Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0991230 | ABE88103.1 | 84.950 | 299 | 45 | 0 | 1 | 299 | 101 | 399 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0991230 | sp|Q9HSF6|RNH_HALSA | 35.385 | 130 | 82 | 1 | 113 | 240 | 64 | 193 | 5.72e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0991230 | Q1S5K3 | 84.950 | 299 | 45 | 0 | 1 | 299 | 101 | 399 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0745060 | Msa0991230 | 0.800006 | 1.764521e-48 | -8.615850e-47 |
| Msa0811080 | Msa0991230 | 0.807998 | 3.843164e-50 | -8.615850e-47 |
| Msa0991230 | Msa1077460 | 0.812987 | 3.214377e-51 | -8.615850e-47 |
| Msa0991230 | Msa1096580 | 0.801340 | 9.431518e-49 | -8.615850e-47 |
| Msa0991230 | Msa1164120 | 0.801380 | 9.255048e-49 | -8.615850e-47 |
| Msa0991230 | Msa1187940 | 0.822869 | 1.880187e-53 | -8.615850e-47 |
| Msa0342240 | Msa0991230 | 0.801735 | 7.824395e-49 | -8.615850e-47 |
| Msa0886750 | Msa0991230 | 0.807754 | 4.331758e-50 | -8.615850e-47 |
| Msa0887990 | Msa0991230 | 0.805901 | 1.067001e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0991230 | MtrunA17_Chr1g0158081 | 85.619 | 299 | 43 | 0 | 1 | 299 | 1089 | 1387 | 0.0 | 545 |
| Msa0991230 | MtrunA17_Chr3g0110591 | 82.266 | 203 | 36 | 0 | 97 | 299 | 1 | 203 | 4.04e-121 | 355 |
| Msa0991230 | MtrunA17_Chr2g0325301 | 35.294 | 119 | 75 | 1 | 121 | 237 | 13 | 131 | 4.21e-16 | 74.3 |
| Msa0991230 | MtrunA17_Chr7g0264421 | 36.066 | 122 | 76 | 1 | 123 | 242 | 209 | 330 | 2.54e-13 | 69.7 |
| Msa0991230 | MtrunA17_Chr6g0451411 | 34.746 | 118 | 75 | 1 | 121 | 236 | 179 | 296 | 4.28e-13 | 68.9 |
| Msa0991230 | MtrunA17_Chr6g0451421 | 34.109 | 129 | 81 | 3 | 121 | 246 | 11 | 138 | 2.35e-12 | 63.9 |
| Msa0991230 | MtrunA17_Chr2g0329701 | 36.885 | 122 | 75 | 1 | 123 | 242 | 239 | 360 | 2.45e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0991230 | AT3G01410.2 | 34.483 | 116 | 74 | 1 | 123 | 236 | 159 | 274 | 2.02e-15 | 75.9 |
| Msa0991230 | AT3G01410.1 | 34.483 | 116 | 74 | 1 | 123 | 236 | 159 | 274 | 2.02e-15 | 75.9 |
| Msa0991230 | AT1G24090.1 | 36.066 | 122 | 76 | 1 | 123 | 242 | 221 | 342 | 1.66e-12 | 67.8 |
Find 74 sgRNAs with CRISPR-Local
Find 918 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAAGCCTGCTGTTAC+TGG | 0.212074 | 6_4:+54951991 | Msa0991230:CDS |
| CACCAATCCCCATTTGCTAT+TGG | 0.270568 | 6_4:-54952223 | None:intergenic |
| ACCAATCCCCATTTGCTATT+GGG | 0.276039 | 6_4:-54952222 | None:intergenic |
| CAAACGCCTGCGTCATTATA+TGG | 0.305730 | 6_4:+54951918 | Msa0991230:CDS |
| AATGCTTATGGTAAAGGAAT+TGG | 0.314226 | 6_4:+54952261 | Msa0991230:CDS |
| GATGGTGCTGTTAATGCTTA+TGG | 0.320487 | 6_4:+54952249 | Msa0991230:CDS |
| AAGCCGCTGCACTTTGATTA+CGG | 0.328562 | 6_4:-54952640 | None:intergenic |
| ACTTGTCATTAATCAGATAA+AGG | 0.344219 | 6_4:+54952443 | Msa0991230:CDS |
| ATTAAGCACCTTGACATCTA+TGG | 0.344859 | 6_4:+54952411 | Msa0991230:CDS |
| GTGCTTAATTCTCAGGTCAT+TGG | 0.392010 | 6_4:-54952397 | None:intergenic |
| AGCCGCTGCACTTTGATTAC+GGG | 0.397374 | 6_4:-54952639 | None:intergenic |
| TGTACTTGATTGGATCCATT+CGG | 0.404708 | 6_4:-54951966 | None:intergenic |
| AGACTTGTTGTGCTCTAGCT+TGG | 0.416173 | 6_4:+54951890 | Msa0991230:CDS |
| GTACTTGATTGGATCCATTC+GGG | 0.417913 | 6_4:-54951965 | None:intergenic |
| TGAATATGAAGCATGTATCT+TGG | 0.419010 | 6_4:+54952362 | Msa0991230:CDS |
| CATATAATGACGCAGGCGTT+TGG | 0.424405 | 6_4:-54951917 | None:intergenic |
| CTTGTCATTAATCAGATAAA+GGG | 0.436762 | 6_4:+54952444 | Msa0991230:CDS |
| CCCCATTTGCTATTGGGGTC+CGG | 0.439131 | 6_4:-54952216 | None:intergenic |
| AGATACATGATCTCTTCATC+AGG | 0.439856 | 6_4:-54952153 | None:intergenic |
| ACGTCTTCATCAGTTTGATC+TGG | 0.440834 | 6_4:-54952699 | None:intergenic |
| TCAGGGAAGTCAAACTTAAT+CGG | 0.444503 | 6_4:-54952135 | None:intergenic |
| CTATGTTTCGTGTCAATCAC+TGG | 0.448847 | 6_4:+54952607 | Msa0991230:CDS |
| GGCCGGACCCCAATAGCAAA+TGG | 0.450488 | 6_4:+54952214 | Msa0991230:CDS |
| AAATGGGGATTGGTGTTTGA+TGG | 0.451137 | 6_4:+54952231 | Msa0991230:CDS |
| TGTCAAGGTGCTTAATTCTC+AGG | 0.461057 | 6_4:-54952404 | None:intergenic |
| TAATCAGATAAAGGGTGAAT+GGG | 0.468901 | 6_4:+54952452 | Msa0991230:CDS |
| TTAATCAGATAAAGGGTGAA+TGG | 0.470889 | 6_4:+54952451 | Msa0991230:CDS |
| GACTTGTTGTGCTCTAGCTT+GGG | 0.471195 | 6_4:+54951891 | Msa0991230:CDS |
| GCCGGACCCCAATAGCAAAT+GGG | 0.475037 | 6_4:+54952215 | Msa0991230:CDS |
| CCCCAATAGCAAATGGGGAT+TGG | 0.484162 | 6_4:+54952221 | Msa0991230:CDS |
| GAATATGAAGCATGTATCTT+GGG | 0.491039 | 6_4:+54952363 | Msa0991230:CDS |
| CCAATCCCCATTTGCTATTG+GGG | 0.498282 | 6_4:-54952221 | None:intergenic |
| AAAGTTATTCGTGCAGTGAA+AGG | 0.515634 | 6_4:-54952318 | None:intergenic |
| AAGGGATCAGCTTCTCATGA+TGG | 0.522680 | 6_4:-54952479 | None:intergenic |
| GCTGTTAATGCTTATGGTAA+AGG | 0.529088 | 6_4:+54952255 | Msa0991230:CDS |
| TTCAATGGTAAACACATGAG+CGG | 0.529126 | 6_4:-54952670 | None:intergenic |
| GGAAGTCAAACTTAATCGGC+TGG | 0.529520 | 6_4:-54952131 | None:intergenic |
| AGCCATCATTGTAACTCCAC+AGG | 0.538419 | 6_4:+54952284 | Msa0991230:CDS |
| AGGGATCAGCTTCTCATGAT+GGG | 0.539111 | 6_4:-54952478 | None:intergenic |
| GAAGAACCACTGATCAATGA+AGG | 0.544996 | 6_4:+54952192 | Msa0991230:CDS |
| GCAATCTTTCCAGTAACAGC+AGG | 0.547622 | 6_4:-54952000 | None:intergenic |
| TTGAGCTGCACCATATCCCT+CGG | 0.547826 | 6_4:+54952544 | Msa0991230:CDS |
| ACCACTGATCAATGAAGGGC+CGG | 0.550872 | 6_4:+54952197 | Msa0991230:CDS |
| GATCTTCAAGAGGAGGGTCA+TGG | 0.556611 | 6_4:+54964570 | Msa0991230:CDS |
| TCAATGGTAAACACATGAGC+GGG | 0.563614 | 6_4:-54952669 | None:intergenic |
| ATATGGTGAATCATACAACT+TGG | 0.576778 | 6_4:+54951935 | Msa0991230:CDS |
| CAGAATCTCCATAGATGTCA+AGG | 0.582188 | 6_4:-54952419 | None:intergenic |
| CCCTCGGGATGAAAATCAGA+TGG | 0.585194 | 6_4:+54952560 | Msa0991230:CDS |
| TGAGTTTGATCTTCAAGAGG+AGG | 0.586038 | 6_4:+54964563 | Msa0991230:CDS |
| AACTTGGTTGATAACCCGAA+TGG | 0.587860 | 6_4:+54951951 | Msa0991230:CDS |
| TGAGCTGCACCATATCCCTC+GGG | 0.588262 | 6_4:+54952545 | Msa0991230:CDS |
| CGTCTTGCATAGTCACGGCA+AGG | 0.589801 | 6_4:-54952498 | None:intergenic |
| CTTGTTGACATACTTTACAA+AGG | 0.590122 | 6_4:+54952521 | Msa0991230:CDS |
| ATGTGAGTTTGATCTTCAAG+AGG | 0.591258 | 6_4:+54964560 | Msa0991230:CDS |
| TCTTGAAGATCAAACTCACA+TGG | 0.605591 | 6_4:-54964558 | None:intergenic |
| GTCTTGCATAGTCACGGCAA+GGG | 0.607964 | 6_4:-54952497 | None:intergenic |
| AAAGCTAAGAAAGCAATCAA+AGG | 0.608421 | 6_4:+54952063 | Msa0991230:CDS |
| TCCGGCCCTTCATTGATCAG+TGG | 0.609050 | 6_4:-54952198 | None:intergenic |
| GCCATCATTGTAACTCCACA+GGG | 0.613858 | 6_4:+54952285 | Msa0991230:CDS |
| GATACATGATCTCTTCATCA+GGG | 0.622494 | 6_4:-54952152 | None:intergenic |
| GACAAGCAAGATGCTCAGCA+AGG | 0.622935 | 6_4:-54952092 | None:intergenic |
| ATCGGCTGGTAATCATCAAG+AGG | 0.625813 | 6_4:-54952117 | None:intergenic |
| CCGGACCCCAATAGCAAATG+GGG | 0.631405 | 6_4:+54952216 | Msa0991230:CDS |
| AAGAACCACTGATCAATGAA+GGG | 0.636679 | 6_4:+54952193 | Msa0991230:CDS |
| GAGTTTGATCTTCAAGAGGA+GGG | 0.644093 | 6_4:+54964564 | Msa0991230:CDS |
| TGCCCGTAATCAAAGTGCAG+CGG | 0.655786 | 6_4:+54952637 | Msa0991230:CDS |
| GATTCACCATATAATGACGC+AGG | 0.659254 | 6_4:-54951924 | None:intergenic |
| CCCCTGTGGAGTTACAATGA+TGG | 0.660373 | 6_4:-54952286 | None:intergenic |
| ACAAGCGTCTTGCATAGTCA+CGG | 0.668228 | 6_4:-54952503 | None:intergenic |
| GCTGCTATTGAATTATCACA+AGG | 0.693449 | 6_4:+54964594 | Msa0991230:CDS |
| CTGCTATTGAATTATCACAA+GGG | 0.696629 | 6_4:+54964595 | Msa0991230:CDS |
| AAAGGAATGTGATGCCCCTG+TGG | 0.705823 | 6_4:-54952300 | None:intergenic |
| TTACTGGAAAGATTGCACGT+TGG | 0.751472 | 6_4:+54952007 | Msa0991230:CDS |
| CCATCATTGTAACTCCACAG+GGG | 0.807804 | 6_4:+54952286 | Msa0991230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGTTTTAATTTTCATTT+TGG | + | chr6_4:54957303-54957322 | Msa0991230:intron | 10.0% |
| !!! | TTTTATTTTATTTGAATTGA+AGG | - | chr6_4:54959873-54959892 | None:intergenic | 10.0% |
