AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0978490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0978490 MtrunA17_Chr6g0457381 97.739 398 9 0 1 398 1 398 0.0 788
Msa0978490 MtrunA17_Chr3g0130621 33.618 351 206 9 5 344 36 370 1.93e-53 183
Msa0978490 MtrunA17_Chr3g0130621 30.748 361 212 10 34 385 13 344 5.63e-44 158
Msa0978490 MtrunA17_Chr3g0130621 30.469 256 152 8 1 245 137 377 1.65e-23 101
Msa0978490 MtrunA17_Chr6g0457301 78.161 87 14 1 268 349 6 92 1.28e-38 134
Msa0978490 MtrunA17_Chr8g0384631 31.560 282 173 6 11 284 25 294 1.37e-34 131
Msa0978490 MtrunA17_Chr8g0384631 33.688 282 159 9 66 336 28 292 2.43e-34 131
Msa0978490 MtrunA17_Chr8g0384631 32.234 273 156 8 124 385 20 274 6.11e-32 124
Msa0978490 MtrunA17_Chr8g0384631 30.078 256 153 8 1 245 67 307 3.80e-25 105
Msa0978490 MtrunA17_Chr3g0109811 31.071 280 155 8 79 334 294 559 2.09e-33 132
Msa0978490 MtrunA17_Chr3g0109811 25.904 332 214 9 5 316 325 644 4.64e-23 101
Msa0978490 MtrunA17_Chr3g0109811 29.353 201 126 2 193 392 302 487 6.68e-19 89.0
Msa0978490 MtrunA17_Chr7g0233601 29.551 379 216 11 5 347 48 411 6.01e-32 125
Msa0978490 MtrunA17_Chr7g0233601 30.882 204 130 5 154 348 106 307 7.92e-17 82.0
Msa0978490 MtrunA17_Chr7g0233601 32.258 186 112 5 200 385 106 277 9.25e-13 69.3
Msa0978490 MtrunA17_Chr3g0123301 25.798 376 244 10 4 351 166 534 1.50e-29 120
Msa0978490 MtrunA17_Chr3g0123301 27.922 308 197 9 42 335 152 448 1.08e-25 108
Msa0978490 MtrunA17_Chr3g0123301 28.044 271 167 9 93 347 150 408 5.86e-17 82.8
Msa0978490 MtrunA17_Chr7g0220131 29.703 303 173 8 50 324 16 306 3.65e-29 118
Msa0978490 MtrunA17_Chr7g0220131 27.387 398 213 13 3 350 21 392 2.13e-25 107
Msa0978490 MtrunA17_Chr7g0220131 26.923 338 162 8 5 264 83 413 4.52e-21 94.7
Msa0978490 MtrunA17_Chr7g0220131 27.036 307 162 14 111 385 24 300 2.95e-17 83.2
Msa0978490 MtrunA17_Chr3g0094741 26.984 378 215 12 38 387 321 665 1.47e-28 118
Msa0978490 MtrunA17_Chr3g0094741 28.443 334 179 10 79 384 309 610 2.53e-28 117
Msa0978490 MtrunA17_Chr3g0094741 28.190 337 202 12 5 316 340 661 8.19e-27 113
Msa0978490 MtrunA17_Chr3g0094741 29.319 191 119 2 196 385 320 495 7.03e-18 85.9
Msa0978490 MtrunA17_Chr5g0442001 27.318 399 228 13 17 387 290 654 2.13e-28 117
Msa0978490 MtrunA17_Chr5g0442001 27.976 336 203 11 5 316 330 650 1.34e-24 106
Msa0978490 MtrunA17_Chr8g0362061 27.415 383 225 13 4 349 243 609 2.30e-28 117
Msa0978490 MtrunA17_Chr8g0362061 27.761 335 207 12 5 316 306 628 2.44e-23 102
Msa0978490 MtrunA17_Chr8g0362061 30.366 191 117 2 196 385 286 461 4.53e-19 89.7
Msa0978490 MtrunA17_Chr7g0244411 31.250 304 164 11 104 384 220 501 1.50e-27 115
Msa0978490 MtrunA17_Chr7g0244411 29.814 322 188 9 38 336 266 572 7.30e-25 107
Msa0978490 MtrunA17_Chr7g0244411 28.358 335 202 13 5 316 285 604 1.60e-22 100
Msa0978490 MtrunA17_Chr7g0244411 28.017 232 138 4 168 385 224 440 2.48e-18 87.4
Msa0978490 MtrunA17_Chr1g0202151 28.533 375 212 11 38 387 281 624 2.75e-27 114
Msa0978490 MtrunA17_Chr1g0202151 32.035 231 133 7 136 344 264 492 1.32e-25 109
Msa0978490 MtrunA17_Chr1g0202151 26.647 334 210 8 5 316 300 620 3.11e-25 108
Msa0978490 MtrunA17_Chr1g0202151 32.161 199 119 2 188 385 272 455 2.15e-20 93.6
Msa0978490 MtrunA17_Chr6g0463421 31.111 270 145 9 136 383 261 511 3.10e-27 114
Msa0978490 MtrunA17_Chr6g0463421 28.647 377 209 11 38 387 278 621 2.71e-26 111
Msa0978490 MtrunA17_Chr6g0463421 26.048 334 212 8 5 316 297 617 1.28e-23 103
Msa0978490 MtrunA17_Chr6g0463421 33.166 199 117 3 188 385 269 452 3.49e-20 93.2
Msa0978490 MtrunA17_Chr2g0317861 26.462 359 246 7 3 350 129 480 4.09e-27 112
Msa0978490 MtrunA17_Chr2g0317861 26.984 315 201 9 41 340 116 416 3.90e-24 103
Msa0978490 MtrunA17_Chr4g0013271 29.773 309 167 10 97 384 24 303 1.04e-26 112
Msa0978490 MtrunA17_Chr4g0013271 29.934 304 179 12 51 334 31 320 1.54e-25 109
Msa0978490 MtrunA17_Chr4g0013271 30.031 323 186 9 38 336 68 374 7.62e-24 103
Msa0978490 MtrunA17_Chr4g0013271 31.359 287 167 10 4 270 138 414 3.88e-21 95.9
Msa0978490 MtrunA17_Chr4g0013271 26.126 333 212 9 5 316 87 406 4.84e-19 89.7
Msa0978490 MtrunA17_Chr4g0013271 28.205 234 148 5 157 385 24 242 7.88e-18 85.9
Msa0978490 MtrunA17_Chr5g0415871 28.392 398 236 12 7 385 18 385 1.04e-26 110
Msa0978490 MtrunA17_Chr5g0415871 27.246 334 208 11 5 318 67 385 2.76e-25 106
Msa0978490 MtrunA17_Chr5g0415871 31.330 233 141 5 109 331 15 238 1.54e-21 95.5
Msa0978490 MtrunA17_Chr5g0404371 28.814 354 220 8 7 347 84 418 1.52e-26 110
Msa0978490 MtrunA17_Chr5g0404371 28.383 303 143 9 142 392 55 335 2.67e-20 92.4
Msa0978490 MtrunA17_Chr5g0404371 24.026 308 184 5 4 263 135 440 1.31e-16 81.3
Msa0978490 MtrunA17_Chr3g0130871 30.097 309 176 8 36 316 29 325 5.07e-25 104
Msa0978490 MtrunA17_Chr3g0130871 28.221 326 176 12 91 386 31 328 5.14e-22 95.9
Msa0978490 MtrunA17_Chr3g0130871 31.429 210 117 5 187 386 20 212 6.17e-19 87.0
Msa0978490 MtrunA17_Chr3g0130871 25.000 288 178 8 5 264 50 327 3.26e-12 67.0
Msa0978490 MtrunA17_Chr1g0167471 29.412 323 187 11 40 334 222 531 2.39e-24 105
Msa0978490 MtrunA17_Chr1g0167471 26.757 370 219 9 51 396 289 630 6.53e-24 104
Msa0978490 MtrunA17_Chr1g0167471 28.511 235 139 4 168 388 234 453 7.81e-22 97.8
Msa0978490 MtrunA17_Chr1g0167471 28.125 288 168 10 1 262 343 617 1.58e-17 84.7
Msa0978490 MtrunA17_Chr7g0253611 26.100 341 213 9 1 323 151 470 4.39e-23 101
Msa0978490 MtrunA17_Chr7g0253611 28.521 284 168 11 5 271 207 472 7.14e-23 101
Msa0978490 MtrunA17_Chr7g0253611 31.797 217 126 8 151 352 188 397 5.99e-22 98.6
Msa0978490 MtrunA17_Chr7g0253611 35.766 137 83 2 216 347 155 291 4.51e-17 83.6
Msa0978490 MtrunA17_Chr7g0253611 32.642 193 111 7 157 336 145 331 3.33e-16 80.9
Msa0978490 MtrunA17_Chr3g0142381 27.100 369 223 13 38 385 58 401 2.24e-21 95.9
Msa0978490 MtrunA17_Chr3g0142381 32.677 254 138 12 134 357 39 289 4.52e-21 95.1
Msa0978490 MtrunA17_Chr3g0142381 26.426 333 218 10 8 322 82 405 5.85e-21 94.7
Msa0978490 MtrunA17_Chr3g0142381 28.197 305 174 11 55 327 20 311 1.80e-20 93.2
Msa0978490 MtrunA17_Chr3g0142381 27.758 281 182 7 4 268 130 405 1.83e-18 87.4
Msa0978490 MtrunA17_Chr3g0142381 31.683 202 128 5 188 383 47 244 3.10e-17 83.6
Msa0978490 MtrunA17_Chr7g0239601 32.258 186 108 2 200 385 42 209 1.00e-20 89.7
Msa0978490 MtrunA17_Chr7g0239601 33.526 173 104 5 151 316 39 207 5.47e-20 87.8
Msa0978490 MtrunA17_Chr7g0239601 30.000 190 118 5 82 265 30 210 1.13e-17 81.3
Msa0978490 MtrunA17_Chr7g0239601 27.451 153 94 2 233 385 23 158 5.59e-13 67.8
Msa0978490 MtrunA17_Chr7g0239601 29.375 160 103 3 5 164 58 207 4.48e-11 62.0
Msa0978490 MtrunA17_Chr3g0112381 32.716 162 89 4 226 385 17 160 6.27e-18 80.5
Msa0978490 MtrunA17_Chr1g0146211 28.519 270 151 11 148 385 54 313 2.55e-17 82.8
Msa0978490 MtrunA17_Chr1g0146211 27.414 321 176 16 70 347 37 343 2.97e-15 76.6
Msa0978490 MtrunA17_Chr1g0146211 28.311 219 116 8 190 383 48 250 3.67e-15 76.3
Msa0978490 MtrunA17_Chr1g0146211 25.874 286 165 11 37 283 56 333 1.35e-11 65.5
Msa0978490 MtrunA17_Chr3g0140201 26.623 308 177 14 80 348 37 334 4.04e-15 77.0
Msa0978490 MtrunA17_Chr3g0140201 27.014 211 113 9 7 179 130 337 1.55e-11 65.9
Msa0978490 MtrunA17_Chr3g0112371 28.413 271 155 9 44 279 105 371 1.99e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0978490 AT3G02510.1 82.051 390 68 2 2 390 4 392 0.0 652
Msa0978490 AT5G16040.1 81.726 394 70 2 2 394 4 396 0.0 652
Msa0978490 AT3G02510.3 83.284 335 54 2 57 390 1 334 0.0 572
Msa0978490 AT3G02510.3 28.070 342 203 9 5 317 1 328 4.06e-32 124
Msa0978490 AT5G16040.2 80.635 315 60 1 2 316 4 317 0.0 518
Msa0978490 AT5G16040.2 31.399 293 172 7 57 336 7 283 1.97e-36 136
Msa0978490 AT5G16040.2 31.944 288 147 10 112 383 9 263 1.78e-25 106
Msa0978490 AT3G02510.2 82.951 305 51 1 2 306 4 307 0.0 516
Msa0978490 AT3G02510.2 32.677 254 133 7 112 347 9 242 1.61e-25 105
Msa0978490 AT5G63860.1 34.286 350 206 8 5 344 36 371 9.09e-53 182
Msa0978490 AT5G63860.1 30.194 361 215 9 34 385 13 345 2.29e-43 157
Msa0978490 AT5G63860.1 31.250 256 152 6 135 383 1 239 1.53e-31 124
Msa0978490 AT5G63860.1 29.924 264 160 7 1 255 137 384 7.58e-25 105
Msa0978490 AT5G60870.1 27.316 421 236 11 5 384 50 441 7.08e-36 137
Msa0978490 AT5G60870.1 30.472 233 135 6 164 385 115 331 4.16e-18 86.3
Msa0978490 AT3G26100.3 29.577 355 218 9 5 334 64 411 7.94e-35 134
Msa0978490 AT3G26100.3 30.392 306 192 10 42 335 49 345 6.28e-28 114
Msa0978490 AT3G26100.3 29.496 139 98 0 206 344 54 192 3.51e-16 80.5
Msa0978490 AT3G26100.3 28.205 273 164 11 93 347 47 305 1.90e-15 78.2
Msa0978490 AT3G26100.4 29.577 355 218 9 5 334 64 411 7.94e-35 134
Msa0978490 AT3G26100.4 30.392 306 192 10 42 335 49 345 6.28e-28 114
Msa0978490 AT3G26100.4 29.496 139 98 0 206 344 54 192 3.51e-16 80.5
Msa0978490 AT3G26100.4 28.205 273 164 11 93 347 47 305 1.90e-15 78.2
Msa0978490 AT3G26100.1 29.577 355 218 9 5 334 64 411 7.94e-35 134
Msa0978490 AT3G26100.1 30.392 306 192 10 42 335 49 345 6.28e-28 114
Msa0978490 AT3G26100.1 29.496 139 98 0 206 344 54 192 3.51e-16 80.5
Msa0978490 AT3G26100.1 28.205 273 164 11 93 347 47 305 1.90e-15 78.2
Msa0978490 AT5G60870.4 29.086 361 193 10 5 325 50 387 8.47e-35 132
Msa0978490 AT5G60870.4 30.472 233 135 6 164 385 115 331 4.09e-18 85.9
Msa0978490 AT3G26100.5 29.577 355 218 9 5 334 164 511 1.59e-34 134
Msa0978490 AT3G26100.5 29.677 310 189 10 42 335 149 445 1.19e-27 114
Msa0978490 AT3G26100.5 29.496 139 98 0 206 344 154 292 2.94e-16 80.9
Msa0978490 AT3G26100.5 28.205 273 164 11 93 347 147 405 1.74e-15 78.6
Msa0978490 AT3G26100.6 29.577 355 218 9 5 334 164 511 1.59e-34 134
