Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049370 | XP_013448778.1 | 99.515 | 206 | 1 | 0 | 1 | 206 | 1 | 206 | 4.90e-148 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049370 | sp|Q9FKC0|R13A4_ARATH | 85.922 | 206 | 29 | 0 | 1 | 206 | 1 | 206 | 1.38e-132 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049370 | B7FGF9 | 99.515 | 206 | 1 | 0 | 1 | 206 | 1 | 206 | 2.34e-148 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0049370 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa0002750 | Msa0049370 | 0.832946 | 7.072559e-56 | -8.615850e-47 |
| Msa0002790 | Msa0049370 | 0.817631 | 2.983913e-52 | -8.615850e-47 |
| Msa0003720 | Msa0049370 | 0.816909 | 4.337445e-52 | -8.615850e-47 |
| Msa0003780 | Msa0049370 | 0.857986 | 1.122753e-62 | -8.615850e-47 |
| Msa0006380 | Msa0049370 | 0.824688 | 7.046897e-54 | -8.615850e-47 |
| Msa0027260 | Msa0049370 | 0.889247 | 2.873053e-73 | -8.615850e-47 |
| Msa0032090 | Msa0049370 | 0.815169 | 1.060971e-51 | -8.615850e-47 |
| Msa0032260 | Msa0049370 | 0.803036 | 4.221493e-49 | -8.615850e-47 |
| Msa0032430 | Msa0049370 | 0.809937 | 1.477899e-50 | -8.615850e-47 |
| Msa0032920 | Msa0049370 | -0.806592 | 7.631513e-50 | -8.615850e-47 |
| Msa0033110 | Msa0049370 | 0.813229 | 2.845215e-51 | -8.615850e-47 |
| Msa0033260 | Msa0049370 | 0.811983 | 5.327755e-51 | -8.615850e-47 |
| Msa0040690 | Msa0049370 | 0.861277 | 1.148606e-63 | -8.615850e-47 |
| Msa0042280 | Msa0049370 | 0.869845 | 2.281017e-66 | -8.615850e-47 |
| Msa0047160 | Msa0049370 | 0.815465 | 9.117769e-52 | -8.615850e-47 |
| Msa0048180 | Msa0049370 | 0.837434 | 5.209102e-57 | -8.615850e-47 |
| Msa0049370 | Msa0056470 | 0.844725 | 6.326642e-59 | -8.615850e-47 |
| Msa0049370 | Msa0059040 | 0.837596 | 4.736285e-57 | -8.615850e-47 |
| Msa0049370 | Msa0059110 | 0.833880 | 4.135498e-56 | -8.615850e-47 |
| Msa0049370 | Msa0072420 | 0.835533 | 1.588117e-56 | -8.615850e-47 |
| Msa0049370 | Msa0075170 | 0.827676 | 1.371701e-54 | -8.615850e-47 |
| Msa0049370 | Msa0079380 | 0.806359 | 8.548008e-50 | -8.615850e-47 |
| Msa0049370 | Msa0081520 | 0.800736 | 1.252783e-48 | -8.615850e-47 |
| Msa0049370 | Msa0086750 | 0.831922 | 1.268453e-55 | -8.615850e-47 |
| Msa0049370 | Msa0090520 | 0.820601 | 6.291287e-53 | -8.615850e-47 |
| Msa0049370 | Msa0091410 | 0.811719 | 6.083164e-51 | -8.615850e-47 |
| Msa0049370 | Msa0094470 | 0.835040 | 2.114636e-56 | -8.615850e-47 |
| Msa0049370 | Msa0100740 | 0.835524 | 1.596292e-56 | -8.615850e-47 |
| Msa0049370 | Msa0105370 | 0.826297 | 2.931533e-54 | -8.615850e-47 |
| Msa0049370 | Msa0118710 | 0.820711 | 5.936278e-53 | -8.615850e-47 |
| Msa0049370 | Msa0127050 | 0.807263 | 5.504942e-50 | -8.615850e-47 |
| Msa0049370 | Msa0128860 | 0.864080 | 1.572889e-64 | -8.615850e-47 |
| Msa0049370 | Msa0137990 | 0.825282 | 5.104442e-54 | -8.615850e-47 |
| Msa0049370 | Msa0140820 | 0.856983 | 2.223456e-62 | -8.615850e-47 |
| Msa0049370 | Msa0146340 | 0.822221 | 2.659650e-53 | -8.615850e-47 |
| Msa0049370 | Msa0159170 | 0.804334 | 2.270779e-49 | -8.615850e-47 |
| Msa0049370 | Msa0165660 | 0.800840 | 1.193345e-48 | -8.615850e-47 |
| Msa0049370 | Msa0167480 | 0.825866 | 3.710319e-54 | -8.615850e-47 |
| Msa0049370 | Msa0169310 | 0.802122 | 6.516726e-49 | -8.615850e-47 |
| Msa0049370 | Msa0172070 | 0.813218 | 2.861444e-51 | -8.615850e-47 |
| Msa0049370 | Msa0174730 | 0.864256 | 1.386162e-64 | -8.615850e-47 |
| Msa0049370 | Msa0183900 | 0.826177 | 3.129917e-54 | -8.615850e-47 |
| Msa0049370 | Msa0187930 | 0.819456 | 1.150667e-52 | -8.615850e-47 |
| Msa0049370 | Msa0188350 | 0.829195 | 5.895718e-55 | -8.615850e-47 |
| Msa0049370 | Msa0189300 | 0.804283 | 2.326741e-49 | -8.615850e-47 |
| Msa0049370 | Msa0189700 | 0.844602 | 6.829960e-59 | -8.615850e-47 |
| Msa0049370 | Msa0194540 | 0.813719 | 2.220174e-51 | -8.615850e-47 |
| Msa0049370 | Msa0199880 | 0.816880 | 4.402236e-52 | -8.615850e-47 |
| Msa0049370 | Msa0204960 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0049370 | Msa0220720 | 0.806229 | 9.104963e-50 | -8.615850e-47 |
| Msa0049370 | Msa0229230 | 0.809065 | 2.274633e-50 | -8.615850e-47 |
| Msa0049370 | Msa0231100 | 0.827258 | 1.727912e-54 | -8.615850e-47 |
| Msa0049370 | Msa0231980 | 0.846199 | 2.523344e-59 | -8.615850e-47 |
| Msa0049370 | Msa0232010 | 0.851220 | 1.022513e-60 | -8.615850e-47 |
| Msa0049370 | Msa0232050 | 0.840910 | 6.540664e-58 | -8.615850e-47 |
| Msa0049370 | Msa0232080 | 0.854879 | 9.171705e-62 | -8.615850e-47 |
| Msa0049370 | Msa0244780 | 0.819827 | 9.466754e-53 | -8.615850e-47 |
| Msa0049370 | Msa0249580 | 0.818544 | 1.854637e-52 | -8.615850e-47 |
| Msa0049370 | Msa0250820 | 0.807647 | 4.563432e-50 | -8.615850e-47 |
| Msa0049370 | Msa0258390 | 0.807326 | 5.339335e-50 | -8.615850e-47 |
| Msa0049370 | Msa0265430 | 0.801194 | 1.009992e-48 | -8.615850e-47 |
| Msa0049370 | Msa0268130 | 0.821368 | 4.189774e-53 | -8.615850e-47 |
| Msa0049370 | Msa0272490 | 0.802482 | 5.494373e-49 | -8.615850e-47 |
| Msa0049370 | Msa0280610 | 0.836040 | 1.180936e-56 | -8.615850e-47 |
| Msa0049370 | Msa0288080 | 0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0049370 | Msa0289580 | 0.826425 | 2.731558e-54 | -8.615850e-47 |
| Msa0049370 | Msa0289610 | 0.827515 | 1.499425e-54 | -8.615850e-47 |
| Msa0049370 | Msa0292400 | 0.804216 | 2.403016e-49 | -8.615850e-47 |
| Msa0049370 | Msa0298990 | 0.822233 | 2.643739e-53 | -8.615850e-47 |
| Msa0049370 | Msa0299870 | 0.810247 | 1.267512e-50 | -8.615850e-47 |
| Msa0049370 | Msa0304590 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
| Msa0049370 | Msa0307850 | 0.813488 | 2.495248e-51 | -8.615850e-47 |
| Msa0049370 | Msa0312700 | 0.802037 | 6.783337e-49 | -8.615850e-47 |
| Msa0049370 | Msa0326480 | 0.835209 | 1.917182e-56 | -8.615850e-47 |
| Msa0049370 | Msa0327300 | 0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0049370 | Msa0327330 | 0.841350 | 5.012140e-58 | -8.615850e-47 |