| !!! | TTGTTTTAATTTATTTTTCT+GGG | - | chr6_4:54961251-54961270 | None:intergenic | 10.0% |
| !!! | TTTGTTTTAATTTATTTTTC+TGG | - | chr6_4:54961252-54961271 | None:intergenic | 10.0% |
| !! | TAAAAACATAAAAATAATTG+GGG | - | chr6_4:54962141-54962160 | None:intergenic | 10.0% |
| !!! | AGCTTTTTAATAATTAATTT+CGG | + | chr6_4:54962712-54962731 | Msa0991230:intron | 10.0% |
| !! | AAAATATTTCTTGACTATAT+TGG | - | chr6_4:54954058-54954077 | None:intergenic | 15.0% |
| !! | ACAAGATTATTTAAATGTAT+GGG | - | chr6_4:54955356-54955375 | None:intergenic | 15.0% |
| !! | AACAAGATTATTTAAATGTA+TGG | - | chr6_4:54955357-54955376 | None:intergenic | 15.0% |
| !! | TAATATTGAAATAAAATGCA+AGG | - | chr6_4:54956835-54956854 | None:intergenic | 15.0% |
| !!! | CAATTTTTAGAATTTAAACA+GGG | - | chr6_4:54957067-54957086 | None:intergenic | 15.0% |
| !!! | ACAATTTTTAGAATTTAAAC+AGG | - | chr6_4:54957068-54957087 | None:intergenic | 15.0% |
| !!! | TAAAATGGTTTTTTTAACAA+GGG | - | chr6_4:54957134-54957153 | None:intergenic | 15.0% |
| !!! | TTAAAATGGTTTTTTTAACA+AGG | - | chr6_4:54957135-54957154 | None:intergenic | 15.0% |
| !! | AAAACTTGTAAAAATATATG+TGG | + | chr6_4:54958711-54958730 | Msa0991230:intron | 15.0% |
| !!! | TGATATTGTTCATATTTTTT+TGG | - | chr6_4:54959561-54959580 | None:intergenic | 15.0% |
| !!! | ATATTTTTCTAAATAAACCT+TGG | + | chr6_4:54959586-54959605 | Msa0991230:intron | 15.0% |
| !!! | TATTTTTCTAAATAAACCTT+GGG | + | chr6_4:54959587-54959606 | Msa0991230:intron | 15.0% |
| !!! | TTTTTGTTTAAGAAAAGAAA+AGG | - | chr6_4:54959634-54959653 | None:intergenic | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | - | chr6_4:54959766-54959785 | None:intergenic | 15.0% |
| !!! | CAAAAACAAAAAACATTTTT+TGG | + | chr6_4:54959790-54959809 | Msa0991230:intron | 15.0% |
| !! | AACTTATATGTATATAAAGA+TGG | + | chr6_4:54960844-54960863 | Msa0991230:intron | 15.0% |
| !! | ACTTATATGTATATAAAGAT+GGG | + | chr6_4:54960845-54960864 | Msa0991230:intron | 15.0% |
| !! | AAAATAATTAATAGGATCTA+TGG | - | chr6_4:54961059-54961078 | None:intergenic | 15.0% |
| !!! | ATTATTTTAATTTCAACAGT+TGG | + | chr6_4:54961071-54961090 | Msa0991230:intron | 15.0% |
| !!! | ATGAAAACATTTGTTTTTAA+AGG | - | chr6_4:54961374-54961393 | None:intergenic | 15.0% |
| !! | CAATCATAAAAATAAACATA+GGG | - | chr6_4:54962558-54962577 | None:intergenic | 15.0% |
| !!! | CTATGTTTATTTTTATGATT+GGG | + | chr6_4:54962557-54962576 | Msa0991230:intron | 15.0% |
| !!! | TCATTTGTTTTTTTTTCTTA+TGG | + | chr6_4:54963439-54963458 | Msa0991230:intron | 15.0% |
| !!! | TTTTTTTTTCTTATGGATTA+TGG | + | chr6_4:54963446-54963465 | Msa0991230:intron | 15.0% |
| !! | TTATCTAACTTATAATAGAT+AGG | + | chr6_4:54964083-54964102 | Msa0991230:intron | 15.0% |
| !!! | TGACTATTTTTGTTTTTATT+AGG | + | chr6_4:54964110-54964129 | Msa0991230:intron | 15.0% |
| !!! | AAAATGGTAATTTTATTGGT+TGG | - | chr6_4:54954453-54954472 | None:intergenic | 20.0% |
| !!! | TTGGAAAATGGTAATTTTAT+TGG | - | chr6_4:54954457-54954476 | None:intergenic | 20.0% |
| !! | ATTGACATTATCAAATAGAA+AGG | - | chr6_4:54954604-54954623 | None:intergenic | 20.0% |
| !! | AATTGAGATTGAATTGAAAT+TGG | - | chr6_4:54955443-54955462 | None:intergenic | 20.0% |
| !!! | AAATGATTTGAAATTGAGAT+TGG | - | chr6_4:54955576-54955595 | None:intergenic | 20.0% |
| !! | TTGAATTTGACAATTGAAAT+TGG | - | chr6_4:54955650-54955669 | None:intergenic | 20.0% |
| !! | ATTGAAATTGAAATTGTGAT+TGG | - | chr6_4:54955693-54955712 | None:intergenic | 20.0% |
| !!! | TTGAATTTGACATTTGAAAT+TGG | - | chr6_4:54955747-54955766 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | - | chr6_4:54956747-54956766 | None:intergenic | 20.0% |
| !!! | AGAATTGAGTTAGTATTTTT+AGG | - | chr6_4:54956760-54956779 | None:intergenic | 20.0% |
| !! | TATTATTTGCAAAATTCACA+TGG | + | chr6_4:54956850-54956869 | Msa0991230:intron | 20.0% |
| !!! | CTGAAAGAAATTTTAATCAT+AGG | - | chr6_4:54956895-54956914 | None:intergenic | 20.0% |
| !!! | TTCAAATGCAATTTTTGAAA+TGG | - | chr6_4:54956988-54957007 | None:intergenic | 20.0% |
| !! | GACTTTAACAAACTTAAAAA+TGG | - | chr6_4:54957359-54957378 | None:intergenic | 20.0% |
| !! | TTAAAATGTGTCATAATTCT+TGG | + | chr6_4:54958959-54958978 | Msa0991230:intron | 20.0% |
| !! | AAAGAAAAGGAAAATACAAT+GGG | - | chr6_4:54959621-54959640 | None:intergenic | 20.0% |
| !! | AAAAGAAAAGGAAAATACAA+TGG | - | chr6_4:54959622-54959641 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | - | chr6_4:54960110-54960129 | None:intergenic | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | + | chr6_4:54960110-54960129 | Msa0991230:intron | 20.0% |
| !!! | TATTGTTTTATCTTGGTTTT+CGG | - | chr6_4:54960170-54960189 | None:intergenic | 20.0% |
| !!! | CTTACAATATTGTTTTATCT+TGG | - | chr6_4:54960177-54960196 | None:intergenic | 20.0% |
| !! | AGATAAAACAATATTGTAAG+TGG | + | chr6_4:54960177-54960196 | Msa0991230:intron | 20.0% |
| !! | GAAATTATGAATGATAGATT+TGG | - | chr6_4:54960253-54960272 | None:intergenic | 20.0% |
| !! | ATTTCTCATTAATAACAAAG+CGG | + | chr6_4:54960268-54960287 | Msa0991230:intron | 20.0% |
| !!! | TAAAAAGATTTTGTTACACA+TGG | - | chr6_4:54960396-54960415 | None:intergenic | 20.0% |
| !!! | ATGTGTAACAAAATCTTTTT+AGG | + | chr6_4:54960395-54960414 | Msa0991230:intron | 20.0% |
| !! | ATATCCAACAAATATAATAG+AGG | - | chr6_4:54960439-54960458 | None:intergenic | 20.0% |
| !! | GCATGATAGTAAAATTAAAT+AGG | - | chr6_4:54960502-54960521 | None:intergenic | 20.0% |
| !! | GAAAGAAGAATGAAATTATT+GGG | - | chr6_4:54960678-54960697 | None:intergenic | 20.0% |
| !! | TGAAAGAAGAATGAAATTAT+TGG | - | chr6_4:54960679-54960698 | None:intergenic | 20.0% |
| !! | GAAAACTTGAAATTATTTGA+GGG | - | chr6_4:54960907-54960926 | None:intergenic | 20.0% |
| !! | TGAAAACTTGAAATTATTTG+AGG | - | chr6_4:54960908-54960927 | None:intergenic | 20.0% |
| !!! | AACGTACGTTTTATTAATTA+TGG | - | chr6_4:54960939-54960958 | None:intergenic | 20.0% |
| !!! | AATTAATAAAACGTACGTTT+TGG | + | chr6_4:54960940-54960959 | Msa0991230:intron | 20.0% |
| !! | TGAAGAAAAGGAAAAAAATT+AGG | - | chr6_4:54961169-54961188 | None:intergenic | 20.0% |
| !! | AAATATAGAAGATGAAGAAA+AGG | - | chr6_4:54961181-54961200 | None:intergenic | 20.0% |
| !! | ATACCACAACAAAAAAAAAA+AGG | + | chr6_4:54962181-54962200 | Msa0991230:intron | 20.0% |
| !! | AATTAAAGAAAACTAAACGT+GGG | - | chr6_4:54962224-54962243 | None:intergenic | 20.0% |
| !! | AAATTAAAGAAAACTAAACG+TGG | - | chr6_4:54962225-54962244 | None:intergenic | 20.0% |
| !! | CCAATCATAAAAATAAACAT+AGG | - | chr6_4:54962559-54962578 | None:intergenic | 20.0% |
| !!! | CCTATGTTTATTTTTATGAT+TGG | + | chr6_4:54962556-54962575 | Msa0991230:intron | 20.0% |
| !! | AAGAAGAAAAATGAAGTAAA+TGG | - | chr6_4:54962646-54962665 | None:intergenic | 20.0% |
| !!! | ATCATTGTTTAGAGTAATAT+TGG | + | chr6_4:54962871-54962890 | Msa0991230:intron | 20.0% |
| !! | TTCACAATAAATGTCAAATT+CGG | + | chr6_4:54962960-54962979 | Msa0991230:intron | 20.0% |
| !!! | GTTATTTTGTTGTGAAAATA+AGG | + | chr6_4:54963011-54963030 | Msa0991230:intron | 20.0% |
| !! | AACCTAACAAATATATATCA+AGG | - | chr6_4:54963057-54963076 | None:intergenic | 20.0% |
| !!! | ATATATATTTGTTAGGTTCA+AGG | + | chr6_4:54963059-54963078 | Msa0991230:intron | 20.0% |
| !!! | TTGAGTACTTTAAGATTAAT+AGG | + | chr6_4:54963137-54963156 | Msa0991230:intron | 20.0% |
| !!! | TGAGTACTTTAAGATTAATA+GGG | + | chr6_4:54963138-54963157 | Msa0991230:intron | 20.0% |
| !! | TTAATAGGGAGTTATATTAA+TGG | + | chr6_4:54963152-54963171 | Msa0991230:intron | 20.0% |
| !!! | ACTTTCTACTTCTATTTTAA+AGG | + | chr6_4:54963228-54963247 | Msa0991230:intron | 20.0% |
| !!! | TACATTTTATGTTCATGATT+TGG | + | chr6_4:54963676-54963695 | Msa0991230:intron | 20.0% |
| !!! | TTTTGTATATGATTAAGACT+TGG | + | chr6_4:54963748-54963767 | Msa0991230:intron | 20.0% |
| !! | AGTTTAGACTAACATTATTA+AGG | + | chr6_4:54963809-54963828 | Msa0991230:intron | 20.0% |
| !!! | CATTATTAAGGTTGATAAAT+TGG | + | chr6_4:54963821-54963840 | Msa0991230:intron | 20.0% |
