AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0989540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0989540 MtrunA17_Chr5g0397481 97.487 597 8 2 351 947 1 590 0.0 1163
Msa0989540 MtrunA17_Chr5g0397481 70.448 335 86 6 7 336 1 327 3.83e-145 444
Msa0989540 MtrunA17_Chr4g0035431 90.693 462 43 0 351 812 1 462 0.0 848
Msa0989540 MtrunA17_Chr4g0035431 66.866 335 98 6 7 336 1 327 2.03e-131 407
Msa0989540 MtrunA17_Chr4g0057761 43.137 408 215 5 351 743 3 408 7.58e-98 317
Msa0989540 MtrunA17_Chr4g0057761 36.474 329 180 11 5 311 1 322 7.35e-43 164
Msa0989540 MtrunA17_Chr5g0397491 77.273 154 33 1 360 511 6 159 1.40e-72 236
Msa0989540 MtrunA17_Chr5g0397491 84.962 133 20 0 16 148 6 138 6.89e-71 231
Msa0989540 MtrunA17_Chr7g0228641 31.839 223 151 1 509 730 95 317 9.62e-29 121
Msa0989540 MtrunA17_Chr7g0228641 27.041 196 132 3 167 351 95 290 6.47e-12 68.9
Msa0989540 MtrunA17_Chr1g0195941 70.732 41 12 0 344 384 54 94 7.70e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0989540 AT5G27120.1 81.532 444 82 0 351 794 1 444 0.0 761
Msa0989540 AT5G27120.1 61.078 334 119 4 7 336 1 327 9.66e-122 381
Msa0989540 AT3G05060.1 80.313 447 88 0 351 797 2 448 0.0 758
Msa0989540 AT3G05060.1 59.581 334 124 4 7 336 2 328 5.37e-118 371
Msa0989540 AT5G27140.2 63.146 426 121 3 351 775 1 391 5.01e-176 518
Msa0989540 AT5G27140.2 48.710 310 123 5 7 311 1 279 1.00e-73 250
Msa0989540 AT5G27140.1 57.959 490 142 6 351 835 1 431 9.81e-175 515
Msa0989540 AT5G27140.1 48.553 311 120 7 7 311 1 277 3.07e-73 249
Msa0989540 AT1G56110.1 44.390 410 207 6 351 743 3 408 9.29e-107 341
Msa0989540 AT1G56110.1 36.556 331 177 13 5 311 1 322 6.12e-48 179
Msa0989540 AT3G12860.1 43.204 412 213 6 349 743 1 408 1.64e-103 332
Msa0989540 AT3G12860.1 35.168 327 183 11 7 311 3 322 1.24e-45 172
Msa0989540 AT1G60170.1 28.972 214 152 0 509 722 95 308 1.84e-21 99.4

Find 201 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCCTTATGATTTATTTAA+TGG 0.111511 6_4:+46473912 Msa0989540:three_prime_UTR
AGTAAAGCTTTCTCAATTTC+AGG 0.162511 6_4:+46465198 Msa0989540:CDS
ATGATATATAAGACCATATT+TGG 0.164834 6_4:-46472833 None:intergenic
ACTTCTTTACACAGGATTTA+TGG 0.208613 6_4:+46471014 Msa0989540:intron
AAAGAAGGAAAAGAAGAAAA+AGG 0.214928 6_4:+46473379 Msa0989540:CDS
AAAGAAAGAAAAGAAGAAAA+AGG 0.230780 6_4:+46473499 Msa0989540:CDS
AACAAGCTCCCCAGTCAAAT+TGG 0.242849 6_4:-46466783 None:intergenic
TTAATGGGGTAGGTCGTCTT+AGG 0.250550 6_4:+46473928 Msa0989540:three_prime_UTR
CCCAACCATAGCAGTCAAAT+TGG 0.271023 6_4:-46472677 None:intergenic
CTGATATATTCTCAAACTTC+TGG 0.278126 6_4:-46471256 None:intergenic
CAAAGACAGCATTGGCTATC+AGG 0.281768 6_4:+46472917 Msa0989540:CDS
ATCCTTATGATTTATTTAAT+GGG 0.289216 6_4:+46473913 Msa0989540:three_prime_UTR
ACCTTGCTCGTCCAGGCTAT+TGG 0.308212 6_4:+46466225 Msa0989540:CDS
GCCATGAGGGTTCGAGAATA+TGG 0.315509 6_4:+46466285 Msa0989540:CDS
GAGCTGAGAAGGCTCTCTTT+AGG 0.330425 6_4:+46472785 Msa0989540:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.331075 6_4:+46472531 Msa0989540:CDS
TGATCTTAGCGAAATCATTC+AGG 0.332797 6_4:+46466320 Msa0989540:CDS
TGAAATTGGTGAACTAGATT+TGG 0.334002 6_4:+46466664 Msa0989540:CDS
AGAAGCAGCTGTGATATCTA+TGG 0.339411 6_4:+46466637 Msa0989540:CDS
AGCTGAGAAGGCTCTCTTTA+GGG 0.345329 6_4:+46472786 Msa0989540:CDS
GGCATATCAGCAGCATCTTC+AGG 0.352795 6_4:-46473710 None:intergenic
ATATCTATGGGTACTGAAAT+AGG 0.353435 6_4:+46472544 Msa0989540:CDS
GGTAGTACCGTGCAGATTCT+TGG 0.357226 6_4:+46472763 Msa0989540:CDS
GAAACTGGGGAATAACATTA+AGG 0.357812 6_4:+46465616 Msa0989540:CDS
TTATCATATGCCTCTATCTT+GGG 0.358705 6_4:-46473139 None:intergenic
ATATCTATGGGAACTGAAAT+TGG 0.360422 6_4:+46466650 Msa0989540:CDS
AGGAAAGCTTTCTGAAGTTC+AGG 0.363092 6_4:+46470181 Msa0989540:CDS
TGAAATAGGTGAACTAGATT+TGG 0.364565 6_4:+46472558 Msa0989540:CDS
ATGTGTAGCTGATGCGAAAC+TGG 0.364897 6_4:+46465601 Msa0989540:CDS
ACCATGATCGTCCAGGCTAT+TGG 0.367547 6_4:+46471826 Msa0989540:CDS
GCAGCTAGTTTGTTGATTGA+TGG 0.370776 6_4:+46471290 Msa0989540:CDS
ACCTTGATCGGCCAGACTCT+TGG 0.377246 6_4:+46466058 Msa0989540:CDS
CTTATCATATGCCTCTATCT+TGG 0.380405 6_4:-46473140 None:intergenic
CAACTTCATGTTCTGGCTCC+TGG 0.380541 6_4:-46473571 None:intergenic
GAAGCTAGGTTCTTGATTGA+TGG 0.385766 6_4:+46465521 Msa0989540:CDS
CAGTTGACGGAACTCATAAC+TGG 0.386655 6_4:+46471559 Msa0989540:CDS
AATCTCGAAGGCAAAGAATT+AGG 0.387421 6_4:+46473088 Msa0989540:CDS
AGAACTTACTAAAATCATTC+AGG 0.388638 6_4:+46471924 Msa0989540:CDS
AACGCTGCCCCAACTTCCTC+TGG 0.396694 6_4:-46466611 None:intergenic
GAATACATCTGCCAGGCTAT+TGG 0.397100 6_4:+46466108 Msa0989540:CDS
AAACATGCTACTCCCAAATA+TGG 0.397940 6_4:+46472820 Msa0989540:CDS
ATATATCATGCATCATTGAT+TGG 0.403489 6_4:+46472847 Msa0989540:CDS
CGCAAGGTCTGTCAAGTTGA+TGG 0.404405 6_4:+46471960 Msa0989540:CDS
CTTCATTGAGCACTTTGAAA+AGG 0.407262 6_4:-46470160 None:intergenic
CTTCATCCAACAATTTGAAA+AGG 0.411047 6_4:-46465177 None:intergenic
CGATTTGCGGGTTCTGCTAA+AGG 0.412920 6_4:+46473112 Msa0989540:CDS
CCAATTTGACTGCTATGGTT+GGG 0.414603 6_4:+46472677 Msa0989540:CDS
GCTATGGTTGGGGAGCTTGT+TGG 0.416805 6_4:+46472688 Msa0989540:CDS
AAAGAATTAGGTCGATTTGC+GGG 0.418834 6_4:+46473100 Msa0989540:CDS
TACTGCAGACTCTGCAAGAA+AGG 0.420932 6_4:+46465329 Msa0989540:CDS
ACCATTGCACCCAATTTGAC+TGG 0.425520 6_4:+46466773 Msa0989540:CDS
TGTTCACAGCAATGCTGTTA+TGG 0.427112 6_4:+46471513 Msa0989540:CDS
ACTTGACAGACCTTGCGTAT+TGG 0.437943 6_4:-46471954 None:intergenic
AAGGATAGAAAGAAGGGAGC+TGG 0.441375 6_4:+46473160 Msa0989540:CDS
AGACATGGCTCCGATGAGCC+TGG 0.442031 6_4:+46471594 Msa0989540:CDS
GAGACGAGCAGCAGCAGAAG+TGG 0.447104 6_4:-46469936 None:intergenic
TTCATCCAACAATTTGAAAA+GGG 0.449761 6_4:-46465176 None:intergenic
GCTGTAGCTGATACGAAGTT+GGG 0.449844 6_4:+46471371 Msa0989540:CDS
TTGGCATCTGCTATTCAATC+TGG 0.455867 6_4:+46473796 Msa0989540:three_prime_UTR
AACAAAAGATATACCTTAGC+AGG 0.456722 6_4:-46473196 None:intergenic
TTCATTGAGCACTTTGAAAA+GGG 0.457174 6_4:-46470159 None:intergenic
GAAGTTGGGGACTATCATTA+AGG 0.458948 6_4:+46471385 Msa0989540:CDS
AGTTCAAGGGCAAAATTTCT+CGG 0.467618 6_4:+46472884 Msa0989540:CDS
TTGAAAAGGGCAAAACCTGC+TGG 0.468831 6_4:-46465163 None:intergenic
AATTTGACTGGGGAGCTTGT+TGG 0.470859 6_4:+46466785 Msa0989540:CDS
CAGTGCGGATGCTGCAAGAA+AGG 0.471034 6_4:+46471048 Msa0989540:CDS
AGAAAAGAAGAAGAAAAGGA+AGG 0.475695 6_4:+46473601 Msa0989540:CDS
GGCTCTGTTCTCCAATCCCA+TGG 0.476474 6_4:-46472971 None:intergenic
ACCCCATTAAATAAATCATA+AGG 0.477459 6_4:-46473915 None:intergenic
ACAAGCTCCCCAGTCAAATT+GGG 0.478660 6_4:-46466782 None:intergenic
AATTAGGCGGACACCTTGAT+CGG 0.481064 6_4:+46466046 Msa0989540:intron
CTTTCTTGCAGCATCCGCAC+TGG 0.482863 6_4:-46471047 None:intergenic
CTCTTTCGGAATATAGAGCT+CGG 0.484469 6_4:+46466720 Msa0989540:CDS
AGCTGTAGCTGATACGAAGT+TGG 0.485755 6_4:+46471370 Msa0989540:CDS
TTGAAAAGGGCGAAACCCGC+AGG 0.486202 6_4:-46470146 None:intergenic
CAAGATAGAGGCATATGATA+AGG 0.489790 6_4:+46473141 Msa0989540:CDS
GTGCTCGCCTCATTGCCCAT+GGG 0.492711 6_4:+46472710 Msa0989540:CDS
ATATGATAAGGATAGAAAGA+AGG 0.493507 6_4:+46473153 Msa0989540:CDS
CCAACCATAGCAGTCAAATT+GGG 0.494028 6_4:-46472676 None:intergenic
CAATTTGACTGCTATGGTTG+GGG 0.494927 6_4:+46472678 Msa0989540:CDS
GATTTGCGGGTTCTGCTAAA+GGG 0.495464 6_4:+46473113 Msa0989540:CDS
AATTCTTTATACAGGACTCA+TGG 0.497638 6_4:+46465295 Msa0989540:intron
CCCAGTCAAATTGGGTGCAA+TGG 0.498431 6_4:-46466774 None:intergenic
TGATATATAAGACCATATTT+GGG 0.499043 6_4:-46472832 None:intergenic
TGAAGACAACACCATGGGAT+TGG 0.499977 6_4:+46472960 Msa0989540:CDS
CCCAATTTGACTGCTATGGT+TGG 0.502179 6_4:+46472676 Msa0989540:CDS
CAAGGTGTAAATAGAACAAA+GGG 0.503570 6_4:-46474014 None:intergenic
TGCACCCAATTTGACTGCTA+TGG 0.506074 6_4:+46472672 Msa0989540:CDS
GGTGCTCGCCTCATTGCCCA+TGG 0.506735 6_4:+46472709 Msa0989540:CDS
CAGAAGCTACAGAGGAAGCT+AGG 0.507232 6_4:+46465507 Msa0989540:CDS
TCTATGATTATCTAAAGAGC+AGG 0.507685 6_4:+46472638 Msa0989540:CDS
ACCAAGAGTCTGGCCGATCA+AGG 0.510665 6_4:-46466059 None:intergenic
AATTAGGTGGTCAAATTGAA+AGG 0.512138 6_4:+46471230 Msa0989540:intron
CAAAGAATTAGGTCGATTTG+CGG 0.513905 6_4:+46473099 Msa0989540:CDS
TGAATGATTTCGCTAAGATC+AGG 0.515561 6_4:-46466318 None:intergenic
CGTCGAGTAAACCAAGAGTC+TGG 0.521991 6_4:-46466069 None:intergenic
ACCAATAGCCTGGACGATCA+TGG 0.522254 6_4:-46471827 None:intergenic
GCAGATTCTTGGAGCTGAGA+AGG 0.524438 6_4:+46472774 Msa0989540:CDS
