 Msa0689260:CDS 35.0%
ATTTATTAAGCTACCCCCAT+GGG - chr4_4:56265472-56265491 None:intergenic 35.0%
AAACATGCTACTCCCAAATA+TGG + chr4_4:56265564-56265583 Msa0689260:CDS 35.0%
! GAAATTTTGCCCTTGAACTT+TGG - chr4_4:56265627-56265646 None:intergenic 35.0%
AGTTCAAGGGCAAAATTTCT+CGG + chr4_4:56265628-56265647 Msa0689260:CDS 35.0%
TCAAAGTACAACAAGTACCT+TGG - chr4_4:56265739-56265758 None:intergenic 35.0%
! CTTTGAGTTATATGTCCCTA+TGG + chr4_4:56265753-56265772 Msa0689260:intron 35.0%
AATCTCGAAGGCAAAGAATT+AGG + chr4_4:56265834-56265853 Msa0689260:CDS 35.0%
!! CAAAGAATTAGGTCGATTTG+CGG + chr4_4:56265845-56265864 Msa0689260:CDS 35.0%
!! AAAGAATTAGGTCGATTTGC+GGG + chr4_4:56265846-56265865 Msa0689260:CDS 35.0%
CTTATCATATGCCTCTATCT+TGG - chr4_4:56265889-56265908 None:intergenic 35.0%
! CAAGATAGAGGCATATGATA+AGG + chr4_4:56265887-56265906 Msa0689260:CDS 35.0%
AAAGGACAAAAAGGAAGAAG+AGG + chr4_4:56266143-56266162 Msa0689260:CDS 35.0%
! TTCTTTTTATCAGCAGCAGA+AGG - chr4_4:56266102-56266121 None:intergenic 35.0%
AAAGGAGAAAAAGGAAGAAG+AGG + chr4_4:56266263-56266282 Msa0689260:CDS 35.0%
CAGGAGAAAAGAAGAAAAAG+AGG + chr4_4:56266418-56266437 Msa0689260:CDS 35.0%
CAAGGTGTAAATAGAGCAAA+GGG - chr4_4:56266763-56266782 None:intergenic 35.0%
TTGCTAACTTAAGATCAGCA+AGG - chr4_4:56266781-56266800 None:intergenic 35.0%
CATGTCGATCTATATTCTCC+AGG - chr4_4:56257085-56257104 None:intergenic 40.0%
CTGGAGAATATAGATCGACA+TGG + chr4_4:56257083-56257102 Msa0689260:intron 40.0%
ATGATACTAGGCGTCTTCTT+AGG - chr4_4:56257159-56257178 None:intergenic 40.0%
! TTCAGATTCGTGGTCTTGAT+AGG - chr4_4:56257300-56257319 None:intergenic 40.0%
CAATTCGATGGCAATCACAA+CGG - chr4_4:56257324-56257343 None:intergenic 40.0%
!!! AGGCTTGTTGGTTGAACTTT+TGG - chr4_4:56257354-56257373 None:intergenic 40.0%
AGATATTTACATGGTGTGGC+AGG - chr4_4:56257431-56257450 None:intergenic 40.0%
! GGACACTACACGTTTTTGAA+TGG + chr4_4:56257538-56257557 Msa0689260:intron 40.0%
AAGAAAGAAGCTTCGACTTC+TGG + chr4_4:56257753-56257772 Msa0689260:intron 40.0%
!!! GCTTTGTTTTCCAGGTTTGT+TGG + chr4_4:56257890-56257909 Msa0689260:intron 40.0%
!!! TGTCACTTTTCCAACAAACC+TGG - chr4_4:56257903-56257922 None:intergenic 40.0%
! CAGATTAAGGGAAGTATGAG+TGG - chr4_4:56258155-56258174 None:intergenic 40.0%
GAAGCTAGGTTCTTGATTGA+TGG + chr4_4:56258302-56258321 Msa0689260:CDS 40.0%
AACGTCTCATTGTCACAATG+AGG - chr4_4:56258362-56258381 None:intergenic 40.0%
CATTAAGGAAAAACTGGGAC+CGG + chr4_4:56258412-56258431 Msa0689260:CDS 40.0%
CAAGTTACTAAGGGACACTT+GGG - chr4_4:56258445-56258464 None:intergenic 40.0%
ACAAGTTACTAAGGGACACT+TGG - chr4_4:56258446-56258465 None:intergenic 40.0%
!! CCGGAGAATCAAAAAGTATC+CGG - chr4_4:56258794-56258813 None:intergenic 40.0%
!! CCGGATACTTTTTGATTCTC+CGG + chr4_4:56258791-56258810 Msa0689260:intron 40.0%
AAGAGTTGAATACATCTGCC+AGG + chr4_4:56258897-56258916 Msa0689260:CDS 40.0%
AGTTGAATGCATATGCCATG+AGG + chr4_4:56259068-56259087 Msa0689260:CDS 40.0%
GTTGAATGCATATGCCATGA+GGG + chr4_4:56259069-56259088 Msa0689260:CDS 40.0%
! CATATTTCAGCTTTTGCCAG+AGG + chr4_4:56259392-56259411 Msa0689260:intron 40.0%
AGAAGCAGCTGTGATATCTA+TGG + chr4_4:56259434-56259453 Msa0689260:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + chr4_4:56259435-56259454 Msa0689260:CDS 40.0%
TTGGCAGATATTAGAGAGCT+AGG + chr4_4:56259480-56259499 Msa0689260:CDS 40.0%
CTCTTTCGGAATATAGAGCT+CGG + chr4_4:56259517-56259536 Msa0689260:CDS 40.0%
!! CTAGGATTGTTTCTGAACCA+AGG + chr4_4:56259727-56259746 Msa0689260:intron 40.0%
CTGAATTATGTTGAGTCGGT+TGG + chr4_4:56259795-56259814 Msa0689260:intron 40.0%
TGGTGATTAGACTTTGAGCA+AGG - chr4_4:56259987-56260006 None:intergenic 40.0%
TCACCAAGAATATCCATGTG+TGG + chr4_4:56260001-56260020 Msa0689260:intron 40.0%
GGAAAATGATATGTATCCCG+AGG + chr4_4:56260053-56260072 Msa0689260:intron 40.0%
ATGATATGTATCCCGAGGAA+TGG + chr4_4:56260058-56260077 Msa0689260:intron 40.0%
TGATATGTATCCCGAGGAAT+GGG + chr4_4:56260059-56260078 Msa0689260:intron 40.0%