| !!! | ATATACTATGATTTTCAGAT+TGG | + | chr6_4:54964004-54964023 | Msa0991230:intron | 20.0% |
| !! | ATAATTCCAATTCTTCAATA+TGG | + | chr6_4:54964245-54964264 | Msa0991230:intron | 20.0% |
| !! | ATGTACAGTATAAATAACTT+TGG | + | chr6_4:54964499-54964518 | Msa0991230:intron | 20.0% |
| !! | TTTTCAAAGATGTACTTGAT+TGG | - | chr6_4:54951979-54951998 | None:intergenic | 25.0% |
| ! | ACTTGTCATTAATCAGATAA+AGG | + | chr6_4:54952443-54952462 | Msa0991230:CDS | 25.0% |
| ! | CTTGTCATTAATCAGATAAA+GGG | + | chr6_4:54952444-54952463 | Msa0991230:CDS | 25.0% |
| ! | AAAAGACAAGTAACTATATC+TGG | + | chr6_4:54954307-54954326 | Msa0991230:intron | 25.0% |
| ! | AAAATAGAGTTTCAAACAAG+TGG | - | chr6_4:54954547-54954566 | None:intergenic | 25.0% |
| ! | ATTGAATTGAAATTGGAAGT+AGG | - | chr6_4:54955436-54955455 | None:intergenic | 25.0% |
| ! | ATTGAATTGAATTTGACAGT+TGG | - | chr6_4:54955520-54955539 | None:intergenic | 25.0% |
| ! | AATTGTGATTGGATTGAAAT+TGG | - | chr6_4:54955682-54955701 | None:intergenic | 25.0% |
| ! | ATTTAACAAGATACCAATTG+GGG | - | chr6_4:54955977-54955996 | None:intergenic | 25.0% |
| ! | GATTTAACAAGATACCAATT+GGG | - | chr6_4:54955978-54955997 | None:intergenic | 25.0% |
| ! | TGATTTAACAAGATACCAAT+TGG | - | chr6_4:54955979-54955998 | None:intergenic | 25.0% |
| ! | GATTGAAAATACAAACAGAT+AGG | - | chr6_4:54956303-54956322 | None:intergenic | 25.0% |
| !!! | TTCATAATCAAAGTATTGCA+TGG | + | chr6_4:54956574-54956593 | Msa0991230:intron | 25.0% |
| !! | ATTAACATTTGCATTGCTTT+TGG | - | chr6_4:54956639-54956658 | None:intergenic | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | - | chr6_4:54956748-54956767 | None:intergenic | 25.0% |
| ! | ACTTACTCAAACTATTTGAA+AGG | - | chr6_4:54956940-54956959 | None:intergenic | 25.0% |
| !!! | AAATGGATTTTGACATAGAA+TGG | - | chr6_4:54956971-54956990 | None:intergenic | 25.0% |
| !!! | ACTTCGATGCAATTTTAAAA+TGG | - | chr6_4:54957149-54957168 | None:intergenic | 25.0% |
| !! | ATGCAAATAACAAAAGTACA+AGG | - | chr6_4:54957330-54957349 | None:intergenic | 25.0% |
| !! | TTGTGATTTTTGTGTATTTG+TGG | - | chr6_4:54957517-54957536 | None:intergenic | 25.0% |
| !!! | TTTTGCGAAAATTTTGATGA+AGG | - | chr6_4:54957881-54957900 | None:intergenic | 25.0% |
| ! | AAAAGTGAAGAAAAAAACTC+CGG | + | chr6_4:54958286-54958305 | Msa0991230:intron | 25.0% |
| !!! | TTCTGTTTGCAATGTTTTTT+CGG | + | chr6_4:54958403-54958422 | Msa0991230:intron | 25.0% |
| !!! | GTTCTTTCTTGATAATTTTG+TGG | + | chr6_4:54958663-54958682 | Msa0991230:intron | 25.0% |
| ! | ATGATCTTGATTCTAATTCT+TGG | + | chr6_4:54958787-54958806 | Msa0991230:intron | 25.0% |
| ! | TCCACAAACAATTATTTACA+TGG | - | chr6_4:54958920-54958939 | None:intergenic | 25.0% |
| ! | ACAAAATTCACACAAACATA+AGG | - | chr6_4:54959063-54959082 | None:intergenic | 25.0% |
| !! | TGAATTTTGTGACAAAGTTT+GGG | + | chr6_4:54959073-54959092 | Msa0991230:intron | 25.0% |
| ! | GAATGAAACATGAAACAAAA+TGG | - | chr6_4:54959214-54959233 | None:intergenic | 25.0% |
| ! | GTCTTTGCATGAAATTTAAA+TGG | - | chr6_4:54959286-54959305 | None:intergenic | 25.0% |
| ! | ACTTAGCATGTAAAAATCTA+GGG | + | chr6_4:54959304-54959323 | Msa0991230:intron | 25.0% |
| ! | GTATGTTTAGATGAATGTTT+AGG | + | chr6_4:54959510-54959529 | Msa0991230:intron | 25.0% |
| ! | GAATATTCTAAGTGAAGAAT+GGG | - | chr6_4:54959918-54959937 | None:intergenic | 25.0% |
| ! | AGAATATTCTAAGTGAAGAA+TGG | - | chr6_4:54959919-54959938 | None:intergenic | 25.0% |
| ! | TCTTCACTTAGAATATTCTT+AGG | + | chr6_4:54959920-54959939 | Msa0991230:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | - | chr6_4:54960105-54960124 | None:intergenic | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | - | chr6_4:54960106-54960125 | None:intergenic | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | - | chr6_4:54960111-54960130 | None:intergenic | 25.0% |
| !!! | ATTGTTTTATCTTGGTTTTC+GGG | - | chr6_4:54960169-54960188 | None:intergenic | 25.0% |
| !! | GTTTTTGATCTTAACTTCAA+GGG | + | chr6_4:54960208-54960227 | Msa0991230:intron | 25.0% |
| !! | TTTTTGATCTTAACTTCAAG+GGG | + | chr6_4:54960209-54960228 | Msa0991230:intron | 25.0% |
| !!! | TAACAAAATCTTTTTAGGCT+AGG | + | chr6_4:54960400-54960419 | Msa0991230:intron | 25.0% |
| !!! | AACAAAATCTTTTTAGGCTA+GGG | + | chr6_4:54960401-54960420 | Msa0991230:intron | 25.0% |
| ! | TGAACCTCTATTATATTTGT+TGG | + | chr6_4:54960432-54960451 | Msa0991230:intron | 25.0% |
| ! | ATTTCATTCTTCTTTCATCT+TGG | + | chr6_4:54960682-54960701 | Msa0991230:intron | 25.0% |
| ! | TACTCTAAATACAAGACTAA+AGG | - | chr6_4:54960796-54960815 | None:intergenic | 25.0% |
| ! | ATAATTAATAGGATCTATGG+TGG | - | chr6_4:54961056-54961075 | None:intergenic | 25.0% |
| !!! | TTTTAAAAAAAGAGAACCAC+TGG | + | chr6_4:54961103-54961122 | Msa0991230:intron | 25.0% |
| ! | AAAGGAAAAAAATTAGGTGT+TGG | - | chr6_4:54961163-54961182 | None:intergenic | 25.0% |
| !! | GATGATGATTTTCTTTTTTC+TGG | - | chr6_4:54961280-54961299 | None:intergenic | 25.0% |
| ! | TATTCGTGTATGTTGTAATT+TGG | - | chr6_4:54961519-54961538 | None:intergenic | 25.0% |
| !! | ATTTTCCAAACGAAAAACTT+CGG | - | chr6_4:54961607-54961626 | None:intergenic | 25.0% |
| ! | AGCATAAATAGAGTAAACAA+CGG | - | chr6_4:54961657-54961676 | None:intergenic | 25.0% |
| ! | TTCATTTGTGTTAGATTTAG+TGG | - | chr6_4:54961988-54962007 | None:intergenic | 25.0% |
| ! | CATAAAAATAATTGGGGAAT+GGG | - | chr6_4:54962135-54962154 | None:intergenic | 25.0% |
| ! | ACATAAAAATAATTGGGGAA+TGG | - | chr6_4:54962136-54962155 | None:intergenic | 25.0% |
| !! | TCACAAAAATGGTATTTTCT+TGG | - | chr6_4:54962376-54962395 | None:intergenic | 25.0% |
| ! | AAATTCAAACATCTTAGATC+TGG | - | chr6_4:54962438-54962457 | None:intergenic | 25.0% |
| ! | GAAAACAAGATTAAATGTGA+TGG | - | chr6_4:54962466-54962485 | None:intergenic | 25.0% |
| !!! | TCACATTTAATCTTGTTTTC+CGG | + | chr6_4:54962466-54962485 | Msa0991230:intron | 25.0% |
| !!! | TGGATTAATTTTTCAAATGG+AGG | - | chr6_4:54962501-54962520 | None:intergenic | 25.0% |
| !!! | GGTTGGATTAATTTTTCAAA+TGG | - | chr6_4:54962504-54962523 | None:intergenic | 25.0% |
| !!! | TACTTCATTTTTCTTCTTCT+AGG | + | chr6_4:54962648-54962667 | Msa0991230:intron | 25.0% |
| ! | AAATAACATGTCTAATTGAG+TGG | - | chr6_4:54962751-54962770 | None:intergenic | 25.0% |
| !! | TGATTTTAAGCTTCCTAATA+TGG | + | chr6_4:54962783-54962802 | Msa0991230:intron | 25.0% |
| !!! | ATTTGGTTTTGTTATATCCT+TGG | + | chr6_4:54962846-54962865 | Msa0991230:intron | 25.0% |
| !!! | ATTTTGTTGTGAAAATAAGG+AGG | + | chr6_4:54963014-54963033 | Msa0991230:intron | 25.0% |
| ! | TTACTTCGAGTAGAATTAAA+AGG | + | chr6_4:54963084-54963103 | Msa0991230:intron | 25.0% |
| !!! | TCTAGGCTTATAATTTGTTT+TGG | + | chr6_4:54963107-54963126 | Msa0991230:intron | 25.0% |
| !!! | TAATGGATTTTAGTCATGAA+AGG | + | chr6_4:54963169-54963188 | Msa0991230:intron | 25.0% |
| ! | CAATAACAAGTAACATTACT+AGG | - | chr6_4:54963494-54963513 | None:intergenic | 25.0% |
| !!! | CTAGTAATGTTACTTGTTAT+TGG | + | chr6_4:54963492-54963511 | Msa0991230:intron | 25.0% |
| !!! | TGTTATTGGAGATTTTAAGT+TGG | + | chr6_4:54963506-54963525 | Msa0991230:intron | 25.0% |
| ! | AAGAGAAAAGTCATTATCAT+TGG | - | chr6_4:54963622-54963641 | None:intergenic | 25.0% |
| !!! | ATATCAATGATAGCTTGTTT+TGG | + | chr6_4:54963773-54963792 | Msa0991230:intron | 25.0% |
| ! | TCATAGTATATAAACCATCA+TGG | - | chr6_4:54963995-54964014 | None:intergenic | 25.0% |
| !! | GTTTATGTTGTCCAATTTTA+AGG | + | chr6_4:54964212-54964231 | Msa0991230:intron | 25.0% |
| ! | GAATTGGAATTATCAAGATA+TGG | - | chr6_4:54964238-54964257 | None:intergenic | 25.0% |
| !!! | ATTATGTTCTTTAAGACGTA+AGG | + | chr6_4:54964314-54964333 | Msa0991230:intron | 25.0% |
| ! | AAACATTCAAAACTAACACA+CGG | - | chr6_4:54964361-54964380 | None:intergenic | 25.0% |
| !!! | TGTTGACAATAGATTTTGAT+AGG | + | chr6_4:54964464-54964483 | Msa0991230:intron | 25.0% |
| !!! | GTTGACAATAGATTTTGATA+GGG | + | chr6_4:54964465-54964484 | Msa0991230:intron | 25.0% |