GGTGGACACCTTGCTCGTCC+AGG 0.527284 6_4:+46466218 Msa0989540:intron
GAACAACTACTGAGCTAAAG+AGG 0.527288 6_4:-46473842 None:intergenic
CTGCTATTCAATCTGGTGAA+TGG 0.528315 6_4:+46473803 Msa0989540:three_prime_UTR
TAATGGGGTAGGTCGTCTTA+GGG 0.528679 6_4:+46473929 Msa0989540:three_prime_UTR
AGCAGTCAAATTGGGTGCAA+TGG 0.533807 6_4:-46472668 None:intergenic
AGGATAATATTCAATATGCA+AGG 0.534458 6_4:+46466340 Msa0989540:CDS
AGAGACACAGATTTGAATGC+AGG 0.535080 6_4:+46473653 Msa0989540:CDS
CAATACACAGACCAATAGCC+TGG 0.535796 6_4:-46466119 None:intergenic
TAAAGGGAAGCCCAAGATAG+AGG 0.536666 6_4:+46473129 Msa0989540:CDS
GACATGGCTCCGATGAGCCT+GGG 0.541122 6_4:+46471595 Msa0989540:CDS
CCATTGCACCCAATTTGACT+GGG 0.544468 6_4:+46466774 Msa0989540:CDS
ATAAATCTTGCAAAGCAGCC+TGG 0.545223 6_4:+46472742 Msa0989540:CDS
GGGTTCGAGAATGGTATGGC+TGG 0.545668 6_4:+46471893 Msa0989540:CDS
ATGCCATGAGGGTTCGAGAA+TGG 0.547091 6_4:+46471884 Msa0989540:CDS
GCGGAATGGAACATGCAGAT+TGG 0.548923 6_4:+46473777 Msa0989540:three_prime_UTR
TCAAGCAGCTCCAAAGTTCA+AGG 0.549296 6_4:+46472870 Msa0989540:CDS
ATTCCGAAAGAGATAAAACT+TGG 0.550920 6_4:-46472603 None:intergenic
GCCATATTCTCGAACCCTCA+TGG 0.556332 6_4:-46466286 None:intergenic
CGTCAAGTAAACCAATAGCC+TGG 0.556425 6_4:-46466236 None:intergenic
AGGTATTCGATTTCAGTTGA+CGG 0.556860 6_4:+46471546 Msa0989540:CDS
ATTCTTTATACAGGACTCAT+GGG 0.558037 6_4:+46465296 Msa0989540:intron
CGTCGAGTAAACCAATAGCC+TGG 0.559795 6_4:-46471837 None:intergenic
TTTATGATTATCTCAAGAGT+AGG 0.560116 6_4:+46466744 Msa0989540:CDS
TATGATTTATTTAATGGGGT+AGG 0.560475 6_4:+46473918 Msa0989540:three_prime_UTR
CATTGTCACAATGAGGAAGC+AGG 0.562702 6_4:-46465571 None:intergenic
TATGATAAGGATAGAAAGAA+GGG 0.562992 6_4:+46473154 Msa0989540:CDS
AGAATCTGCACGGTACTACC+AGG 0.563552 6_4:-46472760 None:intergenic
TGAGGGTTCGAGAATATGGC+TGG 0.567750 6_4:+46466289 Msa0989540:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568195 6_4:+46466638 Msa0989540:CDS
GAAGCAGCTGTGATATCTAT+GGG 0.568328 6_4:+46472532 Msa0989540:CDS
GTATTATTTGAAACTCCAGC+AGG 0.568662 6_4:+46465148 Msa0989540:CDS
GCTATCAGGTGTGATGCACT+TGG 0.570354 6_4:+46472931 Msa0989540:CDS
TGCAGCTTGAAGCGCGATTG+AGG 0.572330 6_4:+46473065 Msa0989540:intron
GCAAGGTGTAAATAGAACAA+AGG 0.572828 6_4:-46474015 None:intergenic
TCCTTATGATTTATTTAATG+GGG 0.572898 6_4:+46473914 Msa0989540:three_prime_UTR
TGATTATCTCAAGAGTAGGA+TGG 0.573495 6_4:+46466748 Msa0989540:CDS
AAGAGTTGAATACATCTGCC+AGG 0.573822 6_4:+46466101 Msa0989540:CDS
GCAAGGTCTGTCAAGTTGAT+GGG 0.574951 6_4:+46471961 Msa0989540:CDS
CTTTACACAGGATTTATGGA+AGG 0.579685 6_4:+46471018 Msa0989540:intron
TGAAAAGGGCGAAACCCGCA+GGG 0.581689 6_4:-46470145 None:intergenic
GCTTGCTGCAAAGACAGCAT+TGG 0.582410 6_4:+46472909 Msa0989540:CDS
TGCTCGCCTCATTGCCCATG+GGG 0.582657 6_4:+46472711 Msa0989540:CDS
TGAGACAAACCCAGGCTCAT+CGG 0.584661 6_4:-46471604 None:intergenic
ACTTTGCAAGCTGATGTAGA+TGG 0.587306 6_4:+46473545 Msa0989540:CDS
ATACCATTCTCGAACCCTCA+TGG 0.587900 6_4:-46471887 None:intergenic
ACCAATAGCCTGGACGAGCA+AGG 0.589368 6_4:-46466226 None:intergenic
GATTGATGGAAAAGCTAGCA+AGG 0.589549 6_4:+46471304 Msa0989540:CDS
ATGTTCCATTCCGCTCTAGT+CGG 0.590834 6_4:-46473768 None:intergenic
TATTAGAGAGCTATGTGACC+AGG 0.598528 6_4:+46466691 Msa0989540:CDS
TGTGTAGCTGATGCGAAACT+GGG 0.599064 6_4:+46465602 Msa0989540:CDS
GATAGAAAGAAGGGAGCTGG+AGG 0.601173 6_4:+46473163 Msa0989540:CDS
ATTGATGGAAAAGCTAGCAA+AGG 0.607482 6_4:+46465536 Msa0989540:CDS
ATTCCGAAAGAGATAAAACC+TGG 0.609367 6_4:-46466709 None:intergenic
AGCTGATGTAGATGGTGACC+AGG 0.610256 6_4:+46473553 Msa0989540:CDS
TCCACCTCAGTATTCTCAGT+AGG 0.610509 6_4:-46473626 None:intergenic
GGTTGACACCATGATCGTCC+AGG 0.612729 6_4:+46471819 Msa0989540:intron
AGGTGTGATGCACTTGGAGA+TGG 0.614670 6_4:+46472937 Msa0989540:CDS
ATGTATTCAACTCTTTATCG+AGG 0.616968 6_4:-46471861 None:intergenic
AAATGCCGACTAGAGCGGAA+TGG 0.618389 6_4:+46473763 Msa0989540:exon
GTTGAATACATATGCCATGA+GGG 0.622022 6_4:+46471873 Msa0989540:CDS
CTCAGCTCCAAGAATCTGCA+CGG 0.622477 6_4:-46472770 None:intergenic
TGCAAGGGCAGTCAAGCTGA+TGG 0.623680 6_4:+46466356 Msa0989540:CDS
CAAGCAGCTCCAAAGTTCAA+GGG 0.624371 6_4:+46472871 Msa0989540:CDS
ATGAGGGTTCGAGAATGGTA+TGG 0.625343 6_4:+46471889 Msa0989540:CDS
AGTATTGACCTTGTGGATTG+CGG 0.628657 6_4:-46469990 None:intergenic
GTACTGTTTGAAACCCCTGC+GGG 0.629229 6_4:+46470131 Msa0989540:CDS
GAATATATCAGAAGCTACAG+AGG 0.630088 6_4:+46465499 Msa0989540:CDS
GAATATATCAGAAGCTACAG+AGG 0.630088 6_4:+46471268 Msa0989540:CDS
AGGACTGATAACTCCTGCTA+AGG 0.630812 6_4:+46473183 Msa0989540:CDS
AGCAGCATCTTCAGGCTCTG+AGG 0.630929 6_4:-46473702 None:intergenic
GTTGAATGCATATGCCATGA+GGG 0.635503 6_4:+46466272 Msa0989540:CDS
TGGCCTCGCTGTTCAAGACA+TGG 0.636384 6_4:+46471579 Msa0989540:CDS
GTTGAAGTTCAGTGCAGACA+AGG 0.637677 6_4:+46471645 Msa0989540:CDS
TTGCTAACTTAAGATCAGCA+AGG 0.639367 6_4:-46474032 None:intergenic
GGATAATATTCAATATGCAA+GGG 0.639698 6_4:+46466341 Msa0989540:CDS
ACCTACTGAGAATACTGAGG+TGG 0.641535 6_4:+46473625 Msa0989540:CDS
CTGTAGCTGATACGAAGTTG+GGG 0.642131 6_4:+46471372 Msa0989540:CDS
ATAGACTATGAGACAAACCC+AGG 0.642701 6_4:-46471612 None:intergenic
AGGATAATATCCAATACGCA+AGG 0.653312 6_4:+46471944 Msa0989540:CDS
GCTGCACACCGCAATCCACA+AGG 0.653882 6_4:+46469982 Msa0989540:CDS
CTTTATACAGGACTCATGGG+AGG 0.655695 6_4:+46465299 Msa0989540:intron
AACGTCTCATTGTCACAATG+AGG 0.656598 6_4:-46465578 None:intergenic
GATGGTGAAGACAACACCAT+GGG 0.656945 6_4:+46472955 Msa0989540:CDS
AGTTGAATGCATATGCCATG+AGG 0.660976 6_4:+46466271 Msa0989540:CDS
ATTGATGGAAAAGCTAGCAA+GGG 0.667037 6_4:+46471305 Msa0989540:CDS
AGTTGAATACATATGCCATG+AGG 0.670426 6_4:+46471872 Msa0989540:CDS
GGGATTGGAGAACAGAGCCA+AGG 0.677522 6_4:+46472975 Msa0989540:CDS
GCTCGCCTCATTGCCCATGG+GGG 0.687875 6_4:+46472712 Msa0989540:CDS
GCGCGATTGAGGAATCTCGA+AGG 0.689896 6_4:+46473076 Msa0989540:CDS
CATTGCACCCAATTTGACTG+GGG 0.691074 6_4:+46466775 Msa0989540:CDS
CATTATCACAATGAGCACGC+AGG 0.694162 6_4:-46471340 None:intergenic
AGTACTGTTTGAAACCCCTG+CGG 0.695414 6_4:+46470130 Msa0989540:CDS
TGCAGAGCTCGATTTCTCTG+AGG 0.700222 6_4:+46466395 Msa0989540:CDS
GAAAAGGGCGAAACCCGCAG+GGG 0.700713 6_4:-46470144 None:intergenic
TGCAAAGCTTGATTTCTCCG+AGG 0.702184 6_4:+46471999 Msa0989540:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 6_4:+46465764 Msa0989540:CDS
GCTGTTATGGAGCTAATGCG+AGG 0.708635 6_4:+46471526 Msa0989540:CDS
AGATGGTGAAGACAACACCA+TGG 0.721514 6_4:+46472954 Msa0989540:CDS
GGAACCTACTGAGAATACTG+AGG 0.738690 6_4:+46473622 Msa0989540:CDS
AGTCAAGTTCGTGAGCAGCG+AGG 0.738868 6_4:-46466814 None:intergenic
GATTGCGGTGTGCAGCAGAG+CGG 0.740149 6_4:-46469975 None:intergenic
GTGTAGCTGATGCGAAACTG+GGG 0.746718 6_4:+46465603 Msa0989540:CDS
GAGCCATGTCTTGAACAGCG+AGG 0.799226 6_4:-46471582 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAAAATAAATTAAACA+TGG + chr6_4:46468884-46468903 Msa0989540:intron 10.0%
!! TAATGATTTAATTAAATGTA+GGG - chr6_4:46469045-46469064 None:intergenic 10.0%
!! ATAATGATTTAATTAAATGT+AGG - chr6_4:46469046-46469065 None:intergenic 10.0%
!! TAAAATATCTTTACAAATAA+GGG + chr6_4:46469195-46469214 Msa0989540:intron 10.0%
!!! CAAAATTTGTTAAAATTATA+GGG - chr6_4:46469349-46469368 None:intergenic 10.0%
!!! TCAAAATTTGTTAAAATTAT+AGG - chr6_4:46469350-46469369 None:intergenic 10.0%
!!! AAATAAACAAAAATTTTACA+AGG + chr6_4:46469483-46469502 Msa0989540:intron 10.0%
!!! AAGTCATAAAAATTAATTTT+AGG + chr6_4:46469572-46469591 Msa0989540:intron 10.0%
!!! AGTCATAAAAATTAATTTTA+GGG + chr6_4:46469573-46469592 Msa0989540:intron 10.0%
!! CAAAATTCTAAATATTTATA+GGG - chr6_4:46469616-46469635 None:intergenic 10.0%
!! ACAAAATTCTAAATATTTAT+AGG - chr6_4:46469617-46469636 None:intergenic 10.0%
!! ACAAAATTATGTATATTTAT+AGG + chr6_4:46469770-46469789 Msa0989540:intron 10.0%
!! CAAAATTATGTATATTTATA+GGG + chr6_4:46469771-46469790 Msa0989540:intron 10.0%
!!! CTATTTCTTTATAAAATTAA+GGG - chr6_4:46469814-46469833 None:intergenic 10.0%
!!! CTTAATTTTATAAAGAAATA+GGG + chr6_4:46469813-46469832 Msa0989540:intron 10.0%
!!! TTAATTTTATAAAGAAATAG+GGG + chr6_4:46469814-46469833 Msa0989540:intron 10.0%
!! TACAACTAAAAAAAAAAAAA+GGG - chr6_4:46470645-46470664 None:intergenic 10.0%
!! ATACAACTAAAAAAAAAAAA+AGG - chr6_4:46470646-46470665 None:intergenic 10.0%
!! TAAATATTATTTGTTTAAAG+AGG - chr6_4:46472209-46472228 None:intergenic 10.0%