Msa0978490 AT3G26100.6 29.677 310 189 10 42 335 149 445 1.19e-27 114
Msa0978490 AT3G26100.6 29.496 139 98 0 206 344 154 292 2.94e-16 80.9
Msa0978490 AT3G26100.6 28.205 273 164 11 93 347 147 405 1.74e-15 78.6
Msa0978490 AT3G26100.2 29.577 355 218 9 5 334 164 511 1.59e-34 134
Msa0978490 AT3G26100.2 29.677 310 189 10 42 335 149 445 1.19e-27 114
Msa0978490 AT3G26100.2 29.496 139 98 0 206 344 154 292 2.94e-16 80.9
Msa0978490 AT3G26100.2 28.205 273 164 11 93 347 147 405 1.74e-15 78.6
Msa0978490 AT5G60870.2 28.612 353 192 8 5 317 50 382 3.40e-34 132
Msa0978490 AT5G60870.2 30.472 233 135 6 164 385 115 331 3.57e-18 86.3
Msa0978490 AT3G02300.1 29.348 368 209 12 48 384 13 360 4.16e-32 127
Msa0978490 AT3G02300.1 26.121 379 208 10 3 332 20 375 2.58e-25 107
Msa0978490 AT3G02300.1 29.344 259 150 7 32 264 161 412 3.20e-20 92.8
Msa0978490 AT3G02300.2 29.333 375 200 12 48 384 24 371 6.40e-32 126
Msa0978490 AT3G02300.2 26.121 379 208 10 3 332 31 386 3.79e-25 107
Msa0978490 AT3G02300.2 29.344 259 150 7 32 264 172 423 3.55e-20 92.4
Msa0978490 AT5G19420.3 26.984 378 231 10 38 396 314 665 3.70e-31 126
Msa0978490 AT5G19420.3 28.228 333 203 9 6 316 334 652 7.46e-27 113
Msa0978490 AT5G19420.3 26.724 348 188 12 68 384 290 601 1.94e-26 112
Msa0978490 AT5G19420.3 30.366 191 115 3 196 385 313 486 3.42e-19 90.5
Msa0978490 AT5G12350.1 27.049 366 222 10 38 384 310 649 6.23e-31 125
Msa0978490 AT5G12350.1 31.937 191 112 3 196 385 309 482 3.71e-20 93.6
Msa0978490 AT5G11580.1 29.805 359 186 10 22 326 2 348 6.86e-31 124
Msa0978490 AT5G11580.1 26.478 423 238 15 5 364 37 449 2.60e-21 96.3
Msa0978490 AT5G11580.1 27.397 292 147 11 151 396 18 290 1.74e-16 81.6
Msa0978490 AT5G19420.2 26.984 378 231 10 38 396 348 699 8.20e-31 125
Msa0978490 AT5G19420.2 28.228 333 203 9 6 316 368 686 1.09e-26 113
Msa0978490 AT5G19420.2 27.299 348 186 13 68 384 324 635 2.46e-26 112
Msa0978490 AT5G19420.2 30.366 191 115 3 196 385 347 520 4.49e-19 90.1
Msa0978490 AT5G19420.1 26.984 378 231 10 38 396 314 665 1.03e-30 125
Msa0978490 AT5G19420.1 28.228 333 203 9 6 316 334 652 1.33e-26 112
Msa0978490 AT5G19420.1 27.299 348 186 13 68 384 290 601 2.64e-26 112
Msa0978490 AT5G19420.1 30.366 191 115 3 196 385 313 486 4.33e-19 90.1
Msa0978490 AT1G27060.1 29.330 358 215 10 7 349 19 353 3.29e-30 120
Msa0978490 AT1G27060.1 31.128 257 149 5 109 357 16 252 5.06e-26 108
Msa0978490 AT1G27060.1 33.728 169 95 2 216 384 17 168 4.11e-18 85.9
Msa0978490 AT1G27060.1 29.885 174 106 5 3 174 171 330 2.23e-11 65.5
Msa0978490 AT5G08710.1 28.784 403 238 16 8 385 54 432 2.63e-29 118
Msa0978490 AT5G08710.1 26.567 335 216 7 5 316 103 430 1.86e-20 93.2
Msa0978490 AT5G08710.1 30.698 215 123 8 182 385 6 205 9.95e-16 79.0
Msa0978490 AT3G55580.1 25.349 430 213 10 44 383 72 483 3.40e-29 119
Msa0978490 AT3G55580.1 28.839 267 149 9 28 262 226 483 9.03e-19 88.6
Msa0978490 AT5G48330.2 29.545 352 212 8 5 345 103 429 7.18e-29 117
Msa0978490 AT5G48330.2 37.952 166 93 4 188 349 74 233 8.72e-24 103
Msa0978490 AT5G48330.2 28.125 256 128 7 151 351 84 338 1.35e-20 93.6
Msa0978490 AT5G60870.3 33.491 212 122 5 151 347 37 244 2.30e-28 112
Msa0978490 AT5G60870.3 29.818 275 175 7 56 317 3 272 6.25e-25 103
Msa0978490 AT5G60870.3 26.996 263 152 10 23 264 30 273 1.32e-18 85.5
Msa0978490 AT5G48330.1 29.745 353 211 9 5 345 103 430 5.87e-28 115
Msa0978490 AT5G48330.1 37.725 167 93 4 188 349 74 234 1.05e-23 102
Msa0978490 AT5G48330.1 28.016 257 128 7 151 351 84 339 1.80e-20 93.2
Msa0978490 AT4G14368.3 31.273 275 151 8 131 384 243 500 1.10e-27 115
Msa0978490 AT4G14368.3 29.101 378 223 11 38 396 265 616 5.96e-27 114
Msa0978490 AT4G14368.3 29.167 288 149 9 79 334 253 517 1.70e-25 109
Msa0978490 AT4G14368.3 26.786 336 206 11 5 316 284 603 1.07e-21 98.2
Msa0978490 AT4G14368.3 28.879 232 136 5 168 385 223 439 2.16e-18 88.2
Msa0978490 AT4G14368.2 31.273 275 151 8 131 384 248 505 1.17e-27 115
Msa0978490 AT4G14368.2 29.101 378 223 11 38 396 270 621 6.14e-27 114
Msa0978490 AT4G14368.2 29.167 288 149 9 79 334 258 522 1.72e-25 109
Msa0978490 AT4G14368.2 26.786 336 206 11 5 316 289 608 1.03e-21 98.2
Msa0978490 AT4G14368.2 28.879 232 136 5 168 385 228 444 2.18e-18 88.2
Msa0978490 AT4G14368.4 31.273 275 151 8 131 384 250 507 1.18e-27 115
Msa0978490 AT4G14368.4 29.101 378 223 11 38 396 272 623 6.14e-27 114
Msa0978490 AT4G14368.4 29.167 288 149 9 79 334 260 524 1.66e-25 109
Msa0978490 AT4G14368.4 26.786 336 206 11 5 316 291 610 1.04e-21 98.2
Msa0978490 AT4G14368.4 28.879 232 136 5 168 385 230 446 2.19e-18 88.2
Msa0978490 AT4G14368.1 30.795 302 168 10 104 384 226 507 1.32e-27 115
Msa0978490 AT4G14368.1 29.101 378 223 11 38 396 272 623 5.37e-27 114
Msa0978490 AT4G14368.1 29.167 288 149 9 79 334 260 524 1.63e-25 109
Msa0978490 AT4G14368.1 26.786 336 206 11 5 316 291 610 1.23e-21 97.8
Msa0978490 AT4G14368.1 28.879 232 136 5 168 385 230 446 2.70e-18 87.8
Msa0978490 AT1G76950.1 29.443 377 208 13 38 387 283 628 3.57e-27 114
Msa0978490 AT1G76950.1 30.627 271 162 7 105 351 235 503 5.54e-26 110
Msa0978490 AT1G76950.1 25.444 338 211 11 5 316 302 624 5.51e-22 99.0
Msa0978490 AT1G76950.1 32.500 200 118 3 188 385 274 458 7.48e-20 92.4
Msa0978490 AT3G15430.6 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G15430.4 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G15430.2 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G15430.3 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G15430.5 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G15430.1 28.086 324 216 6 33 347 161 476 4.26e-27 112
Msa0978490 AT3G53830.3 26.478 389 198 8 48 350 64 450 5.49e-27 112
Msa0978490 AT3G53830.3 29.811 265 139 7 37 264 215 469 1.77e-21 96.3
Msa0978490 AT3G53830.3 30.526 190 114 6 34 215 293 472 4.74e-16 80.1
Msa0978490 AT5G42140.2 28.919 370 217 11 38 387 279 622 1.47e-26 112
Msa0978490 AT5G42140.2 27.465 284 160 8 79 334 267 532 2.39e-23 103
Msa0978490 AT5G42140.2 25.688 327 222 8 5 316 298 618 3.83e-21 96.3
Msa0978490 AT5G42140.2 31.683 202 122 2 185 385 267 453 6.90e-20 92.4
Msa0978490 AT5G42140.1 28.919 370 217 11 38 387 279 622 1.47e-26 112
Msa0978490 AT5G42140.1 27.465 284 160 8 79 334 267 532 2.39e-23 103
Msa0978490 AT5G42140.1 25.688 327 222 8 5 316 298 618 3.83e-21 96.3
Msa0978490 AT5G42140.1 31.683 202 122 2 185 385 267 453 6.90e-20 92.4
Msa0978490 AT1G65920.1 25.979 281 169 6 80 337 283 547 6.73e-26 110
Msa0978490 AT1G65920.1 28.793 323 214 8 5 316 313 630 1.10e-25 110
Msa0978490 AT1G65920.1 25.594 379 231 10 38 395 294 642 6.19e-24 104
Msa0978490 AT1G65920.1 27.638 199 120 4 194 389 291 468 4.45e-15 77.8
Msa0978490 AT1G65920.2 25.979 281 169 6 80 337 237 501 7.50e-26 110
Msa0978490 AT1G65920.2 28.793 323 214 8 5 316 267 584 1.18e-25 109
Msa0978490 AT1G65920.2 25.594 379 231 10 38 395 248 596 6.41e-24 104
Msa0978490 AT1G65920.2 27.638 199 120 4 194 389 245 422 4.88e-15 77.8
Msa0978490 AT3G23270.1 28.307 378 226 10 38 396 253 604 2.68e-25 108
Msa0978490 AT3G23270.1 30.132 302 170 10 104 384 207 488 3.88e-25 108
Msa0978490 AT3G23270.1 26.571 350 237 10 5 338 272 617 8.19e-20 92.4
Msa0978490 AT3G23270.1 29.741 232 134 6 168 385 211 427 8.07e-18 86.3
Msa0978490 AT3G23270.2 28.307 378 226 10 38 396 257 608 2.87e-25 108
Msa0978490 AT3G23270.2 30.132 302 170 10 104 384 211 492 4.15e-25 108
Msa0978490 AT3G23270.2 26.571 350 237 10 5 338 276 621 8.84e-20 92.4
Msa0978490 AT3G23270.2 29.741 232 134 6 168 385 215 431 8.70e-18 86.3
Msa0978490 AT5G08710.2 28.328 293 176 10 8 280 54 332 4.15e-23 99.4
Msa0978490 AT5G08710.2 33.730 252 129 8 150 383 83 314 3.66e-22 96.7
Msa0978490 AT5G08710.2 25.649 308 185 11 52 334 44 332 1.08e-17 84.0
Msa0978490 AT5G08710.2 30.698 215 123 8 182 385 6 205 6.47e-16 78.6
Msa0978490 AT5G08710.2 26.891 238 154 5 5 229 103 333 2.52e-12 67.8
Msa0978490 AT3G53830.4 29.710 276 163 6 78 350 231 478 8.11e-23 100
Msa0978490 AT3G53830.4 30.451 266 138 8 37 265 243 498 1.87e-21 96.7
Msa0978490 AT3G53830.4 26.764 411 208 14 44 385 60 446 1.90e-18 87.4
Msa0978490 AT3G53830.4 30.526 190 114 6 34 215 321 500 5.16e-16 80.1
Msa0978490 AT3G47660.7 29.856 278 159 10 4 262 226 486 4.22e-22 99.0
Msa0978490 AT3G47660.7 27.798 277 154 10 79 329 144 400 4.27e-20 93.2
Msa0978490 AT3G47660.7 24.242 363 232 10 39 387 157 490 2.34e-19 90.9
Msa0978490 AT3G47660.3 29.856 278 159 10 4 262 368 628 6.30e-22 98.6
Msa0978490 AT3G47660.3 27.798 277 154 10 79 329 286 542 6.34e-20 92.8
Msa0978490 AT3G47660.3 24.242 363 232 10 39 387 299 632 5.73e-19 89.7
Msa0978490 AT3G47660.5 29.856 278 159 10 4 262 368 628 6.30e-22 98.6
Msa0978490 AT3G47660.5 27.798 277 154 10 79 329 286 542 6.34e-20 92.8
Msa0978490 AT3G47660.5 24.242 363 232 10 39 387 299 632 5.73e-19 89.7
Msa0978490 AT3G47660.1 29.856 278 159 10 4 262 371 631 6.30e-22 98.6
Msa0978490 AT3G47660.1 27.798 277 154 10 79 329 289 545 6.89e-20 92.4
Msa0978490 AT3G47660.1 24.242 363 232 10 39 387 302 635 6.63e-19 89.4
Msa0978490 AT3G47660.2 29.856 278 159 10 4 262 371 631 6.48e-22 98.6
Msa0978490 AT3G47660.2 27.798 277 154 10 79 329 289 545 7.15e-20 92.4
Msa0978490 AT3G47660.2 24.242 363 232 10 39 387 302 635 6.45e-19 89.7
Msa0978490 AT3G47660.6 29.371 286 166 10 4 270 293 561 6.52e-22 98.6
Msa0978490 AT3G47660.6 27.798 277 154 10 79 329 211 467 5.00e-20 92.8
Msa0978490 AT3G47660.6 24.242 363 232 10 39 387 224 557 3.81e-19 90.1
Msa0978490 AT3G47660.4 29.577 284 168 11 4 270 407 675 8.28e-22 98.2
Msa0978490 AT3G47660.4 27.798 277 154 10 79 329 325 581 6.39e-20 92.8