| ATATGGTGAATCATACAACT+TGG | + | chr6_4:54951935-54951954 | Msa0991230:CDS | 30.0% | |
| AAAGCTAAGAAAGCAATCAA+AGG | + | chr6_4:54952063-54952082 | Msa0991230:CDS | 30.0% | |
| AATGCTTATGGTAAAGGAAT+TGG | + | chr6_4:54952261-54952280 | Msa0991230:CDS | 30.0% | |
| TGAATATGAAGCATGTATCT+TGG | + | chr6_4:54952362-54952381 | Msa0991230:CDS | 30.0% | |
| GAATATGAAGCATGTATCTT+GGG | + | chr6_4:54952363-54952382 | Msa0991230:CDS | 30.0% | |
| TTAATCAGATAAAGGGTGAA+TGG | + | chr6_4:54952451-54952470 | Msa0991230:CDS | 30.0% | |
| TAATCAGATAAAGGGTGAAT+GGG | + | chr6_4:54952452-54952471 | Msa0991230:CDS | 30.0% | |
| CTTGTTGACATACTTTACAA+AGG | + | chr6_4:54952521-54952540 | Msa0991230:CDS | 30.0% | |
| ! | TTGATCTGGCATATTTTCAA+TGG | - | chr6_4:54952688-54952707 | None:intergenic | 30.0% |
| TGTTTGATGTTGTAATACCA+AGG | - | chr6_4:54952738-54952757 | None:intergenic | 30.0% | |
| AATTGACTATTTCACCAAGT+GGG | + | chr6_4:54953202-54953221 | Msa0991230:intron | 30.0% | |
| AATAACATCATCTGTCGATA+TGG | + | chr6_4:54953281-54953300 | Msa0991230:intron | 30.0% | |
| ATACCATATACCAAAGAGAA+AGG | - | chr6_4:54953664-54953683 | None:intergenic | 30.0% | |
| TTTCTCTTTGGTATATGGTA+TGG | + | chr6_4:54953663-54953682 | Msa0991230:intron | 30.0% | |
| TATTGGCATTAACAGGATTT+GGG | - | chr6_4:54954041-54954060 | None:intergenic | 30.0% | |
| ATATTGGCATTAACAGGATT+TGG | - | chr6_4:54954042-54954061 | None:intergenic | 30.0% | |
| TTGACTATATTGGCATTAAC+AGG | - | chr6_4:54954048-54954067 | None:intergenic | 30.0% | |
| AAAGTTTCTGTGAAATGTAG+CGG | + | chr6_4:54954407-54954426 | Msa0991230:intron | 30.0% | |
| GATTTACAAAGCTTGGAAAA+TGG | - | chr6_4:54954469-54954488 | None:intergenic | 30.0% | |
| TTTCAATACATGTTACAAGC+AGG | + | chr6_4:54954744-54954763 | Msa0991230:intron | 30.0% | |
| ATGAAAAGAATCTTATTCCC+CGG | + | chr6_4:54954939-54954958 | Msa0991230:intron | 30.0% | |
| GAAATAAGACTTGTAAAGGA+GGG | - | chr6_4:54955141-54955160 | None:intergenic | 30.0% | |
| !! | TGCATGATTGGTTTGTAATT+TGG | - | chr6_4:54955293-54955312 | None:intergenic | 30.0% |
| AGAGTTTGACAGTTGAAATT+TGG | - | chr6_4:54955404-54955423 | None:intergenic | 30.0% | |
| ATTGGATTGAAGGTTGAAAT+TGG | - | chr6_4:54955729-54955748 | None:intergenic | 30.0% | |
| ! | GACATTTGAAATTGGATTGA+AGG | - | chr6_4:54955739-54955758 | None:intergenic | 30.0% |
| GTTGAAATTGACATTGAGAT+TGG | - | chr6_4:54955789-54955808 | None:intergenic | 30.0% | |
| TTGATTAGAGACATAGACAT+TGG | - | chr6_4:54955820-54955839 | None:intergenic | 30.0% | |
| !! | ATTCACTCTCAATTTGCTTT+TGG | + | chr6_4:54955900-54955919 | Msa0991230:intron | 30.0% |
| !! | TTCACTCTCAATTTGCTTTT+GGG | + | chr6_4:54955901-54955920 | Msa0991230:intron | 30.0% |
| !! | ATAGACATGACCATTTTTGT+TGG | - | chr6_4:54955927-54955946 | None:intergenic | 30.0% |
| TTTAACAAGATACCAATTGG+GGG | - | chr6_4:54955976-54955995 | None:intergenic | 30.0% | |
| ! | CTTCCAACATATCTTGTTAT+CGG | + | chr6_4:54956001-54956020 | Msa0991230:intron | 30.0% |
| GAAAATACAAACAGATAGGT+AGG | - | chr6_4:54956299-54956318 | None:intergenic | 30.0% | |
| TGCCTATATATCTATGTTTC+CGG | + | chr6_4:54956358-54956377 | Msa0991230:intron | 30.0% | |
| !!! | ATCTCTTGTTTTGTATTCCT+TGG | + | chr6_4:54956419-54956438 | Msa0991230:intron | 30.0% |
| ! | CCTATTTAAGTTTCTTTGTC+CGG | - | chr6_4:54956711-54956730 | None:intergenic | 30.0% |
| CGGACAAAGAAACTTAAATA+GGG | + | chr6_4:54956709-54956728 | Msa0991230:intron | 30.0% | |
| GGACAAAGAAACTTAAATAG+GGG | + | chr6_4:54956710-54956729 | Msa0991230:intron | 30.0% | |
| ATTTGCAAAATTCACATGGA+AGG | + | chr6_4:54956854-54956873 | Msa0991230:intron | 30.0% | |
| TTTGCAAAATTCACATGGAA+GGG | + | chr6_4:54956855-54956874 | Msa0991230:intron | 30.0% | |
| ! | GTTTGTTAAAGTCAAAGTCA+AGG | + | chr6_4:54957366-54957385 | Msa0991230:intron | 30.0% |
| GACTTATTTATAGGTGATGT+GGG | - | chr6_4:54957442-54957461 | None:intergenic | 30.0% | |
| TGACTTATTTATAGGTGATG+TGG | - | chr6_4:54957443-54957462 | None:intergenic | 30.0% | |
| CATCACCTATAAATAAGTCA+AGG | + | chr6_4:54957443-54957462 | Msa0991230:intron | 30.0% | |
| CATGACCTTGACTTATTTAT+AGG | - | chr6_4:54957451-54957470 | None:intergenic | 30.0% | |
| CTATAAATAAGTCAAGGTCA+TGG | + | chr6_4:54957449-54957468 | Msa0991230:intron | 30.0% | |
| !! | AAAGTGGTTAGAGTTTGTTA+GGG | - | chr6_4:54957605-54957624 | None:intergenic | 30.0% |
| !!! | TCAAGGTTGTGAAGTTTTTT+GGG | - | chr6_4:54957687-54957706 | None:intergenic | 30.0% |
| !!! | TTCAAGGTTGTGAAGTTTTT+TGG | - | chr6_4:54957688-54957707 | None:intergenic | 30.0% |
| !! | AGTGATAGTGAATTTTCTTG+AGG | - | chr6_4:54957745-54957764 | None:intergenic | 30.0% |
| !! | ATGTTATAATGAGTGGGTTA+TGG | - | chr6_4:54958467-54958486 | None:intergenic | 30.0% |
| TGGGTTATGTTATAATGAGT+GGG | - | chr6_4:54958473-54958492 | None:intergenic | 30.0% | |
| ! | ATGGGTTATGTTATAATGAG+TGG | - | chr6_4:54958474-54958493 | None:intergenic | 30.0% |
| CTAAGAGCAAAAACGAAAAT+GGG | - | chr6_4:54958519-54958538 | None:intergenic | 30.0% | |
| ! | GAAAGAACTATGAGTTTTTG+TGG | - | chr6_4:54958651-54958670 | None:intergenic | 30.0% |
| TACTGAATGTTAATGTGTTG+TGG | + | chr6_4:54958874-54958893 | Msa0991230:intron | 30.0% | |
| GCCATGTAAATAATTGTTTG+TGG | + | chr6_4:54958916-54958935 | Msa0991230:intron | 30.0% | |
| ! | AAACTCTTTGAAGATTGTCA+TGG | + | chr6_4:54959022-54959041 | Msa0991230:intron | 30.0% |
| TGTCATGGCATGAAAATTAT+AGG | + | chr6_4:54959037-54959056 | Msa0991230:intron | 30.0% | |
| ! | GTGAATTTTGTGACAAAGTT+TGG | + | chr6_4:54959072-54959091 | Msa0991230:intron | 30.0% |
| AAAATCTTAGCACACAAAAG+TGG | - | chr6_4:54959108-54959127 | None:intergenic | 30.0% | |
| AGATGCAAGTAAAATAGCAT+AGG | - | chr6_4:54959159-54959178 | None:intergenic | 30.0% | |
| ACATGAAACAAAATGGTTAG+TGG | - | chr6_4:54959207-54959226 | None:intergenic | 30.0% | |
| TGCATGAAATTTAAATGGCA+AGG | - | chr6_4:54959281-54959300 | None:intergenic | 30.0% | |
| GACTTAGCATGTAAAAATCT+AGG | + | chr6_4:54959303-54959322 | Msa0991230:intron | 30.0% | |
| AAGTGATGTAATAAGGACAA+TGG | + | chr6_4:54959389-54959408 | Msa0991230:intron | 30.0% | |
| ! | ATATGCACACACATCATTTT+AGG | + | chr6_4:54959445-54959464 | Msa0991230:intron | 30.0% |
| GCATGTTTAGATGTATGTTT+AGG | + | chr6_4:54959484-54959503 | Msa0991230:intron | 30.0% | |
| GGAATTAGTCATTTGCAAAA+AGG | - | chr6_4:54959684-54959703 | None:intergenic | 30.0% | |
| ATGAGATTATGAAAAGAGTG+AGG | - | chr6_4:54959708-54959727 | None:intergenic | 30.0% | |
| !!! | CATTTTTTGGAAGAGAACTA+CGG | + | chr6_4:54959803-54959822 | Msa0991230:intron | 30.0% |
| AAATTAAAGACGGTTCCTAT+AGG | + | chr6_4:54959992-54960011 | Msa0991230:intron | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | - | chr6_4:54960010-54960029 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | + | chr6_4:54960010-54960029 | Msa0991230:intron | 30.0% | |
| TAGGATACTATAGTCGTTAT+GGG | + | chr6_4:54960011-54960030 | Msa0991230:intron | 30.0% | |
| !! | TAAGATATCACCGGTTTAAA+AGG | + | chr6_4:54960119-54960138 | Msa0991230:intron | 30.0% |
| ! | TACGTTTGAACCTTTTAAAC+CGG | - | chr6_4:54960132-54960151 | None:intergenic | 30.0% |
| AATATTGTAAGTGGAAAGCT+TGG | + | chr6_4:54960186-54960205 | Msa0991230:intron | 30.0% | |
| ! | GGTTTTTGATCTTAACTTCA+AGG | + | chr6_4:54960207-54960226 | Msa0991230:intron | 30.0% |
| ! | TTTTGATCTTAACTTCAAGG+GGG | + | chr6_4:54960210-54960229 | Msa0991230:intron | 30.0% |
| CAATGTGACATACCTAATAT+TGG | + | chr6_4:54960570-54960589 | Msa0991230:intron | 30.0% | |
| ATTCTTCTTTCATCTTGGTA+AGG | + | chr6_4:54960687-54960706 | Msa0991230:intron | 30.0% | |
| !! | CTTCTAAGATTCAATATACG+AGG | + | chr6_4:54960767-54960786 | Msa0991230:intron | 30.0% |
| ! | ATGGGTTGAGCATAATATAT+CGG | + | chr6_4:54960863-54960882 | Msa0991230:intron | 30.0% |
| !! | AGCATAATATATCGGCTTAT+TGG | + | chr6_4:54960871-54960890 | Msa0991230:intron | 30.0% |
| ACTTAACGTAGGGATTTATT+TGG | - | chr6_4:54960989-54961008 | None:intergenic | 30.0% | |