| Msa0049370 | Msa0336010 | 0.838350 | 3.030029e-57 | -8.615850e-47 |
| Msa0049370 | Msa0337240 | 0.809858 | 1.536818e-50 | -8.615850e-47 |
| Msa0049370 | Msa0340380 | 0.826366 | 2.822279e-54 | -8.615850e-47 |
| Msa0049370 | Msa0357900 | 0.853647 | 2.080616e-61 | -8.615850e-47 |
| Msa0049370 | Msa0366890 | 0.845565 | 3.750863e-59 | -8.615850e-47 |
| Msa0049370 | Msa0369450 | 0.879591 | 1.099593e-69 | -8.615850e-47 |
| Msa0049370 | Msa0374930 | 0.830744 | 2.471351e-55 | -8.615850e-47 |
| Msa0049370 | Msa0376310 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa0049370 | Msa0385580 | 0.816827 | 4.525356e-52 | -8.615850e-47 |
| Msa0049370 | Msa0393370 | 0.805748 | 1.149380e-49 | -8.615850e-47 |
| Msa0049370 | Msa0395820 | 0.879656 | 1.042945e-69 | -8.615850e-47 |
| Msa0049370 | Msa0402790 | 0.806432 | 8.251661e-50 | -8.615850e-47 |
| Msa0049370 | Msa0414800 | 0.820500 | 6.639104e-53 | -8.615850e-47 |
| Msa0049370 | Msa0418270 | 0.842135 | 3.110721e-58 | -8.615850e-47 |
| Msa0049370 | Msa0427150 | 0.817001 | 4.135282e-52 | -8.615850e-47 |
| Msa0049370 | Msa0443390 | 0.822308 | 2.538970e-53 | -8.615850e-47 |
| Msa0049370 | Msa0468330 | 0.810818 | 9.539234e-51 | -8.615850e-47 |
| Msa0049370 | Msa0471440 | 0.803777 | 2.964450e-49 | -8.615850e-47 |
| Msa0049370 | Msa0497210 | 0.808931 | 2.429546e-50 | -8.615850e-47 |
| Msa0049370 | Msa0510940 | 0.818032 | 2.421779e-52 | -8.615850e-47 |
| Msa0049370 | Msa0521050 | 0.865043 | 7.859337e-65 | -8.615850e-47 |
| Msa0049370 | Msa0524500 | 0.820150 | 7.986980e-53 | -8.615850e-47 |
| Msa0049370 | Msa0526540 | 0.844429 | 7.600544e-59 | -8.615850e-47 |
| Msa0049370 | Msa0527020 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0049370 | Msa0531650 | 0.843696 | 1.195211e-58 | -8.615850e-47 |
| Msa0049370 | Msa0532990 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0049370 | Msa0555450 | 0.813416 | 2.587586e-51 | -8.615850e-47 |
| Msa0049370 | Msa0556060 | 0.823818 | 1.128379e-53 | -8.615850e-47 |
| Msa0049370 | Msa0570760 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
| Msa0049370 | Msa0572840 | 0.815560 | 8.684905e-52 | -8.615850e-47 |
| Msa0049370 | Msa0576940 | 0.837569 | 4.810839e-57 | -8.615850e-47 |
| Msa0049370 | Msa0581110 | 0.838530 | 2.722622e-57 | -8.615850e-47 |
| Msa0049370 | Msa0581280 | 0.808771 | 2.629104e-50 | -8.615850e-47 |
| Msa0049370 | Msa0588360 | 0.882539 | 9.568824e-71 | -8.615850e-47 |
| Msa0049370 | Msa0608320 | 0.832302 | 1.021492e-55 | -8.615850e-47 |
| Msa0049370 | Msa0615440 | 0.845501 | 3.904263e-59 | -8.615850e-47 |
| Msa0049370 | Msa0615580 | 0.816964 | 4.214131e-52 | -8.615850e-47 |
| Msa0049370 | Msa0615710 | 0.835526 | 1.593952e-56 | -8.615850e-47 |
| Msa0049370 | Msa0621950 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0049370 | Msa0649020 | 0.808056 | 3.735076e-50 | -8.615850e-47 |
| Msa0049370 | Msa0649050 | 0.803071 | 4.152227e-49 | -8.615850e-47 |
| Msa0049370 | Msa0657580 | 0.802876 | 4.557189e-49 | -8.615850e-47 |
| Msa0049370 | Msa0661300 | 0.847756 | 9.455617e-60 | -8.615850e-47 |
| Msa0049370 | Msa0669520 | 0.866874 | 2.071648e-65 | -8.615850e-47 |
| Msa0049370 | Msa0688850 | 0.801893 | 7.261440e-49 | -8.615850e-47 |
| Msa0049370 | Msa0689260 | 0.801360 | 9.339840e-49 | -8.615850e-47 |
| Msa0049370 | Msa0691900 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0049370 | Msa0698490 | 0.845217 | 4.662127e-59 | -8.615850e-47 |
| Msa0049370 | Msa0698660 | 0.842423 | 2.609551e-58 | -8.615850e-47 |
| Msa0049370 | Msa0698780 | 0.848363 | 6.430481e-60 | -8.615850e-47 |
| Msa0049370 | Msa0707250 | 0.800136 | 1.660509e-48 | -8.615850e-47 |
| Msa0049370 | Msa0722020 | 0.827956 | 1.174744e-54 | -8.615850e-47 |
| Msa0049370 | Msa0738100 | 0.826510 | 2.607949e-54 | -8.615850e-47 |
| Msa0049370 | Msa0763020 | 0.814088 | 1.840787e-51 | -8.615850e-47 |
| Msa0049370 | Msa0763070 | 0.808614 | 2.839793e-50 | -8.615850e-47 |
| Msa0049370 | Msa0788850 | 0.805453 | 1.325352e-49 | -8.615850e-47 |
| Msa0049370 | Msa0792760 | 0.995154 | 1.617520e-213 | -8.615850e-47 |
| Msa0049370 | Msa0808270 | 0.801685 | 8.011566e-49 | -8.615850e-47 |
| Msa0049370 | Msa0817540 | 0.826490 | 2.636955e-54 | -8.615850e-47 |
| Msa0049370 | Msa0858770 | 0.800435 | 1.443054e-48 | -8.615850e-47 |
| Msa0049370 | Msa0881290 | 0.844976 | 5.414725e-59 | -8.615850e-47 |
| Msa0049370 | Msa0891710 | 0.809623 | 1.727004e-50 | -8.615850e-47 |
| Msa0049370 | Msa0902760 | 0.874002 | 9.491394e-68 | -8.615850e-47 |
| Msa0049370 | Msa0953310 | 0.845525 | 3.846402e-59 | -8.615850e-47 |
| Msa0049370 | Msa0968590 | 0.815010 | 1.150934e-51 | -8.615850e-47 |
| Msa0049370 | Msa0970030 | 0.807890 | 4.052592e-50 | -8.615850e-47 |
| Msa0049370 | Msa0978490 | 0.801469 | 8.872039e-49 | -8.615850e-47 |
| Msa0049370 | Msa1006840 | 0.872145 | 3.981977e-67 | -8.615850e-47 |
| Msa0049370 | Msa1012740 | 0.802899 | 4.507154e-49 | -8.615850e-47 |
| Msa0049370 | Msa1013400 | 0.869405 | 3.174710e-66 | -8.615850e-47 |
| Msa0049370 | Msa1019240 | 0.834373 | 3.112703e-56 | -8.615850e-47 |
| Msa0049370 | Msa1019260 | 0.849379 | 3.358301e-60 | -8.615850e-47 |
| Msa0049370 | Msa1040400 | 0.806804 | 6.885917e-50 | -8.615850e-47 |
| Msa0049370 | Msa1043690 | 0.810865 | 9.320268e-51 | -8.615850e-47 |
| Msa0049370 | Msa1051880 | 0.859703 | 3.443217e-63 | -8.615850e-47 |
| Msa0049370 | Msa1078170 | 0.813873 | 2.053081e-51 | -8.615850e-47 |
| Msa0049370 | Msa1081150 | 0.828185 | 1.034811e-54 | -8.615850e-47 |
| Msa0049370 | Msa1081930 | 0.867947 | 9.395814e-66 | -8.615850e-47 |
| Msa0049370 | Msa1093530 | 0.872872 | 2.277375e-67 | -8.615850e-47 |
| Msa0049370 | Msa1104140 | 0.878168 | 3.493801e-69 | -8.615850e-47 |
| Msa0049370 | Msa1104210 | 0.845169 | 4.803119e-59 | -8.615850e-47 |
| Msa0049370 | Msa1106700 | 0.816530 | 5.274172e-52 | -8.615850e-47 |
| Msa0049370 | Msa1124110 | 0.808248 | 3.400224e-50 | -8.615850e-47 |