Msa0978490 AT3G47660.4 24.242 363 232 10 39 387 338 671 6.79e-19 89.4
Msa0978490 AT1G69710.2 26.738 374 232 11 4 347 248 609 2.94e-21 96.7
Msa0978490 AT1G69710.2 32.143 196 117 2 200 394 292 472 5.80e-19 89.7
Msa0978490 AT1G69710.2 27.138 269 154 8 38 282 396 646 8.46e-16 80.1
Msa0978490 AT3G53830.1 26.197 355 174 8 48 316 64 416 3.03e-21 95.5
Msa0978490 AT3G53830.1 37.079 89 55 1 34 122 293 380 1.77e-11 65.9
Msa0978490 AT1G69710.1 26.738 374 232 11 4 347 261 622 3.07e-21 96.7
Msa0978490 AT1G69710.1 32.143 196 117 2 200 394 305 485 5.77e-19 89.7
Msa0978490 AT1G69710.1 27.138 269 154 8 38 282 409 659 8.97e-16 80.1
Msa0978490 AT1G19880.1 26.263 396 238 13 30 397 50 419 1.05e-20 94.4
Msa0978490 AT1G19880.1 32.057 209 124 8 188 383 47 250 1.01e-19 91.7
Msa0978490 AT1G19880.1 24.776 335 215 9 8 316 82 405 5.49e-19 89.4
Msa0978490 AT1G19880.1 27.368 285 156 10 80 327 47 317 4.95e-18 86.3
Msa0978490 AT3G03790.3 28.230 209 132 5 151 346 188 391 2.23e-20 94.0
Msa0978490 AT3G03790.3 26.513 347 167 11 1 278 151 478 6.58e-20 92.8
Msa0978490 AT3G03790.3 31.447 159 97 4 187 336 176 331 3.19e-14 75.1
Msa0978490 AT3G03790.3 32.117 137 88 2 216 347 155 291 4.18e-13 71.6
Msa0978490 AT3G03790.1 28.230 209 132 5 151 346 185 388 2.31e-20 94.0
Msa0978490 AT3G03790.1 24.412 340 218 7 2 323 149 467 1.83e-18 88.2
Msa0978490 AT3G03790.1 31.447 159 97 4 187 336 173 328 3.09e-14 75.1
Msa0978490 AT3G03790.1 31.690 142 92 2 211 347 147 288 8.92e-14 73.9
Msa0978490 AT3G03790.2 28.230 209 132 5 151 346 188 391 2.32e-20 94.0
Msa0978490 AT3G03790.2 24.340 341 219 7 1 323 151 470 1.09e-18 89.0
Msa0978490 AT3G03790.2 31.447 159 97 4 187 336 176 331 3.03e-14 75.1
Msa0978490 AT3G03790.2 32.117 137 88 2 216 347 155 291 4.23e-13 71.6
Msa0978490 AT3G53830.2 27.206 408 202 15 48 384 64 447 3.54e-18 86.3
Msa0978490 AT3G53830.2 37.079 89 55 1 34 122 321 408 1.58e-11 66.2
Msa0978490 AT5G11580.2 31.122 196 104 6 161 326 3 197 6.80e-15 76.3

Find 156 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAGGTGCATTTCATAATT+TGG 0.163205 6_4:-14532576 Msa0978490:CDS
TGAGAGTTGAGTTTGGATTA+AGG 0.232662 6_4:+14536467 None:intergenic
GATCATGGACGTCTTGGATA+TGG 0.265747 6_4:-14528523 Msa0978490:CDS
TACTTCTATGAGCTAGTATA+AGG 0.275742 6_4:-14528117 Msa0978490:three_prime_UTR
GAATCTATTCACGATTAAAA+TGG 0.278669 6_4:-14528328 Msa0978490:exon
ATTCTACTATTGCCAAAGTA+TGG 0.320246 6_4:+14528374 None:intergenic
AGGATGGAACTCTGTGGGCT+TGG 0.323798 6_4:-14532544 Msa0978490:CDS
GGATGGAACTCTGTGGGCTT+GGG 0.330883 6_4:-14532543 Msa0978490:CDS
TTCCCATGTTCACATTGTTC+AGG 0.335795 6_4:-14534871 Msa0978490:intron
TCAGGTGAAGATGGTCAATT+AGG 0.343615 6_4:-14536294 Msa0978490:CDS
TCAATTTAGTATTCAGTGTT+TGG 0.352563 6_4:-14528008 Msa0978490:three_prime_UTR
AATATATCATGGGTTGTGTT+TGG 0.354286 6_4:+14528036 None:intergenic
CGTGTTCGTTCTGTTGTTGC+TGG 0.356055 6_4:-14536213 Msa0978490:CDS
GATTAGGCTAATGACTGATT+TGG 0.356758 6_4:-14528292 Msa0978490:three_prime_UTR
GCTTGGGGTAATAATGAATA+TGG 0.358286 6_4:-14532527 Msa0978490:CDS
CACGAGAGACATTATATGTT+TGG 0.371382 6_4:-14527960 Msa0978490:three_prime_UTR
TCAAGACCTTGCACCCGAAC+CGG 0.382884 6_4:+14532617 None:intergenic
TAATGATGTTAGGCGGCTAT+TGG 0.385337 6_4:-14534454 Msa0978490:intron
AGCCGGTGAAGATATTGTTC+AGG 0.389713 6_4:-14529095 Msa0978490:intron
AACAGATTTCAGTCCCGGTT+CGG 0.392138 6_4:-14532631 Msa0978490:CDS
TTGCGGTGGCCGCCATACTT+TGG 0.396183 6_4:-14528386 Msa0978490:CDS
CAGGTATATGGCTGGGGAAG+GGG 0.397756 6_4:-14529190 Msa0978490:CDS
ACAGATTTCAGTCCCGGTTC+GGG 0.399283 6_4:-14532630 Msa0978490:CDS
ACGGTGAAGCTGAGGGAAAT+TGG 0.400414 6_4:-14528426 Msa0978490:CDS
TATTGGTGGGTGGCACTGTT+TGG 0.402907 6_4:-14534437 Msa0978490:CDS
TGTGTGATATGAGGTGTGTT+TGG 0.407826 6_4:-14528258 Msa0978490:three_prime_UTR
GTCAGGTTGAGAGTTGAGTT+TGG 0.409621 6_4:+14536460 None:intergenic
GGAAAGTGCTTTGACTTGGC+TGG 0.411853 6_4:+14534890 None:intergenic
GAACATGGTAGGCTTGGATT+TGG 0.416542 6_4:-14529166 Msa0978490:CDS
CTTATGGTGCAGGTTGCTGC+TGG 0.419803 6_4:-14533109 Msa0978490:intron
GAAGATGGTCAATTAGGAAT+TGG 0.424845 6_4:-14536288 Msa0978490:CDS
GCCACCGCAAGCGACGAGTT+TGG 0.425091 6_4:+14528399 None:intergenic
ATGTAATGTTTGAAAACAAC+AGG 0.431301 6_4:+14536490 None:intergenic
ATGAAAGAGGTCAGTCAGTC+AGG 0.432198 6_4:+14536443 None:intergenic
ATTCATGTGCAAGGACTCTC+TGG 0.435339 6_4:-14532464 Msa0978490:CDS
GAGAGTCCTTGCACATGAAT+AGG 0.435456 6_4:+14532467 None:intergenic
ACATGAATAGGTTGTGATCT+TGG 0.435670 6_4:+14532479 None:intergenic
TGGAAACTAGTAAGTAGATT+AGG 0.436515 6_4:-14528308 Msa0978490:three_prime_UTR
AATTGATGAATAATATATCA+TGG 0.436990 6_4:+14528025 None:intergenic
CCCACAGAGTTCCATCCTCT+TGG 0.443939 6_4:+14532549 None:intergenic
CAGTTTGGGAGAGGTGATCA+TGG 0.445393 6_4:-14528538 Msa0978490:CDS
GACCTTGCCATCATGAGAAA+TGG 0.446180 6_4:+14536173 None:intergenic
ACTTCTATGAGCTAGTATAA+GGG 0.446870 6_4:-14528116 Msa0978490:three_prime_UTR
GAATATGGACAACTTGGAAC+TGG 0.448461 6_4:-14532512 Msa0978490:CDS
AGTAGTTGTTTACATGGGGT+TGG 0.450688 6_4:-14534965 Msa0978490:intron
CAGTAAACAGATTTCAGTCC+CGG 0.458952 6_4:-14532636 Msa0978490:CDS
ATCACGGAAAAGCTTATGCT+TGG 0.459270 6_4:-14534405 Msa0978490:CDS
TCACGGAAAAGCTTATGCTT+GGG 0.459941 6_4:-14534404 Msa0978490:CDS
ATGTCAGGTGGAAATGAATA+TGG 0.468034 6_4:-14533752 Msa0978490:intron
TTACATGGGGTTGGAATCAA+AGG 0.473741 6_4:-14534956 Msa0978490:CDS
TTTGTTTCAGGTATATGGCT+GGG 0.475192 6_4:-14529197 Msa0978490:intron
ACCTGTCGAACAGAAAGCTT+GGG 0.480578 6_4:+14533647 None:intergenic
ATCATGGACGTCTTGGATAT+GGG 0.486500 6_4:-14528522 Msa0978490:CDS
TCAGTCCCGGTTCGGGTGCA+AGG 0.487075 6_4:-14532623 Msa0978490:CDS
GTGTGATATGAGGTGTGTTT+GGG 0.488198 6_4:-14528257 Msa0978490:three_prime_UTR
CCATTGTCATCCTTGCGCTC+AGG 0.489476 6_4:+14533713 None:intergenic
TCCCAAGCTTTCTGTTCGAC+AGG 0.493819 6_4:-14533648 Msa0978490:intron
TGGAATCAAAGGGGAACACT+TGG 0.496055 6_4:-14534945 Msa0978490:CDS
TCACCGAGGTTCTGTGGAGG+AGG 0.496951 6_4:+14528454 None:intergenic
TTCAGGTATATGGCTGGGGA+AGG 0.497256 6_4:-14529192 Msa0978490:intron
ATGACAATGGTAGACCTTTG+AGG 0.499227 6_4:-14533700 Msa0978490:CDS
TACCTGTCGAACAGAAAGCT+TGG 0.500127 6_4:+14533646 None:intergenic
TGCAGGGGTTCAGGTGAAGA+TGG 0.502565 6_4:-14536303 Msa0978490:intron
AGGGGAGAACATGGTAGGCT+TGG 0.504151 6_4:-14529172 Msa0978490:CDS
TTACACGTGAAGGACACGTT+TGG 0.504951 6_4:-14533066 Msa0978490:CDS
CAGTAAAATGTTACCTCAGA+GGG 0.505428 6_4:-14529128 Msa0978490:CDS
TCAGGTATATGGCTGGGGAA+GGG 0.505877 6_4:-14529191 Msa0978490:intron
TCACTCGCCATTTCTCATGA+TGG 0.506189 6_4:-14536180 Msa0978490:CDS
AGAGGTGATCATGGACGTCT+TGG 0.507259 6_4:-14528529 Msa0978490:CDS
GTTATACCAAGCAATGATGT+TGG 0.507792 6_4:+14536393 None:intergenic
TGTGGAGGAGGGATGTCTAT+AGG 0.507801 6_4:+14528466 None:intergenic
GATGGAACTCTGTGGGCTTG+GGG 0.507900 6_4:-14532542 Msa0978490:CDS
TGATGTTAGGCGGCTATTGG+TGG 0.512243 6_4:-14534451 Msa0978490:intron
AGCTTGGGAGCACAAGGCTG+AGG 0.514329 6_4:+14533662 None:intergenic
CATGGGAAAGTGCTTTGACT+TGG 0.515506 6_4:+14534886 None:intergenic
CAAGACCTTGCACCCGAACC+GGG 0.517873 6_4:+14532618 None:intergenic
TGGCTTCCAACATCATTGCT+TGG 0.518232 6_4:-14536399 Msa0978490:intron
TTGTTTCAGGTATATGGCTG+GGG 0.518322 6_4:-14529196 Msa0978490:intron
TACAAACGAAGATAAGGAAT+GGG 0.520349 6_4:-14536265 Msa0978490:CDS
ATACTTTGGCAATAGTAGAA+TGG 0.520870 6_4:-14528372 Msa0978490:CDS
GTGAAGGACACGTTTGGACA+TGG 0.523925 6_4:-14533060 Msa0978490:CDS
AATAATGAATATGGACAACT+TGG 0.524927 6_4:-14532518 Msa0978490:CDS
GAAAGTGCTTTGACTTGGCT+GGG 0.527695 6_4:+14534891 None:intergenic
TCTGTTGCATTAACTCGAGA+TGG 0.528565 6_4:-14528715 Msa0978490:CDS
AATATAAAGCTTATAGCAGT+AGG 0.529605 6_4:-14532593 Msa0978490:CDS
GGCTGGGGAAGGGGAGAACA+TGG 0.531851 6_4:-14529181 Msa0978490:CDS
TTTCAGTCTTCGTTTCAGCT+GGG 0.535956 6_4:+14534919 None:intergenic
TCAATCATCAGTCATTCTCA+TGG 0.536562 6_4:-14536419 Msa0978490:exon
AATTGGTACAAACGAAGATA+AGG 0.537474 6_4:-14536271 Msa0978490:CDS
TCTACTGCATTGACCGATGA+AGG 0.537528 6_4:-14530312 Msa0978490:CDS
TAGATATTGCAGCTGGTGGA+TGG 0.541380 6_4:-14530338 Msa0978490:CDS
TACATGGGGTTGGAATCAAA+GGG 0.545894 6_4:-14534955 Msa0978490:CDS
CTTCTATGAGCTAGTATAAG+GGG 0.549255 6_4:-14528115 Msa0978490:three_prime_UTR
GCCAAACTCGTCGCTTGCGG+TGG 0.551088 6_4:-14528400 Msa0978490:CDS
GTACAAACGAAGATAAGGAA+TGG 0.551842 6_4:-14536266 Msa0978490:CDS
CTCAGTCCATGTGTGATATG+AGG 0.553071 6_4:-14528267 Msa0978490:three_prime_UTR
TACATGTCACCAGGAGGCCA+CGG 0.553266 6_4:+14533031 None:intergenic
CGCCATTTCTCATGATGGCA+AGG 0.556595 6_4:-14536175 Msa0978490:intron
AAAGAGTACCTCTCCTTCAT+CGG 0.560737 6_4:+14530299 None:intergenic
TGACGCTGACGGTGAAGCTG+AGG 0.564303 6_4:-14528434 Msa0978490:CDS
ATACCTGAACAATGTGAACA+TGG 0.567026 6_4:+14534868 None:intergenic
TACCTGAACAATATCTTCAC+CGG 0.570660 6_4:+14529093 None:intergenic
ACTGATGATTGAAATGAAAG+AGG 0.571626 6_4:+14536430 None:intergenic
CCAAGAGGATGGAACTCTGT+GGG 0.572297 6_4:-14532549 Msa0978490:CDS
TCAGCGTCACCGAGGTTCTG+TGG 0.573206 6_4:+14528448 None:intergenic
ATTGATGAATAATATATCAT+GGG 0.575370 6_4:+14528026 None:intergenic
CTATAGGTAGATATTGCAGC+TGG 0.576600 6_4:-14530345 Msa0978490:intron
TATGGGAGGAAAGTCACTAC+TGG 0.579254 6_4:-14528505 Msa0978490:CDS
GATTATTTGCAGTTTGGGAG+AGG 0.579961 6_4:-14528547 Msa0978490:intron
CTGTTGCATTAACTCGAGAT+GGG 0.580576 6_4:-14528714 Msa0978490:CDS
CACCGAGGTTCTGTGGAGGA+GGG 0.583604 6_4:+14528455 None:intergenic
TTTGGACATGGGGTCAGCCG+TGG 0.583851 6_4:-14533048 Msa0978490:CDS
AATTTGGCTCTCCAAGAGGA+TGG 0.586796 6_4:-14532560 Msa0978490:CDS
TGAAGGACACGTTTGGACAT+GGG 0.588108 6_4:-14533059 Msa0978490:CDS