| !!! | TGGACTTTTTTTAGAGAGAA+AGG | - | chr6_4:54961320-54961339 | None:intergenic | 30.0% |
| TGTTGTTCTATTGATGCAAA+GGG | - | chr6_4:54961408-54961427 | None:intergenic | 30.0% | |
| ATGTTGTTCTATTGATGCAA+AGG | - | chr6_4:54961409-54961428 | None:intergenic | 30.0% | |
| ! | TTTTTCGTTTGGAAAATCTC+AGG | + | chr6_4:54961610-54961629 | Msa0991230:intron | 30.0% |
| !!! | GTGCCTTTTTTTTTTTGTTG+TGG | - | chr6_4:54962187-54962206 | None:intergenic | 30.0% |
| GATCTGGACAATAAATTAGT+GGG | - | chr6_4:54962422-54962441 | None:intergenic | 30.0% | |
| AGATCTGGACAATAAATTAG+TGG | - | chr6_4:54962423-54962442 | None:intergenic | 30.0% | |
| ! | TTTTTGTTGAAAACCTCATG+GGG | - | chr6_4:54962535-54962554 | None:intergenic | 30.0% |
| ! | GTTTTTGTTGAAAACCTCAT+GGG | - | chr6_4:54962536-54962555 | None:intergenic | 30.0% |
| ! | AGTTCCATTTTCTTTCTCTT+CGG | + | chr6_4:54962673-54962692 | Msa0991230:intron | 30.0% |
| TTTACCGAAGAGAAAGAAAA+TGG | - | chr6_4:54962680-54962699 | None:intergenic | 30.0% | |
| TAAGTCTAACATATACCCTT+GGG | - | chr6_4:54962809-54962828 | None:intergenic | 30.0% | |
| !! | GTTGTTGTTTGAGTCTTATT+TGG | + | chr6_4:54962829-54962848 | Msa0991230:intron | 30.0% |
| ACTCTAAACAATGATTTCCA+AGG | - | chr6_4:54962866-54962885 | None:intergenic | 30.0% | |
| GGCCTTGATATATATTTGTT+AGG | + | chr6_4:54963052-54963071 | Msa0991230:intron | 30.0% | |
| !!! | AGGCTTATAATTTGTTTTGG+TGG | + | chr6_4:54963110-54963129 | Msa0991230:intron | 30.0% |
| ATTCACTCAAATTTCTGTGA+AGG | + | chr6_4:54963279-54963298 | Msa0991230:intron | 30.0% | |
| ! | AAATGAGTTGAGAGAGAAAA+GGG | - | chr6_4:54963425-54963444 | None:intergenic | 30.0% |
| ! | CTTGGCATTTTATCTTGAAT+TGG | + | chr6_4:54963647-54963666 | Msa0991230:intron | 30.0% |
| AAACCATTACTCGTATTTAG+TGG | - | chr6_4:54963711-54963730 | None:intergenic | 30.0% | |
| ! | GAGTAATGGTTTCTTTTGAT+TGG | + | chr6_4:54963719-54963738 | Msa0991230:intron | 30.0% |
| ! | ATCATCTTGATCTCTTTTCA+TGG | - | chr6_4:54963880-54963899 | None:intergenic | 30.0% |
| TTCAGATTACTCTCAAAGAA+TGG | + | chr6_4:54963968-54963987 | Msa0991230:intron | 30.0% | |
| TTATGCTTTCAACTCTTTAC+CGG | + | chr6_4:54964152-54964171 | Msa0991230:intron | 30.0% | |
| ! | TCAAGATATGGCCTTAAAAT+TGG | - | chr6_4:54964226-54964245 | None:intergenic | 30.0% |
| AATGTTTGTGATTCCTACTA+TGG | + | chr6_4:54964374-54964393 | Msa0991230:intron | 30.0% | |
| ! | TCCTACTATGGATTATCATA+TGG | + | chr6_4:54964386-54964405 | Msa0991230:intron | 30.0% |
| TCCATATGATAATCCATAGT+AGG | - | chr6_4:54964390-54964409 | None:intergenic | 30.0% | |
| !! | ATAACAAGAAGCATCATTGT+AGG | - | chr6_4:54964437-54964456 | None:intergenic | 30.0% |
| CTGCTATTGAATTATCACAA+GGG | + | chr6_4:54964595-54964614 | Msa0991230:CDS | 30.0% | |
| TGTACTTGATTGGATCCATT+CGG | - | chr6_4:54951969-54951988 | None:intergenic | 35.0% | |
| TCAGGGAAGTCAAACTTAAT+CGG | - | chr6_4:54952138-54952157 | None:intergenic | 35.0% | |
| GATACATGATCTCTTCATCA+GGG | - | chr6_4:54952155-54952174 | None:intergenic | 35.0% | |
| AGATACATGATCTCTTCATC+AGG | - | chr6_4:54952156-54952175 | None:intergenic | 35.0% | |
| AAGAACCACTGATCAATGAA+GGG | + | chr6_4:54952193-54952212 | Msa0991230:CDS | 35.0% | |
| GCTGTTAATGCTTATGGTAA+AGG | + | chr6_4:54952255-54952274 | Msa0991230:CDS | 35.0% | |
| AAAGTTATTCGTGCAGTGAA+AGG | - | chr6_4:54952321-54952340 | None:intergenic | 35.0% | |
| ATTAAGCACCTTGACATCTA+TGG | + | chr6_4:54952411-54952430 | Msa0991230:CDS | 35.0% | |
| TTCAATGGTAAACACATGAG+CGG | - | chr6_4:54952673-54952692 | None:intergenic | 35.0% | |
| ACGTGAATGATAAAAAGCCT+TGG | + | chr6_4:54952718-54952737 | Msa0991230:CDS | 35.0% | |
| ! | CAAGGTCTTTTTATCTCTGT+TGG | - | chr6_4:54952796-54952815 | None:intergenic | 35.0% |
| ATAAAAAGACCTTGAGACGA+TGG | + | chr6_4:54952802-54952821 | Msa0991230:intron | 35.0% | |
| TAAAAAGACCTTGAGACGAT+GGG | + | chr6_4:54952803-54952822 | Msa0991230:intron | 35.0% | |
| TTGATGCATGATGTACATGA+CGG | + | chr6_4:54952918-54952937 | Msa0991230:intron | 35.0% | |
| TCAAGAAAACTGTTAAGAGC+CGG | + | chr6_4:54952975-54952994 | Msa0991230:intron | 35.0% | |
| CATAGTTATCCAGTAATAGC+CGG | - | chr6_4:54952997-54953016 | None:intergenic | 35.0% | |
| CAGCATAAATTTGACACTTG+TGG | - | chr6_4:54953052-54953071 | None:intergenic | 35.0% | |
| TCAATGTTATATCTTCCCCA+TGG | + | chr6_4:54953099-54953118 | Msa0991230:intron | 35.0% | |
| ATTGAACCAAAAGCTTCCAA+TGG | + | chr6_4:54953158-54953177 | Msa0991230:intron | 35.0% | |
| TGAAATAGTCAATTGCCACT+AGG | - | chr6_4:54953196-54953215 | None:intergenic | 35.0% | |
| CAATTGACTATTTCACCAAG+TGG | + | chr6_4:54953201-54953220 | Msa0991230:intron | 35.0% | |
| TTGTCAGTGATGATCTTGTT+GGG | - | chr6_4:54953311-54953330 | None:intergenic | 35.0% | |
| ATTGTCAGTGATGATCTTGT+TGG | - | chr6_4:54953312-54953331 | None:intergenic | 35.0% | |
| AACAAGATCATCACTGACAA+TGG | + | chr6_4:54953311-54953330 | Msa0991230:intron | 35.0% | |
| CATCATGCTATTGTTCAGAT+TGG | - | chr6_4:54953339-54953358 | None:intergenic | 35.0% | |
| CTTCTTGATGTTCTTGTTAG+CGG | - | chr6_4:54953539-54953558 | None:intergenic | 35.0% | |
| CAAGAAGATTGTTCAGAAGA+TGG | + | chr6_4:54953552-54953571 | Msa0991230:intron | 35.0% | |
| ACTCCTTTCTCTTTGGTATA+TGG | + | chr6_4:54953658-54953677 | Msa0991230:intron | 35.0% | |
| TCTGATTGAAGAGAAACGTA+TGG | + | chr6_4:54953789-54953808 | Msa0991230:intron | 35.0% | |
| AGAGAAACGTATGGATGTTA+TGG | + | chr6_4:54953798-54953817 | Msa0991230:intron | 35.0% | |
| GCGAACTTGTATTGAAAAGA+AGG | + | chr6_4:54953896-54953915 | Msa0991230:intron | 35.0% | |
| ACATAAGGACCTTCATAGTT+AGG | - | chr6_4:54953958-54953977 | None:intergenic | 35.0% | |
| AAAGCCTTCTTGACAACATA+AGG | - | chr6_4:54953973-54953992 | None:intergenic | 35.0% | |
| TTGATTCTTACACACATGGA+TGG | + | chr6_4:54954006-54954025 | Msa0991230:intron | 35.0% | |
| CTAAAAAGAAAAGAACAGCG+TGG | + | chr6_4:54954080-54954099 | Msa0991230:intron | 35.0% | |
| ! | TTTTGTCCCTAACTTTTGCT+TGG | - | chr6_4:54954179-54954198 | None:intergenic | 35.0% |
| TGGTGATACATTGAACACAA+TGG | - | chr6_4:54954433-54954452 | None:intergenic | 35.0% | |
| GAAGAGTGAAAATTAGCCAA+AGG | - | chr6_4:54954504-54954523 | None:intergenic | 35.0% | |
| TGAAATGTACCTTATTGCTC+AGG | - | chr6_4:54954688-54954707 | None:intergenic | 35.0% | |
| AAGGCAATTCAGGCAAAAAT+GGG | + | chr6_4:54954913-54954932 | Msa0991230:intron | 35.0% | |
| GGAAATAAGACTTGTAAAGG+AGG | - | chr6_4:54955142-54955161 | None:intergenic | 35.0% | |
| GAGGGAAATAAGACTTGTAA+AGG | - | chr6_4:54955145-54955164 | None:intergenic | 35.0% | |
| ATGTACATGGAAAACCTCTT+TGG | - | chr6_4:54955205-54955224 | None:intergenic | 35.0% | |
| TAGACAAACACTGGAAGATT+GGG | - | chr6_4:54955251-54955270 | None:intergenic | 35.0% | |
| ATAGACAAACACTGGAAGAT+TGG | - | chr6_4:54955252-54955271 | None:intergenic | 35.0% | |
| GAATGCTTGAAATGCATGAT+TGG | - | chr6_4:54955305-54955324 | None:intergenic | 35.0% | |
| GGATGTGCAATATGTATGTA+TGG | - | chr6_4:54955383-54955402 | None:intergenic | 35.0% | |
| TGAGTTTGACAGTTGCAATT+TGG | - | chr6_4:54955476-54955495 | None:intergenic | 35.0% | |
| TAGAGACATAGACATTGGAT+TGG | - | chr6_4:54955815-54955834 | None:intergenic | 35.0% | |
| AATGACAATTTACCCCCAAT+TGG | + | chr6_4:54955961-54955980 | Msa0991230:intron | 35.0% | |
| TGACCGATAACAAGATATGT+TGG | - | chr6_4:54956007-54956026 | None:intergenic | 35.0% | |
| TGCTTATATACCCATACTTC+CGG | + | chr6_4:54956061-54956080 | Msa0991230:intron | 35.0% | |
| CTGATAACAAAGCATAAGCT+GGG | - | chr6_4:54956122-54956141 | None:intergenic | 35.0% | |
| ACTGATAACAAAGCATAAGC+TGG | - | chr6_4:54956123-54956142 | None:intergenic | 35.0% | |
| GGTAGATACAAACTGTTCTT+TGG | - | chr6_4:54956222-54956241 | None:intergenic | 35.0% | |
| TGTCTATATCTCTAGCCAAA+CGG | + | chr6_4:54956246-54956265 | Msa0991230:intron | 35.0% | |
| GACCGGAAACATAGATATAT+AGG | - | chr6_4:54956363-54956382 | None:intergenic | 35.0% | |
| GATAGATGCAAGTTGTTCTT+GGG | - | chr6_4:54956402-54956421 | None:intergenic | 35.0% | |