| Msa0049370 | Msa1126510 | 0.853799 | 1.882218e-61 | -8.615850e-47 |
| Msa0049370 | Msa1126830 | 0.835755 | 1.394618e-56 | -8.615850e-47 |
| Msa0049370 | Msa1135890 | 0.810612 | 1.057259e-50 | -8.615850e-47 |
| Msa0049370 | Msa1147900 | 0.826296 | 2.932689e-54 | -8.615850e-47 |
| Msa0049370 | Msa1147970 | 0.818634 | 1.769376e-52 | -8.615850e-47 |
| Msa0049370 | Msa1148910 | 0.814362 | 1.601113e-51 | -8.615850e-47 |
| Msa0049370 | Msa1165780 | 0.812394 | 4.334802e-51 | -8.615850e-47 |
| Msa0049370 | Msa1165940 | 0.853957 | 1.694412e-61 | -8.615850e-47 |
| Msa0049370 | Msa1166860 | 0.850579 | 1.549590e-60 | -8.615850e-47 |
| Msa0049370 | Msa1166870 | 0.812172 | 4.846271e-51 | -8.615850e-47 |
| Msa0049370 | Msa1181830 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
| Msa0049370 | Msa1181850 | 0.840978 | 6.275922e-58 | -8.615850e-47 |
| Msa0049370 | Msa1181860 | 0.829362 | 5.369658e-55 | -8.615850e-47 |
| Msa0049370 | Msa1207270 | 0.885836 | 5.765182e-72 | -8.615850e-47 |
| Msa0049370 | Msa1209200 | 0.815574 | 8.621176e-52 | -8.615850e-47 |
| Msa0049370 | Msa1215820 | 0.823786 | 1.148331e-53 | -8.615850e-47 |
| Msa0049370 | Msa1218600 | 0.858212 | 9.621805e-63 | -8.615850e-47 |
| Msa0049370 | Msa1225700 | 0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0049370 | Msa1229320 | 0.806894 | 6.590865e-50 | -8.615850e-47 |
| Msa0049370 | Msa1251160 | 0.819072 | 1.407390e-52 | -8.615850e-47 |
| Msa0049370 | Msa1254730 | 0.861990 | 6.957527e-64 | -8.615850e-47 |
| Msa0049370 | Msa1257510 | 0.819093 | 1.392011e-52 | -8.615850e-47 |
| Msa0049370 | Msa1265630 | 0.820191 | 7.812647e-53 | -8.615850e-47 |
| Msa0049370 | Msa1294820 | 0.840726 | 7.307921e-58 | -8.615850e-47 |
| Msa0049370 | Msa1305050 | 0.816706 | 4.815508e-52 | -8.615850e-47 |
| Msa0049370 | Msa1332590 | 0.812248 | 4.664993e-51 | -8.615850e-47 |
| Msa0049370 | Msa1343260 | 0.826206 | 3.080272e-54 | -8.615850e-47 |
| Msa0049370 | Msa1351540 | 0.802444 | 5.593201e-49 | -8.615850e-47 |
| Msa0049370 | Msa1352760 | 0.809420 | 1.909417e-50 | -8.615850e-47 |
| Msa0049370 | Msa1356440 | 0.807176 | 5.743614e-50 | -8.615850e-47 |
| Msa0049370 | Msa1358250 | 0.800970 | 1.122549e-48 | -8.615850e-47 |
| Msa0049370 | Msa1363330 | 0.848903 | 4.555388e-60 | -8.615850e-47 |
| Msa0049370 | Msa1374120 | 0.841356 | 4.993049e-58 | -8.615850e-47 |
| Msa0049370 | Msa1376650 | 0.816500 | 5.357023e-52 | -8.615850e-47 |
| Msa0049370 | Msa1379760 | 0.857686 | 1.377925e-62 | -8.615850e-47 |
| Msa0049370 | Msa1382560 | 0.825209 | 5.311567e-54 | -8.615850e-47 |
| Msa0049370 | Msa1382620 | 0.815333 | 9.753342e-52 | -8.615850e-47 |
| Msa0049370 | Msa1386600 | 0.849748 | 2.649552e-60 | -8.615850e-47 |
| Msa0049370 | Msa1394290 | 0.843124 | 1.699589e-58 | -8.615850e-47 |
| Msa0049370 | Msa1394500 | 0.816470 | 5.439818e-52 | -8.615850e-47 |
| Msa0049370 | Msa1399530 | 0.810420 | 1.162872e-50 | -8.615850e-47 |
| Msa0049370 | Msa1432700 | 0.845282 | 4.476674e-59 | -8.615850e-47 |
| Msa0049370 | Msa1433310 | 0.826590 | 2.495044e-54 | -8.615850e-47 |
| Msa0049370 | Msa1434420 | -0.800947 | 1.134924e-48 | -8.615850e-47 |
| Msa0049370 | Msa1443300 | 0.807457 | 5.008545e-50 | -8.615850e-47 |
| Msa0049370 | Msa1446810 | 0.811318 | 7.432747e-51 | -8.615850e-47 |
| Msa0049370 | Msa1448690 | 0.821683 | 3.543331e-53 | -8.615850e-47 |
| Msa0049370 | Msa1450280 | 0.840016 | 1.120868e-57 | -8.615850e-47 |
| Msa0049370 | Msa1451160 | 0.819722 | 1.000626e-52 | -8.615850e-47 |
| Msa0049370 | Msa1456050 | 0.830546 | 2.762826e-55 | -8.615850e-47 |
| Msa0049370 | Msa1457920 | 0.834635 | 2.674909e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049370 | MtrunA17_Chr7g0237121 | 99.515 | 206 | 1 | 0 | 1 | 206 | 1 | 206 | 4.50e-152 | 419 |
| Msa0049370 | MtrunA17_Chr1g0155981 | 94.660 | 206 | 11 | 0 | 1 | 206 | 1 | 206 | 9.61e-144 | 399 |
| Msa0049370 | MtrunA17_Chr5g0437981 | 90.291 | 206 | 20 | 0 | 1 | 206 | 1 | 206 | 6.52e-138 | 384 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049370 | AT5G48760.1 | 85.922 | 206 | 29 | 0 | 1 | 206 | 1 | 206 | 1.40e-133 | 373 |
| Msa0049370 | AT5G48760.2 | 85.922 | 206 | 29 | 0 | 1 | 206 | 1 | 206 | 1.40e-133 | 373 |
| Msa0049370 | AT4G13170.1 | 83.981 | 206 | 33 | 0 | 1 | 206 | 1 | 206 | 2.96e-131 | 367 |
| Msa0049370 | AT3G07110.1 | 83.981 | 206 | 33 | 0 | 1 | 206 | 1 | 206 | 3.23e-131 | 367 |
| Msa0049370 | AT3G24830.1 | 82.524 | 206 | 36 | 0 | 1 | 206 | 1 | 206 | 7.85e-130 | 363 |
| Msa0049370 | AT3G07110.2 | 83.575 | 207 | 33 | 1 | 1 | 206 | 1 | 207 | 2.41e-129 | 362 |
Find 82 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGAATTCCATTTCAGTTT+TGG | 0.252019 | 1_2:+2673220 | Msa0049370:three_prime_UTR |
| TTGATAGTGTGTTGGCTCTT+TGG | 0.265631 | 1_2:+2673335 | Msa0049370:three_prime_UTR |
| GGGCTCCCAGTAAGATCTTT+TGG | 0.302766 | 1_2:+2671843 | Msa0049370:CDS |
| AAATTTCAATTTGAACAGTT+TGG | 0.303868 | 1_2:+2673630 | Msa0049370:three_prime_UTR |
| TTGGTGTAACGTCGTATATT+TGG | 0.304119 | 1_2:+2673354 | Msa0049370:three_prime_UTR |
| GCAATCGAAGCAATATTATA+AGG | 0.315515 | 1_2:+2673538 | Msa0049370:three_prime_UTR |
| GTGCTTCTGGTGGTCTTGTT+AGG | 0.322378 | 1_2:+2671747 | Msa0049370:CDS |
| TTCTTCTTTGTGGCTCGGTT+AGG | 0.330627 | 1_2:-2671567 | None:intergenic |
| TGAAGTATATGAGATTTCTT+AGG | 0.358557 | 1_2:+2671777 | Msa0049370:CDS |
| TAACATAAAGATTCATAGTA+TGG | 0.365042 | 1_2:-2673394 | None:intergenic |
| ACCAAAATAACGCACCTTGA+TGG | 0.377840 | 1_2:-2672930 | None:intergenic |
| GGTCGTTATTTAATGTTTGT+TGG | 0.383334 | 1_2:+2673241 | Msa0049370:three_prime_UTR |
| TGTGAAGAGATTTGTGCTTC+TGG | 0.391599 | 1_2:+2671734 | Msa0049370:CDS |
| CGTATATTTGGATTTGTTTG+TGG | 0.392676 | 1_2:+2673366 | Msa0049370:three_prime_UTR |
| AATAACGACCAAAACTGAAA+TGG | 0.397312 | 1_2:-2673228 | None:intergenic |
| GATGCAAGGCACCACATGTT+AGG | 0.408002 | 1_2:+2671650 | Msa0049370:CDS |
| CTGGGAGCCCTAAAATGAAT+AGG | 0.417019 | 1_2:-2671830 | None:intergenic |