ATTATCGCTATCCCATTCCT+CGG - chr4_4:56260073-56260092 None:intergenic 40.0%
ATGCTTGTCCACAAATCATG+GGG - chr4_4:56260145-56260164 None:intergenic 40.0%
CATGCTTGTCCACAAATCAT+GGG - chr4_4:56260146-56260165 None:intergenic 40.0%
TGTGTGTTGGAAGTTGAAAC+TGG + chr4_4:56260387-56260406 Msa0689260:intron 40.0%
GTGTGTTGGAAGTTGAAACT+GGG + chr4_4:56260388-56260407 Msa0689260:intron 40.0%
TGTGTTGGAAGTTGAAACTG+GGG + chr4_4:56260389-56260408 Msa0689260:intron 40.0%
TTCATATAGGGACCGACAAT+AGG + chr4_4:56260629-56260648 Msa0689260:intron 40.0%
AACTTTCCAACATGGCAACA+TGG + chr4_4:56260996-56261015 Msa0689260:intron 40.0%
! GGATTTTGCAGTGATAAGCA+GGG - chr4_4:56261116-56261135 None:intergenic 40.0%
! TGGATTTTGCAGTGATAAGC+AGG - chr4_4:56261117-56261136 None:intergenic 40.0%
AAAGTTTACTTCCACCATGG+TGG - chr4_4:56261185-56261204 None:intergenic 40.0%
TTGTATCCACCGTGAAAACT+TGG + chr4_4:56261484-56261503 Msa0689260:intron 40.0%
! CACTTCATGCCAAGTTTTCA+CGG - chr4_4:56261496-56261515 None:intergenic 40.0%
AACTTGGCATGAAGTGTGAA+AGG + chr4_4:56261500-56261519 Msa0689260:intron 40.0%
!! AGTATTGACCTTGTGGATTG+CGG - chr4_4:56262733-56262752 None:intergenic 40.0%
!! AGCGAAAAGTATTGACCTTG+TGG - chr4_4:56262740-56262759 None:intergenic 40.0%
!! AGGAAAGCTTTCTGAAGTTC+AGG + chr4_4:56262921-56262940 Msa0689260:CDS 40.0%
TCTAAACTTCTCTGCGAACT+TGG + chr4_4:56262966-56262985 Msa0689260:intron 40.0%
AAAATGTTAACCTGTTCCCC+CGG + chr4_4:56263211-56263230 Msa0689260:intron 40.0%
! TGTAATCACATGTGTCACTC+TGG + chr4_4:56263578-56263597 Msa0689260:intron 40.0%
ACCCCAAGTGATGCATAATT+AGG + chr4_4:56263958-56263977 Msa0689260:intron 40.0%
CCACCTAATTATGCATCACT+TGG - chr4_4:56263964-56263983 None:intergenic 40.0%
CCAAGTGATGCATAATTAGG+TGG + chr4_4:56263961-56263980 Msa0689260:intron 40.0%
!! GCAGCTAGTTTGTTGATTGA+TGG + chr4_4:56264034-56264053 Msa0689260:CDS 40.0%
GATTGATGGAAAAGCTAGCA+AGG + chr4_4:56258316-56258335 Msa0689260:CDS 40.0%
GAAGTTGGGGACTATCATTA+AGG + chr4_4:56264129-56264148 Msa0689260:CDS 40.0%
TGTTCACAGCAATGCTGTTA+TGG + chr4_4:56264257-56264276 Msa0689260:CDS 40.0%
ATAGACTATGAGACAAACCC+AGG - chr4_4:56264359-56264378 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr4_4:56265148-56265167 None:intergenic 40.0%
AGAAGCAGCTGTGATATCTA+TGG + chr4_4:56259434-56259453 Msa0689260:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + chr4_4:56259435-56259454 Msa0689260:CDS 40.0%
CCAACCATAGCAGTCAAATT+GGG - chr4_4:56265423-56265442 None:intergenic 40.0%
CCAATTTGACTGCTATGGTT+GGG + chr4_4:56265421-56265440 Msa0689260:CDS 40.0%
CAATTTGACTGCTATGGTTG+GGG + chr4_4:56265422-56265441 Msa0689260:CDS 40.0%
GATTTATTAAGCTACCCCCA+TGG - chr4_4:56265473-56265492 None:intergenic 40.0%
ATAAATCTTGCAAAGCAGCC+TGG + chr4_4:56265486-56265505 Msa0689260:CDS 40.0%
ACTTTGCAAGCTGATGTAGA+TGG + chr4_4:56266291-56266310 Msa0689260:CDS 40.0%
AGAGACACAGATTTGAATGC+AGG + chr4_4:56266399-56266418 Msa0689260:CDS 40.0%
! AAGAAAAATGCCGACTAGAG+CGG + chr4_4:56266504-56266523 Msa0689260:exon 40.0%
TTGGCATCTGCTATTCAATC+TGG + chr4_4:56266542-56266561 Msa0689260:three_prime_UTR 40.0%
CTGCTATTCAATCTGGTGAA+TGG + chr4_4:56266549-56266568 Msa0689260:three_prime_UTR 40.0%
GAACAACTACTGAGCTAAAG+AGG - chr4_4:56266591-56266610 None:intergenic 40.0%
GCAAGGTGTAAATAGAGCAA+AGG - chr4_4:56266764-56266783 None:intergenic 40.0%
TCACAACGGTTTCAGATTCG+TGG - chr4_4:56257310-56257329 None:intergenic 45.0%
!! TCTCTCTTGTTTCTACCGTG+CGG + chr4_4:56257783-56257802 Msa0689260:intron 45.0%
ATATGTTATCGTGTGCCGCA+CGG - chr4_4:56257801-56257820 None:intergenic 45.0%
TTGAAAAGGGCAAAACCTGC+AGG - chr4_4:56257947-56257966 None:intergenic 45.0%
CTTTATACAGGACTCATGGG+AGG + chr4_4:56258080-56258099 Msa0689260:intron 45.0%
TACTGCAGACTCTGCAAGAA+AGG + chr4_4:56258110-56258129 Msa0689260:CDS 45.0%
CATTGTCACAATGAGGAAGC+AGG - chr4_4:56258355-56258374 None:intergenic 45.0%