GTTTGTGGTCAGGTGTCCTG+TGG 0.588610 6_4:-14528748 Msa0978490:intron
CAGAACCTCGGTGACGCTGA+CGG 0.589642 6_4:-14528445 Msa0978490:CDS
CACGGAAAAGCTTATGCTTG+GGG 0.589827 6_4:-14534403 Msa0978490:intron
GGGGAAGGGGAGAACATGGT+AGG 0.592220 6_4:-14529177 Msa0978490:CDS
AGTCACTACTGGTCAACCAA+TGG 0.593547 6_4:-14528494 Msa0978490:CDS
TAGGTAGATATTGCAGCTGG+TGG 0.595264 6_4:-14530342 Msa0978490:CDS
ACAGAACGAACACGTTGAGA+AGG 0.596914 6_4:+14536222 None:intergenic
ACAGAAAGCTTGGGAGCACA+AGG 0.597348 6_4:+14533656 None:intergenic
GATGTTAGGCGGCTATTGGT+GGG 0.599434 6_4:-14534450 Msa0978490:intron
ATAGCCAAACTCGTCGCTTG+CGG 0.599853 6_4:-14528403 Msa0978490:CDS
ATCACTATATCTCTCCTCAA+AGG 0.600285 6_4:+14533686 None:intergenic
GACGCTGACGGTGAAGCTGA+GGG 0.611220 6_4:-14528433 Msa0978490:CDS
AGGACTCTCTGGACTTACTG+TGG 0.611498 6_4:-14532453 Msa0978490:intron
ATCCCTCCTCCACAGAACCT+CGG 0.612533 6_4:-14528457 Msa0978490:CDS
TTTGAGTAGTTGTTTACATG+GGG 0.613035 6_4:-14534969 Msa0978490:intron
TGCATTGACCGATGAAGGAG+AGG 0.613276 6_4:-14530307 Msa0978490:intron
GCTTGGGAGCACAAGGCTGA+GGG 0.613601 6_4:+14533663 None:intergenic
TGTGGTCAGGTGTCCTGTGG+AGG 0.619906 6_4:-14528745 Msa0978490:intron
TACCTGAACAATGTGAACAT+GGG 0.620192 6_4:+14534869 None:intergenic
TCACAACCTATTCATGTGCA+AGG 0.620496 6_4:-14532473 Msa0978490:CDS
AACACACCTCATATCACACA+TGG 0.622560 6_4:+14528261 None:intergenic
GAAGGACACGTTTGGACATG+GGG 0.626854 6_4:-14533058 Msa0978490:CDS
CACTACTGGTCAACCAATGG+AGG 0.628294 6_4:-14528491 Msa0978490:CDS
GCAGTAAAATGTTACCTCAG+AGG 0.629500 6_4:-14529129 Msa0978490:CDS
TCATAATTTGGCTCTCCAAG+AGG 0.630349 6_4:-14532564 Msa0978490:CDS
ATGTCTATAGGTACCTCCAT+TGG 0.632178 6_4:+14528478 None:intergenic
AACAGAATGAGTACCTCCAC+AGG 0.635531 6_4:+14528732 None:intergenic
GCTAAAAGTTGAACCCTCTG+AGG 0.641646 6_4:+14529115 None:intergenic
ATGGTGCAGGTTGCTGCTGG+AGG 0.653183 6_4:-14533106 Msa0978490:intron
TGGTGAAGAACCTGAGCGCA+AGG 0.654030 6_4:-14533723 Msa0978490:CDS
TCCAAGAGGATGGAACTCTG+TGG 0.656183 6_4:-14532550 Msa0978490:CDS
GTTAGGCGGCTATTGGTGGG+TGG 0.659658 6_4:-14534447 Msa0978490:intron
CTACTATTGCCAAAGTATGG+CGG 0.668938 6_4:+14528377 None:intergenic
TCAGTGGTACTTACACGTGA+AGG 0.670178 6_4:-14533076 Msa0978490:CDS
TGTTTGGCTGTTGATGATCA+CGG 0.677972 6_4:-14534421 Msa0978490:CDS
CCTGAGCGCAAGGATGACAA+TGG 0.679680 6_4:-14533713 Msa0978490:CDS
GCGTCACCGAGGTTCTGTGG+AGG 0.681198 6_4:+14528451 None:intergenic
GGAAATGAATATGGTCAGTG+TGG 0.705301 6_4:-14533743 Msa0978490:CDS
ATGGACGTCTTGGATATGGG+AGG 0.707741 6_4:-14528519 Msa0978490:CDS
TGCTGGAGGAACTCACTCAG+TGG 0.713322 6_4:-14533092 Msa0978490:CDS
CTTCACCGTCAGCGTCACCG+AGG 0.718373 6_4:+14528440 None:intergenic
ACATGGGGTTGGAATCAAAG+GGG 0.732096 6_4:-14534954 Msa0978490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATATTTAACTAAAAA+AGG + chr6_4:14528337-14528356 None:intergenic 10.0%
!!! CTATAAAATATTTCTAAAAA+TGG + chr6_4:14529684-14529703 None:intergenic 10.0%
!!! ATATTTTACTTTTGAAAAAT+CGG - chr6_4:14530376-14530395 Msa0978490:intron 10.0%
!!! AAAGAATAATTACTAATTTT+AGG - chr6_4:14533127-14533146 Msa0978490:intron 10.0%
!!! ATTATCTATTTTTATCGTTT+TGG - chr6_4:14528369-14528388 Msa0978490:CDS 15.0%
!!! AAAAATAGATAAACTTTTCT+AGG + chr6_4:14528489-14528508 None:intergenic 15.0%
!!! ATTACATAATAAGATGTTTT+CGG - chr6_4:14528644-14528663 Msa0978490:intron 15.0%
!!! AAAATTTATTTTGACATGTT+TGG + chr6_4:14528909-14528928 None:intergenic 15.0%
!!! AAATTGTTTAAATCTTTTGT+TGG - chr6_4:14529381-14529400 Msa0978490:intron 15.0%
!!! AATTGTTTAAATCTTTTGTT+GGG - chr6_4:14529382-14529401 Msa0978490:intron 15.0%
!!! AAAAAGATTTGTAATTTTGT+AGG - chr6_4:14529413-14529432 Msa0978490:intron 15.0%
!!! AAAAGATTTGTAATTTTGTA+GGG - chr6_4:14529414-14529433 Msa0978490:intron 15.0%
!! GTATTAAGTTATTATCAATA+GGG + chr6_4:14533191-14533210 None:intergenic 15.0%
!! TGTATTAAGTTATTATCAAT+AGG + chr6_4:14533192-14533211 None:intergenic 15.0%
!!! TTTTATTAATATTTGCATGA+AGG - chr6_4:14533986-14534005 Msa0978490:intron 15.0%
!! AAAAAATTCATTAAAACCTT+TGG + chr6_4:14534321-14534340 None:intergenic 15.0%
!! ATCTCAATTCAATATTAAAT+TGG - chr6_4:14534372-14534391 Msa0978490:intron 15.0%
!!! TAAAAAATGACATTTTTCAT+TGG - chr6_4:14534872-14534891 Msa0978490:CDS 15.0%
!! TGGAAAAAAAAAAAAATCTA+CGG + chr6_4:14535111-14535130 None:intergenic 15.0%
!!! TAGATTTTTTTTTTTTTCCA+CGG - chr6_4:14535111-14535130 Msa0978490:intron 15.0%
!! ATTGATGAATAATATATCAT+GGG + chr6_4:14536430-14536449 None:intergenic 15.0%
!! AATTGATGAATAATATATCA+TGG + chr6_4:14536431-14536450 None:intergenic 15.0%
!! TCAATAATCAATTCACATAA+TGG + chr6_4:14529954-14529973 None:intergenic 20.0%
!!! GTGTTTTTTTTAATGATGTT+AGG - chr6_4:14529989-14530008 Msa0978490:intron 20.0%
!!! TTTTTTTTAATGATGTTAGG+CGG - chr6_4:14529992-14530011 Msa0978490:intron 20.0%
!! TATAATAAACACAAAGATGA+TGG + chr6_4:14530094-14530113 None:intergenic 20.0%
!!! TTTTCTCAAAAACAAAACAA+AGG + chr6_4:14530881-14530900 None:intergenic 20.0%
!! TTGAGAAAATATCTAGTTAA+TGG - chr6_4:14530892-14530911 Msa0978490:intron 20.0%
!! TGAGAAAATATCTAGTTAAT+GGG - chr6_4:14530893-14530912 Msa0978490:intron 20.0%
!! AAAATTGTACAAACTATAGA+GGG + chr6_4:14531009-14531028 None:intergenic 20.0%
!! TAAAATTGTACAAACTATAG+AGG + chr6_4:14531010-14531029 None:intergenic 20.0%
!!! TTTAAAACATTTTGAATGGA+TGG + chr6_4:14531064-14531083 None:intergenic 20.0%
!! GATATTGTTCTAATTACTTA+TGG - chr6_4:14531328-14531347 Msa0978490:intron 20.0%
!!! GTAATTTTTCTCTTTTTTGA+AGG - chr6_4:14531442-14531461 Msa0978490:intron 20.0%
!! TTTCATGAAAACACAAAAAA+TGG + chr6_4:14531590-14531609 None:intergenic 20.0%
!! AATTTAACAAGTAATGACAT+CGG - chr6_4:14532774-14532793 Msa0978490:intron 20.0%
!! GTATATGTATCCTATAAATA+GGG + chr6_4:14533232-14533251 None:intergenic 20.0%
!! AGTATATGTATCCTATAAAT+AGG + chr6_4:14533233-14533252 None:intergenic 20.0%
!! TAGGATACATATACTTAAAT+AGG - chr6_4:14533238-14533257 Msa0978490:intron 20.0%
!! AGGATACATATACTTAAATA+GGG - chr6_4:14533239-14533258 Msa0978490:intron 20.0%
!! TATACTTAAATAGGGATATT+AGG - chr6_4:14533247-14533266 Msa0978490:intron 20.0%
!! AATTAAGTCAATACAGTTTA+TGG - chr6_4:14533312-14533331 Msa0978490:intron 20.0%
!! TCCTTGTTAATATTATAAAC+AGG - chr6_4:14533483-14533502 Msa0978490:intron 20.0%
!! TCCTGTTTATAATATTAACA+AGG + chr6_4:14533487-14533506 None:intergenic 20.0%
!! TAGATTATACATTACTGAAA+AGG - chr6_4:14533596-14533615 Msa0978490:intron 20.0%
!!! GAAAGTCATATTTAGAATAA+CGG - chr6_4:14533961-14533980 Msa0978490:intron 20.0%
!!! GGTTTTAATGAATTTTTTCA+CGG - chr6_4:14534323-14534342 Msa0978490:intron 20.0%
!! AAATGAAATGACAAAAAGAA+AGG + chr6_4:14534775-14534794 None:intergenic 20.0%
! ATGTAATGTTTGAAAACAAC+AGG + chr6_4:14527966-14527985 None:intergenic 25.0%
!!! GTTAGACATTTTATTTACTG+AGG - chr6_4:14528427-14528446 Msa0978490:CDS 25.0%
!!! ATTCATTTTTAAGGTGTGTT+TGG - chr6_4:14528534-14528553 Msa0978490:CDS 25.0%
!! ATCTAATGCTAAAGTTTGTT+AGG + chr6_4:14528791-14528810 None:intergenic 25.0%
! AAATGATTCTAATTGAAGCT+AGG + chr6_4:14528854-14528873 None:intergenic 25.0%
! GCTTCAATTAGAATCATTTA+TGG - chr6_4:14528855-14528874 Msa0978490:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr6_4:14529000-14529019 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr6_4:14529001-14529020 None:intergenic 25.0%
! GGATAAACAACTTAATCAAA+TGG - chr6_4:14529005-14529024 Msa0978490:intron 25.0%
! AAACTGTTATCAAATCTGAT+TGG + chr6_4:14529184-14529203 None:intergenic 25.0%
! TTAAACTGTTCATTTGAACA+TGG - chr6_4:14529285-14529304 Msa0978490:intron 25.0%
!!! AAAACCACTGTTTTTGTAAA+AGG - chr6_4:14529349-14529368 Msa0978490:intron 25.0%
!!! TTTTGAGTAGTTGTTTACAT+GGG - chr6_4:14529483-14529502 Msa0978490:intron 25.0%
!!! AATAGAAGATTTTAGGAGAA+CGG + chr6_4:14529739-14529758 None:intergenic 25.0%
!! GTGTTTGAATAGAAGATTTT+AGG + chr6_4:14529746-14529765 None:intergenic 25.0%
!!! GACATACCATTTTTTACATT+TGG - chr6_4:14530250-14530269 Msa0978490:intron 25.0%
! TATAAGTGTCATATATACCT+AGG - chr6_4:14530336-14530355 Msa0978490:CDS 25.0%
! TTGTTAAATAGAAGCTATTG+TGG + chr6_4:14530539-14530558 None:intergenic 25.0%
! AAACAAAGGTAAGTCATATT+TGG + chr6_4:14530867-14530886 None:intergenic 25.0%
! AATATCTAGTTAATGGGATA+AGG - chr6_4:14530899-14530918 Msa0978490:intron 25.0%
!!! GAGGTTTAAAACATTTTGAA+TGG + chr6_4:14531068-14531087 None:intergenic 25.0%
! GTTGTTTAATGTGATTATTG+AGG + chr6_4:14531087-14531106 None:intergenic 25.0%
! AGTTGTTTAATATGATTACG+AGG + chr6_4:14531134-14531153 None:intergenic 25.0%
!! CGACTTTATTTATTGCATAA+TGG + chr6_4:14531213-14531232 None:intergenic 25.0%
! CATGATATCAAATATGCATA+TGG + chr6_4:14531288-14531307 None:intergenic 25.0%
! TATCAAATACCAATCTAGAA+AGG + chr6_4:14531312-14531331 None:intergenic 25.0%
!!! TTGATTTCCTTTTATTTCCT+TGG + chr6_4:14531561-14531580 None:intergenic 25.0%
! TTTAGTAACAAACATGTGTA+GGG + chr6_4:14531751-14531770 None:intergenic 25.0%
! AATATAAAGCTTATAGCAGT+AGG - chr6_4:14531860-14531879 Msa0978490:intron 25.0%
! AATAATGAATATGGACAACT+TGG - chr6_4:14531935-14531954 Msa0978490:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr6_4:14529000-14529019 None:intergenic 25.0%
!!! TTTAAGTTGTTTATCCAAAC+AGG + chr6_4:14532139-14532158 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr6_4:14532297-14532316 Msa0978490:intron 25.0%
! TTAAATTCAATCCTTTGTGT+TGG - chr6_4:14532487-14532506 Msa0978490:CDS 25.0%
!! ACTTGTTAAATTGAACTCAT+GGG + chr6_4:14532766-14532785 None:intergenic 25.0%
!! TACTTGTTAAATTGAACTCA+TGG + chr6_4:14532767-14532786 None:intergenic 25.0%
!! TTTATAGTACATGATTTGTG+TGG + chr6_4:14532865-14532884 None:intergenic 25.0%