| TAGGGTGTTGAGGCTTCAAA+AGG | 0.427735 | 1_2:+2672847 | Msa0049370:intron |
| AAATACTACTCAGTACTTAA+CGG | 0.437826 | 1_2:-2673160 | None:intergenic |
| GTGGAGAGGCTGCACTTGCC+AGG | 0.446939 | 1_2:+2672667 | Msa0049370:CDS |
| CTCCATATGACAAAATTAAG+AGG | 0.448931 | 1_2:+2672715 | Msa0049370:CDS |
| TCTTCTTCTTCTTTGTGGCT+CGG | 0.449517 | 1_2:-2671572 | None:intergenic |
| CAAGATTCTCAGAATTCTGA+TGG | 0.450455 | 1_2:+2673664 | Msa0049370:three_prime_UTR |
| TACTCTAGAAATGACAATCT+TGG | 0.450998 | 1_2:+2673264 | Msa0049370:three_prime_UTR |
| AATACTACTCAGTACTTAAC+GGG | 0.453354 | 1_2:-2673159 | None:intergenic |
| CTTTATGTTAGTTGTTCGAT+TGG | 0.455131 | 1_2:+2673407 | Msa0049370:three_prime_UTR |
| CGGGAGCAAGAATTTCAAGT+TGG | 0.456903 | 1_2:-2673140 | None:intergenic |
| GGGAGCAAGAATTTCAAGTT+GGG | 0.464166 | 1_2:-2673139 | None:intergenic |
| AGTACGCCAAAAGATCTTAC+TGG | 0.471106 | 1_2:-2671849 | None:intergenic |
| ATATGAGATTTCTTAGGAAG+AGG | 0.471394 | 1_2:+2671783 | Msa0049370:CDS |
| TGTGTATTTAAGATGCATAT+AGG | 0.477220 | 1_2:+2673454 | Msa0049370:three_prime_UTR |
| AGAAGCAGATCAATAAATTG+AGG | 0.485847 | 1_2:+2673079 | Msa0049370:CDS |
| AATACTTACTTAAGAGCATC+GGG | 0.494332 | 1_2:-2672747 | None:intergenic |
| AATTGTCAGCAGAGGTTGGA+TGG | 0.505889 | 1_2:+2672894 | Msa0049370:CDS |
| GGTCACAAATACTGCACCCT+TGG | 0.507486 | 1_2:+2672869 | Msa0049370:CDS |
| ATAATTTGACTATAAGCTGT+AGG | 0.508933 | 1_2:+2673581 | Msa0049370:three_prime_UTR |
| TCTCCACGCTTTGTCTTGTG+TGG | 0.520427 | 1_2:-2672651 | None:intergenic |
| GTTGCAAAGGAGCTTCTCAA+TGG | 0.520484 | 1_2:+2671689 | Msa0049370:CDS |
| TGGAGACAAAGAGGAAGGAA+AGG | 0.523797 | 1_2:+2673034 | Msa0049370:CDS |
| GAAGCAGATCAATAAATTGA+GGG | 0.524740 | 1_2:+2673080 | Msa0049370:CDS |
| GGCTGCACTTGCCAGGATGA+AGG | 0.525665 | 1_2:+2672674 | Msa0049370:CDS |
| TTGTGTCCGTCTTAATACTC+TGG | 0.540044 | 1_2:+2673488 | Msa0049370:three_prime_UTR |
| GGACAATTGTCAGCAGAGGT+TGG | 0.549916 | 1_2:+2672890 | Msa0049370:CDS |
| TAATTTGACTATAAGCTGTA+GGG | 0.551883 | 1_2:+2673582 | Msa0049370:three_prime_UTR |
| ACCTTCATACACCTTCATCC+TGG | 0.554960 | 1_2:-2672685 | None:intergenic |
| CAATACTTACTTAAGAGCAT+CGG | 0.555382 | 1_2:-2672748 | None:intergenic |
| GCCAGGATGAAGGTGTATGA+AGG | 0.560258 | 1_2:+2672684 | Msa0049370:CDS |
| GAACTACGCCGGCACCATCA+AGG | 0.577844 | 1_2:+2672916 | Msa0049370:CDS |
| CCTCTGCTGACAATTGTCCA+AGG | 0.579787 | 1_2:-2672886 | None:intergenic |
| AACAGGAGCTGGAGACAAAG+AGG | 0.580730 | 1_2:+2673025 | Msa0049370:intron |
| ACTTGCCTCCATCGTTGCAA+AGG | 0.580774 | 1_2:+2671676 | Msa0049370:CDS |
| TATCAGCTTATGACGAAACT+CGG | 0.581151 | 1_2:-2673561 | None:intergenic |
| GAGAAGCTCCTTTGCAACGA+TGG | 0.584142 | 1_2:-2671684 | None:intergenic |
| ATATGACAAAATTAAGAGGA+TGG | 0.585968 | 1_2:+2672719 | Msa0049370:CDS |
| GAAGAGATTTGTGCTTCTGG+TGG | 0.586152 | 1_2:+2671737 | Msa0049370:CDS |
| CTCTGCTGACAATTGTCCAA+GGG | 0.586494 | 1_2:-2672885 | None:intergenic |
| ATAACGCACCTTGATGGTGC+CGG | 0.587747 | 1_2:-2672924 | None:intergenic |
| GGAGACAAAGAGGAAGGAAA+GGG | 0.597942 | 1_2:+2673035 | Msa0049370:CDS |
| TGGATGAAATTAGGGTGTTG+AGG | 0.598085 | 1_2:+2672837 | Msa0049370:intron |
| GTACGCCAAAAGATCTTACT+GGG | 0.598293 | 1_2:-2671848 | None:intergenic |
| GGAGCTTCTCAATGGACAGA+AGG | 0.600116 | 1_2:+2671697 | Msa0049370:CDS |
| ATGAACACAAAGCCTTCTCA+TGG | 0.602489 | 1_2:+2671806 | Msa0049370:CDS |
| AGGTATCTGCGCAAAGAGGG+TGG | 0.610561 | 1_2:+2671622 | Msa0049370:CDS |
| TTCAGGTATCTGCGCAAAGA+GGG | 0.610853 | 1_2:+2671619 | Msa0049370:CDS |
| ATATCAGCTAAACGATGCAT+AGG | 0.610957 | 1_2:+2673687 | Msa0049370:three_prime_UTR |
| CACAATATTCAGTCTCCTAG+AGG | 0.611494 | 1_2:-2673435 | None:intergenic |
| AGAGGGTGGTGATCGATGCA+AGG | 0.618099 | 1_2:+2671636 | Msa0049370:CDS |
| GGAGCTGGAGACAAAGAGGA+AGG | 0.618380 | 1_2:+2673029 | Msa0049370:intron |
| AGGGTGTTGAGGCTTCAAAA+GGG | 0.622262 | 1_2:+2672848 | Msa0049370:intron |
| CCTTGGACAATTGTCAGCAG+AGG | 0.626435 | 1_2:+2672886 | Msa0049370:CDS |
| TGTAGGGATTTAGACTACCA+TGG | 0.630509 | 1_2:+2673598 | Msa0049370:three_prime_UTR |
| GTTCAGGTATCTGCGCAAAG+AGG | 0.631106 | 1_2:+2671618 | Msa0049370:CDS |
| ATTCCACACAAGACAAAGCG+TGG | 0.632644 | 1_2:+2672648 | Msa0049370:CDS |
| AAGCTCCTTTGCAACGATGG+AGG | 0.638563 | 1_2:-2671681 | None:intergenic |
| GGAGCAAGAATTTCAAGTTG+GGG | 0.644018 | 1_2:-2673138 | None:intergenic |
| GAGGTTGGATGGAACTACGC+CGG | 0.652387 | 1_2:+2672905 | Msa0049370:CDS |
| TGAAATTTGAAAGACAACCA+TGG | 0.653290 | 1_2:-2673615 | None:intergenic |
| AAATGAATAGGACCATGAGA+AGG | 0.655070 | 1_2:-2671818 | None:intergenic |
| TCAGTACCAGAGTATTAAGA+CGG | 0.655946 | 1_2:-2673494 | None:intergenic |
| ACACAAGACAAAGCGTGGAG+AGG | 0.661685 | 1_2:+2672653 | Msa0049370:CDS |
| AGAGTATTAAGACGGACACA+AGG | 0.686499 | 1_2:-2673486 | None:intergenic |
| AGGCAAGTCTACCTAACATG+TGG | 0.695141 | 1_2:-2671661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTCATAAATCACATTT+TGG | + | chr1_2:2671995-2672014 | Msa0049370:intron | 15.0% |
| !!! | TATTGATTAATGTTTGTAAT+TGG | + | chr1_2:2672104-2672123 | Msa0049370:intron | 15.0% |
| !!! | TTAATTCATAAATCACATTT+TGG | + | chr1_2:2671995-2672014 | Msa0049370:intron | 15.0% |
| !!! | TATTGATTAATGTTTGTAAT+TGG | + | chr1_2:2672104-2672123 | Msa0049370:intron | 15.0% |
| !!! | TTTTTGTTAAATCGCATTTT+TGG | + | chr1_2:2671911-2671930 | Msa0049370:intron | 20.0% |
| !!! | GTTAAGTGATTTTTTTAATG+TGG | + | chr1_2:2672126-2672145 | Msa0049370:intron | 20.0% |
| !! | TTGTTTAGTGTTATAGTATT+TGG | + | chr1_2:2672232-2672251 | Msa0049370:intron | 20.0% |
| !!! | TTAATTTTTCTCTTGTTAAC+AGG | + | chr1_2:2673008-2673027 | Msa0049370:intron | 20.0% |
| !! | TAACATAAAGATTCATAGTA+TGG | - | chr1_2:2673397-2673416 | None:intergenic | 20.0% |
| !! | AAATTTCAATTTGAACAGTT+TGG | + | chr1_2:2673630-2673649 | Msa0049370:three_prime_UTR | 20.0% |
| !!! | TTTTTGTTAAATCGCATTTT+TGG | + | chr1_2:2671911-2671930 | Msa0049370:intron | 20.0% |