!! TTATACAAAATTCTTTATAC+AGG + chr6_4:46465287-46465306 Msa0989540:intron 15.0%
!!! ACCTTAAAATGATTTTTATT+AGG + chr6_4:46466197-46466216 Msa0989540:intron 15.0%
!!! ACCTAATAAAAATCATTTTA+AGG - chr6_4:46466201-46466220 None:intergenic 15.0%
!!! TTAAAATGATTTTTATTAGG+TGG + chr6_4:46466200-46466219 Msa0989540:intron 15.0%
!!! AATGTCTTTTTTTTTTTTGA+GGG - chr6_4:46467975-46467994 None:intergenic 15.0%
!!! AAATGTCTTTTTTTTTTTTG+AGG - chr6_4:46467976-46467995 None:intergenic 15.0%
!!! CTAAAGTTTTTAAATGTTTT+GGG - chr6_4:46468119-46468138 None:intergenic 15.0%
!!! ACTAAAGTTTTTAAATGTTT+TGG - chr6_4:46468120-46468139 None:intergenic 15.0%
!!! TAAAAATTAAAAAAGCACAA+TGG + chr6_4:46468224-46468243 Msa0989540:intron 15.0%
!!! TTTGTTTGAAATAATAGATA+AGG - chr6_4:46468609-46468628 None:intergenic 15.0%
!! ATCAAAAATAGATTAAATCA+AGG + chr6_4:46468859-46468878 Msa0989540:intron 15.0%
!! GTAAAATATCTTTACAAATA+AGG + chr6_4:46469194-46469213 Msa0989540:intron 15.0%
!!! AAAACAAAAATTTTACAAGA+TGG - chr6_4:46469265-46469284 None:intergenic 15.0%
!! AAAAAAAACTTCAAATTACA+AGG - chr6_4:46469297-46469316 None:intergenic 15.0%
!!! TTGTAATTTGAAGTTTTTTT+TGG + chr6_4:46469296-46469315 Msa0989540:intron 15.0%
!!! AATTTTAAGATTTTTGGTTT+TGG - chr6_4:46469452-46469471 None:intergenic 15.0%
!! CAAGTAATTATTTGTAATAT+AGG - chr6_4:46469525-46469544 None:intergenic 15.0%
!!! CCTATTTCTTTATAAAATTA+AGG - chr6_4:46469815-46469834 None:intergenic 15.0%
!!! CCTTAATTTTATAAAGAAAT+AGG + chr6_4:46469812-46469831 Msa0989540:intron 15.0%
!!! TTAACATTTTCCAAAAAAAA+AGG - chr6_4:46470455-46470474 None:intergenic 15.0%
!! ACTGAGTAATTAAAATTTAA+GGG - chr6_4:46470732-46470751 None:intergenic 15.0%
!! TACTGAGTAATTAAAATTTA+AGG - chr6_4:46470733-46470752 None:intergenic 15.0%
!!! TTTTTTTTCGATAATTGAAT+CGG - chr6_4:46473300-46473319 None:intergenic 15.0%
!! ATCCTTATGATTTATTTAAT+GGG + chr6_4:46473913-46473932 Msa0989540:three_prime_UTR 15.0%
!! AATAACATTAAGGAAAAACT+GGG + chr6_4:46465626-46465645 Msa0989540:CDS 20.0%
!!! TTCTTTTTTTTTTTTGTTGC+CGG + chr6_4:46465976-46465995 Msa0989540:intron 20.0%
!!! TCCTGACATTTTTTTTAATT+AGG + chr6_4:46466030-46466049 Msa0989540:intron 20.0%
!!! TGACATTTTTTTTAATTAGG+CGG + chr6_4:46466033-46466052 Msa0989540:intron 20.0%
!!! ATAAAAATCATTTTAAGGTC+AGG - chr6_4:46466196-46466215 None:intergenic 20.0%
!!! ATGGTCTTATATTTATTTCT+AGG + chr6_4:46466902-46466921 Msa0989540:intron 20.0%
!! AAGATTACAAATGAATTCAA+TGG - chr6_4:46467103-46467122 None:intergenic 20.0%
!! ACTGTAAGTAAATACTTATA+GGG - chr6_4:46467861-46467880 None:intergenic 20.0%
!! GTGGTTTCAAAATTTAAAAA+GGG - chr6_4:46468270-46468289 None:intergenic 20.0%
!!! TTACTTCTTTTTAACTAGAT+GGG + chr6_4:46468530-46468549 Msa0989540:intron 20.0%
!!! AATCATTATAGCATCTTTTT+CGG + chr6_4:46469057-46469076 Msa0989540:intron 20.0%
!!! AAATCATGATAGCATATTTT+TGG + chr6_4:46469163-46469182 Msa0989540:intron 20.0%
!!! AATCATGATAGCATATTTTT+GGG + chr6_4:46469164-46469183 Msa0989540:intron 20.0%
!! AAAATTTCCTCAAATTATAG+GGG - chr6_4:46469377-46469396 None:intergenic 20.0%
!! CAAAATTTCCTCAAATTATA+GGG - chr6_4:46469378-46469397 None:intergenic 20.0%
!!! CCTTGTAATTTTAAGATTTT+TGG - chr6_4:46469458-46469477 None:intergenic 20.0%
!! CCAAAAATCTTAAAATTACA+AGG + chr6_4:46469455-46469474 Msa0989540:intron 20.0%
!!! TAAACAAAAATTTTACAAGG+TGG + chr6_4:46469486-46469505 Msa0989540:intron 20.0%
!! AATTACTTGACAAATTTGAT+TGG + chr6_4:46469536-46469555 Msa0989540:intron 20.0%
!!! TACTAACATTTTAACACTTT+TGG - chr6_4:46470114-46470133 None:intergenic 20.0%
!!! TTGTATCTTGTATGTTTTTA+AGG + chr6_4:46470386-46470405 Msa0989540:intron 20.0%
!! TATGAATTATAGTGATGTAT+GGG + chr6_4:46470676-46470695 Msa0989540:intron 20.0%
!! TTCAAATTTCAAATGATCAT+CGG - chr6_4:46470814-46470833 None:intergenic 20.0%
!! CAATTGAAGGATTTATAAAT+GGG - chr6_4:46471092-46471111 None:intergenic 20.0%
!! ATGTAAAAGAGTAAAACAAT+TGG - chr6_4:46472053-46472072 None:intergenic 20.0%
!!! TTTGATTTACTCTTAAATCT+TGG + chr6_4:46472096-46472115 Msa0989540:intron 20.0%
!!! TGTAATATGTTTTAGGATAA+AGG - chr6_4:46472478-46472497 None:intergenic 20.0%
!!! CAAAATCTGTAATATGTTTT+AGG - chr6_4:46472485-46472504 None:intergenic 20.0%
!! TGATATATAAGACCATATTT+GGG - chr6_4:46472835-46472854 None:intergenic 20.0%
!! ATGATATATAAGACCATATT+TGG - chr6_4:46472836-46472855 None:intergenic 20.0%
!! TGATAAAAAGAAAGAAAAGA+AGG + chr6_4:46473475-46473494 Msa0989540:CDS 20.0%
!! AAAGAAAGAAAAGAAGAAAA+AGG + chr6_4:46473499-46473518 Msa0989540:CDS 20.0%
!! AAAAAGAAAAGAAGAAGAAA+AGG + chr6_4:46473597-46473616 Msa0989540:CDS 20.0%
!! ATGACAAGTAAAAATAATAC+TGG - chr6_4:46473867-46473886 None:intergenic 20.0%
!! CATCCTTATGATTTATTTAA+TGG + chr6_4:46473912-46473931 Msa0989540:three_prime_UTR 20.0%
!! TCCTTATGATTTATTTAATG+GGG + chr6_4:46473914-46473933 Msa0989540:three_prime_UTR 20.0%
! TTCATCCAACAATTTGAAAA+GGG - chr6_4:46465179-46465198 None:intergenic 25.0%
! GAATAACATTAAGGAAAAAC+TGG + chr6_4:46465625-46465644 Msa0989540:CDS 25.0%
! GCCTAATTAAAAAAAATGTC+AGG - chr6_4:46466034-46466053 None:intergenic 25.0%
! AGGATAATATTCAATATGCA+AGG + chr6_4:46466340-46466359 Msa0989540:CDS 25.0%
! GGATAATATTCAATATGCAA+GGG + chr6_4:46466341-46466360 Msa0989540:CDS 25.0%
!! AGCTTTAGTGTAAAACAAAT+CGG - chr6_4:46466450-46466469 None:intergenic 25.0%
! ACCTAACATATTTGAAAACA+CGG + chr6_4:46466484-46466503 Msa0989540:intron 25.0%
! TTTATGATTATCTCAAGAGT+AGG + chr6_4:46466744-46466763 Msa0989540:CDS 25.0%
! AAATATGCTACTCTCAAATA+TGG + chr6_4:46466883-46466902 Msa0989540:intron 25.0%
! TTAACTGAATTATGTTGAGT+CGG + chr6_4:46466984-46467003 Msa0989540:intron 25.0%
!!! TTTTGTTATCCAATTGCAAT+TGG + chr6_4:46467230-46467249 Msa0989540:intron 25.0%
!! TATCATTTTCCAATTGCAAT+TGG - chr6_4:46467242-46467261 None:intergenic 25.0%
!! AATTGGCTAAAAGTTTTTCT+TGG + chr6_4:46467363-46467382 Msa0989540:intron 25.0%
! AAAATCATGATGACTAAACA+AGG - chr6_4:46467440-46467459 None:intergenic 25.0%
! GTGTATATACATATTAGTGT+TGG - chr6_4:46467503-46467522 None:intergenic 25.0%
! AGGAAAATAACAAAACTAAG+TGG + chr6_4:46467544-46467563 Msa0989540:intron 25.0%
! GGAAAATAACAAAACTAAGT+GGG + chr6_4:46467545-46467564 Msa0989540:intron 25.0%
!! ACGTTAAACTCTTTTCATAT+AGG + chr6_4:46467808-46467827 Msa0989540:intron 25.0%
!! CGTTAAACTCTTTTCATATA+GGG + chr6_4:46467809-46467828 Msa0989540:intron 25.0%
! GACTGTAAGTAAATACTTAT+AGG - chr6_4:46467862-46467881 None:intergenic 25.0%
! TATTTACTTACAGTCATATC+TGG + chr6_4:46467867-46467886 Msa0989540:intron 25.0%
! GGTGGTTTCAAAATTTAAAA+AGG - chr6_4:46468271-46468290 None:intergenic 25.0%
! ATTACTGCAAAATCCATTAT+AGG + chr6_4:46468318-46468337 Msa0989540:intron 25.0%
! AAAATGAAGTCGAATTTGAT+TGG + chr6_4:46468426-46468445 Msa0989540:intron 25.0%
! ACCAAAACAAAACAAAAACT+TGG + chr6_4:46468489-46468508 Msa0989540:intron 25.0%
!!! ACCAAGTTTTTGTTTTGTTT+TGG - chr6_4:46468493-46468512 None:intergenic 25.0%
! CAAAACAAAAACTTGGTTAA+CGG + chr6_4:46468496-46468515 Msa0989540:intron 25.0%
!!! GTTACTTCTTTTTAACTAGA+TGG + chr6_4:46468529-46468548 Msa0989540:intron 25.0%
!!! TACTTCTTTTTAACTAGATG+GGG + chr6_4:46468531-46468550 Msa0989540:intron 25.0%
! AATAAATTAAACATGGAGTG+AGG + chr6_4:46468891-46468910 Msa0989540:intron 25.0%
! ATAAATTAAACATGGAGTGA+GGG + chr6_4:46468892-46468911 Msa0989540:intron 25.0%
!!! AATCACTTTTTAAGACACAT+CGG - chr6_4:46468965-46468984 None:intergenic 25.0%
!!! TTTTTGGTTTTGAACATTCT+TGG + chr6_4:46469312-46469331 Msa0989540:intron 25.0%
! CCAAAATTTCCTCAAATTAT+AGG - chr6_4:46469379-46469398 None:intergenic 25.0%
!! CCTATAATTTGAGGAAATTT+TGG + chr6_4:46469376-46469395 Msa0989540:intron 25.0%
!! TTTTGGATCTTCATGAATAT+TGG - chr6_4:46469435-46469454 None:intergenic 25.0%
!!! AAATGCTATTTTTCGTTGTA+GGG - chr6_4:46469647-46469666 None:intergenic 25.0%
!!! AAAATGCTATTTTTCGTTGT+AGG - chr6_4:46469648-46469667 None:intergenic 25.0%
!!! AAAAATTCCGTCAACTTTTT+TGG + chr6_4:46469680-46469699 Msa0989540:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr6_4:46469707-46469726 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr6_4:46469708-46469727 None:intergenic 25.0%
!!! TGGAAGCTTTTTTCTTTATA+GGG - chr6_4:46469919-46469938 None:intergenic 25.0%
!!! TTTTGATGCTTTTGTTTTTC+AGG + chr6_4:46470082-46470101 Msa0989540:intron 25.0%
!!! TTCAGTTTTTTCAATTGCAA+TGG + chr6_4:46470256-46470275 Msa0989540:intron 25.0%
!! TTGCATTTTCAGCTTATTTA+AGG + chr6_4:46470324-46470343 Msa0989540:intron 25.0%