ATGTGTAGCTGATGCGAAAC+TGG + chr4_4:56258382-56258401 Msa0689260:CDS 45.0%
TGTGTAGCTGATGCGAAACT+GGG + chr4_4:56258383-56258402 Msa0689260:CDS 45.0%
AGATATGGCTCCGATGAAGT+TGG + chr4_4:56258613-56258632 Msa0689260:intron 45.0%
GATATGGCTCCGATGAAGTT+GGG + chr4_4:56258614-56258633 Msa0689260:intron 45.0%
CAGGACAAACCCAACTTCAT+CGG - chr4_4:56258626-56258645 None:intergenic 45.0%
GTTGAAGCATAGTGCAGACT+AGG + chr4_4:56258664-56258683 Msa0689260:intron 45.0%
AATTAGGCGGACACCTTGAT+CGG + chr4_4:56258842-56258861 Msa0689260:intron 45.0%
CGTCGAGTAAACCAATAGTC+TGG - chr4_4:56258868-56258887 None:intergenic 45.0%
GAATACATCTGCCAGGCTAT+TGG + chr4_4:56258904-56258923 Msa0689260:CDS 45.0%
CAATACACAGACCAATAGCC+TGG - chr4_4:56258918-56258937 None:intergenic 45.0%
CGTCAAGTAAACCAATAGCC+TGG - chr4_4:56259036-56259055 None:intergenic 45.0%
! AGCTTTTGCCAGAGGAAGTT+GGG + chr4_4:56259400-56259419 Msa0689260:intron 45.0%
TATTAGAGAGCTAGGTGACC+AGG + chr4_4:56259488-56259507 Msa0689260:CDS 45.0%
ACCATTGCACCCAATTTGAC+TGG + chr4_4:56259570-56259589 Msa0689260:CDS 45.0%
CCATTGCACCCAATTTGACT+GGG + chr4_4:56259571-56259590 Msa0689260:CDS 45.0%
CATTGCACCCAATTTGACTG+GGG + chr4_4:56259572-56259591 Msa0689260:CDS 45.0%
ACAAGCTCCCCAGTCAAATT+GGG - chr4_4:56259582-56259601 None:intergenic 45.0%
AACAAGCTCCCCAGTCAAAT+TGG - chr4_4:56259583-56259602 None:intergenic 45.0%
AATTTGACTGGGGAGCTTGT+TGG + chr4_4:56259582-56259601 Msa0689260:CDS 45.0%
!! GATTGTTTCTGAACCAAGGC+TGG + chr4_4:56259731-56259750 Msa0689260:CDS 45.0%
CCAGCTAACTAACACCCTAT+AGG - chr4_4:56259835-56259854 None:intergenic 45.0%
! CCTATAGGGTGTTAGTTAGC+TGG + chr4_4:56259832-56259851 Msa0689260:intron 45.0%
TTATCGCTATCCCATTCCTC+GGG - chr4_4:56260072-56260091 None:intergenic 45.0%
!! GGGGGTGATGGATGAAATAT+AGG - chr4_4:56260126-56260145 None:intergenic 45.0%
TGCTTGTCCACAAATCATGG+GGG - chr4_4:56260144-56260163 None:intergenic 45.0%
GCATGCTTGTCCACAAATCA+TGG - chr4_4:56260147-56260166 None:intergenic 45.0%
! GGCACAGAAAGTATGTGTGT+TGG + chr4_4:56260374-56260393 Msa0689260:intron 45.0%
CTCATCGGAACTTTCCAACA+TGG + chr4_4:56260988-56261007 Msa0689260:intron 45.0%
GGTGATCACAATATGCTTGG+TGG - chr4_4:56261095-56261114 None:intergenic 45.0%
CAGGGTGATCACAATATGCT+TGG - chr4_4:56261098-56261117 None:intergenic 45.0%
! GATAGTGGTGCTTATTGTGG+AGG - chr4_4:56261163-56261182 None:intergenic 45.0%
! GTGGATAGTGGTGCTTATTG+TGG - chr4_4:56261166-56261185 None:intergenic 45.0%
ATAAGCACCACTATCCACCA+TGG + chr4_4:56261168-56261187 Msa0689260:intron 45.0%
! TTCATGCCAAGTTTTCACGG+TGG - chr4_4:56261493-56261512 None:intergenic 45.0%
AAATGTTAACCTGTTCCCCC+GGG + chr4_4:56263212-56263231 Msa0689260:intron 45.0%
TGTCGCACAATGACACATGT+CGG + chr4_4:56263607-56263626 Msa0689260:intron 45.0%
! ATGGAAGGAGTTTTCCAGTG+CGG + chr4_4:56263777-56263796 Msa0689260:CDS 45.0%
CATTATCACAATGAGCACGC+AGG - chr4_4:56264087-56264106 None:intergenic 45.0%
AGCTGTAGCTGATACGAAGT+TGG + chr4_4:56264114-56264133 Msa0689260:CDS 45.0%
GCTGTAGCTGATACGAAGTT+GGG + chr4_4:56264115-56264134 Msa0689260:CDS 45.0%
CTGTAGCTGATACGAAGTTG+GGG + chr4_4:56264116-56264135 Msa0689260:CDS 45.0%
CAGTTGACGGAACTCATAAC+TGG + chr4_4:56264303-56264322 Msa0689260:CDS 45.0%
GTTGAAGTTCAGTGCAGACA+AGG + chr4_4:56264389-56264408 Msa0689260:CDS 45.0%
ATACCATTCTCGAACCCTCA+TGG - chr4_4:56264634-56264653 None:intergenic 45.0%
ATGAGGGTTCGAGAATGGTA+TGG + chr4_4:56264633-56264652 Msa0689260:CDS 45.0%
ACTTGACAGACCTTGCGTAT+TGG - chr4_4:56264701-56264720 None:intergenic 45.0%
!! GCAAGGTCTGTCAAGTTGAT+GGG + chr4_4:56264705-56264724 Msa0689260:CDS 45.0%
TGCAAAGCTTGATTTCTCCG+AGG + chr4_4:56264743-56264762 Msa0689260:CDS 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr4_4:56265154-56265173 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr4_4:56265164-56265183 None:intergenic 45.0%
AGCAGTCAAATTGGGTGCAA+TGG - chr4_4:56265415-56265434 None:intergenic 45.0%
TGCACCCAATTTGACTGCTA+TGG + chr4_4:56265416-56265435 Msa0689260:CDS 45.0%