| !!! | GTTAAGTGATTTTTTTAATG+TGG | + | chr1_2:2672126-2672145 | Msa0049370:intron | 20.0% |
| !! | TTGTTTAGTGTTATAGTATT+TGG | + | chr1_2:2672232-2672251 | Msa0049370:intron | 20.0% |
| !!! | TTAATTTTTCTCTTGTTAAC+AGG | + | chr1_2:2673008-2673027 | Msa0049370:intron | 20.0% |
| !! | TAACATAAAGATTCATAGTA+TGG | - | chr1_2:2673397-2673416 | None:intergenic | 20.0% |
| !! | AAATTTCAATTTGAACAGTT+TGG | + | chr1_2:2673630-2673649 | Msa0049370:three_prime_UTR | 20.0% |
| ! | TGAAGTATATGAGATTTCTT+AGG | + | chr1_2:2671777-2671796 | Msa0049370:CDS | 25.0% |
| !!! | TATTACTAGGTTGTTGTTTT+TGG | + | chr1_2:2671935-2671954 | Msa0049370:intron | 25.0% |
| !!! | ACTGCATTTTTGATAATACT+AGG | + | chr1_2:2671964-2671983 | Msa0049370:intron | 25.0% |
| !! | ATCACATTTTGGATATTACT+AGG | + | chr1_2:2672006-2672025 | Msa0049370:intron | 25.0% |
| ! | TTAAAGATGAGTTGTTTAAG+AGG | + | chr1_2:2672155-2672174 | Msa0049370:intron | 25.0% |
| ! | TTGATTATTGTGTTCTTTGT+TGG | + | chr1_2:2672310-2672329 | Msa0049370:intron | 25.0% |
| !!! | TTGTGAATTGTGATGTTTTT+TGG | + | chr1_2:2672377-2672396 | Msa0049370:intron | 25.0% |
| !!! | TTGAAAGTTGTGTTCTTTTT+TGG | + | chr1_2:2672429-2672448 | Msa0049370:intron | 25.0% |
| !! | TGATATGTAATTGTTTTCGT+GGG | + | chr1_2:2672592-2672611 | Msa0049370:intron | 25.0% |
| !! | ATCCTCTTAATTTTGTCATA+TGG | - | chr1_2:2672720-2672739 | None:intergenic | 25.0% |
| ! | ATATGACAAAATTAAGAGGA+TGG | + | chr1_2:2672719-2672738 | Msa0049370:CDS | 25.0% |
| ! | GAATTTGAATACTGAATGAT+TGG | + | chr1_2:2672817-2672836 | Msa0049370:intron | 25.0% |
| ! | TGAATGATTGGATGAAATTA+GGG | + | chr1_2:2672829-2672848 | Msa0049370:intron | 25.0% |
| ! | TTGTACTTGATAAATAACAG+CGG | + | chr1_2:2672974-2672993 | Msa0049370:intron | 25.0% |
| ! | AAATACTACTCAGTACTTAA+CGG | - | chr1_2:2673163-2673182 | None:intergenic | 25.0% |
| !!! | ATTACTTTTTGATAGTGTGT+TGG | + | chr1_2:2673327-2673346 | Msa0049370:three_prime_UTR | 25.0% |
| !! | TGTGTATTTAAGATGCATAT+AGG | + | chr1_2:2673454-2673473 | Msa0049370:three_prime_UTR | 25.0% |
| ! | ATAATTTGACTATAAGCTGT+AGG | + | chr1_2:2673581-2673600 | Msa0049370:three_prime_UTR | 25.0% |
| ! | TAATTTGACTATAAGCTGTA+GGG | + | chr1_2:2673582-2673601 | Msa0049370:three_prime_UTR | 25.0% |
| ! | TGAAGTATATGAGATTTCTT+AGG | + | chr1_2:2671777-2671796 | Msa0049370:CDS | 25.0% |
| !!! | TATTACTAGGTTGTTGTTTT+TGG | + | chr1_2:2671935-2671954 | Msa0049370:intron | 25.0% |
| !!! | ACTGCATTTTTGATAATACT+AGG | + | chr1_2:2671964-2671983 | Msa0049370:intron | 25.0% |
| !! | ATCACATTTTGGATATTACT+AGG | + | chr1_2:2672006-2672025 | Msa0049370:intron | 25.0% |
| ! | TTAAAGATGAGTTGTTTAAG+AGG | + | chr1_2:2672155-2672174 | Msa0049370:intron | 25.0% |
| ! | TTGATTATTGTGTTCTTTGT+TGG | + | chr1_2:2672310-2672329 | Msa0049370:intron | 25.0% |
| !!! | TTGTGAATTGTGATGTTTTT+TGG | + | chr1_2:2672377-2672396 | Msa0049370:intron | 25.0% |
| !!! | TTGAAAGTTGTGTTCTTTTT+TGG | + | chr1_2:2672429-2672448 | Msa0049370:intron | 25.0% |
| !! | TGATATGTAATTGTTTTCGT+GGG | + | chr1_2:2672592-2672611 | Msa0049370:intron | 25.0% |
| !! | ATCCTCTTAATTTTGTCATA+TGG | - | chr1_2:2672720-2672739 | None:intergenic | 25.0% |
| ! | ATATGACAAAATTAAGAGGA+TGG | + | chr1_2:2672719-2672738 | Msa0049370:CDS | 25.0% |
| ! | GAATTTGAATACTGAATGAT+TGG | + | chr1_2:2672817-2672836 | Msa0049370:intron | 25.0% |
| ! | TGAATGATTGGATGAAATTA+GGG | + | chr1_2:2672829-2672848 | Msa0049370:intron | 25.0% |
| ! | TTGTACTTGATAAATAACAG+CGG | + | chr1_2:2672974-2672993 | Msa0049370:intron | 25.0% |
| ! | AAATACTACTCAGTACTTAA+CGG | - | chr1_2:2673163-2673182 | None:intergenic | 25.0% |
| !!! | ATTACTTTTTGATAGTGTGT+TGG | + | chr1_2:2673327-2673346 | Msa0049370:three_prime_UTR | 25.0% |
| !! | TGTGTATTTAAGATGCATAT+AGG | + | chr1_2:2673454-2673473 | Msa0049370:three_prime_UTR | 25.0% |
| ! | ATAATTTGACTATAAGCTGT+AGG | + | chr1_2:2673581-2673600 | Msa0049370:three_prime_UTR | 25.0% |
| ! | TAATTTGACTATAAGCTGTA+GGG | + | chr1_2:2673582-2673601 | Msa0049370:three_prime_UTR | 25.0% |
| ATATGAGATTTCTTAGGAAG+AGG | + | chr1_2:2671783-2671802 | Msa0049370:CDS | 30.0% | |
| ! | TCATGGTCCTATTCATTTTA+GGG | + | chr1_2:2671823-2671842 | Msa0049370:CDS | 30.0% |
| !! | TCGCATTTTTGGATATTACT+AGG | + | chr1_2:2671922-2671941 | Msa0049370:intron | 30.0% |
| ! | GTGTTATAGTATTTGGTGAA+TGG | + | chr1_2:2672239-2672258 | Msa0049370:intron | 30.0% |
| !!! | TGAAGTGTTGTCTTGTTTTT+TGG | + | chr1_2:2672267-2672286 | Msa0049370:intron | 30.0% |
| ATTATTGTGTTCTTTGTTGG+AGG | + | chr1_2:2672313-2672332 | Msa0049370:intron | 30.0% | |
| TTATTGTGTTCTTTGTTGGA+GGG | + | chr1_2:2672314-2672333 | Msa0049370:intron | 30.0% | |
| !!! | TGAATTGTGATGTTTTTTGG+AGG | + | chr1_2:2672380-2672399 | Msa0049370:intron | 30.0% |
| !!! | GAATTGTGATGTTTTTTGGA+GGG | + | chr1_2:2672381-2672400 | Msa0049370:intron | 30.0% |
| !!! | AAAGTTGTGTTCTTTTTTGG+AGG | + | chr1_2:2672432-2672451 | Msa0049370:intron | 30.0% |
| TTGTATGATGTGTTCTTGTT+TGG | + | chr1_2:2672485-2672504 | Msa0049370:intron | 30.0% | |
| ! | GTGATATGTAATTGTTTTCG+TGG | + | chr1_2:2672591-2672610 | Msa0049370:intron | 30.0% |
| ! | TTAATTTTGTCATATGGAGG+TGG | - | chr1_2:2672714-2672733 | None:intergenic | 30.0% |
| ! | CTCTTAATTTTGTCATATGG+AGG | - | chr1_2:2672717-2672736 | None:intergenic | 30.0% |
| CTCCATATGACAAAATTAAG+AGG | + | chr1_2:2672715-2672734 | Msa0049370:CDS | 30.0% | |
| !! | AATACTTACTTAAGAGCATC+GGG | - | chr1_2:2672750-2672769 | None:intergenic | 30.0% |
| ! | CAATACTTACTTAAGAGCAT+CGG | - | chr1_2:2672751-2672770 | None:intergenic | 30.0% |
| CTGAATGATTGGATGAAATT+AGG | + | chr1_2:2672828-2672847 | Msa0049370:intron | 30.0% | |
| AGAAGCAGATCAATAAATTG+AGG | + | chr1_2:2673079-2673098 | Msa0049370:CDS | 30.0% | |
| GAAGCAGATCAATAAATTGA+GGG | + | chr1_2:2673080-2673099 | Msa0049370:CDS | 30.0% | |
| AATACTACTCAGTACTTAAC+GGG | - | chr1_2:2673162-2673181 | None:intergenic | 30.0% | |