! AAGGATTCAATTTAGATTAC+GGG + chr6_4:14533539-14533558 None:intergenic 25.0%
! CAAGGATTCAATTTAGATTA+CGG + chr6_4:14533540-14533559 None:intergenic 25.0%
!!! GAAACTATAGAATTTTAGAG+AGG - chr6_4:14533939-14533958 Msa0978490:intron 25.0%
!! CTTAATCTGTTTGAAACTAT+AGG - chr6_4:14534092-14534111 Msa0978490:intron 25.0%
! AGTGTATAACTTTGAATTGA+TGG + chr6_4:14534262-14534281 None:intergenic 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr6_4:14534490-14534509 Msa0978490:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr6_4:14534674-14534693 None:intergenic 25.0%
! CTTGAATCTTGAATTATTCA+AGG - chr6_4:14534799-14534818 Msa0978490:intron 25.0%
! CTTGAATCTTGAATTATTCA+AGG - chr6_4:14534799-14534818 Msa0978490:intron 25.0%
! AATGAGATTCAATTCATGAT+TGG - chr6_4:14535053-14535072 Msa0978490:intron 25.0%
! CAATTCATGATTGGAAAAAT+AGG - chr6_4:14535062-14535081 Msa0978490:intron 25.0%
!!! ATTTTTTTTTTTTTCCACGG+TGG - chr6_4:14535114-14535133 Msa0978490:intron 25.0%
! GTGGAAAGAAAAAAAATCTA+CGG + chr6_4:14535185-14535204 None:intergenic 25.0%
!!! GTAGATTTTTTTTCTTTCCA+CGG - chr6_4:14535184-14535203 Msa0978490:intron 25.0%
!!! ATGTTTTTGTTTCAGGTATA+TGG - chr6_4:14535251-14535270 Msa0978490:intron 25.0%
! TTAACTAAAGTATGTAGCAT+AGG - chr6_4:14535415-14535434 Msa0978490:intron 25.0%
! TATGGCATTATGTAATTCAA+TGG + chr6_4:14535551-14535570 None:intergenic 25.0%
! TTGAATTACATAATGCCATA+AGG - chr6_4:14535551-14535570 Msa0978490:intron 25.0%
! GTTTATGCTGAAATATCTAT+TGG - chr6_4:14535683-14535702 Msa0978490:intron 25.0%
!! GTTTCATTCTGTGAATTTTT+CGG - chr6_4:14535817-14535836 Msa0978490:intron 25.0%
! GAATCTATTCACGATTAAAA+TGG - chr6_4:14536125-14536144 Msa0978490:intron 25.0%
! TCAATTTAGTATTCAGTGTT+TGG - chr6_4:14536445-14536464 Msa0978490:five_prime_UTR 25.0%
ACTGATGATTGAAATGAAAG+AGG + chr6_4:14528026-14528045 None:intergenic 30.0%
CTGCAATCAAAAAGAAAGAA+GGG + chr6_4:14528135-14528154 None:intergenic 30.0%
!! CTTCTTTCTTTTTGATTGCA+GGG - chr6_4:14528134-14528153 Msa0978490:three_prime_UTR 30.0%
!! TTCTTTCTTTTTGATTGCAG+GGG - chr6_4:14528135-14528154 Msa0978490:three_prime_UTR 30.0%
AATTGGTACAAACGAAGATA+AGG - chr6_4:14528182-14528201 Msa0978490:three_prime_UTR 30.0%
TACAAACGAAGATAAGGAAT+GGG - chr6_4:14528188-14528207 Msa0978490:three_prime_UTR 30.0%
! AATCCAAGTTCGATTTTACT+GGG - chr6_4:14528394-14528413 Msa0978490:CDS 30.0%
TGTAATAGAAATGCCATAAG+TGG + chr6_4:14528630-14528649 None:intergenic 30.0%
AAATAGGTTATGTGTGTGTT+TGG - chr6_4:14528688-14528707 Msa0978490:intron 30.0%
! AAAGTGAGTTGAATGTAAAG+TGG - chr6_4:14528754-14528773 Msa0978490:intron 30.0%
ACAAAATCAATTCTACTCGA+GGG - chr6_4:14528880-14528899 Msa0978490:intron 30.0%
GTTATCAAATCTGATTGGAT+TGG + chr6_4:14529179-14529198 None:intergenic 30.0%
! TTCACCTTTTACAAAAACAG+TGG + chr6_4:14529356-14529375 None:intergenic 30.0%
!! GTTTTGAGTAGTTGTTTACA+TGG - chr6_4:14529482-14529501 Msa0978490:intron 30.0%
TTTGAGTAGTTGTTTACATG+GGG - chr6_4:14529484-14529503 Msa0978490:intron 30.0%
AACACCAAAGAAAACAACAT+CGG + chr6_4:14529629-14529648 None:intergenic 30.0%
!!! GTTTTCTTTGGTGTTATATG+AGG - chr6_4:14529634-14529653 Msa0978490:intron 30.0%
!! ATAGAAGATTTTAGGAGAAC+GGG + chr6_4:14529738-14529757 None:intergenic 30.0%
TTTCCATTCCAAAGTTCATA+TGG - chr6_4:14529874-14529893 Msa0978490:intron 30.0%
AACTGAATTGTTCACTTTAG+AGG - chr6_4:14529920-14529939 Msa0978490:intron 30.0%
!! GTGAATTGATTATTGACTTG+TGG - chr6_4:14529958-14529977 Msa0978490:intron 30.0%
! TCATTTTCTGTGACAATAGA+GGG - chr6_4:14530128-14530147 Msa0978490:intron 30.0%
! TCTGATTTTCTGCTTTAACT+AGG - chr6_4:14530228-14530247 Msa0978490:intron 30.0%
GAGAAGCCAAATGTAAAAAA+TGG + chr6_4:14530259-14530278 None:intergenic 30.0%
! TAATGCTGTAGTGTTACTAT+AGG - chr6_4:14530619-14530638 Msa0978490:intron 30.0%
TTCAATCTTTGCATTTGCAT+TGG + chr6_4:14530844-14530863 None:intergenic 30.0%
! TACAATTTTATATGCCGCAT+TGG - chr6_4:14531020-14531039 Msa0978490:intron 30.0%
AATAAAGTCGTACAGTGTTT+AGG - chr6_4:14531223-14531242 Msa0978490:intron 30.0%
! TACAGTGTTTAGGTTTGTAA+TGG - chr6_4:14531233-14531252 Msa0978490:intron 30.0%
ATATCATGACCTTTCTAGAT+TGG - chr6_4:14531300-14531319 Msa0978490:intron 30.0%
AAAGCAACCAAGGAAATAAA+AGG - chr6_4:14531551-14531570 Msa0978490:intron 30.0%
GTTTAGTAACAAACATGTGT+AGG + chr6_4:14531752-14531771 None:intergenic 30.0%
AGTAGGTGCATTTCATAATT+TGG - chr6_4:14531877-14531896 Msa0978490:intron 30.0%
ACAGATAAACAAGATGACTT+TGG + chr6_4:14532041-14532060 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr6_4:14532262-14532281 Msa0978490:intron 30.0%
TATGGAAATAGCTTATGACA+TGG + chr6_4:14532323-14532342 None:intergenic 30.0%
CAAGATAAGTTCACGATTAA+AGG + chr6_4:14532528-14532547 None:intergenic 30.0%
GATGTTATGTTTGTGTATTC+AGG - chr6_4:14532583-14532602 Msa0978490:CDS 30.0%
TTGTGTATTCAGGTATGTTA+TGG - chr6_4:14532593-14532612 Msa0978490:CDS 30.0%
TATTCAGGTATGTTATGGTT+TGG - chr6_4:14532598-14532617 Msa0978490:CDS 30.0%
ATTCAGGTATGTTATGGTTT+GGG - chr6_4:14532599-14532618 Msa0978490:CDS 30.0%
TGATGTAATTACTATGCACA+TGG - chr6_4:14532628-14532647 Msa0978490:CDS 30.0%
!!! TTAAACATTTTTTGCCGAAG+AGG - chr6_4:14532902-14532921 Msa0978490:intron 30.0%
AAGTTGTGTATTGAATGCAT+TGG - chr6_4:14533081-14533100 Msa0978490:CDS 30.0%
AAGCACTAATCCCTATTTAT+AGG - chr6_4:14533219-14533238 Msa0978490:intron 30.0%
AGGATTCAATTTAGATTACG+GGG + chr6_4:14533538-14533557 None:intergenic 30.0%
ATTGAATCCTTGTCAAACAT+AGG - chr6_4:14533548-14533567 Msa0978490:intron 30.0%
GAAGTACATGATAAATTACG+TGG - chr6_4:14533659-14533678 Msa0978490:CDS 30.0%
AGGCAACTAACAAGAAAATT+GGG + chr6_4:14533698-14533717 None:intergenic 30.0%
! TCAAAAAATTGAAGTGCCAA+AGG - chr6_4:14534302-14534321 Msa0978490:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr6_4:14534486-14534505 None:intergenic 30.0%
AACCATTAGAAAGGATTTAG+AGG + chr6_4:14534530-14534549 None:intergenic 30.0%
CATTAGAGAAACCATTAGAA+AGG + chr6_4:14534539-14534558 None:intergenic 30.0%
CTTTCTAATGGTTTCTCTAA+TGG - chr6_4:14534537-14534556 Msa0978490:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr6_4:14534547-14534566 Msa0978490:intron 30.0%
TGTTAGAAGAGTAGATCAAA+TGG + chr6_4:14534605-14534624 None:intergenic 30.0%
AAATAGGCTTAGATATGGTT+TGG + chr6_4:14534658-14534677 None:intergenic 30.0%
GTAGAAAATAGGCTTAGATA+TGG + chr6_4:14534663-14534682 None:intergenic 30.0%
ACACACTATAGTAGAAAAGT+TGG + chr6_4:14534685-14534704 None:intergenic 30.0%
TGAAATGACAAAAAGAAAGG+TGG + chr6_4:14534772-14534791 None:intergenic 30.0%
! GCGTTTTTCCAATGAAAAAT+AGG - chr6_4:14535136-14535155 Msa0978490:intron 30.0%
!! TTGGGATACCTATTTTTCAT+TGG + chr6_4:14535147-14535166 None:intergenic 30.0%
GTATTATAGTCTACTCTCAT+TGG + chr6_4:14535220-14535239 None:intergenic 30.0%
!! TTTGCTGATGTTTTTGTTTC+AGG - chr6_4:14535244-14535263 Msa0978490:intron 30.0%
!! CTGAAATATCTATTGGTTTG+TGG - chr6_4:14535690-14535709 Msa0978490:intron 30.0%
TCACAGAATGAAACAAAACA+TGG + chr6_4:14535811-14535830 None:intergenic 30.0%
ATAAGAAATGCATCTCAGAA+GGG + chr6_4:14535858-14535877 None:intergenic 30.0%
AATAAGAAATGCATCTCAGA+AGG + chr6_4:14535859-14535878 None:intergenic 30.0%
TGATGTGATTATTTGCAGTT+TGG - chr6_4:14535900-14535919 Msa0978490:intron 30.0%
GATGTGATTATTTGCAGTTT+GGG - chr6_4:14535901-14535920 Msa0978490:intron 30.0%
ATTCTACTATTGCCAAAGTA+TGG + chr6_4:14536082-14536101 None:intergenic 30.0%
ATACTTTGGCAATAGTAGAA+TGG - chr6_4:14536081-14536100 Msa0978490:intron 30.0%
TGGAAACTAGTAAGTAGATT+AGG - chr6_4:14536145-14536164 Msa0978490:intron 30.0%
TACTTCTATGAGCTAGTATA+AGG - chr6_4:14536336-14536355 Msa0978490:intron 30.0%
ACTTCTATGAGCTAGTATAA+GGG - chr6_4:14536337-14536356 Msa0978490:intron 30.0%
! AATATATCATGGGTTGTGTT+TGG + chr6_4:14536420-14536439 None:intergenic 30.0%
TGAGAGTTGAGTTTGGATTA+AGG + chr6_4:14527989-14528008 None:intergenic 35.0%
TCAATCATCAGTCATTCTCA+TGG - chr6_4:14528034-14528053 Msa0978490:three_prime_UTR 35.0%
GTTATACCAAGCAATGATGT+TGG + chr6_4:14528063-14528082 None:intergenic 35.0%
CCTGCAATCAAAAAGAAAGA+AGG + chr6_4:14528136-14528155 None:intergenic 35.0%
!! CCTTCTTTCTTTTTGATTGC+AGG - chr6_4:14528133-14528152 Msa0978490:three_prime_UTR 35.0%
GAAGATGGTCAATTAGGAAT+TGG - chr6_4:14528165-14528184 Msa0978490:three_prime_UTR 35.0%
GTACAAACGAAGATAAGGAA+TGG - chr6_4:14528187-14528206 Msa0978490:three_prime_UTR 35.0%
! GAATCCAAGTTCGATTTTAC+TGG - chr6_4:14528393-14528412 Msa0978490:CDS 35.0%
AGCCCTGAAAATTCAAAGTT+CGG + chr6_4:14528453-14528472 None:intergenic 35.0%
!! AACTTTGAATTTTCAGGGCT+TGG - chr6_4:14528453-14528472 Msa0978490:CDS 35.0%
! GACTTGTTTGAGTTTGTCTA+CGG - chr6_4:14528560-14528579 Msa0978490:intron 35.0%
GAGTTTGTGAAAACCACTTA+TGG - chr6_4:14528614-14528633 Msa0978490:intron 35.0%
ACACGGTAGCTTATGTAAAT+AGG - chr6_4:14528672-14528691 Msa0978490:intron 35.0%
GACAAAATCAATTCTACTCG+AGG - chr6_4:14528879-14528898 Msa0978490:intron 35.0%
TACACCTGCATATTCAATTC+TGG - chr6_4:14528928-14528947 Msa0978490:intron 35.0%
CATAAGTTGTAGCCTATGTT+TGG + chr6_4:14528971-14528990 None:intergenic 35.0%
AGACTGTTTGAGAAGTCTTA+TGG + chr6_4:14529120-14529139 None:intergenic 35.0%
AACAGTCTTACAAGTGCTTA+TGG - chr6_4:14529132-14529151 Msa0978490:CDS 35.0%
TACCTGAACAATGTGAACAT+GGG + chr6_4:14529587-14529606 None:intergenic 35.0%
ATACCTGAACAATGTGAACA+TGG + chr6_4:14529588-14529607 None:intergenic 35.0%
!! GATTTTGTTCTAGATGCCAT+AGG - chr6_4:14529813-14529832 Msa0978490:intron 35.0%
!! GAACTTTGGAATGGAAACAA+TGG + chr6_4:14529871-14529890 None:intergenic 35.0%
AAACTCCACCATATGAACTT+TGG + chr6_4:14529885-14529904 None:intergenic 35.0%
!! AAGTTCATATGGTGGAGTTT+TGG - chr6_4:14529885-14529904 Msa0978490:intron 35.0%