!!! AACCATTACACCTTTTTTTT+TGG + chr6_4:46470442-46470461 Msa0989540:intron 25.0%
!! TTCCAAAAAAAAAGGTGTAA+TGG - chr6_4:46470447-46470466 None:intergenic 25.0%
! ACTATAATTCATAGATCATG+AGG - chr6_4:46470669-46470688 None:intergenic 25.0%
! CTATGAATTATAGTGATGTA+TGG + chr6_4:46470675-46470694 Msa0989540:intron 25.0%
! ATGAATTATAGTGATGTATG+GGG + chr6_4:46470677-46470696 Msa0989540:intron 25.0%
! GCAATTGAAGGATTTATAAA+TGG - chr6_4:46471093-46471112 None:intergenic 25.0%
! AAACATCAAAAGTTTCTTAG+GGG - chr6_4:46471435-46471454 None:intergenic 25.0%
! CAAACATCAAAAGTTTCTTA+GGG - chr6_4:46471436-46471455 None:intergenic 25.0%
! TCAAACATCAAAAGTTTCTT+AGG - chr6_4:46471437-46471456 None:intergenic 25.0%
! AAATCGATAAACATTTGCTT+CGG - chr6_4:46471722-46471741 None:intergenic 25.0%
!!! TTTTTTTTTCTTCTGATGTC+TGG + chr6_4:46471740-46471759 Msa0989540:intron 25.0%
!!! TGAATGATTTTAGTAAGTTC+TGG - chr6_4:46471925-46471944 None:intergenic 25.0%
! AGAACTTACTAAAATCATTC+AGG + chr6_4:46471924-46471943 Msa0989540:CDS 25.0%
! TACCTACATGATTGAAAATA+CGG + chr6_4:46472165-46472184 Msa0989540:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr6_4:46472317-46472336 Msa0989540:intron 25.0%
! TGTGATGAAAAAAGATCAAA+TGG - chr6_4:46472432-46472451 None:intergenic 25.0%
! ATATATCATGCATCATTGAT+TGG + chr6_4:46472847-46472866 Msa0989540:CDS 25.0%
! ATATGATAAGGATAGAAAGA+AGG + chr6_4:46473153-46473172 Msa0989540:CDS 25.0%
! TATGATAAGGATAGAAAGAA+GGG + chr6_4:46473154-46473173 Msa0989540:CDS 25.0%
!! AGGTATATCTTTTGTTCATT+TGG + chr6_4:46473203-46473222 Msa0989540:intron 25.0%
!!! TTTGTTCATTTGGTATTGAT+TGG + chr6_4:46473213-46473232 Msa0989540:intron 25.0%
! AAAAAAATCTGATTCTGCAA+TGG + chr6_4:46473313-46473332 Msa0989540:CDS 25.0%
! TGATAAAAAGAAAGCAAAGA+AGG + chr6_4:46473364-46473383 Msa0989540:CDS 25.0%
! AAAGAAGGAAAAGAAGAAAA+AGG + chr6_4:46473379-46473398 Msa0989540:CDS 25.0%
! AAAGAAGAAAAAGGAGAAAA+AGG + chr6_4:46473388-46473407 Msa0989540:CDS 25.0%
! ACAAAAATCTAATACTGCAA+TGG + chr6_4:46473424-46473443 Msa0989540:CDS 25.0%
! AAAGAAGAAAAAGGAGAAAA+AGG + chr6_4:46473388-46473407 Msa0989540:CDS 25.0%
!!! CTTTTTTCTTTCTTTTTGCT+TGG - chr6_4:46473734-46473753 None:intergenic 25.0%
! CAAGCAAAAAGAAAGAAAAA+AGG + chr6_4:46473732-46473751 Msa0989540:CDS 25.0%
! ACCCCATTAAATAAATCATA+AGG - chr6_4:46473918-46473937 None:intergenic 25.0%
! TATGATTTATTTAATGGGGT+AGG + chr6_4:46473918-46473937 Msa0989540:three_prime_UTR 25.0%
!! TAGGGTAAATTTTGTCTTTT+TGG + chr6_4:46473947-46473966 Msa0989540:three_prime_UTR 25.0%
! TTTTGCCCTTTTCAAATTGT+TGG + chr6_4:46465171-46465190 Msa0989540:CDS 30.0%
CTTCATCCAACAATTTGAAA+AGG - chr6_4:46465180-46465199 None:intergenic 30.0%
AGTAAAGCTTTCTCAATTTC+AGG + chr6_4:46465198-46465217 Msa0989540:CDS 30.0%
AATTCTTTATACAGGACTCA+TGG + chr6_4:46465295-46465314 Msa0989540:intron 30.0%
ATTCTTTATACAGGACTCAT+GGG + chr6_4:46465296-46465315 Msa0989540:intron 30.0%
GACGCATATAAACAGATTAA+GGG - chr6_4:46465386-46465405 None:intergenic 30.0%
AGACGCATATAAACAGATTA+AGG - chr6_4:46465387-46465406 None:intergenic 30.0%
CACACAAGTTATGCATAATT+AGG + chr6_4:46465445-46465464 Msa0989540:intron 30.0%
ACAAGTTATGCATAATTAGG+TGG + chr6_4:46465448-46465467 Msa0989540:intron 30.0%
ATGTCATCACAAGTTACTAA+GGG - chr6_4:46465673-46465692 None:intergenic 30.0%
AATGTCATCACAAGTTACTA+AGG - chr6_4:46465674-46465693 None:intergenic 30.0%
CATCAAATAGCTAACTTTGT+CGG + chr6_4:46465706-46465725 Msa0989540:intron 30.0%
! TTTTCACAACAATGCTGTTA+TGG + chr6_4:46465751-46465770 Msa0989540:CDS 30.0%
ACTTGTATATTGATAGGCTA+CGG - chr6_4:46465865-46465884 None:intergenic 30.0%
GCTTCAACTTGTATATTGAT+AGG - chr6_4:46465871-46465890 None:intergenic 30.0%
GCTTTAGTGTAAAACAAATC+GGG - chr6_4:46466449-46466468 None:intergenic 30.0%
! ACCGTGTTTTCAAATATGTT+AGG - chr6_4:46466488-46466507 None:intergenic 30.0%
!! TTTGTATAAAGAAGCATCAC+AGG - chr6_4:46466519-46466538 None:intergenic 30.0%
CAAAAGCTGAAATATGTTTC+AGG - chr6_4:46466591-46466610 None:intergenic 30.0%
ATATCTATGGGAACTGAAAT+TGG + chr6_4:46466650-46466669 Msa0989540:CDS 30.0%
TGAAATTGGTGAACTAGATT+TGG + chr6_4:46466664-46466683 Msa0989540:CDS 30.0%
GATAGATAACTGTTCCTATA+GGG + chr6_4:46467011-46467030 Msa0989540:intron 30.0%
AAAATTCCACACGATATTCT+TGG - chr6_4:46467208-46467227 None:intergenic 30.0%
TGATGACTAAACAAGGTAAT+TGG - chr6_4:46467433-46467452 None:intergenic 30.0%
! ACATATTAGTGTTGGAGTAT+CGG - chr6_4:46467495-46467514 None:intergenic 30.0%
ATTCAATCGTACAGATGAAA+AGG + chr6_4:46467524-46467543 Msa0989540:intron 30.0%
TGAAATTGAATGCCTATTGT+CGG - chr6_4:46467836-46467855 None:intergenic 30.0%
GATGTATTCTCAACAAATAG+GGG - chr6_4:46468097-46468116 None:intergenic 30.0%
GGATGTATTCTCAACAAATA+GGG - chr6_4:46468098-46468117 None:intergenic 30.0%
TGAAGAAGATCTTAACTCAT+CGG + chr6_4:46468167-46468186 Msa0989540:intron 30.0%
! TTTAAAGTTTACTTCCACCA+TGG - chr6_4:46468385-46468404 None:intergenic 30.0%
!!! TTTTGTTTTGGTAAGCTCTT+GGG - chr6_4:46468481-46468500 None:intergenic 30.0%
TCAATTTGATTCACGACAAA+TGG - chr6_4:46468648-46468667 None:intergenic 30.0%
TCAATTTGATTCACGACAAA+TGG - chr6_4:46468648-46468667 None:intergenic 30.0%
GGTTTAATTAGAATGCTGAT+AGG - chr6_4:46469024-46469043 None:intergenic 30.0%
AAAATAGCCTACATTACATG+GGG - chr6_4:46469235-46469254 None:intergenic 30.0%
GAAAATAGCCTACATTACAT+GGG - chr6_4:46469236-46469255 None:intergenic 30.0%
AGAAAATAGCCTACATTACA+TGG - chr6_4:46469237-46469256 None:intergenic 30.0%
TGATTTACCCCTATAATTTG+AGG + chr6_4:46469367-46469386 Msa0989540:intron 30.0%
TGACAAATTTGATTGGACAA+TGG + chr6_4:46469543-46469562 Msa0989540:intron 30.0%
!!! GTTGACGGAATTTTTTGATA+GGG - chr6_4:46469675-46469694 None:intergenic 30.0%
!!! AGTTGACGGAATTTTTTGAT+AGG - chr6_4:46469676-46469695 None:intergenic 30.0%
!!! GTGGAAGCTTTTTTCTTTAT+AGG - chr6_4:46469920-46469939 None:intergenic 30.0%
! TTCATTGAGCACTTTGAAAA+GGG - chr6_4:46470162-46470181 None:intergenic 30.0%
ATGATTTCTGATTCATGACT+TGG + chr6_4:46470301-46470320 Msa0989540:intron 30.0%
!!! AGGAACACTGTTTTTTTGTA+AGG + chr6_4:46470406-46470425 Msa0989540:intron 30.0%
! CTGGTTAAGGTATCTAAAAA+AGG - chr6_4:46470589-46470608 None:intergenic 30.0%
AAAAAAAGGGTTGTGTTAAC+CGG - chr6_4:46470632-46470651 None:intergenic 30.0%
! TCTAGTTTGTAATCTATCAG+AGG + chr6_4:46470758-46470777 Msa0989540:intron 30.0%
ATTTGCAAACTTCTTTACAC+AGG + chr6_4:46471006-46471025 Msa0989540:intron 30.0%
ACTTCTTTACACAGGATTTA+TGG + chr6_4:46471014-46471033 Msa0989540:intron 30.0%
TGATGTTGGCAATATTATGA+TGG + chr6_4:46471121-46471140 Msa0989540:intron 30.0%
GATGTTGGCAATATTATGAT+GGG + chr6_4:46471122-46471141 Msa0989540:intron 30.0%
ATGTTGGCAATATTATGATG+GGG + chr6_4:46471123-46471142 Msa0989540:intron 30.0%
AATTAGGTGGTCAAATTGAA+AGG + chr6_4:46471230-46471249 Msa0989540:intron 30.0%
CTGATATATTCTCAAACTTC+TGG - chr6_4:46471259-46471278 None:intergenic 30.0%
GACTATCATTAAGGAAAAAC+TGG + chr6_4:46471394-46471413 Msa0989540:CDS 30.0%
AACATCAAAAGTTTCTTAGG+GGG - chr6_4:46471434-46471453 None:intergenic 30.0%
ATGTATTCAACTCTTTATCG+AGG - chr6_4:46471864-46471883 None:intergenic 30.0%
! GACAAATTGTATTTCTACCT+CGG - chr6_4:46472019-46472038 None:intergenic 30.0%
ATGTAGGTAAAGAAAGAGTA+CGG - chr6_4:46472154-46472173 None:intergenic 30.0%
! AACCGTATTTTCAATCATGT+AGG - chr6_4:46472170-46472189 None:intergenic 30.0%
TTTGTTTAAAGAGGAATCAC+AGG - chr6_4:46472200-46472219 None:intergenic 30.0%
! TGGTTTTTGATAGAACACAA+TGG - chr6_4:46472313-46472332 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG - chr6_4:46472357-46472376 None:intergenic 30.0%
GATGAAAAAAGATCAAATGG+AGG - chr6_4:46472429-46472448 None:intergenic 30.0%
!! CATATTACAGATTTTGACAG+AGG + chr6_4:46472489-46472508 Msa0989540:intron 30.0%
!! ATATCTATGGGTACTGAAAT+AGG + chr6_4:46472544-46472563 Msa0989540:CDS 30.0%
TGAAATAGGTGAACTAGATT+TGG + chr6_4:46472558-46472577 Msa0989540:CDS 30.0%
!! TGACCAAGTTTTATCTCTTT+CGG + chr6_4:46472600-46472619 Msa0989540:CDS 30.0%
ATTCCGAAAGAGATAAAACT+TGG - chr6_4:46472606-46472625 None:intergenic 30.0%
TCTATGATTATCTAAAGAGC+AGG + chr6_4:46472638-46472657 Msa0989540:CDS 30.0%
AGTTTGGTATAACAACCATA+GGG - chr6_4:46473027-46473046 None:intergenic 30.0%
AAGTTTGGTATAACAACCAT+AGG - chr6_4:46473028-46473047 None:intergenic 30.0%
CAAAATGTGTAAGTGAAGTT+TGG - chr6_4:46473043-46473062 None:intergenic 30.0%