| ! | ATCGAATTCCATTTCAGTTT+TGG | + | chr1_2:2673220-2673239 | Msa0049370:three_prime_UTR | 30.0% |
| AATAACGACCAAAACTGAAA+TGG | - | chr1_2:2673231-2673250 | None:intergenic | 30.0% | |
| GGTCGTTATTTAATGTTTGT+TGG | + | chr1_2:2673241-2673260 | Msa0049370:three_prime_UTR | 30.0% | |
| ! | TACTCTAGAAATGACAATCT+TGG | + | chr1_2:2673264-2673283 | Msa0049370:three_prime_UTR | 30.0% |
| ! | CGTATATTTGGATTTGTTTG+TGG | + | chr1_2:2673366-2673385 | Msa0049370:three_prime_UTR | 30.0% |
| CTTTATGTTAGTTGTTCGAT+TGG | + | chr1_2:2673407-2673426 | Msa0049370:three_prime_UTR | 30.0% | |
| GCAATCGAAGCAATATTATA+AGG | + | chr1_2:2673538-2673557 | Msa0049370:three_prime_UTR | 30.0% | |
| TGAAATTTGAAAGACAACCA+TGG | - | chr1_2:2673618-2673637 | None:intergenic | 30.0% | |
| ATATGAGATTTCTTAGGAAG+AGG | + | chr1_2:2671783-2671802 | Msa0049370:CDS | 30.0% | |
| ! | TCATGGTCCTATTCATTTTA+GGG | + | chr1_2:2671823-2671842 | Msa0049370:CDS | 30.0% |
| !! | TCGCATTTTTGGATATTACT+AGG | + | chr1_2:2671922-2671941 | Msa0049370:intron | 30.0% |
| ! | GTGTTATAGTATTTGGTGAA+TGG | + | chr1_2:2672239-2672258 | Msa0049370:intron | 30.0% |
| !!! | TGAAGTGTTGTCTTGTTTTT+TGG | + | chr1_2:2672267-2672286 | Msa0049370:intron | 30.0% |
| ATTATTGTGTTCTTTGTTGG+AGG | + | chr1_2:2672313-2672332 | Msa0049370:intron | 30.0% | |
| TTATTGTGTTCTTTGTTGGA+GGG | + | chr1_2:2672314-2672333 | Msa0049370:intron | 30.0% | |
| !!! | TGAATTGTGATGTTTTTTGG+AGG | + | chr1_2:2672380-2672399 | Msa0049370:intron | 30.0% |
| !!! | GAATTGTGATGTTTTTTGGA+GGG | + | chr1_2:2672381-2672400 | Msa0049370:intron | 30.0% |
| !!! | AAAGTTGTGTTCTTTTTTGG+AGG | + | chr1_2:2672432-2672451 | Msa0049370:intron | 30.0% |
| TTGTATGATGTGTTCTTGTT+TGG | + | chr1_2:2672485-2672504 | Msa0049370:intron | 30.0% | |
| ! | GTGATATGTAATTGTTTTCG+TGG | + | chr1_2:2672591-2672610 | Msa0049370:intron | 30.0% |
| ! | TTAATTTTGTCATATGGAGG+TGG | - | chr1_2:2672714-2672733 | None:intergenic | 30.0% |
| ! | CTCTTAATTTTGTCATATGG+AGG | - | chr1_2:2672717-2672736 | None:intergenic | 30.0% |
| CTCCATATGACAAAATTAAG+AGG | + | chr1_2:2672715-2672734 | Msa0049370:CDS | 30.0% | |
| !! | AATACTTACTTAAGAGCATC+GGG | - | chr1_2:2672750-2672769 | None:intergenic | 30.0% |
| ! | CAATACTTACTTAAGAGCAT+CGG | - | chr1_2:2672751-2672770 | None:intergenic | 30.0% |
| CTGAATGATTGGATGAAATT+AGG | + | chr1_2:2672828-2672847 | Msa0049370:intron | 30.0% | |
| AGAAGCAGATCAATAAATTG+AGG | + | chr1_2:2673079-2673098 | Msa0049370:CDS | 30.0% | |
| GAAGCAGATCAATAAATTGA+GGG | + | chr1_2:2673080-2673099 | Msa0049370:CDS | 30.0% | |
| AATACTACTCAGTACTTAAC+GGG | - | chr1_2:2673162-2673181 | None:intergenic | 30.0% | |
| ! | ATCGAATTCCATTTCAGTTT+TGG | + | chr1_2:2673220-2673239 | Msa0049370:three_prime_UTR | 30.0% |
| AATAACGACCAAAACTGAAA+TGG | - | chr1_2:2673231-2673250 | None:intergenic | 30.0% | |
| GGTCGTTATTTAATGTTTGT+TGG | + | chr1_2:2673241-2673260 | Msa0049370:three_prime_UTR | 30.0% | |
| ! | TACTCTAGAAATGACAATCT+TGG | + | chr1_2:2673264-2673283 | Msa0049370:three_prime_UTR | 30.0% |
| ! | CGTATATTTGGATTTGTTTG+TGG | + | chr1_2:2673366-2673385 | Msa0049370:three_prime_UTR | 30.0% |
| CTTTATGTTAGTTGTTCGAT+TGG | + | chr1_2:2673407-2673426 | Msa0049370:three_prime_UTR | 30.0% | |
| GCAATCGAAGCAATATTATA+AGG | + | chr1_2:2673538-2673557 | Msa0049370:three_prime_UTR | 30.0% | |
| TGAAATTTGAAAGACAACCA+TGG | - | chr1_2:2673618-2673637 | None:intergenic | 30.0% | |
| GATCTTCTTCTTCTTCTTTG+TGG | - | chr1_2:2671580-2671599 | None:intergenic | 35.0% | |
| AGAAGAAGATCGAGCAAAAA+TGG | + | chr1_2:2671589-2671608 | Msa0049370:exon | 35.0% | |
| AAATGAATAGGACCATGAGA+AGG | - | chr1_2:2671821-2671840 | None:intergenic | 35.0% | |
| ! | CTCATGGTCCTATTCATTTT+AGG | + | chr1_2:2671822-2671841 | Msa0049370:CDS | 35.0% |
| ! | TATGATGTGTTCTTGTTTGG+AGG | + | chr1_2:2672488-2672507 | Msa0049370:intron | 35.0% |
| ! | ATGATGTGTTCTTGTTTGGA+GGG | + | chr1_2:2672489-2672508 | Msa0049370:intron | 35.0% |
| ! | TGAGTGATCTGTTGTTGTTA+TGG | + | chr1_2:2672534-2672553 | Msa0049370:intron | 35.0% |
| ! | TGATCTGTTGTTGTTATGGA+GGG | + | chr1_2:2672538-2672557 | Msa0049370:intron | 35.0% |
| TTGGTGTAACGTCGTATATT+TGG | + | chr1_2:2673354-2673373 | Msa0049370:three_prime_UTR | 35.0% | |
| ! | TCAGTACCAGAGTATTAAGA+CGG | - | chr1_2:2673497-2673516 | None:intergenic | 35.0% |
| TATCAGCTTATGACGAAACT+CGG | - | chr1_2:2673564-2673583 | None:intergenic | 35.0% | |
| CAAGATTCTCAGAATTCTGA+TGG | + | chr1_2:2673664-2673683 | Msa0049370:three_prime_UTR | 35.0% | |
| ATATCAGCTAAACGATGCAT+AGG | + | chr1_2:2673687-2673706 | Msa0049370:three_prime_UTR | 35.0% | |
| GATCTTCTTCTTCTTCTTTG+TGG | - | chr1_2:2671580-2671599 | None:intergenic | 35.0% | |
| AGAAGAAGATCGAGCAAAAA+TGG | + | chr1_2:2671589-2671608 | Msa0049370:exon | 35.0% | |
| AAATGAATAGGACCATGAGA+AGG | - | chr1_2:2671821-2671840 | None:intergenic | 35.0% | |
| ! | CTCATGGTCCTATTCATTTT+AGG | + | chr1_2:2671822-2671841 | Msa0049370:CDS | 35.0% |
| ! | TATGATGTGTTCTTGTTTGG+AGG | + | chr1_2:2672488-2672507 | Msa0049370:intron | 35.0% |
| ! | ATGATGTGTTCTTGTTTGGA+GGG | + | chr1_2:2672489-2672508 | Msa0049370:intron | 35.0% |
| ! | TGAGTGATCTGTTGTTGTTA+TGG | + | chr1_2:2672534-2672553 | Msa0049370:intron | 35.0% |
| ! | TGATCTGTTGTTGTTATGGA+GGG | + | chr1_2:2672538-2672557 | Msa0049370:intron | 35.0% |
| TTGGTGTAACGTCGTATATT+TGG | + | chr1_2:2673354-2673373 | Msa0049370:three_prime_UTR | 35.0% | |
| ! | TCAGTACCAGAGTATTAAGA+CGG | - | chr1_2:2673497-2673516 | None:intergenic | 35.0% |
| TATCAGCTTATGACGAAACT+CGG | - | chr1_2:2673564-2673583 | None:intergenic | 35.0% | |
| CAAGATTCTCAGAATTCTGA+TGG | + | chr1_2:2673664-2673683 | Msa0049370:three_prime_UTR | 35.0% | |
| ATATCAGCTAAACGATGCAT+AGG | + | chr1_2:2673687-2673706 | Msa0049370:three_prime_UTR | 35.0% | |
| TCTTCTTCTTCTTTGTGGCT+CGG | - | chr1_2:2671575-2671594 | None:intergenic | 40.0% | |
| TGTGAAGAGATTTGTGCTTC+TGG | + | chr1_2:2671734-2671753 | Msa0049370:CDS | 40.0% | |