CCCAATTTGACTGCTATGGT+TGG + chr4_4:56265420-56265439 Msa0689260:CDS 45.0%
CCCAACCATAGCAGTCAAAT+TGG - chr4_4:56265424-56265443 None:intergenic 45.0%
AGCTGAGAAGGCTCTCTTTA+GGG + chr4_4:56265530-56265549 Msa0689260:CDS 45.0%
TCAAGCAGCTCCAAAGTTCA+AGG + chr4_4:56265614-56265633 Msa0689260:CDS 45.0%
CAAGCAGCTCCAAAGTTCAA+GGG + chr4_4:56265615-56265634 Msa0689260:CDS 45.0%
!! CAAAGACAGCATTGGCTATC+AGG + chr4_4:56265661-56265680 Msa0689260:CDS 45.0%
AGATGGTGAAGACAACACCA+TGG + chr4_4:56265698-56265717 Msa0689260:CDS 45.0%
GATGGTGAAGACAACACCAT+GGG + chr4_4:56265699-56265718 Msa0689260:CDS 45.0%
TGAAGACAACACCATGGGAT+TGG + chr4_4:56265704-56265723 Msa0689260:CDS 45.0%
GATTTGCGGGTTCTGCTAAA+GGG + chr4_4:56265859-56265878 Msa0689260:CDS 45.0%
TAAAGGGAAGCCCAAGATAG+AGG + chr4_4:56265875-56265894 Msa0689260:CDS 45.0%
AAGGATAGAAAGAAGGGAGC+TGG + chr4_4:56265906-56265925 Msa0689260:CDS 45.0%
AGGACTGATAACTCCTGCTA+AGG + chr4_4:56265929-56265948 Msa0689260:CDS 45.0%
GGAACCTACTGAGAATACTG+AGG + chr4_4:56266368-56266387 Msa0689260:CDS 45.0%
ACCTACTGAGAATACTGAGG+TGG + chr4_4:56266371-56266390 Msa0689260:CDS 45.0%
TCCACCTCAGTATTCTCAGT+AGG - chr4_4:56266375-56266394 None:intergenic 45.0%
ATGTTCCATTCCGCTCTAGT+CGG - chr4_4:56266517-56266536 None:intergenic 45.0%
TTAATGGGGTAGGTCGTCTT+AGG + chr4_4:56266674-56266693 Msa0689260:three_prime_UTR 45.0%
TAATGGGGTAGGTCGTCTTA+GGG + chr4_4:56266675-56266694 Msa0689260:three_prime_UTR 45.0%
!!! AATTTTTTTAAAATTTTTGT+AGG - chr4_4:56257603-56257622 None:intergenic 5.0%
!!! ATAAGTTTATTTATTTTTTA+AGG - chr4_4:56257674-56257693 None:intergenic 5.0%
!!! ATTTTTTCTTTTTTTAATTT+AGG + chr4_4:56261621-56261640 Msa0689260:intron 5.0%
TACCTCTCTTGAGCAGCTAC+CGG - chr4_4:56257059-56257078 None:intergenic 50.0%
TGCTCAAGAGAGGTAGTTCC+TGG + chr4_4:56257064-56257083 Msa0689260:intron 50.0%
!! GCAGTGGAGGCCATTTTCTA+GGG - chr4_4:56257184-56257203 None:intergenic 50.0%
!! GTGGTTAGGTTGGGAGTTTC+TGG - chr4_4:56257206-56257225 None:intergenic 50.0%
AGTGTGGAGAGAAGGCTTGT+TGG - chr4_4:56257366-56257385 None:intergenic 50.0%
GCCTTCTCTCCACACTAACA+AGG + chr4_4:56257370-56257389 Msa0689260:intron 50.0%
! GCCTTGTTAGTGTGGAGAGA+AGG - chr4_4:56257374-56257393 None:intergenic 50.0%
! AGGTGTGAGATCTAAGGTGG+AGG - chr4_4:56257400-56257419 None:intergenic 50.0%
TACATGGTGTGGCAGGATCT+CGG - chr4_4:56257424-56257443 None:intergenic 50.0%
CAGAAGCTACAGAGGAAGCT+AGG + chr4_4:56258288-56258307 Msa0689260:CDS 50.0%
GTGTAGCTGATGCGAAACTG+GGG + chr4_4:56258384-56258403 Msa0689260:CDS 50.0%
GCTGTTATGGAGCTAATGCG+AGG + chr4_4:56258545-56258564 Msa0689260:CDS 50.0%
ACCTTGATCGGCCAGACTAT+TGG + chr4_4:56258854-56258873 Msa0689260:CDS 50.0%
ACCAATAGTCTGGCCGATCA+AGG - chr4_4:56258858-56258877 None:intergenic 50.0%
GCCATGAGGGTTCGAGAATA+TGG + chr4_4:56259082-56259101 Msa0689260:CDS 50.0%
GCCATATTCTCGAACCCTCA+TGG - chr4_4:56259086-56259105 None:intergenic 50.0%
TGAGGGTTCGAGAATATGGC+TGG + chr4_4:56259086-56259105 Msa0689260:CDS 50.0%
TGCAGAGCTCGATTTCTCTG+AGG + chr4_4:56259192-56259211 Msa0689260:CDS 50.0%
! CAGCTTTTGCCAGAGGAAGT+TGG + chr4_4:56259399-56259418 Msa0689260:intron 50.0%
! GCTTTTGCCAGAGGAAGTTG+GGG + chr4_4:56259401-56259420 Msa0689260:intron 50.0%
CCCAGTCAAATTGGGTGCAA+TGG - chr4_4:56259574-56259593 None:intergenic 50.0%
GCTGGAGATGTGTGGTACAA+TGG + chr4_4:56259749-56259768 Msa0689260:CDS 50.0%
TCCATCACCCCCATGATTTG+TGG + chr4_4:56260134-56260153 Msa0689260:intron 50.0%
TCCACAAATCATGGGGGTGA+TGG - chr4_4:56260138-56260157 None:intergenic 50.0%
AGTGGTGCTTATTGTGGAGG+AGG - chr4_4:56261160-56261179 None:intergenic 50.0%
!! ACTTCCACCATGGTGGATAG+TGG - chr4_4:56261178-56261197 None:intergenic 50.0%
GGTAAGCTCTTGGGTAAGTC+TGG - chr4_4:56261275-56261294 None:intergenic 50.0%
! GGTACTGTTTGAAACCCCTG+CGG + chr4_4:56262870-56262889 Msa0689260:CDS 50.0%
! GTACTGTTTGAAACCCCTGC+GGG + chr4_4:56262871-56262890 Msa0689260:CDS 50.0%