ACAATTCAGTTTGTAGCAGA+TGG + chr6_4:14529911-14529930 None:intergenic 35.0%
! TAAACACAAAGATGATGGTG+TGG + chr6_4:14530089-14530108 None:intergenic 35.0%
! CTCATTTTCTGTGACAATAG+AGG - chr6_4:14530127-14530146 Msa0978490:intron 35.0%
CAATGTCATTAAACACGATG+TGG - chr6_4:14530198-14530217 Msa0978490:intron 35.0%
GTCATATATACCTAGGTCAT+AGG - chr6_4:14530343-14530362 Msa0978490:intron 35.0%
ATGTCAGGTGGAAATGAATA+TGG - chr6_4:14530701-14530720 Msa0978490:intron 35.0%
ATCACTATATCTCTCCTCAA+AGG + chr6_4:14530770-14530789 None:intergenic 35.0%
!! GCTTTGAGAGAGTAGTTAAA+TGG + chr6_4:14530962-14530981 None:intergenic 35.0%
TCTCTCAAAGCTTCATAGAA+TGG - chr6_4:14530971-14530990 Msa0978490:intron 35.0%
GTTCTAATTACTTATGGTGC+AGG - chr6_4:14531334-14531353 Msa0978490:intron 35.0%
AAAAATTACATGTCACCAGG+AGG + chr6_4:14531431-14531450 None:intergenic 35.0%
GAGAAAAATTACATGTCACC+AGG + chr6_4:14531434-14531453 None:intergenic 35.0%
GATGAAGAGAATGACTTACA+AGG - chr6_4:14531486-14531505 Msa0978490:intron 35.0%
AACAAAACAGAAAGCAACCA+AGG - chr6_4:14531541-14531560 Msa0978490:intron 35.0%
AACAAACATGTGTAGGGATT+GGG + chr6_4:14531745-14531764 None:intergenic 35.0%
TAACAAACATGTGTAGGGAT+TGG + chr6_4:14531746-14531765 None:intergenic 35.0%
GCTTGGGGTAATAATGAATA+TGG - chr6_4:14531926-14531945 Msa0978490:intron 35.0%
ACATGAATAGGTTGTGATCT+TGG + chr6_4:14531977-14531996 None:intergenic 35.0%
!! ATGTACTTCTGAGACTGTTT+GGG + chr6_4:14532352-14532371 None:intergenic 35.0%
!! TATGTACTTCTGAGACTGTT+TGG + chr6_4:14532353-14532372 None:intergenic 35.0%
TCAGTAGATCAGCTCAAATA+AGG - chr6_4:14532375-14532394 Msa0978490:intron 35.0%
AATCCAAACATTCCCTATGT+GGG - chr6_4:14532399-14532418 Msa0978490:intron 35.0%
CATGTAATTAACCCCACATA+GGG + chr6_4:14532414-14532433 None:intergenic 35.0%
! GTCTGATAATGTTTCATCCT+TGG - chr6_4:14532816-14532835 Msa0978490:intron 35.0%
! GTACATCCAGTCGATTTATT+TGG - chr6_4:14533334-14533353 Msa0978490:intron 35.0%
CTCAACACAATTTCATGCAT+AGG - chr6_4:14533357-14533376 Msa0978490:intron 35.0%
!!! ATCTAGCTATTTTAGCCATG+TGG + chr6_4:14533388-14533407 None:intergenic 35.0%
TTGCCTTCAAATACTCGTAT+CGG + chr6_4:14533513-14533532 None:intergenic 35.0%
GGATTCAATTTAGATTACGG+GGG + chr6_4:14533537-14533556 None:intergenic 35.0%
CTAACATCCTATGTTTGACA+AGG + chr6_4:14533558-14533577 None:intergenic 35.0%
GATAAATTACGTGGCTAAGT+TGG - chr6_4:14533668-14533687 Msa0978490:CDS 35.0%
GAGGCAACTAACAAGAAAAT+TGG + chr6_4:14533699-14533718 None:intergenic 35.0%
AACTCAATGTAGCCAAATAG+CGG + chr6_4:14533893-14533912 None:intergenic 35.0%
ATTTGGCTACATTGAGTTTC+TGG - chr6_4:14533895-14533914 Msa0978490:intron 35.0%
! CACGCTACAAATTTTCTACA+TGG + chr6_4:14534223-14534242 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr6_4:14534506-14534525 None:intergenic 35.0%
GACCTCTAAATCCTTTCTAA+TGG - chr6_4:14534525-14534544 Msa0978490:intron 35.0%
TAGAAGAGTAGATCAAATGG+AGG + chr6_4:14534602-14534621 None:intergenic 35.0%
TCTTCTAACAACGACATCTA+CGG - chr6_4:14534615-14534634 Msa0978490:intron 35.0%
ATTACACTAGGTTTAGGTAG+TGG + chr6_4:14534746-14534765 None:intergenic 35.0%
TGGTTGATTACACTAGGTTT+AGG + chr6_4:14534752-14534771 None:intergenic 35.0%
CGGTTATCACATAGTCAATT+GGG + chr6_4:14535091-14535110 None:intergenic 35.0%
ACGGTTATCACATAGTCAAT+TGG + chr6_4:14535092-14535111 None:intergenic 35.0%
CGGTTATCACATAGTCAATT+GGG + chr6_4:14535091-14535110 None:intergenic 35.0%
ACGGTTATCACATAGTCAAT+TGG + chr6_4:14535092-14535111 None:intergenic 35.0%
!!! GATTTTTTTTCTTTCCACGG+TGG - chr6_4:14535187-14535206 Msa0978490:intron 35.0%
!! TTTTGTTTCAGGTATATGGC+TGG - chr6_4:14535255-14535274 Msa0978490:intron 35.0%
! TTTGTTTCAGGTATATGGCT+GGG - chr6_4:14535256-14535275 Msa0978490:intron 35.0%
CAGTAAAATGTTACCTCAGA+GGG - chr6_4:14535325-14535344 Msa0978490:intron 35.0%
TACCTGAACAATATCTTCAC+CGG + chr6_4:14535363-14535382 None:intergenic 35.0%
TAGTTAAAAACCGATCAGAG+TGG + chr6_4:14535402-14535421 None:intergenic 35.0%
AGTATGTAGCATAGGTATCA+TGG - chr6_4:14535423-14535442 Msa0978490:intron 35.0%
!! TTAGAAAGCGCTATTTGTGA+AGG + chr6_4:14535488-14535507 None:intergenic 35.0%
GTCACTAAGCTAAAACCTTA+TGG + chr6_4:14535569-14535588 None:intergenic 35.0%
!! ATATCTATTGGTTTGTGGTC+AGG - chr6_4:14535695-14535714 Msa0978490:intron 35.0%
CATGGCAAAGAAAATTGAGA+TGG + chr6_4:14535793-14535812 None:intergenic 35.0%
GATTAGGCTAATGACTGATT+TGG - chr6_4:14536161-14536180 Msa0978490:intron 35.0%
CTTCTATGAGCTAGTATAAG+GGG - chr6_4:14536338-14536357 Msa0978490:intron 35.0%
CACGAGAGACATTATATGTT+TGG - chr6_4:14536493-14536512 Msa0978490:five_prime_UTR 35.0%
TCAGGTGAAGATGGTCAATT+AGG - chr6_4:14528159-14528178 Msa0978490:three_prime_UTR 40.0%
! AGGCCGAACTTTGAATTTTC+AGG - chr6_4:14528447-14528466 Msa0978490:CDS 40.0%
! GGCCGAACTTTGAATTTTCA+GGG - chr6_4:14528448-14528467 Msa0978490:CDS 40.0%
!! TTTGAATTTTCAGGGCTTGG+AGG - chr6_4:14528456-14528475 Msa0978490:CDS 40.0%
!! TTGAATTTTCAGGGCTTGGA+GGG - chr6_4:14528457-14528476 Msa0978490:CDS 40.0%
! AGATGTTTTCGGCTTCTACA+CGG - chr6_4:14528655-14528674 Msa0978490:intron 40.0%
!! TATGTGTGTGTTTGGTTCTG+CGG - chr6_4:14528696-14528715 Msa0978490:intron 40.0%
ACTTATGTGAATGCCCTGTT+TGG - chr6_4:14528984-14529003 Msa0978490:intron 40.0%
! ACATGGCCTTAGTCCTATAT+TGG - chr6_4:14529302-14529321 Msa0978490:intron 40.0%
! CATGGCCTTAGTCCTATATT+GGG - chr6_4:14529303-14529322 Msa0978490:intron 40.0%
AGTAGTTGTTTACATGGGGT+TGG - chr6_4:14529488-14529507 Msa0978490:intron 40.0%
TTACATGGGGTTGGAATCAA+AGG - chr6_4:14529497-14529516 Msa0978490:intron 40.0%
TACATGGGGTTGGAATCAAA+GGG - chr6_4:14529498-14529517 Msa0978490:intron 40.0%
TTTCAGTCTTCGTTTCAGCT+GGG + chr6_4:14529537-14529556 None:intergenic 40.0%
! TTTTCAGTCTTCGTTTCAGC+TGG + chr6_4:14529538-14529557 None:intergenic 40.0%
TTCCCATGTTCACATTGTTC+AGG - chr6_4:14529582-14529601 Msa0978490:intron 40.0%
!! AAGATTTTAGGAGAACGGGA+AGG + chr6_4:14529734-14529753 None:intergenic 40.0%
! CACTTGTTAAACACTAGCCA+TGG - chr6_4:14529775-14529794 Msa0978490:intron 40.0%
TTGTTAAACACTAGCCATGG+CGG - chr6_4:14529778-14529797 Msa0978490:intron 40.0%
! CCACCATATGAACTTTGGAA+TGG + chr6_4:14529880-14529899 None:intergenic 40.0%
CCATTCCAAAGTTCATATGG+TGG - chr6_4:14529877-14529896 Msa0978490:intron 40.0%
TAATGATGTTAGGCGGCTAT+TGG - chr6_4:14529999-14530018 Msa0978490:intron 40.0%
!! TGTTTGGCTGTTGATGATCA+CGG - chr6_4:14530032-14530051 Msa0978490:intron 40.0%
ATCACGGAAAAGCTTATGCT+TGG - chr6_4:14530048-14530067 Msa0978490:intron 40.0%
TCACGGAAAAGCTTATGCTT+GGG - chr6_4:14530049-14530068 Msa0978490:intron 40.0%
AATGACATTGCCACGTTGAA+GGG + chr6_4:14530188-14530207 None:intergenic 40.0%
TAATGACATTGCCACGTTGA+AGG + chr6_4:14530189-14530208 None:intergenic 40.0%
CTATAGTACACCTATGACCT+AGG + chr6_4:14530356-14530375 None:intergenic 40.0%
GAGCAGATATACTTGATGTC+AGG - chr6_4:14530686-14530705 Msa0978490:intron 40.0%
CAGATATACTTGATGTCAGG+TGG - chr6_4:14530689-14530708 Msa0978490:intron 40.0%
GGAAATGAATATGGTCAGTG+TGG - chr6_4:14530710-14530729 Msa0978490:intron 40.0%
ATGACAATGGTAGACCTTTG+AGG - chr6_4:14530753-14530772 Msa0978490:intron 40.0%
CTAGTTAATGGGATAAGGCT+TGG - chr6_4:14530904-14530923 Msa0978490:intron 40.0%
GTACTCTTATTGCACCAATG+CGG + chr6_4:14531037-14531056 None:intergenic 40.0%
TACGAGGCTTATGCATAAGA+TGG + chr6_4:14531118-14531137 None:intergenic 40.0%
ATGACTTACAAGGAGACAGT+AGG - chr6_4:14531496-14531515 Msa0978490:intron 40.0%
CAGTAAACAGATTTCAGTCC+CGG - chr6_4:14531817-14531836 Msa0978490:intron 40.0%
!! TCATAATTTGGCTCTCCAAG+AGG - chr6_4:14531889-14531908 Msa0978490:intron 40.0%
GAATATGGACAACTTGGAAC+TGG - chr6_4:14531941-14531960 Msa0978490:intron 40.0%
TCACAACCTATTCATGTGCA+AGG - chr6_4:14531980-14531999 Msa0978490:intron 40.0%
AAGCTATCTTGGTAAGCTTG+TGG - chr6_4:14532273-14532292 Msa0978490:intron 40.0%
AGCTATCTTGGTAAGCTTGT+GGG - chr6_4:14532274-14532293 Msa0978490:intron 40.0%
CAATCCAAACATTCCCTATG+TGG - chr6_4:14532398-14532417 Msa0978490:intron 40.0%
ATCCAAACATTCCCTATGTG+GGG - chr6_4:14532400-14532419 Msa0978490:intron 40.0%
CCATGTAATTAACCCCACAT+AGG + chr6_4:14532415-14532434 None:intergenic 40.0%
CCTATGTGGGGTTAATTACA+TGG - chr6_4:14532412-14532431 Msa0978490:intron 40.0%
AAGTAATGACATCGGTGAGA+CGG - chr6_4:14532782-14532801 Msa0978490:intron 40.0%
!!! ACATTTTTTGCCGAAGAGGT+TGG - chr6_4:14532906-14532925 Msa0978490:intron 40.0%
ACAGTACCTATTGTTACCAC+TGG + chr6_4:14532932-14532951 None:intergenic 40.0%
!! AAAGTGCTTAAAAAGTGCCC+CGG + chr6_4:14533040-14533059 None:intergenic 40.0%
GTTGAGCCAAATAAATCGAC+TGG + chr6_4:14533343-14533362 None:intergenic 40.0%
TTGCCGATACGAGTATTTGA+AGG - chr6_4:14533507-14533526 Msa0978490:intron 40.0%
TTCCCTTTCTAATGCTCAAG+AGG - chr6_4:14533630-14533649 Msa0978490:intron 40.0%
TGCCTCTTGAGCATTAGAAA+GGG + chr6_4:14533635-14533654 None:intergenic 40.0%
TTGCCTCTTGAGCATTAGAA+AGG + chr6_4:14533636-14533655 None:intergenic 40.0%
ATCCACAATTGACAACACTG+AGG + chr6_4:14533718-14533737 None:intergenic 40.0%
TTGTGGATCGCAGAAAATAG+CGG - chr6_4:14533730-14533749 Msa0978490:CDS 40.0%
ATTGTGGAACTATAGCGTAG+TGG + chr6_4:14533868-14533887 None:intergenic 40.0%
CTATAGGTAGATATTGCAGC+TGG - chr6_4:14534108-14534127 Msa0978490:intron 40.0%
!! AAAGAGTACCTCTCCTTCAT+CGG + chr6_4:14534157-14534176 None:intergenic 40.0%
ACACTATCTTGCGATGTTCA+TGG - chr6_4:14534277-14534296 Msa0978490:intron 40.0%
GGATTTAGAGGTCAATGAGT+TGG + chr6_4:14534518-14534537 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr6_4:14534577-14534596 None:intergenic 40.0%
CTTCTAACAACGACATCTAC+GGG - chr6_4:14534616-14534635 Msa0978490:intron 40.0%