| AGATAGATGCAAGTTGTTCT+TGG | - | chr6_4:54956403-54956422 | None:intergenic | 35.0% | |
| ! | TTTTGTATTCCTTGGTCAAG+TGG | + | chr6_4:54956427-54956446 | Msa0991230:intron | 35.0% |
| AAACCAGGGGATAGAAAATA+GGG | - | chr6_4:54956480-54956499 | None:intergenic | 35.0% | |
| ATGAATGCAAGACAAACAAC+TGG | - | chr6_4:54956559-54956578 | None:intergenic | 35.0% | |
| AGACGAAGTCTTTGAATTGA+CGG | - | chr6_4:54956679-54956698 | None:intergenic | 35.0% | |
| CCGGACAAAGAAACTTAAAT+AGG | + | chr6_4:54956708-54956727 | Msa0991230:intron | 35.0% | |
| AAAAGACTAAAATGCCCCTA+GGG | - | chr6_4:54957032-54957051 | None:intergenic | 35.0% | |
| ! | TTATGGTGGAGGAAAAAAGA+GGG | - | chr6_4:54957557-54957576 | None:intergenic | 35.0% |
| ! | GAAAGTGGTTAGAGTTTGTT+AGG | - | chr6_4:54957606-54957625 | None:intergenic | 35.0% |
| !!! | CAAGGTTGTGAAGTTTTTTG+GGG | - | chr6_4:54957686-54957705 | None:intergenic | 35.0% |
| TTAGCGATGACGAAGTTTAT+GGG | - | chr6_4:54957858-54957877 | None:intergenic | 35.0% | |
| TAACAAGTCCTAGATCTACA+TGG | - | chr6_4:54958187-54958206 | None:intergenic | 35.0% | |
| CCTAAGAGCAAAAACGAAAA+TGG | - | chr6_4:54958520-54958539 | None:intergenic | 35.0% | |
| !! | CCATTTTCGTTTTTGCTCTT+AGG | + | chr6_4:54958517-54958536 | Msa0991230:intron | 35.0% |
| !! | AAGAACTTTTTGAGAGCACA+GGG | - | chr6_4:54958620-54958639 | None:intergenic | 35.0% |
| !! | AAAGAACTTTTTGAGAGCAC+AGG | - | chr6_4:54958621-54958640 | None:intergenic | 35.0% |
| CAAGACCATAGAATGTATCT+AGG | + | chr6_4:54959365-54959384 | Msa0991230:intron | 35.0% | |
| ACTTGCCTAGATACATTCTA+TGG | - | chr6_4:54959373-54959392 | None:intergenic | 35.0% | |
| TCTAGGCAAGTGATGTAATA+AGG | + | chr6_4:54959382-54959401 | Msa0991230:intron | 35.0% | |
| AATGATGTGTGTGCATATGT+CGG | - | chr6_4:54959443-54959462 | None:intergenic | 35.0% | |
| AGATTATGAAAAGAGTGAGG+TGG | - | chr6_4:54959705-54959724 | None:intergenic | 35.0% | |
| !! | TTTTGAAGAATGAGAGAGAG+AGG | - | chr6_4:54959741-54959760 | None:intergenic | 35.0% |
| ATTCTAAGTGAAGAATGGGA+GGG | - | chr6_4:54959914-54959933 | None:intergenic | 35.0% | |
| TATTCTAAGTGAAGAATGGG+AGG | - | chr6_4:54959915-54959934 | None:intergenic | 35.0% | |
| TAAAACATACCCTAGAGACA+CGG | - | chr6_4:54960347-54960366 | None:intergenic | 35.0% | |
| !! | TCTTTTTAGGCTAGGGTTAT+AGG | + | chr6_4:54960408-54960427 | Msa0991230:intron | 35.0% |
| TGAGCATAACCCTAAGATAA+CGG | + | chr6_4:54960540-54960559 | Msa0991230:intron | 35.0% | |
| ! | TGCTAAGTACCGTTATCTTA+GGG | - | chr6_4:54960552-54960571 | None:intergenic | 35.0% |
| ! | TTGCTAAGTACCGTTATCTT+AGG | - | chr6_4:54960553-54960572 | None:intergenic | 35.0% |
| AGTAACTAGTACAACGAAGT+CGG | + | chr6_4:54960615-54960634 | Msa0991230:intron | 35.0% | |
| !! | CATCTCGGTAGTTTTACAAA+CGG | - | chr6_4:54960731-54960750 | None:intergenic | 35.0% |
| GTAGGGATTTATTTGGCAAA+CGG | - | chr6_4:54960982-54961001 | None:intergenic | 35.0% | |
| TTGGGGTTAAACTTAACGTA+GGG | - | chr6_4:54960999-54961018 | None:intergenic | 35.0% | |
| ! | TTTGGGGTTAAACTTAACGT+AGG | - | chr6_4:54961000-54961019 | None:intergenic | 35.0% |
| TTAACCCCAAATGATGTCTA+TGG | + | chr6_4:54961009-54961028 | Msa0991230:intron | 35.0% | |
| AAAAAGAGAACCACTGGATT+AGG | + | chr6_4:54961109-54961128 | Msa0991230:intron | 35.0% | |
| !! | GGAAAAAAATTAGGTGTTGG+TGG | - | chr6_4:54961160-54961179 | None:intergenic | 35.0% |
| TGTTGTTGATGTTGTTCTGT+TGG | - | chr6_4:54961340-54961359 | None:intergenic | 35.0% | |
| ACAACATCAACAACAACAAG+AGG | + | chr6_4:54961345-54961364 | Msa0991230:intron | 35.0% | |
| TTGATGCAAAGGGGAAAATA+GGG | - | chr6_4:54961398-54961417 | None:intergenic | 35.0% | |
| ATTGATGCAAAGGGGAAAAT+AGG | - | chr6_4:54961399-54961418 | None:intergenic | 35.0% | |
| GTTGTTCTATTGATGCAAAG+GGG | - | chr6_4:54961407-54961426 | None:intergenic | 35.0% | |
| AATAGAGAAGAAGAGAAGAG+AGG | - | chr6_4:54961454-54961473 | None:intergenic | 35.0% | |
| AAAACTTCGGAAATCGAAGA+AGG | - | chr6_4:54961594-54961613 | None:intergenic | 35.0% | |
| ! | GATTTCCGAAGTTTTTCGTT+TGG | + | chr6_4:54961599-54961618 | Msa0991230:intron | 35.0% |
| ! | GGATGCTAAACAAGATTTTG+TGG | - | chr6_4:54961967-54961986 | None:intergenic | 35.0% |
| ! | TTTTCAAATGGAGGTCGTTT+TGG | - | chr6_4:54962492-54962511 | None:intergenic | 35.0% |
| ! | GGTTTTTGTTGAAAACCTCA+TGG | - | chr6_4:54962537-54962556 | None:intergenic | 35.0% |
| CTAAGTCTAACATATACCCT+TGG | - | chr6_4:54962810-54962829 | None:intergenic | 35.0% | |
| TAAGGAGGATATGACTACTT+TGG | + | chr6_4:54963029-54963048 | Msa0991230:intron | 35.0% | |
| AAGGAGGATATGACTACTTT+GGG | + | chr6_4:54963030-54963049 | Msa0991230:intron | 35.0% | |
| CGAGTAGAATTAAAAGGTCT+AGG | + | chr6_4:54963090-54963109 | Msa0991230:intron | 35.0% | |
| AAATGACAAGAACAGAGAGA+CGG | - | chr6_4:54963374-54963393 | None:intergenic | 35.0% | |
| ! | CAAATGAGTTGAGAGAGAAA+AGG | - | chr6_4:54963426-54963445 | None:intergenic | 35.0% |
| GTGCTAATTAAGGATGGTAA+TGG | + | chr6_4:54963535-54963554 | Msa0991230:intron | 35.0% | |
| !! | AATTAAGGATGGTAATGGTG+TGG | + | chr6_4:54963540-54963559 | Msa0991230:intron | 35.0% |
| ! | CATTATCATTGGTTGCTAAG+AGG | - | chr6_4:54963611-54963630 | None:intergenic | 35.0% |
| ! | TGACTTTTCTCTTCATCTCT+TGG | + | chr6_4:54963629-54963648 | Msa0991230:intron | 35.0% |
| CAACCACTAAATACGAGTAA+TGG | + | chr6_4:54963705-54963724 | Msa0991230:intron | 35.0% | |
| ! | CTATGATTTTCAGATTGGAG+AGG | + | chr6_4:54964009-54964028 | Msa0991230:intron | 35.0% |
| GCTAGTCCATATTGAAGAAT+TGG | - | chr6_4:54964254-54964273 | None:intergenic | 35.0% | |
| GCTATTATATATTGTCCCAC+AGG | + | chr6_4:54964526-54964545 | Msa0991230:intron | 35.0% | |
| TCTTGAAGATCAAACTCACA+TGG | - | chr6_4:54964561-54964580 | None:intergenic | 35.0% | |
| ATGTGAGTTTGATCTTCAAG+AGG | + | chr6_4:54964560-54964579 | Msa0991230:CDS | 35.0% | |
| GCTGCTATTGAATTATCACA+AGG | + | chr6_4:54964594-54964613 | Msa0991230:CDS | 35.0% | |
| GATTCACCATATAATGACGC+AGG | - | chr6_4:54951927-54951946 | None:intergenic | 40.0% | |
| !! | AACTTGGTTGATAACCCGAA+TGG | + | chr6_4:54951951-54951970 | Msa0991230:CDS | 40.0% |
| GTACTTGATTGGATCCATTC+GGG | - | chr6_4:54951968-54951987 | None:intergenic | 40.0% | |
| TTTGAAAAGCCTGCTGTTAC+TGG | + | chr6_4:54951991-54952010 | Msa0991230:CDS | 40.0% | |
| TTACTGGAAAGATTGCACGT+TGG | + | chr6_4:54952007-54952026 | Msa0991230:CDS | 40.0% | |
| GAAGAACCACTGATCAATGA+AGG | + | chr6_4:54952192-54952211 | Msa0991230:CDS | 40.0% | |
| !! | ACCAATCCCCATTTGCTATT+GGG | - | chr6_4:54952225-54952244 | None:intergenic | 40.0% |
| ! | AAATGGGGATTGGTGTTTGA+TGG | + | chr6_4:54952231-54952250 | Msa0991230:CDS | 40.0% |
| !! | GATGGTGCTGTTAATGCTTA+TGG | + | chr6_4:54952249-54952268 | Msa0991230:CDS | 40.0% |
| GTGCTTAATTCTCAGGTCAT+TGG | - | chr6_4:54952400-54952419 | None:intergenic | 40.0% | |
| ! | TGTCAAGGTGCTTAATTCTC+AGG | - | chr6_4:54952407-54952426 | None:intergenic | 40.0% |
| CAGAATCTCCATAGATGTCA+AGG | - | chr6_4:54952422-54952441 | None:intergenic | 40.0% | |
| CTATGTTTCGTGTCAATCAC+TGG | + | chr6_4:54952607-54952626 | Msa0991230:CDS | 40.0% | |
| TCAATGGTAAACACATGAGC+GGG | - | chr6_4:54952672-54952691 | None:intergenic | 40.0% | |
| ACGTCTTCATCAGTTTGATC+TGG | - | chr6_4:54952702-54952721 | None:intergenic | 40.0% | |
| !! | ATGGGCTAGTAAATTCCTTC+TGG | + | chr6_4:54952821-54952840 | Msa0991230:intron | 40.0% |
| GCTAGTAAATTCCTTCTGGA+CGG | + | chr6_4:54952825-54952844 | Msa0991230:intron | 40.0% | |
| ACGGAGAAATCCTATACAAG+AGG | + | chr6_4:54952844-54952863 | Msa0991230:intron | 40.0% | |
| TGTCGTAGTTCCTCTTGTAT+AGG | - | chr6_4:54952857-54952876 | None:intergenic | 40.0% | |
| ATACAAGAGGAACTACGACA+TGG | + | chr6_4:54952857-54952876 | Msa0991230:intron | 40.0% | |
| ATGTACATGACGGTACCTTT+GGG | + | chr6_4:54952928-54952947 | Msa0991230:intron | 40.0% | |
| CGGCTATTACTGGATAACTA+TGG | + | chr6_4:54952995-54953014 | Msa0991230:intron | 40.0% | |
| ! | GATATAACATTGAGAGCGTG+TGG | - | chr6_4:54953092-54953111 | None:intergenic | 40.0% |