AATGTTAACCTGTTCCCCCG+GGG + chr4_4:56263213-56263232 Msa0689260:intron 50.0%
! CACATGTGTCACTCTGGTGT+TGG + chr4_4:56263584-56263603 Msa0689260:intron 50.0%
AATGACACATGTCGGACGCT+GGG + chr4_4:56263615-56263634 Msa0689260:intron 50.0%
GCTGTTATGGAGCTAATGCG+AGG + chr4_4:56258545-56258564 Msa0689260:CDS 50.0%
TGAGACAAACCCAGGCTCAT+CGG - chr4_4:56264351-56264370 None:intergenic 50.0%
ACCATGATCGTCCAGGCTAT+TGG + chr4_4:56264570-56264589 Msa0689260:CDS 50.0%
ACCAATAGCCTGGACGATCA+TGG - chr4_4:56264574-56264593 None:intergenic 50.0%
CGTCGAGTAAACCAATAGCC+TGG - chr4_4:56264584-56264603 None:intergenic 50.0%
ATGCCATGAGGGTTCGAGAA+TGG + chr4_4:56259080-56259099 Msa0689260:CDS 50.0%
!! CGCAAGGTCTGTCAAGTTGA+TGG + chr4_4:56264704-56264723 Msa0689260:CDS 50.0%
! GAAAGAGTACGGGCTTTGTG+TGG - chr4_4:56264887-56264906 None:intergenic 50.0%
! CAAGCCTTATCCCACCAAGT+GGG + chr4_4:56265007-56265026 Msa0689260:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + chr4_4:56265008-56265027 Msa0689260:intron 50.0%
AGAATCTGCACGGTACTACC+AGG - chr4_4:56265507-56265526 None:intergenic 50.0%
GGTAGTACCGTGCAGATTCT+TGG + chr4_4:56265507-56265526 Msa0689260:CDS 50.0%
CTCAGCTCCAAGAATCTGCA+CGG - chr4_4:56265517-56265536 None:intergenic 50.0%
GCAGATTCTTGGAGCTGAGA+AGG + chr4_4:56265518-56265537 Msa0689260:CDS 50.0%
GAGCTGAGAAGGCTCTCTTT+AGG + chr4_4:56265529-56265548 Msa0689260:CDS 50.0%
! GCTTGCTGCAAAGACAGCAT+TGG + chr4_4:56265653-56265672 Msa0689260:CDS 50.0%
GCTATCAGGTGTGATGCACT+TGG + chr4_4:56265675-56265694 Msa0689260:CDS 50.0%
AGGTGTGATGCACTTGGAGA+TGG + chr4_4:56265681-56265700 Msa0689260:CDS 50.0%
CGATTTGCGGGTTCTGCTAA+AGG + chr4_4:56265858-56265877 Msa0689260:CDS 50.0%
GATAGAAAGAAGGGAGCTGG+AGG + chr4_4:56265909-56265928 Msa0689260:CDS 50.0%
AGCTGATGTAGATGGTGACC+AGG + chr4_4:56266299-56266318 Msa0689260:CDS 50.0%
!! CAACTTCATGTTCTGGCTCC+TGG - chr4_4:56266320-56266339 None:intergenic 50.0%
GGCATATCAGCAGCATCTTC+AGG - chr4_4:56266459-56266478 None:intergenic 50.0%
! AAATGCCGACTAGAGCGGAA+TGG + chr4_4:56266509-56266528 Msa0689260:exon 50.0%
GCGGAATGGAACATGCAGAT+TGG + chr4_4:56266523-56266542 Msa0689260:three_prime_UTR 50.0%
TCTCTTGAGCAGCTACCGGA+GGG - chr4_4:56257055-56257074 None:intergenic 55.0%
!! GGCAGTGGAGGCCATTTTCT+AGG - chr4_4:56257185-56257204 None:intergenic 55.0%
!! TTGGGAGTTTCTGGCAGTGG+AGG - chr4_4:56257197-56257216 None:intergenic 55.0%
!! AGGTTGGGAGTTTCTGGCAG+TGG - chr4_4:56257200-56257219 None:intergenic 55.0%
!! GGAGGCAAGCCTTGTTAGTG+TGG - chr4_4:56257382-56257401 None:intergenic 55.0%
GGCAGGTGTGAGATCTAAGG+TGG - chr4_4:56257403-56257422 None:intergenic 55.0%
CTCGGCAGGTGTGAGATCTA+AGG - chr4_4:56257406-56257425 None:intergenic 55.0%
ACCTTGCTCGTCCAGGCTAT+TGG + chr4_4:56259022-56259041 Msa0689260:CDS 55.0%
ACCAATAGCCTGGACGAGCA+AGG - chr4_4:56259026-56259045 None:intergenic 55.0%
TGCAAGGGCAGTCAAGCTGA+TGG + chr4_4:56259153-56259172 Msa0689260:CDS 55.0%
AGTCAAGTTCGTGAGCAGCG+AGG - chr4_4:56259614-56259633 None:intergenic 55.0%
GAACCAAGGCTGGAGATGTG+TGG + chr4_4:56259741-56259760 Msa0689260:CDS 55.0%
GTACCACACATCTCCAGCCT+TGG - chr4_4:56259747-56259766 None:intergenic 55.0%
AGCACCACTATCCACCATGG+TGG + chr4_4:56261171-56261190 Msa0689260:intron 55.0%
TGAAAAGGGCGAAACCCGCA+GGG - chr4_4:56262888-56262907 None:intergenic 55.0%
TTGAAAAGGGCGAAACCCGC+AGG - chr4_4:56262889-56262908 None:intergenic 55.0%
TGCTTCCTTAACCAGTGCCC+CGG - chr4_4:56263233-56263252 None:intergenic 55.0%
CAATGACACATGTCGGACGC+TGG + chr4_4:56263614-56263633 Msa0689260:intron 55.0%
CTTTCTTGCAGCATCCGCAC+TGG - chr4_4:56263794-56263813 None:intergenic 55.0%
CAGTGCGGATGCTGCAAGAA+AGG + chr4_4:56263792-56263811 Msa0689260:CDS 55.0%
TGGCCTCGCTGTTCAAGACA+TGG + chr4_4:56264323-56264342 Msa0689260:CDS 55.0%
GAGCCATGTCTTGAACAGCG+AGG - chr4_4:56264329-56264348 None:intergenic 55.0%
! GGACGATCATGGTGTCAACC+TGG - chr4_4:56264563-56264582 None:intergenic 55.0%