TTATCATATGCCTCTATCTT+GGG - chr6_4:46473142-46473161 None:intergenic 30.0%
AACAAAAGATATACCTTAGC+AGG - chr6_4:46473199-46473218 None:intergenic 30.0%
! TTTTTCACAACTTCATGTTC+TGG - chr6_4:46473581-46473600 None:intergenic 30.0%
AGAAAAGAAGAAGAAAAGGA+AGG + chr6_4:46473601-46473620 Msa0989540:CDS 30.0%
! GCTAAAGAGGTATACAAAAA+TGG - chr6_4:46473832-46473851 None:intergenic 30.0%
!! TTCATGCAACTATGTTTTTG+AGG + chr6_4:46473977-46473996 Msa0989540:three_prime_UTR 30.0%
!! TCATGCAACTATGTTTTTGA+GGG + chr6_4:46473978-46473997 Msa0989540:three_prime_UTR 30.0%
CAAGGTGTAAATAGAACAAA+GGG - chr6_4:46474017-46474036 None:intergenic 30.0%
! GTATTATTTGAAACTCCAGC+AGG + chr6_4:46465148-46465167 Msa0989540:CDS 35.0%
! AGATTAAGGGAAGTATGAGT+GGG - chr6_4:46465373-46465392 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + chr6_4:46465499-46465518 Msa0989540:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+AGG + chr6_4:46465536-46465555 Msa0989540:CDS 35.0%
GAAACTGGGGAATAACATTA+AGG + chr6_4:46465616-46465635 Msa0989540:CDS 35.0%
CTTGTATATTGATAGGCTAC+GGG - chr6_4:46465864-46465883 None:intergenic 35.0%
GTCAGGAAAAAGTTGTTATC+CGG - chr6_4:46466017-46466036 None:intergenic 35.0%
!! GCCTGATACTTTTGATTCTT+CGG + chr6_4:46466157-46466176 Msa0989540:intron 35.0%
!! TCCGAAGAATCAAAAGTATC+AGG - chr6_4:46466161-46466180 None:intergenic 35.0%
TGAATGATTTCGCTAAGATC+AGG - chr6_4:46466321-46466340 None:intergenic 35.0%
TGATCTTAGCGAAATCATTC+AGG + chr6_4:46466320-46466339 Msa0989540:CDS 35.0%
!! TGACCAGGTTTTATCTCTTT+CGG + chr6_4:46466706-46466725 Msa0989540:CDS 35.0%
ATTCCGAAAGAGATAAAACC+TGG - chr6_4:46466712-46466731 None:intergenic 35.0%
TGATTATCTCAAGAGTAGGA+TGG + chr6_4:46466748-46466767 Msa0989540:CDS 35.0%
TGAATTATGTTGAGTCGGTT+GGG + chr6_4:46466989-46467008 Msa0989540:intron 35.0%
GGATAGATAACTGTTCCTAT+AGG + chr6_4:46467010-46467029 Msa0989540:intron 35.0%
TAATCACCAAGAATATCGTG+TGG + chr6_4:46467199-46467218 Msa0989540:intron 35.0%
! TGGACAAGCATGCTTTTAAT+TGG + chr6_4:46467346-46467365 Msa0989540:intron 35.0%
!!! AAAGTTTTTCTTGGTGCTCT+CGG + chr6_4:46467372-46467391 Msa0989540:intron 35.0%
GCTCAGAAATTACACAATGA+TGG - chr6_4:46467468-46467487 None:intergenic 35.0%
ACAATAATTGTAGTCACAGC+AGG - chr6_4:46468071-46468090 None:intergenic 35.0%
GGGATGTATTCTCAACAAAT+AGG - chr6_4:46468099-46468118 None:intergenic 35.0%
ATTATTCCATGTTGCCATGT+TGG - chr6_4:46468199-46468218 None:intergenic 35.0%
! GGATTTTGCAGTAATAAGCA+GGG - chr6_4:46468313-46468332 None:intergenic 35.0%
! TGGATTTTGCAGTAATAAGC+AGG - chr6_4:46468314-46468333 None:intergenic 35.0%
CTATAAGCAGTGACCTATAA+TGG - chr6_4:46468334-46468353 None:intergenic 35.0%
TTTGATTGGACTGTAGAAGA+AGG + chr6_4:46468440-46468459 Msa0989540:intron 35.0%
!!! GTTTTGTTTTGGTAAGCTCT+TGG - chr6_4:46468482-46468501 None:intergenic 35.0%
! CATTTCATGCCAAGTTTTCA+CGG - chr6_4:46468693-46468712 None:intergenic 35.0%
AACTTGGCATGAAATGTGAA+AGG + chr6_4:46468697-46468716 Msa0989540:intron 35.0%
! CATTTCATGCCAAGTTTTCA+CGG - chr6_4:46468693-46468712 None:intergenic 35.0%
AACTTGGCATGAAATGTGAA+AGG + chr6_4:46468697-46468716 Msa0989540:intron 35.0%
! TGTTTTACCCCATGTAATGT+AGG + chr6_4:46469225-46469244 Msa0989540:intron 35.0%
CAAAATCGATGATATGGCAA+GGG - chr6_4:46469407-46469426 None:intergenic 35.0%
ACAAAATCGATGATATGGCA+AGG - chr6_4:46469408-46469427 None:intergenic 35.0%
!!! GCCATATCATCGATTTTGTA+CGG + chr6_4:46469409-46469428 Msa0989540:intron 35.0%
TTAGGGACCAAAAAAGTTGA+CGG - chr6_4:46469690-46469709 None:intergenic 35.0%
TTTGGTCCCTAAAATGCTTA+AGG + chr6_4:46469698-46469717 Msa0989540:intron 35.0%
! GGGTTTACACTATTTCTCTA+GGG - chr6_4:46469899-46469918 None:intergenic 35.0%
! AGGGTTTACACTATTTCTCT+AGG - chr6_4:46469900-46469919 None:intergenic 35.0%
! CTTCATTGAGCACTTTGAAA+AGG - chr6_4:46470163-46470182 None:intergenic 35.0%
!! CTTTTCAAAGTGCTCAATGA+AGG + chr6_4:46470161-46470180 Msa0989540:CDS 35.0%
!! TTAAGGGTAATAAAGCACTG+TGG - chr6_4:46470716-46470735 None:intergenic 35.0%
! ACACTTTCGATTAGAAGTGT+CGG + chr6_4:46470895-46470914 Msa0989540:intron 35.0%
GTTCATATTACAGTGAACTG+TGG + chr6_4:46470926-46470945 Msa0989540:intron 35.0%
ATCAGATCATGAAAGAACGT+AGG - chr6_4:46470972-46470991 None:intergenic 35.0%
CTTTACACAGGATTTATGGA+AGG + chr6_4:46471018-46471037 Msa0989540:intron 35.0%
ATCAGTAAACACGCAATTGA+AGG - chr6_4:46471105-46471124 None:intergenic 35.0%
AATTGCGTGTTTACTGATGT+TGG + chr6_4:46471107-46471126 Msa0989540:intron 35.0%
ACCTAATTATGCATCACTTG+GGG - chr6_4:46471218-46471237 None:intergenic 35.0%
CACCTAATTATGCATCACTT+GGG - chr6_4:46471219-46471238 None:intergenic 35.0%
GAATATATCAGAAGCTACAG+AGG + chr6_4:46465499-46465518 Msa0989540:CDS 35.0%
ATTGATGGAAAAGCTAGCAA+GGG + chr6_4:46465536-46465555 Msa0989540:CDS 35.0%
AGGTATTCGATTTCAGTTGA+CGG + chr6_4:46471546-46471565 Msa0989540:CDS 35.0%
TCTGGTACATTCTGATTCTT+TGG + chr6_4:46471758-46471777 Msa0989540:intron 35.0%
!! GTAAAAAGCATCTTAAGGTC+AGG - chr6_4:46471797-46471816 None:intergenic 35.0%
!! ACCTTAAGATGCTTTTTACC+AGG + chr6_4:46471798-46471817 Msa0989540:intron 35.0%
!! ACCTGGTAAAAAGCATCTTA+AGG - chr6_4:46471802-46471821 None:intergenic 35.0%
AGTTGAATACATATGCCATG+AGG + chr6_4:46471872-46471891 Msa0989540:CDS 35.0%
GTTGAATACATATGCCATGA+GGG + chr6_4:46471873-46471892 Msa0989540:CDS 35.0%
AGGATAATATCCAATACGCA+AGG + chr6_4:46471944-46471963 Msa0989540:CDS 35.0%
GAGTAAAACAATTGGCAACA+CGG - chr6_4:46472045-46472064 None:intergenic 35.0%
! TGTAGGTAAAGAAAGAGTAC+GGG - chr6_4:46472153-46472172 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr6_4:46472333-46472352 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr6_4:46472345-46472364 None:intergenic 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + chr6_4:46472352-46472371 Msa0989540:intron 35.0%
! TTTTCGAATGGTTTCTCTGA+TGG + chr6_4:46472364-46472383 Msa0989540:intron 35.0%
! GTTTCTCTGATGGTTTTCTT+AGG + chr6_4:46472374-46472393 Msa0989540:intron 35.0%
ATTTATTAAGCTACCCCCAT+GGG - chr6_4:46472728-46472747 None:intergenic 35.0%
AAACATGCTACTCCCAAATA+TGG + chr6_4:46472820-46472839 Msa0989540:CDS 35.0%
! GAAATTTTGCCCTTGAACTT+TGG - chr6_4:46472883-46472902 None:intergenic 35.0%
AGTTCAAGGGCAAAATTTCT+CGG + chr6_4:46472884-46472903 Msa0989540:CDS 35.0%
TCAAAGTACAACAAGTACCT+TGG - chr6_4:46472995-46473014 None:intergenic 35.0%
! CTTTGAGTTATATGTCCCTA+TGG + chr6_4:46473009-46473028 Msa0989540:intron 35.0%
AATCTCGAAGGCAAAGAATT+AGG + chr6_4:46473088-46473107 Msa0989540:CDS 35.0%
!! CAAAGAATTAGGTCGATTTG+CGG + chr6_4:46473099-46473118 Msa0989540:CDS 35.0%
!! AAAGAATTAGGTCGATTTGC+GGG + chr6_4:46473100-46473119 Msa0989540:CDS 35.0%
CTTATCATATGCCTCTATCT+TGG - chr6_4:46473143-46473162 None:intergenic 35.0%
! CAAGATAGAGGCATATGATA+AGG + chr6_4:46473141-46473160 Msa0989540:CDS 35.0%
AAAGGAGAAAAAGGAAGAAG+AGG + chr6_4:46473397-46473416 Msa0989540:CDS 35.0%
! TTCTTTTTATCAGCAGCAGA+AGG - chr6_4:46473356-46473375 None:intergenic 35.0%
AAAGGAGAAAAAGGAAGAAG+AGG + chr6_4:46473397-46473416 Msa0989540:CDS 35.0%
CAGGAGAAAAGAAGAAAAAG+AGG + chr6_4:46473672-46473691 Msa0989540:CDS 35.0%
GCAAGGTGTAAATAGAACAA+AGG - chr6_4:46474018-46474037 None:intergenic 35.0%
TTGCTAACTTAAGATCAGCA+AGG - chr6_4:46474035-46474054 None:intergenic 35.0%
! CAGATTAAGGGAAGTATGAG+TGG - chr6_4:46465374-46465393 None:intergenic 40.0%
GAAGCTAGGTTCTTGATTGA+TGG + chr6_4:46465521-46465540 Msa0989540:CDS 40.0%
AACGTCTCATTGTCACAATG+AGG - chr6_4:46465581-46465600 None:intergenic 40.0%
CATTAAGGAAAAACTGGGAC+CGG + chr6_4:46465631-46465650 Msa0989540:CDS 40.0%
CAAGTTACTAAGGGACACTT+GGG - chr6_4:46465664-46465683 None:intergenic 40.0%
ACAAGTTACTAAGGGACACT+TGG - chr6_4:46465665-46465684 None:intergenic 40.0%
TGATCTCGCTGTTCAAGATA+TGG + chr6_4:46465817-46465836 Msa0989540:intron 40.0%
!! CCGGAGAATCAAAAAGTATC+CGG - chr6_4:46465998-46466017 None:intergenic 40.0%
!! CCGGATACTTTTTGATTCTC+CGG + chr6_4:46465995-46466014 Msa0989540:intron 40.0%
AAGAGTTGAATACATCTGCC+AGG + chr6_4:46466101-46466120 Msa0989540:CDS 40.0%
AGTTGAATGCATATGCCATG+AGG + chr6_4:46466271-46466290 Msa0989540:CDS 40.0%
GTTGAATGCATATGCCATGA+GGG + chr6_4:46466272-46466291 Msa0989540:CDS 40.0%
! CATATTTCAGCTTTTGCCAG+AGG + chr6_4:46466595-46466614 Msa0989540:intron 40.0%
AGAAGCAGCTGTGATATCTA+TGG + chr6_4:46466637-46466656 Msa0989540:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + chr6_4:46466638-46466657 Msa0989540:CDS 40.0%