! TAGGTAGTGGTTCATTCGTA+CGG + chr6_4:14534733-14534752 None:intergenic 40.0%
GAAAGGTGGTTGATTACACT+AGG + chr6_4:14534758-14534777 None:intergenic 40.0%
! TTGTTTCAGGTATATGGCTG+GGG - chr6_4:14535257-14535276 Msa0978490:intron 40.0%
GCAGTAAAATGTTACCTCAG+AGG - chr6_4:14535324-14535343 Msa0978490:intron 40.0%
CTGTAACTATCCACTCTGAT+CGG - chr6_4:14535389-14535408 Msa0978490:intron 40.0%
TCTGTTGCATTAACTCGAGA+TGG - chr6_4:14535738-14535757 Msa0978490:intron 40.0%
CTGTTGCATTAACTCGAGAT+GGG - chr6_4:14535739-14535758 Msa0978490:intron 40.0%
! ATGGGCGCATATTTTCTGTA+CGG - chr6_4:14535757-14535776 Msa0978490:intron 40.0%
CAGAAGGGCTGATATAACAT+TGG + chr6_4:14535843-14535862 None:intergenic 40.0%
GATTATTTGCAGTTTGGGAG+AGG - chr6_4:14535906-14535925 Msa0978490:intron 40.0%
ATCATGGACGTCTTGGATAT+GGG - chr6_4:14535931-14535950 Msa0978490:intron 40.0%
ATGTCTATAGGTACCTCCAT+TGG + chr6_4:14535978-14535997 None:intergenic 40.0%
CTACTATTGCCAAAGTATGG+CGG + chr6_4:14536079-14536098 None:intergenic 40.0%
AACACACCTCATATCACACA+TGG + chr6_4:14536195-14536214 None:intergenic 40.0%
TGTGTGATATGAGGTGTGTT+TGG - chr6_4:14536195-14536214 Msa0978490:CDS 40.0%
GTGTGATATGAGGTGTGTTT+GGG - chr6_4:14536196-14536215 Msa0978490:CDS 40.0%
!! GTCAGGTTGAGAGTTGAGTT+TGG + chr6_4:14527996-14528015 None:intergenic 45.0%
ATGAAAGAGGTCAGTCAGTC+AGG + chr6_4:14528013-14528032 None:intergenic 45.0%
TGGCTTCCAACATCATTGCT+TGG - chr6_4:14528054-14528073 Msa0978490:three_prime_UTR 45.0%
!! CTTTTTGATTGCAGGGGTTC+AGG - chr6_4:14528141-14528160 Msa0978490:three_prime_UTR 45.0%
ACAGAACGAACACGTTGAGA+AGG + chr6_4:14528234-14528253 None:intergenic 45.0%
TCACTCGCCATTTCTCATGA+TGG - chr6_4:14528273-14528292 Msa0978490:three_prime_UTR 45.0%
GACCTTGCCATCATGAGAAA+TGG + chr6_4:14528283-14528302 None:intergenic 45.0%
CCACCCAGTAAAATCGAACT+TGG + chr6_4:14528400-14528419 None:intergenic 45.0%
! CCAAGTTCGATTTTACTGGG+TGG - chr6_4:14528397-14528416 Msa0978490:CDS 45.0%
GCAGCCAGAATTGAATATGC+AGG + chr6_4:14528935-14528954 None:intergenic 45.0%
! CCTATGTTTGGTTCCACGTT+TGG + chr6_4:14528959-14528978 None:intergenic 45.0%
CCAAACGTGGAACCAAACAT+AGG - chr6_4:14528956-14528975 Msa0978490:intron 45.0%
!! AGACTAAGAGCGCCCAATAT+AGG + chr6_4:14529318-14529337 None:intergenic 45.0%
ACATGGGGTTGGAATCAAAG+GGG - chr6_4:14529499-14529518 Msa0978490:intron 45.0%
TGGAATCAAAGGGGAACACT+TGG - chr6_4:14529508-14529527 Msa0978490:intron 45.0%
!! GAAAGTGCTTTGACTTGGCT+GGG + chr6_4:14529565-14529584 None:intergenic 45.0%
!! CATGGGAAAGTGCTTTGACT+TGG + chr6_4:14529570-14529589 None:intergenic 45.0%
AGAAAACAACATCGGCACGA+TGG + chr6_4:14529621-14529640 None:intergenic 45.0%
!!! CGTGCCGATGTTGTTTTCTT+TGG - chr6_4:14529622-14529641 Msa0978490:intron 45.0%
CACGGAAAAGCTTATGCTTG+GGG - chr6_4:14530050-14530069 Msa0978490:intron 45.0%
AGTGAAATGACCCTTCAACG+TGG - chr6_4:14530175-14530194 Msa0978490:intron 45.0%
ACTACAGCATTACAGCGTAG+CGG + chr6_4:14530611-14530630 None:intergenic 45.0%
ACCTGTCGAACAGAAAGCTT+GGG + chr6_4:14530809-14530828 None:intergenic 45.0%
TACCTGTCGAACAGAAAGCT+TGG + chr6_4:14530810-14530829 None:intergenic 45.0%
TCAGTGGTACTTACACGTGA+AGG - chr6_4:14531377-14531396 Msa0978490:intron 45.0%
TTACACGTGAAGGACACGTT+TGG - chr6_4:14531387-14531406 Msa0978490:intron 45.0%
TGAAGGACACGTTTGGACAT+GGG - chr6_4:14531394-14531413 Msa0978490:intron 45.0%
AACAGATTTCAGTCCCGGTT+CGG - chr6_4:14531822-14531841 Msa0978490:intron 45.0%
!! AATTTGGCTCTCCAAGAGGA+TGG - chr6_4:14531893-14531912 Msa0978490:intron 45.0%
GAGAGTCCTTGCACATGAAT+AGG + chr6_4:14531989-14532008 None:intergenic 45.0%
ATTCATGTGCAAGGACTCTC+TGG - chr6_4:14531989-14532008 Msa0978490:intron 45.0%
!! TTAGTGGGAAAAGGCATTGG+TGG + chr6_4:14532113-14532132 None:intergenic 45.0%
! ACCAATGCCTTTTCCCACTA+AGG - chr6_4:14532112-14532131 Msa0978490:intron 45.0%
TATCCAAACAGGGCCTTAGT+GGG + chr6_4:14532128-14532147 None:intergenic 45.0%
TTATCCAAACAGGGCCTTAG+TGG + chr6_4:14532129-14532148 None:intergenic 45.0%
AGACTGTTTGGGAGAGCTTA+TGG + chr6_4:14532341-14532360 None:intergenic 45.0%
AACCCCACATAGGGAATGTT+TGG + chr6_4:14532405-14532424 None:intergenic 45.0%
TACACAGCAGACCAACACAA+AGG + chr6_4:14532501-14532520 None:intergenic 45.0%
AGTAATGACATCGGTGAGAC+GGG - chr6_4:14532783-14532802 Msa0978490:intron 45.0%
! GCACTTACGCTTTTACACCA+AGG + chr6_4:14532836-14532855 None:intergenic 45.0%
!! AAGTGCTTAAAAAGTGCCCC+GGG + chr6_4:14533039-14533058 None:intergenic 45.0%
AGGACATGAAGCTGTGAGTA+GGG + chr6_4:14533467-14533486 None:intergenic 45.0%
AAGGACATGAAGCTGTGAGT+AGG + chr6_4:14533468-14533487 None:intergenic 45.0%
TGCCTCAGTGTTGTCAATTG+TGG - chr6_4:14533713-14533732 Msa0978490:CDS 45.0%
GTTCCACAATAGCCGCTATT+TGG - chr6_4:14533878-14533897 Msa0978490:intron 45.0%
TAGCCAAATAGCGGCTATTG+TGG + chr6_4:14533884-14533903 None:intergenic 45.0%
TGTTACAGAAGACACGACAC+TGG - chr6_4:14534012-14534031 Msa0978490:intron 45.0%
TAGGTAGATATTGCAGCTGG+TGG - chr6_4:14534111-14534130 Msa0978490:intron 45.0%
TAGATATTGCAGCTGGTGGA+TGG - chr6_4:14534115-14534134 Msa0978490:intron 45.0%
! TCTACTGCATTGACCGATGA+AGG - chr6_4:14534141-14534160 Msa0978490:intron 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr6_4:14534436-14534455 Msa0978490:CDS 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr6_4:14534437-14534456 Msa0978490:CDS 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr6_4:14534583-14534602 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr6_4:14534593-14534612 None:intergenic 45.0%
GTGGTTCATTCGTACGGATT+GGG + chr6_4:14534727-14534746 None:intergenic 45.0%
AGTGGTTCATTCGTACGGAT+TGG + chr6_4:14534728-14534747 None:intergenic 45.0%
GAACATGGTAGGCTTGGATT+TGG - chr6_4:14535287-14535306 Msa0978490:intron 45.0%
GCTAAAAGTTGAACCCTCTG+AGG + chr6_4:14535341-14535360 None:intergenic 45.0%
! CAGAGGGTTCAACTTTTAGC+CGG - chr6_4:14535341-14535360 Msa0978490:intron 45.0%
AGCCGGTGAAGATATTGTTC+AGG - chr6_4:14535358-14535377 Msa0978490:intron 45.0%
GTAGCATAGGTATCATGGCT+AGG - chr6_4:14535428-14535447 Msa0978490:intron 45.0%
AGAGAGAACTTCGTCTCTTG+AGG + chr6_4:14535610-14535629 None:intergenic 45.0%
TCAAGAGACGAAGTTCTCTC+TGG - chr6_4:14535609-14535628 Msa0978490:intron 45.0%
CAAGAGACGAAGTTCTCTCT+GGG - chr6_4:14535610-14535629 Msa0978490:intron 45.0%
AACAGAATGAGTACCTCCAC+AGG + chr6_4:14535724-14535743 None:intergenic 45.0%
GATCATGGACGTCTTGGATA+TGG - chr6_4:14535930-14535949 Msa0978490:intron 45.0%
TATGGGAGGAAAGTCACTAC+TGG - chr6_4:14535948-14535967 Msa0978490:intron 45.0%
AGTCACTACTGGTCAACCAA+TGG - chr6_4:14535959-14535978 Msa0978490:intron 45.0%
CTCAGTCCATGTGTGATATG+AGG - chr6_4:14536186-14536205 Msa0978490:CDS 45.0%
!!! AAAATGAATAAATTTTTTAT+AGG + chr6_4:14528523-14528542 None:intergenic 5.0%
!!! AAAAAATTTATTCATTTTTA+AGG - chr6_4:14528525-14528544 Msa0978490:CDS 5.0%
!! AATATTTAATATTATTGATA+AGG - chr6_4:14532995-14533014 Msa0978490:intron 5.0%
!! ATATTTAATATTATTGATAA+GGG - chr6_4:14532996-14533015 Msa0978490:intron 5.0%
CGTGTTCGTTCTGTTGTTGC+TGG - chr6_4:14528240-14528259 Msa0978490:three_prime_UTR 50.0%
CGCCATTTCTCATGATGGCA+AGG - chr6_4:14528278-14528297 Msa0978490:three_prime_UTR 50.0%
AGTTTGTCTACGGACGTGAC+AGG - chr6_4:14528570-14528589 Msa0978490:intron 50.0%
! AATTCTGGCTGCTCCAAACG+TGG - chr6_4:14528943-14528962 Msa0978490:intron 50.0%
GAGCGCCCAATATAGGACTA+AGG + chr6_4:14529311-14529330 None:intergenic 50.0%
!! GGAAAGTGCTTTGACTTGGC+TGG + chr6_4:14529566-14529585 None:intergenic 50.0%
! AAACACTAGCCATGGCGGAA+TGG - chr6_4:14529783-14529802 Msa0978490:intron 50.0%
! TTGTGAAGCGCCACCTTCTA+TGG - chr6_4:14529840-14529859 Msa0978490:intron 50.0%
AACAATGGCACCGCCATAGA+AGG + chr6_4:14529856-14529875 None:intergenic 50.0%
TGATGTTAGGCGGCTATTGG+TGG - chr6_4:14530002-14530021 Msa0978490:intron 50.0%
GATGTTAGGCGGCTATTGGT+GGG - chr6_4:14530003-14530022 Msa0978490:intron 50.0%
! TATTGGTGGGTGGCACTGTT+TGG - chr6_4:14530016-14530035 Msa0978490:intron 50.0%
! ACAGAAAGCTTGGGAGCACA+AGG + chr6_4:14530800-14530819 None:intergenic 50.0%
TCCCAAGCTTTCTGTTCGAC+AGG - chr6_4:14530805-14530824 Msa0978490:intron 50.0%
GTGAAGGACACGTTTGGACA+TGG - chr6_4:14531393-14531412 Msa0978490:intron 50.0%
GAAGGACACGTTTGGACATG+GGG - chr6_4:14531395-14531414 Msa0978490:intron 50.0%
ACAGATTTCAGTCCCGGTTC+GGG - chr6_4:14531823-14531842 Msa0978490:intron 50.0%
TCCAAGAGGATGGAACTCTG+TGG - chr6_4:14531903-14531922 Msa0978490:intron 50.0%
CCAAGAGGATGGAACTCTGT+GGG - chr6_4:14531904-14531923 Msa0978490:intron 50.0%
AGGACTCTCTGGACTTACTG+TGG - chr6_4:14532000-14532019 Msa0978490:intron 50.0%
! GCCTTAGTGGGAAAAGGCAT+TGG + chr6_4:14532116-14532135 None:intergenic 50.0%
AACAGGGCCTTAGTGGGAAA+AGG + chr6_4:14532122-14532141 None:intergenic 50.0%
TTTCCCACTAAGGCCCTGTT+TGG - chr6_4:14532122-14532141 Msa0978490:intron 50.0%
TTACCACTGGCCAACCTCTT+CGG + chr6_4:14532919-14532938 None:intergenic 50.0%
! GGTTGGCCAGTGGTAACAAT+AGG - chr6_4:14532923-14532942 Msa0978490:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG - chr6_4:14533018-14533037 Msa0978490:intron 50.0%
AAATGTTAACGAGTGCCCCC+GGG - chr6_4:14533019-14533038 Msa0978490:intron 50.0%
!! AGTGCTTAAAAAGTGCCCCG+GGG + chr6_4:14533038-14533057 None:intergenic 50.0%
!! GATGCTTAAAGAGTGCCCCA+GGG - chr6_4:14533149-14533168 Msa0978490:intron 50.0%
!! ATGCTTAAAGAGTGCCCCAG+GGG - chr6_4:14533150-14533169 Msa0978490:intron 50.0%
TCTTGTTAACGAGTGCCCCT+GGG + chr6_4:14533168-14533187 None:intergenic 50.0%