GGTTGACACCATGATCGTCC+AGG + chr4_4:56264563-56264582 Msa0689260:intron 55.0%
GGGTTCGAGAATGGTATGGC+TGG + chr4_4:56264637-56264656 Msa0689260:CDS 55.0%
CTTGGTGGGATAAGGCTTGG+TGG - chr4_4:56265006-56265025 None:intergenic 55.0%
! CCACTTGGTGGGATAAGGCT+TGG - chr4_4:56265009-56265028 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG + chr4_4:56265006-56265025 Msa0689260:intron 55.0%
CTTATCCCACCAAGTGGGGT+CGG + chr4_4:56265012-56265031 Msa0689260:intron 55.0%
GCTATGGTTGGGGAGCTTGT+TGG + chr4_4:56265432-56265451 Msa0689260:CDS 55.0%
GGCTCTGTTCTCCAATCCCA+TGG - chr4_4:56265718-56265737 None:intergenic 55.0%
GGGATTGGAGAACAGAGCCA+AGG + chr4_4:56265719-56265738 Msa0689260:CDS 55.0%
TGCAGCTTGAAGCGCGATTG+AGG + chr4_4:56265811-56265830 Msa0689260:intron 55.0%
GCGCGATTGAGGAATCTCGA+AGG + chr4_4:56265822-56265841 Msa0689260:CDS 55.0%
AGCAGCATCTTCAGGCTCTG+AGG - chr4_4:56266451-56266470 None:intergenic 55.0%
CTCTTGAGCAGCTACCGGAG+GGG - chr4_4:56257054-56257073 None:intergenic 60.0%
CTCTCTTGAGCAGCTACCGG+AGG - chr4_4:56257056-56257075 None:intergenic 60.0%
CTCCGGTAGCTGCTCAAGAG+AGG + chr4_4:56257054-56257073 Msa0689260:CDS 60.0%
AACGCTGCCCCAACTTCCTC+TGG - chr4_4:56259411-56259430 None:intergenic 60.0%
GATTGCGGTGTGCAGCAGAG+CGG - chr4_4:56262718-56262737 None:intergenic 60.0%
GCTGCACACCGCAATCCACA+AGG + chr4_4:56262722-56262741 Msa0689260:CDS 60.0%
GAAAAGGGCGAAACCCGCAG+GGG - chr4_4:56262887-56262906 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG - chr4_4:56263230-56263249 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr4_4:56263231-56263250 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr4_4:56263232-56263251 None:intergenic 60.0%
TTGTGTTAACCGGTGCCCCC+GGG - chr4_4:56263369-56263388 None:intergenic 60.0%
GTTGTGTTAACCGGTGCCCC+CGG - chr4_4:56263370-56263389 None:intergenic 60.0%
AGACATGGCTCCGATGAGCC+TGG + chr4_4:56264338-56264357 Msa0689260:CDS 60.0%
GACATGGCTCCGATGAGCCT+GGG + chr4_4:56264339-56264358 Msa0689260:CDS 60.0%
! CGACCCCACTTGGTGGGATA+AGG - chr4_4:56265014-56265033 None:intergenic 60.0%
TGTAGCCGACCCCACTTGGT+GGG - chr4_4:56265020-56265039 None:intergenic 60.0%
ATGTAGCCGACCCCACTTGG+TGG - chr4_4:56265021-56265040 None:intergenic 60.0%
ACCAAGTGGGGTCGGCTACA+TGG + chr4_4:56265020-56265039 Msa0689260:intron 60.0%
TCCATGTAGCCGACCCCACT+TGG - chr4_4:56265024-56265043 None:intergenic 60.0%
GTGCTCGCCTCATTGCCCAT+GGG + chr4_4:56265454-56265473 Msa0689260:CDS 60.0%
TGCTCGCCTCATTGCCCATG+GGG + chr4_4:56265455-56265474 Msa0689260:CDS 60.0%
AGCTACCCCCATGGGCAATG+AGG - chr4_4:56265464-56265483 None:intergenic 60.0%
TGAGCAGCTACCGGAGGGGA+TGG - chr4_4:56257050-56257069 None:intergenic 65.0%
TGGTGTGGCAGGATCTCGGC+AGG - chr4_4:56257420-56257439 None:intergenic 65.0%
GGGACACTTGGGCAGCACAC+CGG - chr4_4:56258434-56258453 None:intergenic 65.0%
GGTGGACACCTTGCTCGTCC+AGG + chr4_4:56259015-56259034 Msa0689260:intron 65.0%
!! TTCCCCCGGGGCACTGGTTA+AGG + chr4_4:56263225-56263244 Msa0689260:intron 65.0%
TTATCCAGTGCCCCGTGCCC+CGG + chr4_4:56263348-56263367 Msa0689260:intron 65.0%
TGTGTTAACCGGTGCCCCCG+GGG - chr4_4:56263368-56263387 None:intergenic 65.0%
GGTGCTCGCCTCATTGCCCA+TGG + chr4_4:56265453-56265472 Msa0689260:CDS 65.0%
GCTCGCCTCATTGCCCATGG+GGG + chr4_4:56265456-56265475 Msa0689260:CDS 65.0%
AACCTGTTCCCCCGGGGCAC+TGG + chr4_4:56263219-56263238 Msa0689260:intron 70.0%
AACCAGTGCCCCGGGGGAAC+AGG - chr4_4:56263224-56263243 None:intergenic 70.0%
!! GGGGCACGGGGCACTGGATA+AGG - chr4_4:56263349-56263368 None:intergenic 70.0%
TATCCAGTGCCCCGTGCCCC+GGG + chr4_4:56263349-56263368 Msa0689260:intron 70.0%
ATCCAGTGCCCCGTGCCCCG+GGG + chr4_4:56263350-56263369 Msa0689260:intron 75.0%
TAACCGGTGCCCCCGGGGCA+CGG - chr4_4:56263363-56263382 None:intergenic 75.0%
! TCCAGTGCCCCGTGCCCCGG+GGG + chr4_4:56263351-56263370 Msa0689260:intron 80.0%
! AACCGGTGCCCCCGGGGCAC+GGG - chr4_4:56263362-56263381 None:intergenic 80.0%
! ACCGGTGCCCCCGGGGCACG+GGG - chr4_4:56263361-56263380 None:intergenic 85.0%