TATTAGAGAGCTATGTGACC+AGG + chr6_4:46466691-46466710 Msa0989540:CDS 40.0%
CTCTTTCGGAATATAGAGCT+CGG + chr6_4:46466720-46466739 Msa0989540:CDS 40.0%
!! CTAGGATTGTTTCTGAACCA+AGG + chr6_4:46466920-46466939 Msa0989540:intron 40.0%
CTGAATTATGTTGAGTCGGT+TGG + chr6_4:46466988-46467007 Msa0989540:intron 40.0%
TGGTGATTAGACTTTGAGCA+AGG - chr6_4:46467188-46467207 None:intergenic 40.0%
GGAAAATGATATGTATCCCG+AGG + chr6_4:46467251-46467270 Msa0989540:intron 40.0%
ATGATATGTATCCCGAGGAA+TGG + chr6_4:46467256-46467275 Msa0989540:intron 40.0%
TGATATGTATCCCGAGGAAT+GGG + chr6_4:46467257-46467276 Msa0989540:intron 40.0%
ATTATCGCTATCCCATTCCT+CGG - chr6_4:46467271-46467290 None:intergenic 40.0%
ATGCTTGTCCACAAATCATG+GGG - chr6_4:46467337-46467356 None:intergenic 40.0%
CATGCTTGTCCACAAATCAT+GGG - chr6_4:46467338-46467357 None:intergenic 40.0%
!!! AAGTTTTTCTTGGTGCTCTC+GGG + chr6_4:46467373-46467392 Msa0989540:intron 40.0%
TGTGTGTTGGAAGTTGAAAC+TGG + chr6_4:46467579-46467598 Msa0989540:intron 40.0%
GTGTGTTGGAAGTTGAAACT+GGG + chr6_4:46467580-46467599 Msa0989540:intron 40.0%
TGTGTTGGAAGTTGAAACTG+GGG + chr6_4:46467581-46467600 Msa0989540:intron 40.0%
TTCATATAGGGACCGACAAT+AGG + chr6_4:46467821-46467840 Msa0989540:intron 40.0%
AACTTTCCAACATGGCAACA+TGG + chr6_4:46468190-46468209 Msa0989540:intron 40.0%
GATCACAACAATATGCTTGG+TGG - chr6_4:46468289-46468308 None:intergenic 40.0%
GGTGATCACAACAATATGCT+TGG - chr6_4:46468292-46468311 None:intergenic 40.0%
AAAGTTTACTTCCACCATGG+TGG - chr6_4:46468382-46468401 None:intergenic 40.0%
TTGTATCCACCGTGAAAACT+TGG + chr6_4:46468681-46468700 Msa0989540:intron 40.0%
TTGTATCCACCGTGAAAACT+TGG + chr6_4:46468681-46468700 Msa0989540:intron 40.0%
GCCGTACAAAATCGATGATA+TGG - chr6_4:46469413-46469432 None:intergenic 40.0%
!! AGTATTGACCTTGTGGATTG+CGG - chr6_4:46469993-46470012 None:intergenic 40.0%
!! AGCGAAAAGTATTGACCTTG+TGG - chr6_4:46470000-46470019 None:intergenic 40.0%
!! AGGAAAGCTTTCTGAAGTTC+AGG + chr6_4:46470181-46470200 Msa0989540:CDS 40.0%
TCTAAACTTCTCTGCGAACT+TGG + chr6_4:46470226-46470245 Msa0989540:intron 40.0%
GAAAATGTTAACCTGTTCCC+CGG + chr6_4:46470464-46470483 Msa0989540:intron 40.0%
AAAATGTTAACCTGTTCCCC+GGG + chr6_4:46470465-46470484 Msa0989540:intron 40.0%
! TGTAATCACATGTGTCACTC+TGG + chr6_4:46470834-46470853 Msa0989540:intron 40.0%
ACCCCAAGTGATGCATAATT+AGG + chr6_4:46471214-46471233 Msa0989540:intron 40.0%
CCACCTAATTATGCATCACT+TGG - chr6_4:46471220-46471239 None:intergenic 40.0%
CCAAGTGATGCATAATTAGG+TGG + chr6_4:46471217-46471236 Msa0989540:intron 40.0%
!! GCAGCTAGTTTGTTGATTGA+TGG + chr6_4:46471290-46471309 Msa0989540:CDS 40.0%
GATTGATGGAAAAGCTAGCA+AGG + chr6_4:46465535-46465554 Msa0989540:CDS 40.0%
GAAGTTGGGGACTATCATTA+AGG + chr6_4:46471385-46471404 Msa0989540:CDS 40.0%
TGTTCACAGCAATGCTGTTA+TGG + chr6_4:46471513-46471532 Msa0989540:CDS 40.0%
ATAGACTATGAGACAAACCC+AGG - chr6_4:46471615-46471634 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr6_4:46472404-46472423 None:intergenic 40.0%
AGAAGCAGCTGTGATATCTA+TGG + chr6_4:46466637-46466656 Msa0989540:CDS 40.0%
GAAGCAGCTGTGATATCTAT+GGG + chr6_4:46466638-46466657 Msa0989540:CDS 40.0%
CCAACCATAGCAGTCAAATT+GGG - chr6_4:46472679-46472698 None:intergenic 40.0%
CCAATTTGACTGCTATGGTT+GGG + chr6_4:46472677-46472696 Msa0989540:CDS 40.0%
CAATTTGACTGCTATGGTTG+GGG + chr6_4:46472678-46472697 Msa0989540:CDS 40.0%
GATTTATTAAGCTACCCCCA+TGG - chr6_4:46472729-46472748 None:intergenic 40.0%
ATAAATCTTGCAAAGCAGCC+TGG + chr6_4:46472742-46472761 Msa0989540:CDS 40.0%
ACTTTGCAAGCTGATGTAGA+TGG + chr6_4:46473545-46473564 Msa0989540:CDS 40.0%
AGAGACACAGATTTGAATGC+AGG + chr6_4:46473653-46473672 Msa0989540:CDS 40.0%
! AAGAAAAATGCCGACTAGAG+CGG + chr6_4:46473758-46473777 Msa0989540:exon 40.0%
TTGGCATCTGCTATTCAATC+TGG + chr6_4:46473796-46473815 Msa0989540:three_prime_UTR 40.0%
CTGCTATTCAATCTGGTGAA+TGG + chr6_4:46473803-46473822 Msa0989540:three_prime_UTR 40.0%
GAACAACTACTGAGCTAAAG+AGG - chr6_4:46473845-46473864 None:intergenic 40.0%
TTGAAAAGGGCAAAACCTGC+TGG - chr6_4:46465166-46465185 None:intergenic 45.0%
CTTTATACAGGACTCATGGG+AGG + chr6_4:46465299-46465318 Msa0989540:intron 45.0%
TACTGCAGACTCTGCAAGAA+AGG + chr6_4:46465329-46465348 Msa0989540:CDS 45.0%
CATTGTCACAATGAGGAAGC+AGG - chr6_4:46465574-46465593 None:intergenic 45.0%
ATGTGTAGCTGATGCGAAAC+TGG + chr6_4:46465601-46465620 Msa0989540:CDS 45.0%
TGTGTAGCTGATGCGAAACT+GGG + chr6_4:46465602-46465621 Msa0989540:CDS 45.0%
AGATATGGCTCCGATGAAGT+TGG + chr6_4:46465832-46465851 Msa0989540:intron 45.0%
GATATGGCTCCGATGAAGTT+GGG + chr6_4:46465833-46465852 Msa0989540:intron 45.0%
GTTGAAGCATAGTGCAGACT+AGG + chr6_4:46465883-46465902 Msa0989540:intron 45.0%
AATTAGGCGGACACCTTGAT+CGG + chr6_4:46466046-46466065 Msa0989540:intron 45.0%
GAATACATCTGCCAGGCTAT+TGG + chr6_4:46466108-46466127 Msa0989540:CDS 45.0%
CAATACACAGACCAATAGCC+TGG - chr6_4:46466122-46466141 None:intergenic 45.0%
CGTCAAGTAAACCAATAGCC+TGG - chr6_4:46466239-46466258 None:intergenic 45.0%
! AGCTTTTGCCAGAGGAAGTT+GGG + chr6_4:46466603-46466622 Msa0989540:intron 45.0%
ACCATTGCACCCAATTTGAC+TGG + chr6_4:46466773-46466792 Msa0989540:CDS 45.0%
CCATTGCACCCAATTTGACT+GGG + chr6_4:46466774-46466793 Msa0989540:CDS 45.0%
CATTGCACCCAATTTGACTG+GGG + chr6_4:46466775-46466794 Msa0989540:CDS 45.0%
ACAAGCTCCCCAGTCAAATT+GGG - chr6_4:46466785-46466804 None:intergenic 45.0%
AACAAGCTCCCCAGTCAAAT+TGG - chr6_4:46466786-46466805 None:intergenic 45.0%
AATTTGACTGGGGAGCTTGT+TGG + chr6_4:46466785-46466804 Msa0989540:CDS 45.0%
!! GATTGTTTCTGAACCAAGGC+TGG + chr6_4:46466924-46466943 Msa0989540:intron 45.0%
CCAGCTAACTAACACCCTAT+AGG - chr6_4:46467028-46467047 None:intergenic 45.0%
! CCTATAGGGTGTTAGTTAGC+TGG + chr6_4:46467025-46467044 Msa0989540:intron 45.0%
TTATCGCTATCCCATTCCTC+GGG - chr6_4:46467270-46467289 None:intergenic 45.0%
!! GGGGGTGATGGATGAAATAT+AGG - chr6_4:46467318-46467337 None:intergenic 45.0%
TGCTTGTCCACAAATCATGG+GGG - chr6_4:46467336-46467355 None:intergenic 45.0%
GCATGCTTGTCCACAAATCA+TGG - chr6_4:46467339-46467358 None:intergenic 45.0%
! GGCACAGAAAGTATGTGTGT+TGG + chr6_4:46467566-46467585 Msa0989540:intron 45.0%
CTCATCGGAACTTTCCAACA+TGG + chr6_4:46468182-46468201 Msa0989540:intron 45.0%
! GATAGTGGTGCTTATTGTGG+AGG - chr6_4:46468360-46468379 None:intergenic 45.0%
! GTGGATAGTGGTGCTTATTG+TGG - chr6_4:46468363-46468382 None:intergenic 45.0%
ATAAGCACCACTATCCACCA+TGG + chr6_4:46468365-46468384 Msa0989540:intron 45.0%
! TTCATGCCAAGTTTTCACGG+TGG - chr6_4:46468690-46468709 None:intergenic 45.0%
! TTCATGCCAAGTTTTCACGG+TGG - chr6_4:46468690-46468709 None:intergenic 45.0%
! AGTACTGTTTGAAACCCCTG+CGG + chr6_4:46470130-46470149 Msa0989540:CDS 45.0%
AAATGTTAACCTGTTCCCCG+GGG + chr6_4:46470466-46470485 Msa0989540:intron 45.0%
! ATGGAAGGAGTTTTCCAGTG+CGG + chr6_4:46471033-46471052 Msa0989540:CDS 45.0%
CATTATCACAATGAGCACGC+AGG - chr6_4:46471343-46471362 None:intergenic 45.0%
AGCTGTAGCTGATACGAAGT+TGG + chr6_4:46471370-46471389 Msa0989540:CDS 45.0%
GCTGTAGCTGATACGAAGTT+GGG + chr6_4:46471371-46471390 Msa0989540:CDS 45.0%
CTGTAGCTGATACGAAGTTG+GGG + chr6_4:46471372-46471391 Msa0989540:CDS 45.0%
CAGTTGACGGAACTCATAAC+TGG + chr6_4:46471559-46471578 Msa0989540:CDS 45.0%
GTTGAAGTTCAGTGCAGACA+AGG + chr6_4:46471645-46471664 Msa0989540:CDS 45.0%
ATACCATTCTCGAACCCTCA+TGG - chr6_4:46471890-46471909 None:intergenic 45.0%
ATGAGGGTTCGAGAATGGTA+TGG + chr6_4:46471889-46471908 Msa0989540:CDS 45.0%
ACTTGACAGACCTTGCGTAT+TGG - chr6_4:46471957-46471976 None:intergenic 45.0%
!! GCAAGGTCTGTCAAGTTGAT+GGG + chr6_4:46471961-46471980 Msa0989540:CDS 45.0%
TGCAAAGCTTGATTTCTCCG+AGG + chr6_4:46471999-46472018 Msa0989540:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr6_4:46472263-46472282 Msa0989540:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr6_4:46472264-46472283 Msa0989540:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr6_4:46472410-46472429 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr6_4:46472420-46472439 None:intergenic 45.0%
AGCAGTCAAATTGGGTGCAA+TGG - chr6_4:46472671-46472690 None:intergenic 45.0%
TGCACCCAATTTGACTGCTA+TGG + chr6_4:46472672-46472691 Msa0989540:CDS 45.0%
CCCAATTTGACTGCTATGGT+TGG + chr6_4:46472676-46472695 Msa0989540:CDS 45.0%
CCCAACCATAGCAGTCAAAT+TGG - chr6_4:46472680-46472699 None:intergenic 45.0%