| ATGAACACAAAGCCTTCTCA+TGG | + | chr1_2:2671806-2671825 | Msa0049370:CDS | 40.0% | |
| GTACGCCAAAAGATCTTACT+GGG | - | chr1_2:2671851-2671870 | None:intergenic | 40.0% | |
| AGTACGCCAAAAGATCTTAC+TGG | - | chr1_2:2671852-2671871 | None:intergenic | 40.0% | |
| ! | GTGATCTGTTGTTGTTATGG+AGG | + | chr1_2:2672537-2672556 | Msa0049370:intron | 40.0% |
| !! | TGGATGAAATTAGGGTGTTG+AGG | + | chr1_2:2672837-2672856 | Msa0049370:intron | 40.0% |
| ! | ACCATCAAGGTGCGTTATTT+TGG | + | chr1_2:2672929-2672948 | Msa0049370:intron | 40.0% |
| ACCAAAATAACGCACCTTGA+TGG | - | chr1_2:2672933-2672952 | None:intergenic | 40.0% | |
| TTTCTCTTGTTAACAGGAGC+TGG | + | chr1_2:2673014-2673033 | Msa0049370:intron | 40.0% | |
| !! | GGAGCAAGAATTTCAAGTTG+GGG | - | chr1_2:2673141-2673160 | None:intergenic | 40.0% |
| !! | GGGAGCAAGAATTTCAAGTT+GGG | - | chr1_2:2673142-2673161 | None:intergenic | 40.0% |
| !! | TTGATAGTGTGTTGGCTCTT+TGG | + | chr1_2:2673335-2673354 | Msa0049370:three_prime_UTR | 40.0% |
| CACAATATTCAGTCTCCTAG+AGG | - | chr1_2:2673438-2673457 | None:intergenic | 40.0% | |
| ! | AGAGTATTAAGACGGACACA+AGG | - | chr1_2:2673489-2673508 | None:intergenic | 40.0% |
| TTGTGTCCGTCTTAATACTC+TGG | + | chr1_2:2673488-2673507 | Msa0049370:three_prime_UTR | 40.0% | |
| TGTAGGGATTTAGACTACCA+TGG | + | chr1_2:2673598-2673617 | Msa0049370:three_prime_UTR | 40.0% | |
| TCTTCTTCTTCTTTGTGGCT+CGG | - | chr1_2:2671575-2671594 | None:intergenic | 40.0% | |
| TGTGAAGAGATTTGTGCTTC+TGG | + | chr1_2:2671734-2671753 | Msa0049370:CDS | 40.0% | |
| ATGAACACAAAGCCTTCTCA+TGG | + | chr1_2:2671806-2671825 | Msa0049370:CDS | 40.0% | |
| GTACGCCAAAAGATCTTACT+GGG | - | chr1_2:2671851-2671870 | None:intergenic | 40.0% | |
| AGTACGCCAAAAGATCTTAC+TGG | - | chr1_2:2671852-2671871 | None:intergenic | 40.0% | |
| ! | GTGATCTGTTGTTGTTATGG+AGG | + | chr1_2:2672537-2672556 | Msa0049370:intron | 40.0% |
| !! | TGGATGAAATTAGGGTGTTG+AGG | + | chr1_2:2672837-2672856 | Msa0049370:intron | 40.0% |
| ! | ACCATCAAGGTGCGTTATTT+TGG | + | chr1_2:2672929-2672948 | Msa0049370:intron | 40.0% |
| ACCAAAATAACGCACCTTGA+TGG | - | chr1_2:2672933-2672952 | None:intergenic | 40.0% | |
| TTTCTCTTGTTAACAGGAGC+TGG | + | chr1_2:2673014-2673033 | Msa0049370:intron | 40.0% | |
| !! | GGAGCAAGAATTTCAAGTTG+GGG | - | chr1_2:2673141-2673160 | None:intergenic | 40.0% |
| !! | GGGAGCAAGAATTTCAAGTT+GGG | - | chr1_2:2673142-2673161 | None:intergenic | 40.0% |
| !! | TTGATAGTGTGTTGGCTCTT+TGG | + | chr1_2:2673335-2673354 | Msa0049370:three_prime_UTR | 40.0% |
| CACAATATTCAGTCTCCTAG+AGG | - | chr1_2:2673438-2673457 | None:intergenic | 40.0% | |
| ! | AGAGTATTAAGACGGACACA+AGG | - | chr1_2:2673489-2673508 | None:intergenic | 40.0% |
| TTGTGTCCGTCTTAATACTC+TGG | + | chr1_2:2673488-2673507 | Msa0049370:three_prime_UTR | 40.0% | |
| TGTAGGGATTTAGACTACCA+TGG | + | chr1_2:2673598-2673617 | Msa0049370:three_prime_UTR | 40.0% | |
| GATCGAGCAAAAATGGTGTC+TGG | + | chr1_2:2671596-2671615 | Msa0049370:exon | 45.0% | |
| ! | GCAAAAATGGTGTCTGGTTC+AGG | + | chr1_2:2671602-2671621 | Msa0049370:exon | 45.0% |
| TTCAGGTATCTGCGCAAAGA+GGG | + | chr1_2:2671619-2671638 | Msa0049370:CDS | 45.0% | |
| AGGCAAGTCTACCTAACATG+TGG | - | chr1_2:2671664-2671683 | None:intergenic | 45.0% | |
| GTTGCAAAGGAGCTTCTCAA+TGG | + | chr1_2:2671689-2671708 | Msa0049370:CDS | 45.0% | |
| GAAGAGATTTGTGCTTCTGG+TGG | + | chr1_2:2671737-2671756 | Msa0049370:CDS | 45.0% | |
| CTGGGAGCCCTAAAATGAAT+AGG | - | chr1_2:2671833-2671852 | None:intergenic | 45.0% | |
| ! | ATCTTTTGGCGTACTGTTCG+TGG | + | chr1_2:2671857-2671876 | Msa0049370:CDS | 45.0% |
| ! | TCTTTTGGCGTACTGTTCGT+GGG | + | chr1_2:2671858-2671877 | Msa0049370:CDS | 45.0% |
| ATTCCACACAAGACAAAGCG+TGG | + | chr1_2:2672648-2672667 | Msa0049370:CDS | 45.0% | |
| ACCTTCATACACCTTCATCC+TGG | - | chr1_2:2672688-2672707 | None:intergenic | 45.0% | |
| !! | TAGGGTGTTGAGGCTTCAAA+AGG | + | chr1_2:2672847-2672866 | Msa0049370:intron | 45.0% |
| !! | AGGGTGTTGAGGCTTCAAAA+GGG | + | chr1_2:2672848-2672867 | Msa0049370:intron | 45.0% |
| CTCTGCTGACAATTGTCCAA+GGG | - | chr1_2:2672888-2672907 | None:intergenic | 45.0% | |
| AATTGTCAGCAGAGGTTGGA+TGG | + | chr1_2:2672894-2672913 | Msa0049370:CDS | 45.0% | |
| TGGAGACAAAGAGGAAGGAA+AGG | + | chr1_2:2673034-2673053 | Msa0049370:CDS | 45.0% | |
| GGAGACAAAGAGGAAGGAAA+GGG | + | chr1_2:2673035-2673054 | Msa0049370:CDS | 45.0% | |
| ! | CGGGAGCAAGAATTTCAAGT+TGG | - | chr1_2:2673143-2673162 | None:intergenic | 45.0% |
| !!! | GTTCGATTGGTTTTGCCTCT+AGG | + | chr1_2:2673420-2673439 | Msa0049370:three_prime_UTR | 45.0% |
| GATCGAGCAAAAATGGTGTC+TGG | + | chr1_2:2671596-2671615 | Msa0049370:exon | 45.0% | |
| ! | GCAAAAATGGTGTCTGGTTC+AGG | + | chr1_2:2671602-2671621 | Msa0049370:exon | 45.0% |
| TTCAGGTATCTGCGCAAAGA+GGG | + | chr1_2:2671619-2671638 | Msa0049370:CDS | 45.0% | |
| AGGCAAGTCTACCTAACATG+TGG | - | chr1_2:2671664-2671683 | None:intergenic | 45.0% | |
| GTTGCAAAGGAGCTTCTCAA+TGG | + | chr1_2:2671689-2671708 | Msa0049370:CDS | 45.0% | |
| GAAGAGATTTGTGCTTCTGG+TGG | + | chr1_2:2671737-2671756 | Msa0049370:CDS | 45.0% | |
| CTGGGAGCCCTAAAATGAAT+AGG | - | chr1_2:2671833-2671852 | None:intergenic | 45.0% | |
| ! | ATCTTTTGGCGTACTGTTCG+TGG | + | chr1_2:2671857-2671876 | Msa0049370:CDS | 45.0% |
| ! | TCTTTTGGCGTACTGTTCGT+GGG | + | chr1_2:2671858-2671877 | Msa0049370:CDS | 45.0% |
| ATTCCACACAAGACAAAGCG+TGG | + | chr1_2:2672648-2672667 | Msa0049370:CDS | 45.0% | |
| ACCTTCATACACCTTCATCC+TGG | - | chr1_2:2672688-2672707 | None:intergenic | 45.0% | |
| !! | TAGGGTGTTGAGGCTTCAAA+AGG | + | chr1_2:2672847-2672866 | Msa0049370:intron | 45.0% |
| !! | AGGGTGTTGAGGCTTCAAAA+GGG | + | chr1_2:2672848-2672867 | Msa0049370:intron | 45.0% |
| CTCTGCTGACAATTGTCCAA+GGG | - | chr1_2:2672888-2672907 | None:intergenic | 45.0% | |
| AATTGTCAGCAGAGGTTGGA+TGG | + | chr1_2:2672894-2672913 | Msa0049370:CDS | 45.0% | |