! GCCCCCGGGGCACGGGGCAC+TGG - chr4_4:56263355-56263374 None:intergenic 90.0%
!! GCCCCGTGCCCCGGGGGCAC+CGG + chr4_4:56263357-56263376 Msa0689260:intron 90.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 56257038 56266882 56257038 ID=Msa0689260;Name=Msa0689260
chr4_4 mRNA 56257038 56266882 56257038 ID=Msa0689260-mRNA-1;Parent=Msa0689260;Name=Msa0689260-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.47|0.44|0.88|0.88|0.88|18|361|971
chr4_4 exon 56257038 56257075 56257038 ID=Msa0689260-mRNA-1:exon:14735;Parent=Msa0689260-mRNA-1
chr4_4 exon 56257904 56258000 56257904 ID=Msa0689260-mRNA-1:exon:14736;Parent=Msa0689260-mRNA-1
chr4_4 exon 56258090 56258131 56258090 ID=Msa0689260-mRNA-1:exon:14737;Parent=Msa0689260-mRNA-1
chr4_4 exon 56258248 56258433 56258248 ID=Msa0689260-mRNA-1:exon:14738;Parent=Msa0689260-mRNA-1
chr4_4 exon 56258521 56258607 56258521 ID=Msa0689260-mRNA-1:exon:14739;Parent=Msa0689260-mRNA-1
chr4_4 exon 56258848 56258925 56258848 ID=Msa0689260-mRNA-1:exon:14740;Parent=Msa0689260-mRNA-1
chr4_4 exon 56259016 56259213 56259016 ID=Msa0689260-mRNA-1:exon:14741;Parent=Msa0689260-mRNA-1
chr4_4 exon 56259402 56259634 56259402 ID=Msa0689260-mRNA-1:exon:14742;Parent=Msa0689260-mRNA-1
chr4_4 exon 56259731 56259770 56259731 ID=Msa0689260-mRNA-1:exon:14743;Parent=Msa0689260-mRNA-1
chr4_4 exon 56262642 56262743 56262642 ID=Msa0689260-mRNA-1:exon:14744;Parent=Msa0689260-mRNA-1
chr4_4 exon 56262844 56262942 56262844 ID=Msa0689260-mRNA-1:exon:14745;Parent=Msa0689260-mRNA-1
chr4_4 exon 56263772 56263813 56263772 ID=Msa0689260-mRNA-1:exon:14746;Parent=Msa0689260-mRNA-1
chr4_4 exon 56263980 56264159 56263980 ID=Msa0689260-mRNA-1:exon:14747;Parent=Msa0689260-mRNA-1
chr4_4 exon 56264246 56264410 56264246 ID=Msa0689260-mRNA-1:exon:14748;Parent=Msa0689260-mRNA-1
chr4_4 exon 56264564 56264764 56264564 ID=Msa0689260-mRNA-1:exon:14749;Parent=Msa0689260-mRNA-1
chr4_4 exon 56265243 56265740 56265243 ID=Msa0689260-mRNA-1:exon:14750;Parent=Msa0689260-mRNA-1
chr4_4 exon 56265816 56265950 56265816 ID=Msa0689260-mRNA-1:exon:14751;Parent=Msa0689260-mRNA-1
chr4_4 exon 56266027 56266882 56266027 ID=Msa0689260-mRNA-1:exon:14752;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56257038 56257075 56257038 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56257904 56258000 56257904 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56258090 56258131 56258090 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56258248 56258433 56258248 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56258521 56258607 56258521 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56258848 56258925 56258848 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56259016 56259213 56259016 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56259402 56259634 56259402 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56259731 56259770 56259731 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56262642 56262743 56262642 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56262844 56262942 56262844 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56263772 56263813 56263772 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56263980 56264159 56263980 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56264246 56264410 56264246 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56264564 56264764 56264564 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56265243 56265740 56265243 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56265816 56265950 56265816 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 CDS 56266027 56266521 56266027 ID=Msa0689260-mRNA-1:cds;Parent=Msa0689260-mRNA-1
chr4_4 three_prime_UTR 56266522 56266882 56266522 ID=Msa0689260-mRNA-1:three_prime_utr;Parent=Msa0689260-mRNA-1
Gene Sequence

>Msa0689260