AGCTGAGAAGGCTCTCTTTA+GGG + chr6_4:46472786-46472805 Msa0989540:CDS 45.0%
TCAAGCAGCTCCAAAGTTCA+AGG + chr6_4:46472870-46472889 Msa0989540:CDS 45.0%
CAAGCAGCTCCAAAGTTCAA+GGG + chr6_4:46472871-46472890 Msa0989540:CDS 45.0%
!! CAAAGACAGCATTGGCTATC+AGG + chr6_4:46472917-46472936 Msa0989540:CDS 45.0%
AGATGGTGAAGACAACACCA+TGG + chr6_4:46472954-46472973 Msa0989540:CDS 45.0%
GATGGTGAAGACAACACCAT+GGG + chr6_4:46472955-46472974 Msa0989540:CDS 45.0%
TGAAGACAACACCATGGGAT+TGG + chr6_4:46472960-46472979 Msa0989540:CDS 45.0%
GATTTGCGGGTTCTGCTAAA+GGG + chr6_4:46473113-46473132 Msa0989540:CDS 45.0%
TAAAGGGAAGCCCAAGATAG+AGG + chr6_4:46473129-46473148 Msa0989540:CDS 45.0%
AAGGATAGAAAGAAGGGAGC+TGG + chr6_4:46473160-46473179 Msa0989540:CDS 45.0%
AGGACTGATAACTCCTGCTA+AGG + chr6_4:46473183-46473202 Msa0989540:CDS 45.0%
GGAACCTACTGAGAATACTG+AGG + chr6_4:46473622-46473641 Msa0989540:CDS 45.0%
ACCTACTGAGAATACTGAGG+TGG + chr6_4:46473625-46473644 Msa0989540:CDS 45.0%
TCCACCTCAGTATTCTCAGT+AGG - chr6_4:46473629-46473648 None:intergenic 45.0%
ATGTTCCATTCCGCTCTAGT+CGG - chr6_4:46473771-46473790 None:intergenic 45.0%
TTAATGGGGTAGGTCGTCTT+AGG + chr6_4:46473928-46473947 Msa0989540:three_prime_UTR 45.0%
TAATGGGGTAGGTCGTCTTA+GGG + chr6_4:46473929-46473948 Msa0989540:three_prime_UTR 45.0%
!!! ATGTTTAATTTATTTTTTTA+CGG - chr6_4:46468885-46468904 None:intergenic 5.0%
!!! ATTTTTTCTTTTTTTAATTT+AGG + chr6_4:46468939-46468958 Msa0989540:intron 5.0%
CAGAAGCTACAGAGGAAGCT+AGG + chr6_4:46465507-46465526 Msa0989540:CDS 50.0%
GTGTAGCTGATGCGAAACTG+GGG + chr6_4:46465603-46465622 Msa0989540:CDS 50.0%
GCTGTTATGGAGCTAATGCG+AGG + chr6_4:46465764-46465783 Msa0989540:CDS 50.0%
CGGGACAAACCCAACTTCAT+CGG - chr6_4:46465845-46465864 None:intergenic 50.0%
CGTCGAGTAAACCAAGAGTC+TGG - chr6_4:46466072-46466091 None:intergenic 50.0%
GCCATGAGGGTTCGAGAATA+TGG + chr6_4:46466285-46466304 Msa0989540:CDS 50.0%
GCCATATTCTCGAACCCTCA+TGG - chr6_4:46466289-46466308 None:intergenic 50.0%
TGAGGGTTCGAGAATATGGC+TGG + chr6_4:46466289-46466308 Msa0989540:CDS 50.0%
TGCAGAGCTCGATTTCTCTG+AGG + chr6_4:46466395-46466414 Msa0989540:CDS 50.0%
! CAGCTTTTGCCAGAGGAAGT+TGG + chr6_4:46466602-46466621 Msa0989540:intron 50.0%
! GCTTTTGCCAGAGGAAGTTG+GGG + chr6_4:46466604-46466623 Msa0989540:intron 50.0%
CCCAGTCAAATTGGGTGCAA+TGG - chr6_4:46466777-46466796 None:intergenic 50.0%
GCTGGAGATGTGTGGTACAA+TGG + chr6_4:46466942-46466961 Msa0989540:intron 50.0%
TCCATCACCCCCATGATTTG+TGG + chr6_4:46467326-46467345 Msa0989540:intron 50.0%
TCCACAAATCATGGGGGTGA+TGG - chr6_4:46467330-46467349 None:intergenic 50.0%
AGTGGTGCTTATTGTGGAGG+AGG - chr6_4:46468357-46468376 None:intergenic 50.0%
!! ACTTCCACCATGGTGGATAG+TGG - chr6_4:46468375-46468394 None:intergenic 50.0%
GGTAAGCTCTTGGGTAAGTC+TGG - chr6_4:46468472-46468491 None:intergenic 50.0%
! GTACTGTTTGAAACCCCTGC+GGG + chr6_4:46470131-46470150 Msa0989540:CDS 50.0%
! CACATGTGTCACTCTGGTGT+TGG + chr6_4:46470840-46470859 Msa0989540:intron 50.0%
CAATGACACATGTCAGACGC+TGG + chr6_4:46470870-46470889 Msa0989540:intron 50.0%
GCTGTTATGGAGCTAATGCG+AGG + chr6_4:46465764-46465783 Msa0989540:CDS 50.0%
TGAGACAAACCCAGGCTCAT+CGG - chr6_4:46471607-46471626 None:intergenic 50.0%
ACCATGATCGTCCAGGCTAT+TGG + chr6_4:46471826-46471845 Msa0989540:CDS 50.0%
ACCAATAGCCTGGACGATCA+TGG - chr6_4:46471830-46471849 None:intergenic 50.0%
CGTCGAGTAAACCAATAGCC+TGG - chr6_4:46471840-46471859 None:intergenic 50.0%
ATGCCATGAGGGTTCGAGAA+TGG + chr6_4:46466283-46466302 Msa0989540:CDS 50.0%
!! CGCAAGGTCTGTCAAGTTGA+TGG + chr6_4:46471960-46471979 Msa0989540:CDS 50.0%
! GAAAGAGTACGGGCTTTGTG+TGG - chr6_4:46472143-46472162 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr6_4:46472265-46472284 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr6_4:46472262-46472281 Msa0989540:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr6_4:46472268-46472287 Msa0989540:intron 50.0%
AGAATCTGCACGGTACTACC+AGG - chr6_4:46472763-46472782 None:intergenic 50.0%
GGTAGTACCGTGCAGATTCT+TGG + chr6_4:46472763-46472782 Msa0989540:CDS 50.0%
CTCAGCTCCAAGAATCTGCA+CGG - chr6_4:46472773-46472792 None:intergenic 50.0%
GCAGATTCTTGGAGCTGAGA+AGG + chr6_4:46472774-46472793 Msa0989540:CDS 50.0%
GAGCTGAGAAGGCTCTCTTT+AGG + chr6_4:46472785-46472804 Msa0989540:CDS 50.0%
! GCTTGCTGCAAAGACAGCAT+TGG + chr6_4:46472909-46472928 Msa0989540:CDS 50.0%
GCTATCAGGTGTGATGCACT+TGG + chr6_4:46472931-46472950 Msa0989540:CDS 50.0%
AGGTGTGATGCACTTGGAGA+TGG + chr6_4:46472937-46472956 Msa0989540:CDS 50.0%
CGATTTGCGGGTTCTGCTAA+AGG + chr6_4:46473112-46473131 Msa0989540:CDS 50.0%
GATAGAAAGAAGGGAGCTGG+AGG + chr6_4:46473163-46473182 Msa0989540:CDS 50.0%
AGCTGATGTAGATGGTGACC+AGG + chr6_4:46473553-46473572 Msa0989540:CDS 50.0%
!! CAACTTCATGTTCTGGCTCC+TGG - chr6_4:46473574-46473593 None:intergenic 50.0%
GGCATATCAGCAGCATCTTC+AGG - chr6_4:46473713-46473732 None:intergenic 50.0%
! AAATGCCGACTAGAGCGGAA+TGG + chr6_4:46473763-46473782 Msa0989540:exon 50.0%
GCGGAATGGAACATGCAGAT+TGG + chr6_4:46473777-46473796 Msa0989540:three_prime_UTR 50.0%
ACCTTGATCGGCCAGACTCT+TGG + chr6_4:46466058-46466077 Msa0989540:CDS 55.0%
ACCAAGAGTCTGGCCGATCA+AGG - chr6_4:46466062-46466081 None:intergenic 55.0%
ACCTTGCTCGTCCAGGCTAT+TGG + chr6_4:46466225-46466244 Msa0989540:CDS 55.0%
ACCAATAGCCTGGACGAGCA+AGG - chr6_4:46466229-46466248 None:intergenic 55.0%
TGCAAGGGCAGTCAAGCTGA+TGG + chr6_4:46466356-46466375 Msa0989540:CDS 55.0%
AGTCAAGTTCGTGAGCAGCG+AGG - chr6_4:46466817-46466836 None:intergenic 55.0%
GAACCAAGGCTGGAGATGTG+TGG + chr6_4:46466934-46466953 Msa0989540:intron 55.0%
GTACCACACATCTCCAGCCT+TGG - chr6_4:46466940-46466959 None:intergenic 55.0%
AGCACCACTATCCACCATGG+TGG + chr6_4:46468368-46468387 Msa0989540:intron 55.0%
TGAAAAGGGCGAAACCCGCA+GGG - chr6_4:46470148-46470167 None:intergenic 55.0%
TTGAAAAGGGCGAAACCCGC+AGG - chr6_4:46470149-46470168 None:intergenic 55.0%
TGCTTCCTTAACCAGTGCCC+CGG - chr6_4:46470486-46470505 None:intergenic 55.0%
TTGTGTTAACCGGTGCCTCC+GGG - chr6_4:46470622-46470641 None:intergenic 55.0%
GTTGTGTTAACCGGTGCCTC+CGG - chr6_4:46470623-46470642 None:intergenic 55.0%
CTTTCTTGCAGCATCCGCAC+TGG - chr6_4:46471050-46471069 None:intergenic 55.0%
CAGTGCGGATGCTGCAAGAA+AGG + chr6_4:46471048-46471067 Msa0989540:CDS 55.0%
TGGCCTCGCTGTTCAAGACA+TGG + chr6_4:46471579-46471598 Msa0989540:CDS 55.0%
GAGCCATGTCTTGAACAGCG+AGG - chr6_4:46471585-46471604 None:intergenic 55.0%
! GGACGATCATGGTGTCAACC+TGG - chr6_4:46471819-46471838 None:intergenic 55.0%
GGTTGACACCATGATCGTCC+AGG + chr6_4:46471819-46471838 Msa0989540:intron 55.0%
GGGTTCGAGAATGGTATGGC+TGG + chr6_4:46471893-46471912 Msa0989540:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr6_4:46472270-46472289 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr6_4:46472276-46472295 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr6_4:46472277-46472296 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr6_4:46472276-46472295 Msa0989540:intron 55.0%
GCTATGGTTGGGGAGCTTGT+TGG + chr6_4:46472688-46472707 Msa0989540:CDS 55.0%
GGCTCTGTTCTCCAATCCCA+TGG - chr6_4:46472974-46472993 None:intergenic 55.0%
GGGATTGGAGAACAGAGCCA+AGG + chr6_4:46472975-46472994 Msa0989540:CDS 55.0%
TGCAGCTTGAAGCGCGATTG+AGG + chr6_4:46473065-46473084 Msa0989540:intron 55.0%
GCGCGATTGAGGAATCTCGA+AGG + chr6_4:46473076-46473095 Msa0989540:CDS 55.0%
AGCAGCATCTTCAGGCTCTG+AGG - chr6_4:46473705-46473724 None:intergenic 55.0%
AACGCTGCCCCAACTTCCTC+TGG - chr6_4:46466614-46466633 None:intergenic 60.0%
GAGACGAGCAGCAGCAGAAG+TGG - chr6_4:46469939-46469958 None:intergenic 60.0%
GATTGCGGTGTGCAGCAGAG+CGG - chr6_4:46469978-46469997 None:intergenic 60.0%
GCTGCACACCGCAATCCACA+AGG + chr6_4:46469982-46470001 Msa0989540:CDS 60.0%
GAAAAGGGCGAAACCCGCAG+GGG - chr6_4:46470147-46470166 None:intergenic 60.0%
CTTCCTTAACCAGTGCCCCG+GGG - chr6_4:46470484-46470503 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG - chr6_4:46470485-46470504 None:intergenic 60.0%
TGTGTTAACCGGTGCCTCCG+GGG - chr6_4:46470621-46470640 None:intergenic 60.0%
AGACATGGCTCCGATGAGCC+TGG + chr6_4:46471594-46471613 Msa0989540:CDS 60.0%
GACATGGCTCCGATGAGCCT+GGG + chr6_4:46471595-46471614 Msa0989540:CDS 60.0%
GTGCTCGCCTCATTGCCCAT+GGG + chr6_4:46472710-46472729 Msa0989540:CDS 60.0%
TGCTCGCCTCATTGCCCATG+GGG + chr6_4:46472711-46472730 Msa0989540:CDS 60.0%
AGCTACCCCCATGGGCAATG+AGG - chr6_4:46472720-46472739 None:intergenic 60.0%