| TAGGATGAAACGATGTCCAT+TGG | - | chr6_4:54953177-54953196 | None:intergenic | 40.0% | |
| TTGCTTGGTCACATTAGCAT+AGG | - | chr6_4:54953240-54953259 | None:intergenic | 40.0% | |
| TGGTCACTACTTACAAAGAC+TGG | + | chr6_4:54953572-54953591 | Msa0991230:intron | 40.0% | |
| ACTTTAACACCATTCAGCCT+CGG | - | chr6_4:54953752-54953771 | None:intergenic | 40.0% | |
| AAGTGGACACCTAACTATGA+AGG | + | chr6_4:54953946-54953965 | Msa0991230:intron | 40.0% | |
| AGGTCCTTATGTTGTCAAGA+AGG | + | chr6_4:54953966-54953985 | Msa0991230:intron | 40.0% | |
| CGCTTTGATTCTTACACACA+TGG | + | chr6_4:54954002-54954021 | Msa0991230:intron | 40.0% | |
| AAAGAAAAGAACAGCGTGGT+AGG | + | chr6_4:54954084-54954103 | Msa0991230:intron | 40.0% | |
| AGATGATCATTGACAGTTGC+AGG | - | chr6_4:54954358-54954377 | None:intergenic | 40.0% | |
| ! | TTCCAAGCTTTGTAAATCCG+TGG | + | chr6_4:54954471-54954490 | Msa0991230:intron | 40.0% |
| GAGTTTCAAACAAGTGGCAT+AGG | - | chr6_4:54954541-54954560 | None:intergenic | 40.0% | |
| GAAAGCAAACCTGAGCAATA+AGG | + | chr6_4:54954676-54954695 | Msa0991230:intron | 40.0% | |
| ! | GCTAAGTTGAAAACCCGAAA+GGG | + | chr6_4:54954847-54954866 | Msa0991230:intron | 40.0% |
| TTCATAGGTTGTCAATCAGC+GGG | - | chr6_4:54954895-54954914 | None:intergenic | 40.0% | |
| CTTCATAGGTTGTCAATCAG+CGG | - | chr6_4:54954896-54954915 | None:intergenic | 40.0% | |
| ACAACCTATGAAGGCAATTC+AGG | + | chr6_4:54954903-54954922 | Msa0991230:intron | 40.0% | |
| TTTGCCTGAATTGCCTTCAT+AGG | - | chr6_4:54954910-54954929 | None:intergenic | 40.0% | |
| GAAGGCAATTCAGGCAAAAA+TGG | + | chr6_4:54954912-54954931 | Msa0991230:intron | 40.0% | |
| AGGCAATTCAGGCAAAAATG+GGG | + | chr6_4:54954914-54954933 | Msa0991230:intron | 40.0% | |
| CTTGGAAGATCCTTTGATAC+AGG | - | chr6_4:54955115-54955134 | None:intergenic | 40.0% | |
| CTGTATCAAAGGATCTTCCA+AGG | + | chr6_4:54955113-54955132 | Msa0991230:intron | 40.0% | |
| TGAAAGACGCATCAAAACCA+TGG | - | chr6_4:54955170-54955189 | None:intergenic | 40.0% | |
| TTTGATGCGTCTTTCAACGA+CGG | + | chr6_4:54955174-54955193 | Msa0991230:intron | 40.0% | |
| ! | TGCTTTTGGGCCAACAAAAA+TGG | + | chr6_4:54955914-54955933 | Msa0991230:intron | 40.0% |
| ! | GGAAGTATGGGTATATAAGC+AGG | - | chr6_4:54956062-54956081 | None:intergenic | 40.0% |
| GGCTAGAGATATAGACAGAA+GGG | - | chr6_4:54956243-54956262 | None:intergenic | 40.0% | |
| TGGCTAGAGATATAGACAGA+AGG | - | chr6_4:54956244-54956263 | None:intergenic | 40.0% | |
| GGCAGATACAAGTTGTTCTT+TGG | - | chr6_4:54956342-54956361 | None:intergenic | 40.0% | |
| ATAGGGTACAAGCTGTTCTT+TGG | - | chr6_4:54956463-54956482 | None:intergenic | 40.0% | |
| CAAACCAGGGGATAGAAAAT+AGG | - | chr6_4:54956481-54956500 | None:intergenic | 40.0% | |
| ATGGAACATGTCATGTCACT+GGG | - | chr6_4:54956531-54956550 | None:intergenic | 40.0% | |
| TATGGAACATGTCATGTCAC+TGG | - | chr6_4:54956532-54956551 | None:intergenic | 40.0% | |
| AGACAAACAACTGGAGTCTA+TGG | - | chr6_4:54956550-54956569 | None:intergenic | 40.0% | |
| GACGAAGTCTTTGAATTGAC+GGG | - | chr6_4:54956678-54956697 | None:intergenic | 40.0% | |
| ! | CAGCTGTCATACCCTAATTT+TGG | + | chr6_4:54956733-54956752 | Msa0991230:intron | 40.0% |
| AAAGACTAAAATGCCCCTAG+GGG | - | chr6_4:54957031-54957050 | None:intergenic | 40.0% | |
| GAAAAGACTAAAATGCCCCT+AGG | - | chr6_4:54957033-54957052 | None:intergenic | 40.0% | |
| ACCAATGAAACAATGCCATG+TGG | - | chr6_4:54957410-54957429 | None:intergenic | 40.0% | |
| ! | GTTATGGTGGAGGAAAAAAG+AGG | - | chr6_4:54957558-54957577 | None:intergenic | 40.0% |
| ! | AGGTTAGTTAGGGTGGTTTA+GGG | - | chr6_4:54957656-54957675 | None:intergenic | 40.0% |
| ! | AAGGTTAGTTAGGGTGGTTT+AGG | - | chr6_4:54957657-54957676 | None:intergenic | 40.0% |
| !!! | AAGTTTTTTGGGGTGGTTGA+AGG | - | chr6_4:54957676-54957695 | None:intergenic | 40.0% |
| GTTTGGTTATGGAGGATTCA+AGG | - | chr6_4:54957704-54957723 | None:intergenic | 40.0% | |
| ! | TGATGAAGGTTTGGTTATGG+AGG | - | chr6_4:54957712-54957731 | None:intergenic | 40.0% |
| ! | CGATGATGAAGGTTTGGTTA+TGG | - | chr6_4:54957715-54957734 | None:intergenic | 40.0% |
| TGAAGACGATGATGAAGGTT+TGG | - | chr6_4:54957721-54957740 | None:intergenic | 40.0% | |
| GCATAAGTGAAGAGTAGTGA+TGG | - | chr6_4:54957779-54957798 | None:intergenic | 40.0% | |
| ATGCATTCTCACAAACACCT+TGG | + | chr6_4:54957795-54957814 | Msa0991230:intron | 40.0% | |
| GTTAGCGATGACGAAGTTTA+TGG | - | chr6_4:54957859-54957878 | None:intergenic | 40.0% | |
| !! | CTTTGTTCTTGCTGTTGTTC+TGG | - | chr6_4:54957959-54957978 | None:intergenic | 40.0% |
| GAACAACAGCAAGAACAAAG+AGG | + | chr6_4:54957959-54957978 | Msa0991230:intron | 40.0% | |
| ATCCTTGCTCAATCTGGATT+CGG | - | chr6_4:54958073-54958092 | None:intergenic | 40.0% | |
| CTTGTAACGAACCAGAAACA+AGG | + | chr6_4:54958105-54958124 | Msa0991230:intron | 40.0% | |
| ! | TCACTGCATTTCCTTGTTTC+TGG | - | chr6_4:54958119-54958138 | None:intergenic | 40.0% |
| AGGAAATGCAGTGAACTGAA+AGG | + | chr6_4:54958125-54958144 | Msa0991230:intron | 40.0% | |
| TTCCCTTTCCATGTAGATCT+AGG | + | chr6_4:54958176-54958195 | Msa0991230:intron | 40.0% | |
| GTCCTAGATCTACATGGAAA+GGG | - | chr6_4:54958181-54958200 | None:intergenic | 40.0% | |
| AGTCCTAGATCTACATGGAA+AGG | - | chr6_4:54958182-54958201 | None:intergenic | 40.0% | |
| ACAAATCCGAATAGAGGAGA+GGG | + | chr6_4:54958230-54958249 | Msa0991230:intron | 40.0% | |
| AGGTGAACGGAGAAGAAATA+GGG | - | chr6_4:54958362-54958381 | None:intergenic | 40.0% | |
| !! | GCAAAAACGAAAATGGGCTA+GGG | - | chr6_4:54958513-54958532 | None:intergenic | 40.0% |
| ! | AGCAAAAACGAAAATGGGCT+AGG | - | chr6_4:54958514-54958533 | None:intergenic | 40.0% |
| TACAGAATACACACACAGCT+GGG | - | chr6_4:54958543-54958562 | None:intergenic | 40.0% | |
| ATACAGAATACACACACAGC+TGG | - | chr6_4:54958544-54958563 | None:intergenic | 40.0% | |
| !! | AGAACTTTTTGAGAGCACAG+GGG | - | chr6_4:54958619-54958638 | None:intergenic | 40.0% |
| TAGTGGCACAAGGGATAATA+AGG | - | chr6_4:54959190-54959209 | None:intergenic | 40.0% | |
| CAAAATGGTTAGTGGCACAA+GGG | - | chr6_4:54959199-54959218 | None:intergenic | 40.0% | |
| ACAAAATGGTTAGTGGCACA+AGG | - | chr6_4:54959200-54959219 | None:intergenic | 40.0% | |
| AGTGAGATGAGTTGTGCTTA+TGG | - | chr6_4:54959239-54959258 | None:intergenic | 40.0% | |
| !! | ACAATGGGATTTTGATCCCA+AGG | - | chr6_4:54959606-54959625 | None:intergenic | 40.0% |
| TTCATAATCTCATGCCCTTG+AGG | + | chr6_4:54959715-54959734 | Msa0991230:intron | 40.0% | |
| !! | TTTTTGGAAGAGAACTACGG+TGG | + | chr6_4:54959806-54959825 | Msa0991230:intron | 40.0% |
| ! | GGTGGATTTGATCCCTTAAA+CGG | + | chr6_4:54959824-54959843 | Msa0991230:intron | 40.0% |
| GTGGATTTGATCCCTTAAAC+GGG | + | chr6_4:54959825-54959844 | Msa0991230:intron | 40.0% | |
| TAACAAAGCGGTTCAAGAGA+AGG | + | chr6_4:54960280-54960299 | Msa0991230:intron | 40.0% | |
| TTCAAGAGAAGGCAAGTACT+AGG | + | chr6_4:54960291-54960310 | Msa0991230:intron | 40.0% | |
| ATCTTAGGGTTATGCTCAAG+AGG | - | chr6_4:54960538-54960557 | None:intergenic | 40.0% | |
| GGCAGGTATTCACCAATATT+AGG | - | chr6_4:54960585-54960604 | None:intergenic | 40.0% | |
| TACTAGTTACTACCTCACTC+AGG | - | chr6_4:54960606-54960625 | None:intergenic | 40.0% | |
| AAGTCGGTAGTTAGCGAAAT+AGG | + | chr6_4:54960631-54960650 | Msa0991230:intron | 40.0% | |
| CGTTTGTAAAACTACCGAGA+TGG | + | chr6_4:54960729-54960748 | Msa0991230:intron | 40.0% | |
| TATCAACACACTCTCCATCT+CGG | - | chr6_4:54960746-54960765 | None:intergenic | 40.0% | |
| !! | TATCGGCTTATTGGATCGTT+TGG | + | chr6_4:54960880-54960899 | Msa0991230:intron | 40.0% |
| TCCACCATAGACATCATTTG+GGG | - | chr6_4:54961016-54961035 | None:intergenic | 40.0% | |
| GTCCACCATAGACATCATTT+GGG | - | chr6_4:54961017-54961036 | None:intergenic | 40.0% | |
| !!! | TCTATGGTGGACCACTTTTA+AGG | - | chr6_4:54961043-54961062 | None:intergenic | 40.0% |
| AGAAGAAGAGAAGAGAGGAA+AGG | - | chr6_4:54961449-54961468 | None:intergenic | 40.0% | |
| AGAAACACGAAGAAGGGTTT+GGG | - | chr6_4:54961487-54961506 | None:intergenic | 40.0% | |