ATGAGAACTCCATCCCCTCCGGTAGCTGCTCAAGAGAGGTTTGTTGGAAAAGTGACAATGCTTGTATTATTTGAAACTCCTGCAGGTTTTGCCCTTTTCAAATTGTTGGATGAAGTAAAGCTTTCTCAATTTCAGGACTCATGGGAGGACTTTTCTACTGCAGACTCTGCAAGAAAGGTGGTCAAATTGATAGCTTTCTCTAAGTTTGAGAATATATCAGAAGCTACAGAGGAAGCTAGGTTCTTGATTGATGGAAAAGCTAGCAAAGGTCTGCGCAAGTTCCTGCTTCCTCATTGTGACAATGAGACGTTATGTGTAGCTGATGCGAAACTGGGGAATAACATTAAGGAAAAACTGGGACCGAAAATCAAATGTTTTCACAACAATGCTGTTATGGAGCTAATGCGAGGTATTCGATATCAGTTGAGAGAACTTGTAACTGATCTAGCTGCGGACACCTTGATCGGCCAGACTATTGGTTTACTCGACGATCTTGATGAAGAGTTGAATACATCTGCCAGGCTATTGGTGGACACCTTGCTCGTCCAGGCTATTGGTTTACTTGACGATTTTGATAAAGAGTTGAATGCATATGCCATGAGGGTTCGAGAATATGGCTGGCATTTTCCTGATCTTAGCGAAATCATTCAGGATAATATTCAATATGCAAGGGCAGTCAAGCTGATGGTTGATCAAATAAACGCTGCAGAGCTCGATTTCTCTGAGCTTTTGCCAGAGGAAGTTGGGGCAGCGTTGCAAGAAGCAGCTGTGATATCTATGGGAACTGAAATTGGTGAACTAGATTTGGCAGATATTAGAGAGCTAGGTGACCAGGTTTTATCTCTTTCGGAATATAGAGCTCGGCTTTATGATTATCTCAAGAGTAGGATGGACACCATTGCACCCAATTTGACTGGGGAGCTTGTTGGTGCTCGCCTCGCTGCTCACGAACTTGACTTGATTGTTTCTGAACCAAGGCTGGAGATGTGTGGTACAATGAGAAATAGTGTAAACCCTATAAAGAAAAAAGCTTCAACTTCTGCTGCTGCTCGTCTCTCTCGTTTCATCTTCTCCGCTCTGCTGCACACCGCAATCCACAAGGTTTGTTCCAAAAGTGTTAAAATGTTGGTACTGTTTGAAACCCCTGCGGGTTTCGCCCTTTTCAAAGTGCTCAATGAAGGAAAGCTTTCTGAAGTTCAGGATTTATGGAAGGAGTTTTCCAGTGCGGATGCTGCAAGAAAGGTGGTCAAATTGAAAGGCTTCCAGAAGTTTGAGAATATATCAGAAGCTACAGAGGCAGCTAGTTTGTTGATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTGCGTGCTCATTGTGATAATGAGACGTTAGCTGTAGCTGATACGAAGTTGGGGACTATCATTAAGGAAAAACTGAAAATCGACTGTGTTCACAGCAATGCTGTTATGGAGCTAATGCGAGGTATTCGATTTCAGTTGACGGAACTCATAACTGGCCTCGCTGTTCAAGACATGGCTCCGATGAGCCTGGGTTTGTCTCATAGTCTATCAAGATACAAGTTGAAGTTCAGTGCAGACAAGGTTGACACCATGATCGTCCAGGCTATTGGTTTACTCGACGACCTCGATAAAGAGTTGAATACATATGCCATGAGGGTTCGAGAATGGTATGGCTGGCATTTTCCAGAACTTACTAAAATCATTCAGGATAATATCCAATACGCAAGGTCTGTCAAGTTGATGGGTGATCGCATTAATGCTGCAAAGCTTGATTTCTCCGAGATTTTGACAGAGGAAGTTGAAGCAGAGTTGAAAGAAGCAGCTGTGATATCTATGGGTACTGAAGTTGGTGAACTAGATTTGGCAAATATTAGAGAGCTATGTGACCAAGTTTTATCTCTTTCGGAATACAGAGCTCAGCTCTATGATTATCTAAAGAGCAGGATGAACACCATTGCACCCAATTTGACTGCTATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGGGGTAGCTTAATAAATCTTGCAAAGCAGCCTGGTAGTACCGTGCAGATTCTTGGAGCTGAGAAGGCTCTCTTTAGGGCATTGAAGACTAAACATGCTACTCCCAAATATGGTCTTATATATCATGCATCATTGATTGGTCAAGCAGCTCCAAAGTTCAAGGGCAAAATTTCTCGGTCGCTTGCTGCAAAGACAGCATTGGCTATCAGGTGTGATGCACTTGGAGATGGTGAAGACAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAAGCGCGATTGAGGAATCTCGAAGGCAAAGAATTAGGTCGATTTGCGGGTTCTGCTAAAGGGAAGCCCAAGATAGAGGCATATGATAAGGATAGAAAGAAGGGAGCTGGAGGACTGATAACTCCTGCTAAGACATATAATACTGCAGCCGATTCAATTATCGAAAAAAAATCTGATTCTGCAATGGATGAAGATACAGAAGAGCTTTCTGCTGCTGATAAAAAGAAAGCAAAGAAGGAAAAGAAGAAAAAGGACAAAAAGGAAGAAGAGGATACACAAAAATCTAATACTGCAATGGATGAAGATACACAAAAGCCTTCTGCTGCTGATAAAAAGAAAGAAAAGAAGGAAAAGAAAGAAAAGAAGAAAAAGGAGAAAAAGGAAGAAGAGGATACAACTTTGCAAGCTGATGTAGATGGTGACCAGGAGCCAGAACATGAAGTTGTGAAAAAAGAAAAGAAGAAGAAAAGGAAGGAACCTACTGAGAATACTGAGGTGGAGAATAGAGACACAGATTTGAATGCAGGAGAAAAGAAGAAAAAGAGGAAAAAATCCTCAGAGCCTGAAGATGCTGCTGATATGCCAAACAAAAAGAAAGAAAAAAGGAAGAAGAAAAATGCCGACTAG
Protein sequence

>Msa0689260

MRTPSPPVAAQERFVGKVTMLVLFETPAGFALFKLLDEVKLSQFQDSWEDFSTADSARKVVKLIAFSKFENISEATEEARFLIDGKASKGLRKFLLPHCDNETLCVADAKLGNNIKEKLGPKIKCFHNNAVMELMRGIRYQLRELVTDLAADTLIGQTIGLLDDLDEELNTSARLLVDTLLVQAIGLLDDFDKELNAYAMRVREYGWHFPDLSEIIQDNIQYARAVKLMVDQINAAELDFSELLPEEVGAALQEAAVISMGTEIGELDLADIRELGDQVLSLSEYRARLYDYLKSRMDTIAPNLTGELVGARLAAHELDLIVSEPRLEMCGTMRNSVNPIKKKASTSAAARLSRFIFSALLHTAIHKVCSKSVKMLVLFETPAGFALFKVLNEGKLSEVQDLWKEFSSADAARKVVKLKGFQKFENISEATEAASLLIDGKASKGLRKFLRAHCDNETLAVADTKLGTIIKEKLKIDCVHSNAVMELMRGIRFQLTELITGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARSVKLMGDRINAAKLDFSEILTEEVEAELKEAAVISMGTEVGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGEDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNTAADSIIEKKSDSAMDEDTEELSAADKKKAKKEKKKKDKKEEEDTQKSNTAMDEDTQKPSAADKKKEKKEKKEKKKKEKKEEEDTTLQADVDGDQEPEHEVVKKEKKKKRKEPTENTEVENRDTDLNAGEKKKKRKKSSEPEDAADMPNKKKEKRKKKNAD*