GGGACACTTGGGCAGCACAC+CGG - chr6_4:46465653-46465672 None:intergenic 65.0%
GGTGGACACCTTGCTCGTCC+AGG + chr6_4:46466218-46466237 Msa0989540:intron 65.0%
TAACCTGTTCCCCGGGGCAC+TGG + chr6_4:46470472-46470491 Msa0989540:intron 65.0%
TAACCAGTGCCCCGGGGAAC+AGG - chr6_4:46470478-46470497 None:intergenic 65.0%
!! GTTCCCCGGGGCACTGGTTA+AGG + chr6_4:46470478-46470497 Msa0989540:intron 65.0%
TTAACCAGTGCCCCGTGCCC+CGG + chr6_4:46470601-46470620 Msa0989540:intron 65.0%
GGTGCTCGCCTCATTGCCCA+TGG + chr6_4:46472709-46472728 Msa0989540:CDS 65.0%
GCTCGCCTCATTGCCCATGG+GGG + chr6_4:46472712-46472731 Msa0989540:CDS 65.0%
!! GGGGCACGGGGCACTGGTTA+AGG - chr6_4:46470602-46470621 None:intergenic 70.0%
TAACCGGTGCCTCCGGGGCA+CGG - chr6_4:46470616-46470635 None:intergenic 70.0%
AACCGGTGCCTCCGGGGCAC+GGG - chr6_4:46470615-46470634 None:intergenic 75.0%
! ACCAGTGCCCCGTGCCCCGG+AGG + chr6_4:46470604-46470623 Msa0989540:intron 80.0%
! ACCGGTGCCTCCGGGGCACG+GGG - chr6_4:46470614-46470633 None:intergenic 80.0%
! GCCTCCGGGGCACGGGGCAC+TGG - chr6_4:46470608-46470627 None:intergenic 85.0%
!! GCCCCGTGCCCCGGAGGCAC+CGG + chr6_4:46470610-46470629 Msa0989540:intron 85.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 46465124 46474136 46465124 ID=Msa0989540;Name=Msa0989540
chr6_4 mRNA 46465124 46474136 46465124 ID=Msa0989540-mRNA-1;Parent=Msa0989540;Name=Msa0989540-mRNA-1;_AED=0.10;_eAED=0.11;_QI=0|0.53|0.5|1|0.93|0.81|16|361|947
chr6_4 exon 46465124 46465219 46465124 ID=Msa0989540-mRNA-1:exon:10411;Parent=Msa0989540-mRNA-1
chr6_4 exon 46465309 46465350 46465309 ID=Msa0989540-mRNA-1:exon:10412;Parent=Msa0989540-mRNA-1
chr6_4 exon 46465467 46465652 46465467 ID=Msa0989540-mRNA-1:exon:10413;Parent=Msa0989540-mRNA-1
chr6_4 exon 46465740 46465826 46465740 ID=Msa0989540-mRNA-1:exon:10414;Parent=Msa0989540-mRNA-1
chr6_4 exon 46466052 46466129 46466052 ID=Msa0989540-mRNA-1:exon:10415;Parent=Msa0989540-mRNA-1
chr6_4 exon 46466219 46466416 46466219 ID=Msa0989540-mRNA-1:exon:10416;Parent=Msa0989540-mRNA-1
chr6_4 exon 46466605 46466852 46466605 ID=Msa0989540-mRNA-1:exon:10417;Parent=Msa0989540-mRNA-1
chr6_4 exon 46469910 46470003 46469910 ID=Msa0989540-mRNA-1:exon:10418;Parent=Msa0989540-mRNA-1
chr6_4 exon 46470104 46470202 46470104 ID=Msa0989540-mRNA-1:exon:10419;Parent=Msa0989540-mRNA-1
chr6_4 exon 46471028 46471069 46471028 ID=Msa0989540-mRNA-1:exon:10420;Parent=Msa0989540-mRNA-1
chr6_4 exon 46471236 46471415 46471236 ID=Msa0989540-mRNA-1:exon:10421;Parent=Msa0989540-mRNA-1
chr6_4 exon 46471502 46471666 46471502 ID=Msa0989540-mRNA-1:exon:10422;Parent=Msa0989540-mRNA-1
chr6_4 exon 46471820 46472020 46471820 ID=Msa0989540-mRNA-1:exon:10423;Parent=Msa0989540-mRNA-1
chr6_4 exon 46472499 46472996 46472499 ID=Msa0989540-mRNA-1:exon:10424;Parent=Msa0989540-mRNA-1
chr6_4 exon 46473070 46473204 46473070 ID=Msa0989540-mRNA-1:exon:10425;Parent=Msa0989540-mRNA-1
chr6_4 exon 46473281 46474136 46473281 ID=Msa0989540-mRNA-1:exon:10426;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46465124 46465219 46465124 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46465309 46465350 46465309 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46465467 46465652 46465467 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46465740 46465826 46465740 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46466052 46466129 46466052 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46466219 46466416 46466219 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46466605 46466852 46466605 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46469910 46470003 46469910 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46470104 46470202 46470104 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46471028 46471069 46471028 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46471236 46471415 46471236 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46471502 46471666 46471502 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46471820 46472020 46471820 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46472499 46472996 46472499 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46473070 46473204 46473070 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 CDS 46473281 46473775 46473281 ID=Msa0989540-mRNA-1:cds;Parent=Msa0989540-mRNA-1
chr6_4 three_prime_UTR 46473776 46474136 46473776 ID=Msa0989540-mRNA-1:three_prime_utr;Parent=Msa0989540-mRNA-1
Gene Sequence

>Msa0989540

TTTGTTGGAAAAGTGACAATGCTTGTATTATTTGAAACTCCAGCAGGTTTTGCCCTTTTCAAATTGTTGGATGAAGTAAAGCTTTCTCAATTTCAGGACTCATGGGAGGACTTTTCTACTGCAGACTCTGCAAGAAAGGTGGTCAAATTGATAGCTTTCTCTAAGTTTGAGAATATATCAGAAGCTACAGAGGAAGCTAGGTTCTTGATTGATGGAAAAGCTAGCAAAGGTCTGCGCAAGTTCCTGCTTCCTCATTGTGACAATGAGACGTTATGTGTAGCTGATGCGAAACTGGGGAATAACATTAAGGAAAAACTGGGACCGAAAATCAAATGTTTTCACAACAATGCTGTTATGGAGCTAATGCGAGGTATTCAATATCAGTTGAGAGAACTTGTAACTGATCTCGCTGCGGACACCTTGATCGGCCAGACTCTTGGTTTACTCGACGATCTTGATGAAGAGTTGAATACATCTGCCAGGCTATTGGTGGACACCTTGCTCGTCCAGGCTATTGGTTTACTTGACGATTTTGATAAAGAGTTGAATGCATATGCCATGAGGGTTCGAGAATATGGCTGGCATTTTCCTGATCTTAGCGAAATCATTCAGGATAATATTCAATATGCAAGGGCAGTCAAGCTGATGGTTGATCAAATAAACGCTGCAGAGCTCGATTTCTCTGAGCTTTTGCCAGAGGAAGTTGGGGCAGCGTTGCAAGAAGCAGCTGTGATATCTATGGGAACTGAAATTGGTGAACTAGATTTGGCAGATATTAGAGAGCTATGTGACCAGGTTTTATCTCTTTCGGAATATAGAGCTCGGCTTTATGATTATCTCAAGAGTAGGATGGACACCATTGCACCCAATTTGACTGGGGAGCTTGTTGGTGCTCGCCTCGCTGCTCACGAACTTGACTTGTTAAATCTTGCATATGTAAACCCTATAAAGAAAAAAGCTTCCACTTCTGCTGCTGCTCGTCTCTCTCGTTTCATCTTCTCCGCTCTGCTGCACACCGCAATCCACAAGGTTTGTTCCAAAAGTGTTAAAATGTTAGTACTGTTTGAAACCCCTGCGGGTTTCGCCCTTTTCAAAGTGCTCAATGAAGGAAAGCTTTCTGAAGTTCAGGATTTATGGAAGGAGTTTTCCAGTGCGGATGCTGCAAGAAAGGTGGTCAAATTGAAAGGCTTCCAGAAGTTTGAGAATATATCAGAAGCTACAGAGGCAGCTAGTTTGTTGATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTGCGTGCTCATTGTGATAATGAGACGTTAGCTGTAGCTGATACGAAGTTGGGGACTATCATTAAGGAAAAACTGAAAATCGACTGTGTTCACAGCAATGCTGTTATGGAGCTAATGCGAGGTATTCGATTTCAGTTGACGGAACTCATAACTGGCCTCGCTGTTCAAGACATGGCTCCGATGAGCCTGGGTTTGTCTCATAGTCTATCAAGATACAAGTTGAAGTTCAGTGCAGACAAGGTTGACACCATGATCGTCCAGGCTATTGGTTTACTCGACGACCTCGATAAAGAGTTGAATACATATGCCATGAGGGTTCGAGAATGGTATGGCTGGCATTTTCCAGAACTTACTAAAATCATTCAGGATAATATCCAATACGCAAGGTCTGTCAAGTTGATGGGTGATCGCATTAATGCTGCAAAGCTTGATTTCTCCGAGATTTTGACAGAGGAAGTTGAAGCAGAGTTGAAAGAAGCAGCTGTGATATCTATGGGTACTGAAATAGGTGAACTAGATTTGGCAAATATTAGAGAGCTATGTGACCAAGTTTTATCTCTTTCGGAATACAGAGCTCAGCTCTATGATTATCTAAAGAGCAGGATGAACACCATTGCACCCAATTTGACTGCTATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGGGGTAGCTTAATAAATCTTGCAAAGCAGCCTGGTAGTACCGTGCAGATTCTTGGAGCTGAGAAGGCTCTCTTTAGGGCATTGAAGACTAAACATGCTACTCCCAAATATGGTCTTATATATCATGCATCATTGATTGGTCAAGCAGCTCCAAAGTTCAAGGGCAAAATTTCTCGGTCGCTTGCTGCAAAGACAGCATTGGCTATCAGGTGTGATGCACTTGGAGATGGTGAAGACAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAAGCGCGATTGAGGAATCTCGAAGGCAAAGAATTAGGTCGATTTGCGGGTTCTGCTAAAGGGAAGCCCAAGATAGAGGCATATGATAAGGATAGAAAGAAGGGAGCTGGAGGACTGATAACTCCTGCTAAGACATATAATACTGCAGCCGATTCAATTATCGAAAAAAAATCTGATTCTGCAATGGATGAAGATACAGAAGAGCTTTCTGCTGCTGATAAAAAGAAAGCAAAGAAGGAAAAGAAGAAAAAGGAGAAAAAGGAAGAAGAGGATACACAAAAATCTAATACTGCAATGGATGAAGATACACAAAAGCCTTCTGCTGCTGATAAAAAGAAAGAAAAGAAGGAAAAGAAAGAAAAGAAGAAAAAGGAGAAAAAGGAAGAAGAGGATACAACTTTGCAAGCTGATGTAGATGGTGACCAGGAGCCAGAACATGAAGTTGTGAAAAAAGAAAAGAAGAAGAAAAGGAAGGAACCTACTGAGAATACTGAGGTGGAGAATAGAGACACAGATTTGAATGCAGGAGAAAAGAAGAAAAAGAGGAAAAAATCCTCAGAGCCTGAAGATGCTGCTGATATGCCAAGCAAAAAGAAAGAAAAAAGGAAGAAGAAAAATGCCGACTAG
Protein sequence

>Msa0989540

FVGKVTMLVLFETPAGFALFKLLDEVKLSQFQDSWEDFSTADSARKVVKLIAFSKFENISEATEEARFLIDGKASKGLRKFLLPHCDNETLCVADAKLGNNIKEKLGPKIKCFHNNAVMELMRGIQYQLRELVTDLAADTLIGQTLGLLDDLDEELNTSARLLVDTLLVQAIGLLDDFDKELNAYAMRVREYGWHFPDLSEIIQDNIQYARAVKLMVDQINAAELDFSELLPEEVGAALQEAAVISMGTEIGELDLADIRELCDQVLSLSEYRARLYDYLKSRMDTIAPNLTGELVGARLAAHELDLLNLAYVNPIKKKASTSAAARLSRFIFSALLHTAIHKVCSKSVKMLVLFETPAGFALFKVLNEGKLSEVQDLWKEFSSADAARKVVKLKGFQKFENISEATEAASLLIDGKASKGLRKFLRAHCDNETLAVADTKLGTIIKEKLKIDCVHSNAVMELMRGIRFQLTELITGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARSVKLMGDRINAAKLDFSEILTEEVEAELKEAAVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGEDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNTAADSIIEKKSDSAMDEDTEELSAADKKKAKKEKKKKEKKEEEDTQKSNTAMDEDTQKPSAADKKKEKKEKKEKKKKEKKEEEDTTLQADVDGDQEPEHEVVKKEKKKKRKEPTENTEVENRDTDLNAGEKKKKRKKSSEPEDAADMPSKKKEKRKKKNAD*