! TGCATTGACCGATGAAGGAG+AGG - chr6_4:14534146-14534165 Msa0978490:intron 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr6_4:14534438-14534457 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr6_4:14534435-14534454 Msa0978490:CDS 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr6_4:14534441-14534460 Msa0978490:CDS 50.0%
TCATTGGAAAAACGCCACCG+TGG + chr6_4:14535131-14535150 None:intergenic 50.0%
TCATTGGAAAAACGCCACCG+TGG + chr6_4:14535131-14535150 None:intergenic 50.0%
TTCAGGTATATGGCTGGGGA+AGG - chr6_4:14535261-14535280 Msa0978490:intron 50.0%
TCAGGTATATGGCTGGGGAA+GGG - chr6_4:14535262-14535281 Msa0978490:intron 50.0%
CAGTTTGGGAGAGGTGATCA+TGG - chr6_4:14535915-14535934 Msa0978490:intron 50.0%
AGAGGTGATCATGGACGTCT+TGG - chr6_4:14535924-14535943 Msa0978490:intron 50.0%
ATGGACGTCTTGGATATGGG+AGG - chr6_4:14535934-14535953 Msa0978490:intron 50.0%
CACTACTGGTCAACCAATGG+AGG - chr6_4:14535962-14535981 Msa0978490:intron 50.0%
TGTGGAGGAGGGATGTCTAT+AGG + chr6_4:14535990-14536009 None:intergenic 50.0%
ACGGTGAAGCTGAGGGAAAT+TGG - chr6_4:14536027-14536046 Msa0978490:intron 50.0%
ATAGCCAAACTCGTCGCTTG+CGG - chr6_4:14536050-14536069 Msa0978490:intron 50.0%
TGCAGGGGTTCAGGTGAAGA+TGG - chr6_4:14528150-14528169 Msa0978490:three_prime_UTR 55.0%
GGCGCTTCACAAATCGCCTA+TGG + chr6_4:14529832-14529851 None:intergenic 55.0%
! TGAAGCGCCACCTTCTATGG+CGG - chr6_4:14529843-14529862 Msa0978490:intron 55.0%
AATGGCACCGCCATAGAAGG+TGG + chr6_4:14529853-14529872 None:intergenic 55.0%
TGGTGAAGAACCTGAGCGCA+AGG - chr6_4:14530730-14530749 Msa0978490:intron 55.0%
CCATTGTCATCCTTGCGCTC+AGG + chr6_4:14530743-14530762 None:intergenic 55.0%
CCTGAGCGCAAGGATGACAA+TGG - chr6_4:14530740-14530759 Msa0978490:intron 55.0%
CTTATGGTGCAGGTTGCTGC+TGG - chr6_4:14531344-14531363 Msa0978490:intron 55.0%
TGCTGGAGGAACTCACTCAG+TGG - chr6_4:14531361-14531380 Msa0978490:intron 55.0%
TACATGTCACCAGGAGGCCA+CGG + chr6_4:14531425-14531444 None:intergenic 55.0%
TCAAGACCTTGCACCCGAAC+CGG + chr6_4:14531839-14531858 None:intergenic 55.0%
CCCACAGAGTTCCATCCTCT+TGG + chr6_4:14531907-14531926 None:intergenic 55.0%
AGGATGGAACTCTGTGGGCT+TGG - chr6_4:14531909-14531928 Msa0978490:intron 55.0%
GGATGGAACTCTGTGGGCTT+GGG - chr6_4:14531910-14531929 Msa0978490:intron 55.0%
GATGGAACTCTGTGGGCTTG+GGG - chr6_4:14531911-14531930 Msa0978490:intron 55.0%
AATGTTAACGAGTGCCCCCG+GGG - chr6_4:14533020-14533039 Msa0978490:intron 55.0%
!! GTGCTTAAAAAGTGCCCCGG+GGG + chr6_4:14533037-14533056 None:intergenic 55.0%
!! GGATGCTTAAAGAGTGCCCC+AGG - chr6_4:14533148-14533167 Msa0978490:intron 55.0%
CTTGTTAACGAGTGCCCCTG+GGG + chr6_4:14533167-14533186 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+TGG + chr6_4:14533169-14533188 None:intergenic 55.0%
CATGCATAGGCAGTGCCACA+TGG - chr6_4:14533370-14533389 Msa0978490:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr6_4:14534443-14534462 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr6_4:14534449-14534468 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr6_4:14534450-14534469 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr6_4:14534449-14534468 Msa0978490:intron 55.0%
CAGGTATATGGCTGGGGAAG+GGG - chr6_4:14535263-14535282 Msa0978490:intron 55.0%
AGGGGAGAACATGGTAGGCT+TGG - chr6_4:14535281-14535300 Msa0978490:intron 55.0%
GTTTGTGGTCAGGTGTCCTG+TGG - chr6_4:14535705-14535724 Msa0978490:intron 55.0%
ATCCCTCCTCCACAGAACCT+CGG - chr6_4:14535996-14536015 Msa0978490:intron 55.0%
! CTAGCCATGGCGGAATGGTG+TGG - chr6_4:14529788-14529807 Msa0978490:intron 60.0%
TCCACCACACCATTCCGCCA+TGG + chr6_4:14529795-14529814 None:intergenic 60.0%
GTTAGGCGGCTATTGGTGGG+TGG - chr6_4:14530006-14530025 Msa0978490:intron 60.0%
! GCTTGGGAGCACAAGGCTGA+GGG + chr6_4:14530793-14530812 None:intergenic 60.0%
! AGCTTGGGAGCACAAGGCTG+AGG + chr6_4:14530794-14530813 None:intergenic 60.0%
ATGGTGCAGGTTGCTGCTGG+AGG - chr6_4:14531347-14531366 Msa0978490:intron 60.0%
TTTGGACATGGGGTCAGCCG+TGG - chr6_4:14531405-14531424 Msa0978490:intron 60.0%
CAAGACCTTGCACCCGAACC+GGG + chr6_4:14531838-14531857 None:intergenic 60.0%
! TTGCCGAAGAGGTTGGCCAG+TGG - chr6_4:14532913-14532932 Msa0978490:intron 60.0%
GGGGAAGGGGAGAACATGGT+AGG - chr6_4:14535276-14535295 Msa0978490:intron 60.0%
TGTGGTCAGGTGTCCTGTGG+AGG - chr6_4:14535708-14535727 Msa0978490:intron 60.0%
CACCGAGGTTCTGTGGAGGA+GGG + chr6_4:14536001-14536020 None:intergenic 60.0%
TCACCGAGGTTCTGTGGAGG+AGG + chr6_4:14536002-14536021 None:intergenic 60.0%
TCAGCGTCACCGAGGTTCTG+TGG + chr6_4:14536008-14536027 None:intergenic 60.0%
CAGAACCTCGGTGACGCTGA+CGG - chr6_4:14536008-14536027 Msa0978490:intron 60.0%
TGACGCTGACGGTGAAGCTG+AGG - chr6_4:14536019-14536038 Msa0978490:intron 60.0%
GACGCTGACGGTGAAGCTGA+GGG - chr6_4:14536020-14536039 Msa0978490:intron 60.0%
TTGCGGTGGCCGCCATACTT+TGG - chr6_4:14536067-14536086 Msa0978490:intron 60.0%
! GCCATGGCGGAATGGTGTGG+TGG - chr6_4:14529791-14529810 Msa0978490:intron 65.0%
!! TCAGTCCCGGTTCGGGTGCA+AGG - chr6_4:14531830-14531849 Msa0978490:intron 65.0%
GGCTGGGGAAGGGGAGAACA+TGG - chr6_4:14535272-14535291 Msa0978490:intron 65.0%
GCGTCACCGAGGTTCTGTGG+AGG + chr6_4:14536005-14536024 None:intergenic 65.0%
CTTCACCGTCAGCGTCACCG+AGG + chr6_4:14536016-14536035 None:intergenic 65.0%
GCCAAACTCGTCGCTTGCGG+TGG - chr6_4:14536053-14536072 Msa0978490:intron 65.0%
GCCACCGCAAGCGACGAGTT+TGG + chr6_4:14536057-14536076 None:intergenic 65.0%
TGGGGTCAGCCGTGGCCTCC+TGG - chr6_4:14531413-14531432 Msa0978490:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 14527959 14536516 14527959 ID=Msa0978490;Name=Msa0978490
chr6_4 mRNA 14527959 14536516 14527959 ID=Msa0978490-mRNA-1;Parent=Msa0978490;Name=Msa0978490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=94|1|1|1|1|1|11|374|398
chr6_4 exon 14527959 14528557 14527959 ID=Msa0978490-mRNA-1:exon:4779;Parent=Msa0978490-mRNA-1
chr6_4 exon 14528702 14528758 14528702 ID=Msa0978490-mRNA-1:exon:4778;Parent=Msa0978490-mRNA-1
chr6_4 exon 14529096 14529209 14529096 ID=Msa0978490-mRNA-1:exon:4777;Parent=Msa0978490-mRNA-1
chr6_4 exon 14530308 14530361 14530308 ID=Msa0978490-mRNA-1:exon:4776;Parent=Msa0978490-mRNA-1
chr6_4 exon 14532454 14532655 14532454 ID=Msa0978490-mRNA-1:exon:4775;Parent=Msa0978490-mRNA-1
chr6_4 exon 14533034 14533119 14533034 ID=Msa0978490-mRNA-1:exon:4774;Parent=Msa0978490-mRNA-1
chr6_4 exon 14533649 14533767 14533649 ID=Msa0978490-mRNA-1:exon:4773;Parent=Msa0978490-mRNA-1
chr6_4 exon 14534404 14534464 14534404 ID=Msa0978490-mRNA-1:exon:4772;Parent=Msa0978490-mRNA-1
chr6_4 exon 14534872 14534982 14534872 ID=Msa0978490-mRNA-1:exon:4771;Parent=Msa0978490-mRNA-1
chr6_4 exon 14536176 14536320 14536176 ID=Msa0978490-mRNA-1:exon:4770;Parent=Msa0978490-mRNA-1
chr6_4 exon 14536400 14536516 14536400 ID=Msa0978490-mRNA-1:exon:4769;Parent=Msa0978490-mRNA-1
chr6_4 five_prime_UTR 14536423 14536516 14536423 ID=Msa0978490-mRNA-1:five_prime_utr;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14536400 14536422 14536400 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14536176 14536320 14536176 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14534872 14534982 14534872 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14534404 14534464 14534404 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14533649 14533767 14533649 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14533034 14533119 14533034 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14532454 14532655 14532454 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14530308 14530361 14530308 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14529096 14529209 14529096 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14528702 14528758 14528702 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 CDS 14528333 14528557 14528333 ID=Msa0978490-mRNA-1:cds;Parent=Msa0978490-mRNA-1
chr6_4 three_prime_UTR 14527959 14528332 14527959 ID=Msa0978490-mRNA-1:three_prime_utr;Parent=Msa0978490-mRNA-1
Gene Sequence

>Msa0978490

ATGGCTTCCAACATCATTGCTTGGGGTTCAGGTGAAGATGGTCAATTAGGAATTGGTACAAACGAAGATAAGGAATGGGTTTGTTCTGTTAAAGCTCTTCCTTCTCAACGTGTTCGTTCTGTTGTTGCTGGTAGTAGAAATTCACTCGCCATTTCTCATGATGGCAAGTTGTTTACATGGGGTTGGAATCAAAGGGGAACACTTGGACACCCAGCTGAAACGAAGACTGAAAACATTCCCAGCCAAGTCAAAGCACTTTCCCATGTTCACATTGTTCAGGCGGCTATTGGTGGGTGGCACTGTTTGGCTGTTGATGATCACGGAAAAGCTTATGCTTGGGGTGGAAATGAATATGGTCAGTGTGGTGAAGAACCTGAGCGCAAGGATGACAATGGTAGACCTTTGAGGAGAGATATAGTGATCCCTCAGCCTTGTGCTCCCAAGCTTTCTGTTCGACAGGTTGCTGCTGGAGGAACTCACTCAGTGGTACTTACACGTGAAGGACACGTTTGGACATGGGGTCAGCCGTGGCCTCCTGGTGACATTAAACAGATTTCAGTCCCGGTTCGGGTGCAAGGTCTTGAGAATATAAAGCTTATAGCAGTAGGTGCATTTCATAATTTGGCTCTCCAAGAGGATGGAACTCTGTGGGCTTGGGGTAATAATGAATATGGACAACTTGGAACTGGAGATACGCAACCAAGATCACAACCTATTCATGTGCAAGGACTCTCTGGACTTACTGTGGTAGATATTGCAGCTGGTGGATGGCACTCTACTGCATTGACCGATGAAGGAGAGGTATATGGCTGGGGAAGGGGAGAACATGGTAGGCTTGGATTTGGTGATAGTGATAAAAGCAGTAAAATGTTACCTCAGAGGGTTCAACTTTTAGCCGGTGAAGATATTGTTCAGGTGTCCTGTGGAGGTACTCATTCTGTTGCATTAACTCGAGATGGGCGCATATTTTCTTTTGGGAGAGGTGATCATGGACGTCTTGGATATGGGAGGAAAGTCACTACTGGTCAACCAATGGAGGTACCTATAGACATCCCTCCTCCACAGAACCTCGGTGACGCTGACGGTGAAGCTGAGGGAAATTGGATAGCCAAACTCGTCGCTTGCGGTGGCCGCCATACTTTGGCAATAGTAGAATGGAAAGATGATGAATCTAAAGATGAATCTATTCACGATTAA
Protein sequence

>Msa0978490

MASNIIAWGSGEDGQLGIGTNEDKEWVCSVKALPSQRVRSVVAGSRNSLAISHDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALSHVHIVQAAIGGWHCLAVDDHGKAYAWGGNEYGQCGEEPERKDDNGRPLRRDIVIPQPCAPKLSVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENIKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIHVQGLSGLTVVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMLPQRVQLLAGEDIVQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPQNLGDADGEAEGNWIAKLVACGGRHTLAIVEWKDDESKDESIHD*