| TGGAGACAAAGAGGAAGGAA+AGG | + | chr1_2:2673034-2673053 | Msa0049370:CDS | 45.0% | |
| GGAGACAAAGAGGAAGGAAA+GGG | + | chr1_2:2673035-2673054 | Msa0049370:CDS | 45.0% | |
| ! | CGGGAGCAAGAATTTCAAGT+TGG | - | chr1_2:2673143-2673162 | None:intergenic | 45.0% |
| !!! | GTTCGATTGGTTTTGCCTCT+AGG | + | chr1_2:2673420-2673439 | Msa0049370:three_prime_UTR | 45.0% |
| GTTCAGGTATCTGCGCAAAG+AGG | + | chr1_2:2671618-2671637 | Msa0049370:CDS | 50.0% | |
| ! | GATGCAAGGCACCACATGTT+AGG | + | chr1_2:2671650-2671669 | Msa0049370:CDS | 50.0% |
| ACTTGCCTCCATCGTTGCAA+AGG | + | chr1_2:2671676-2671695 | Msa0049370:CDS | 50.0% | |
| AAGCTCCTTTGCAACGATGG+AGG | - | chr1_2:2671684-2671703 | None:intergenic | 50.0% | |
| GAGAAGCTCCTTTGCAACGA+TGG | - | chr1_2:2671687-2671706 | None:intergenic | 50.0% | |
| GGAGCTTCTCAATGGACAGA+AGG | + | chr1_2:2671697-2671716 | Msa0049370:CDS | 50.0% | |
| !! | GTGCTTCTGGTGGTCTTGTT+AGG | + | chr1_2:2671747-2671766 | Msa0049370:CDS | 50.0% |
| ! | GGGCTCCCAGTAAGATCTTT+TGG | + | chr1_2:2671843-2671862 | Msa0049370:CDS | 50.0% |
| TCTCCACGCTTTGTCTTGTG+TGG | - | chr1_2:2672654-2672673 | None:intergenic | 50.0% | |
| ACACAAGACAAAGCGTGGAG+AGG | + | chr1_2:2672653-2672672 | Msa0049370:CDS | 50.0% | |
| ! | GCCAGGATGAAGGTGTATGA+AGG | + | chr1_2:2672684-2672703 | Msa0049370:CDS | 50.0% |
| GGTCACAAATACTGCACCCT+TGG | + | chr1_2:2672869-2672888 | Msa0049370:CDS | 50.0% | |
| CCTCTGCTGACAATTGTCCA+AGG | - | chr1_2:2672889-2672908 | None:intergenic | 50.0% | |
| CCTTGGACAATTGTCAGCAG+AGG | + | chr1_2:2672886-2672905 | Msa0049370:CDS | 50.0% | |
| GGACAATTGTCAGCAGAGGT+TGG | + | chr1_2:2672890-2672909 | Msa0049370:CDS | 50.0% | |
| !! | ATAACGCACCTTGATGGTGC+CGG | - | chr1_2:2672927-2672946 | None:intergenic | 50.0% |
| AACAGGAGCTGGAGACAAAG+AGG | + | chr1_2:2673025-2673044 | Msa0049370:intron | 50.0% | |
| GTTCAGGTATCTGCGCAAAG+AGG | + | chr1_2:2671618-2671637 | Msa0049370:CDS | 50.0% | |
| ! | GATGCAAGGCACCACATGTT+AGG | + | chr1_2:2671650-2671669 | Msa0049370:CDS | 50.0% |
| ACTTGCCTCCATCGTTGCAA+AGG | + | chr1_2:2671676-2671695 | Msa0049370:CDS | 50.0% | |
| AAGCTCCTTTGCAACGATGG+AGG | - | chr1_2:2671684-2671703 | None:intergenic | 50.0% | |
| GAGAAGCTCCTTTGCAACGA+TGG | - | chr1_2:2671687-2671706 | None:intergenic | 50.0% | |
| GGAGCTTCTCAATGGACAGA+AGG | + | chr1_2:2671697-2671716 | Msa0049370:CDS | 50.0% | |
| !! | GTGCTTCTGGTGGTCTTGTT+AGG | + | chr1_2:2671747-2671766 | Msa0049370:CDS | 50.0% |
| ! | GGGCTCCCAGTAAGATCTTT+TGG | + | chr1_2:2671843-2671862 | Msa0049370:CDS | 50.0% |
| TCTCCACGCTTTGTCTTGTG+TGG | - | chr1_2:2672654-2672673 | None:intergenic | 50.0% | |
| ACACAAGACAAAGCGTGGAG+AGG | + | chr1_2:2672653-2672672 | Msa0049370:CDS | 50.0% | |
| ! | GCCAGGATGAAGGTGTATGA+AGG | + | chr1_2:2672684-2672703 | Msa0049370:CDS | 50.0% |
| GGTCACAAATACTGCACCCT+TGG | + | chr1_2:2672869-2672888 | Msa0049370:CDS | 50.0% | |
| CCTCTGCTGACAATTGTCCA+AGG | - | chr1_2:2672889-2672908 | None:intergenic | 50.0% | |
| CCTTGGACAATTGTCAGCAG+AGG | + | chr1_2:2672886-2672905 | Msa0049370:CDS | 50.0% | |
| GGACAATTGTCAGCAGAGGT+TGG | + | chr1_2:2672890-2672909 | Msa0049370:CDS | 50.0% | |
| !! | ATAACGCACCTTGATGGTGC+CGG | - | chr1_2:2672927-2672946 | None:intergenic | 50.0% |
| AACAGGAGCTGGAGACAAAG+AGG | + | chr1_2:2673025-2673044 | Msa0049370:intron | 50.0% | |
| AGGTATCTGCGCAAAGAGGG+TGG | + | chr1_2:2671622-2671641 | Msa0049370:CDS | 55.0% | |
| AGAGGGTGGTGATCGATGCA+AGG | + | chr1_2:2671636-2671655 | Msa0049370:CDS | 55.0% | |
| GAGGTTGGATGGAACTACGC+CGG | + | chr1_2:2672905-2672924 | Msa0049370:CDS | 55.0% | |
| GGAGCTGGAGACAAAGAGGA+AGG | + | chr1_2:2673029-2673048 | Msa0049370:intron | 55.0% | |
| AGGTATCTGCGCAAAGAGGG+TGG | + | chr1_2:2671622-2671641 | Msa0049370:CDS | 55.0% | |
| AGAGGGTGGTGATCGATGCA+AGG | + | chr1_2:2671636-2671655 | Msa0049370:CDS | 55.0% | |
| GAGGTTGGATGGAACTACGC+CGG | + | chr1_2:2672905-2672924 | Msa0049370:CDS | 55.0% | |
| GGAGCTGGAGACAAAGAGGA+AGG | + | chr1_2:2673029-2673048 | Msa0049370:intron | 55.0% | |
| GGCTGCACTTGCCAGGATGA+AGG | + | chr1_2:2672674-2672693 | Msa0049370:CDS | 60.0% | |
| GAACTACGCCGGCACCATCA+AGG | + | chr1_2:2672916-2672935 | Msa0049370:CDS | 60.0% | |
| GGCTGCACTTGCCAGGATGA+AGG | + | chr1_2:2672674-2672693 | Msa0049370:CDS | 60.0% | |
| GAACTACGCCGGCACCATCA+AGG | + | chr1_2:2672916-2672935 | Msa0049370:CDS | 60.0% | |
| GTGGAGAGGCTGCACTTGCC+AGG | + | chr1_2:2672667-2672686 | Msa0049370:CDS | 65.0% | |
| GTGGAGAGGCTGCACTTGCC+AGG | + | chr1_2:2672667-2672686 | Msa0049370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 2671570 | 2673711 | 2671570 | ID=Msa0049370;Name=Msa0049370 |
| chr1_2 | mRNA | 2671570 | 2673711 | 2671570 | ID=Msa0049370-mRNA-1;Parent=Msa0049370;Name=Msa0049370-mRNA-1;_AED=0.02;_eAED=0.02;_QI=38|1|1|1|1|1|4|538|206 |
| chr1_2 | exon | 2671570 | 2671879 | 2671570 | ID=Msa0049370-mRNA-1:exon:552;Parent=Msa0049370-mRNA-1 |
| chr1_2 | exon | 2672644 | 2672760 | 2672644 | ID=Msa0049370-mRNA-1:exon:553;Parent=Msa0049370-mRNA-1 |
| chr1_2 | exon | 2672850 | 2672937 | 2672850 | ID=Msa0049370-mRNA-1:exon:554;Parent=Msa0049370-mRNA-1 |
| chr1_2 | exon | 2673030 | 2673711 | 2673030 | ID=Msa0049370-mRNA-1:exon:555;Parent=Msa0049370-mRNA-1 |
| chr1_2 | five_prime_UTR | 2671570 | 2671607 | 2671570 | ID=Msa0049370-mRNA-1:five_prime_utr;Parent=Msa0049370-mRNA-1 |
| chr1_2 | CDS | 2671608 | 2671879 | 2671608 | ID=Msa0049370-mRNA-1:cds;Parent=Msa0049370-mRNA-1 |
| chr1_2 | CDS | 2672644 | 2672760 | 2672644 | ID=Msa0049370-mRNA-1:cds;Parent=Msa0049370-mRNA-1 |
| chr1_2 | CDS | 2672850 | 2672937 | 2672850 | ID=Msa0049370-mRNA-1:cds;Parent=Msa0049370-mRNA-1 |
| chr1_2 | CDS | 2673030 | 2673173 | 2673030 | ID=Msa0049370-mRNA-1:cds;Parent=Msa0049370-mRNA-1 |
| chr1_2 | three_prime_UTR | 2673174 | 2673711 | 2673174 | ID=Msa0049370-mRNA-1:three_prime_utr;Parent=Msa0049370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