| TTAGCGAGAAACACGAAGAA+GGG | - | chr6_4:54961493-54961512 | None:intergenic | 40.0% | |
| ATTAGCGAGAAACACGAAGA+AGG | - | chr6_4:54961494-54961513 | None:intergenic | 40.0% | |
| AAGGGAAGAAGAAGAAGATG+GGG | - | chr6_4:54962289-54962308 | None:intergenic | 40.0% | |
| GAAGGGAAGAAGAAGAAGAT+GGG | - | chr6_4:54962290-54962309 | None:intergenic | 40.0% | |
| AGAAGGGAAGAAGAAGAAGA+TGG | - | chr6_4:54962291-54962310 | None:intergenic | 40.0% | |
| ! | GGTATTTTCTTGGCCAAATG+AGG | - | chr6_4:54962366-54962385 | None:intergenic | 40.0% |
| AGGAGAGGTGATCACAAAAA+TGG | - | chr6_4:54962387-54962406 | None:intergenic | 40.0% | |
| GATTGGGACAACTTTATCGA+CGG | + | chr6_4:54962573-54962592 | Msa0991230:intron | 40.0% | |
| ATATACCCTTGGGCCATATT+AGG | - | chr6_4:54962799-54962818 | None:intergenic | 40.0% | |
| AGGAGGATATGACTACTTTG+GGG | + | chr6_4:54963031-54963050 | Msa0991230:intron | 40.0% | |
| TGAAAGGATGAGATGATGAG+TGG | + | chr6_4:54963185-54963204 | Msa0991230:intron | 40.0% | |
| AATGACAAGAACAGAGAGAC+GGG | - | chr6_4:54963373-54963392 | None:intergenic | 40.0% | |
| !!! | GGAGATTTTAAGTTGGTGTG+TGG | + | chr6_4:54963513-54963532 | Msa0991230:intron | 40.0% |
| ! | TTGGTGTGTGGTGCTAATTA+AGG | + | chr6_4:54963525-54963544 | Msa0991230:intron | 40.0% |
| ! | TGTGTGGTGCTAATTAAGGA+TGG | + | chr6_4:54963529-54963548 | Msa0991230:intron | 40.0% |
| TCTCAAAGAATGGTCCATGA+TGG | + | chr6_4:54963978-54963997 | Msa0991230:intron | 40.0% | |
| TTAGCCTAGATTGAGTATGC+TGG | + | chr6_4:54964186-54964205 | Msa0991230:intron | 40.0% | |
| CTTACCAGCATACTCAATCT+AGG | - | chr6_4:54964193-54964212 | None:intergenic | 40.0% | |
| TGAGTTTGATCTTCAAGAGG+AGG | + | chr6_4:54964563-54964582 | Msa0991230:CDS | 40.0% | |
| GAGTTTGATCTTCAAGAGGA+GGG | + | chr6_4:54964564-54964583 | Msa0991230:CDS | 40.0% | |
| !! | AGACTTGTTGTGCTCTAGCT+TGG | + | chr6_4:54951890-54951909 | Msa0991230:CDS | 45.0% |
| !! | GACTTGTTGTGCTCTAGCTT+GGG | + | chr6_4:54951891-54951910 | Msa0991230:CDS | 45.0% |
| CATATAATGACGCAGGCGTT+TGG | - | chr6_4:54951920-54951939 | None:intergenic | 45.0% | |
| CAAACGCCTGCGTCATTATA+TGG | + | chr6_4:54951918-54951937 | Msa0991230:CDS | 45.0% | |
| GCAATCTTTCCAGTAACAGC+AGG | - | chr6_4:54952003-54952022 | None:intergenic | 45.0% | |
| ATCGGCTGGTAATCATCAAG+AGG | - | chr6_4:54952120-54952139 | None:intergenic | 45.0% | |
| GGAAGTCAAACTTAATCGGC+TGG | - | chr6_4:54952134-54952153 | None:intergenic | 45.0% | |
| !! | CCAATCCCCATTTGCTATTG+GGG | - | chr6_4:54952224-54952243 | None:intergenic | 45.0% |
| !! | CACCAATCCCCATTTGCTAT+TGG | - | chr6_4:54952226-54952245 | None:intergenic | 45.0% |
| AGCCATCATTGTAACTCCAC+AGG | + | chr6_4:54952284-54952303 | Msa0991230:CDS | 45.0% | |
| GCCATCATTGTAACTCCACA+GGG | + | chr6_4:54952285-54952304 | Msa0991230:CDS | 45.0% | |
| CCATCATTGTAACTCCACAG+GGG | + | chr6_4:54952286-54952305 | Msa0991230:CDS | 45.0% | |
| AGGGATCAGCTTCTCATGAT+GGG | - | chr6_4:54952481-54952500 | None:intergenic | 45.0% | |
| AAGGGATCAGCTTCTCATGA+TGG | - | chr6_4:54952482-54952501 | None:intergenic | 45.0% | |
| ACAAGCGTCTTGCATAGTCA+CGG | - | chr6_4:54952506-54952525 | None:intergenic | 45.0% | |
| ! | GATTTTCATCCCGAGGGATA+TGG | - | chr6_4:54952557-54952576 | None:intergenic | 45.0% |
| ! | CCATCTGATTTTCATCCCGA+GGG | - | chr6_4:54952563-54952582 | None:intergenic | 45.0% |
| AAGCCGCTGCACTTTGATTA+CGG | - | chr6_4:54952643-54952662 | None:intergenic | 45.0% | |
| CAGAATCGTGAATATCCACC+TGG | + | chr6_4:54952765-54952784 | Msa0991230:intron | 45.0% | |
| !! | TTATCTCTGTTGGAAGCACC+AGG | - | chr6_4:54952786-54952805 | None:intergenic | 45.0% |
| TTTACTAGCCCATCGTCTCA+AGG | - | chr6_4:54952814-54952833 | None:intergenic | 45.0% | |
| ATAGGATTTCTCCGTCCAGA+AGG | - | chr6_4:54952839-54952858 | None:intergenic | 45.0% | |
| GATGTACATGACGGTACCTT+TGG | + | chr6_4:54952927-54952946 | Msa0991230:intron | 45.0% | |
| TGTTAAGAGCCGGCTATTAC+TGG | + | chr6_4:54952985-54953004 | Msa0991230:intron | 45.0% | |
| GGCATCTCTTAGCATGTTTG+TGG | - | chr6_4:54953031-54953050 | None:intergenic | 45.0% | |
| ! | ATAACATTGAGAGCGTGTGG+AGG | - | chr6_4:54953089-54953108 | None:intergenic | 45.0% |
| TCAATGCCCCACATAGAGAA+AGG | - | chr6_4:54953125-54953144 | None:intergenic | 45.0% | |
| !! | ATGTGGGGCATTGACATGAT+CGG | + | chr6_4:54953131-54953150 | Msa0991230:intron | 45.0% |
| ! | CGATGTCCATTGGAAGCTTT+TGG | - | chr6_4:54953167-54953186 | None:intergenic | 45.0% |
| TGGACATCGTTTCATCCTAG+TGG | + | chr6_4:54953178-54953197 | Msa0991230:intron | 45.0% | |
| TGCTAATGTGACCAAGCAAG+TGG | + | chr6_4:54953241-54953260 | Msa0991230:intron | 45.0% | |
| GAACTTCACAACCACTTGCT+TGG | - | chr6_4:54953255-54953274 | None:intergenic | 45.0% | |
| ! | CCATTCATCTGAGGTCTGTA+AGG | - | chr6_4:54953505-54953524 | None:intergenic | 45.0% |
| CCTTACAGACCTCAGATGAA+TGG | + | chr6_4:54953502-54953521 | Msa0991230:intron | 45.0% | |
| TCAACTGCACCATTCATCTG+AGG | - | chr6_4:54953514-54953533 | None:intergenic | 45.0% | |
| TCAGATGAATGGTGCAGTTG+AGG | + | chr6_4:54953513-54953532 | Msa0991230:intron | 45.0% | |
| ! | ATGCTACCTTTTGCCTTGCA+TGG | + | chr6_4:54953601-54953620 | Msa0991230:intron | 45.0% |
| TGTAGTACGGTAACCATGCA+AGG | - | chr6_4:54953617-54953636 | None:intergenic | 45.0% | |
| TTGAACTGCGCACTGTAGTA+CGG | - | chr6_4:54953630-54953649 | None:intergenic | 45.0% | |
| ATGGAATCTCCACTTCCAGA+GGG | - | chr6_4:54953699-54953718 | None:intergenic | 45.0% | |
| TCCATCTCTTCGAGTGATCA+TGG | + | chr6_4:54953714-54953733 | Msa0991230:intron | 45.0% | |
| TCCATGATCACTCGAAGAGA+TGG | - | chr6_4:54953718-54953737 | None:intergenic | 45.0% | |
| CGTATGGATGTTATGGCTCA+TGG | + | chr6_4:54953805-54953824 | Msa0991230:intron | 45.0% | |
| CTTCCTTGAATTCTCGAGGT+CGG | - | chr6_4:54953876-54953895 | None:intergenic | 45.0% | |
| GTTGTCAAGAAGGCTTTCTC+TGG | + | chr6_4:54953976-54953995 | Msa0991230:intron | 45.0% | |
| !!! | TTTCGGGTTTTCGATACACC+GGG | - | chr6_4:54954149-54954168 | None:intergenic | 45.0% |
| !!! | CTTTCGGGTTTTCGATACAC+CGG | - | chr6_4:54954150-54954169 | None:intergenic | 45.0% |
| GGTGTATCGAAAACCCGAAA+GGG | + | chr6_4:54954149-54954168 | Msa0991230:intron | 45.0% | |
| ! | TTTTGCTTGGATCGCCCTTT+CGG | - | chr6_4:54954166-54954185 | None:intergenic | 45.0% |
| GGCGATCCAAGCAAAAGTTA+GGG | + | chr6_4:54954170-54954189 | Msa0991230:intron | 45.0% | |
| ! | TTTTGCATGAACCGCCCTTT+CGG | - | chr6_4:54954276-54954295 | None:intergenic | 45.0% |
| CTCCACGGATTTACAAAGCT+TGG | - | chr6_4:54954476-54954495 | None:intergenic | 45.0% | |
| AATCCGTGGAGTTATGCCTT+TGG | + | chr6_4:54954485-54954504 | Msa0991230:intron | 45.0% | |
| ! | TAGCCAAAGGCATAACTCCA+CGG | - | chr6_4:54954491-54954510 | None:intergenic | 45.0% |
| ATTGACCACAGATCATCCTG+GGG | - | chr6_4:54954775-54954794 | None:intergenic | 45.0% | |
| CATTGACCACAGATCATCCT+GGG | - | chr6_4:54954776-54954795 | None:intergenic | 45.0% | |
| ! | CGCTAAGTTGAAAACCCGAA+AGG | + | chr6_4:54954846-54954865 | Msa0991230:intron | 45.0% |
| AAGTTGAAAACCCGAAAGGG+CGG | + | chr6_4:54954850-54954869 | Msa0991230:intron | 45.0% | |
| ! | CGCTGATTGACAACCTATGA+AGG | + | chr6_4:54954894-54954913 | Msa0991230:intron | 45.0% |
| !!! | TTTCGGGTTTTCGATTCACC+GGG | - | chr6_4:54954960-54954979 | None:intergenic | 45.0% |
| !!! | CTTTCGGGTTTTCGATTCAC+CGG | - | chr6_4:54954961-54954980 | None:intergenic | 45.0% |
| GGTGAATCGAAAACCCGAAA+GGG | + | chr6_4:54954960-54954979 | Msa0991230:intron | 45.0% | |
| GGTTCAGGCAAAAATGGGAT+TGG | + | chr6_4:54954984-54955003 | Msa0991230:intron | 45.0% | |
| ! | GTCAGTGCTGGGTAAACATT+GGG | - | chr6_4:54955075-54955094 | None:intergenic | 45.0% |
| ! | TGTCAGTGCTGGGTAAACAT+TGG | - | chr6_4:54955076-54955095 | None:intergenic | 45.0% |
| ACTTGTAAAGGAGGGATCCT+TGG | - | chr6_4:54955133-54955152 | None:intergenic | 45.0% | |
| !! | AGTCTTATTTCCCTCAGCCA+TGG | + | chr6_4:54955150-54955169 | Msa0991230:intron | 45.0% |
| TCGCAGAGATAGACAAACAC+TGG | - | chr6_4:54955260-54955279 | None:intergenic | 45.0% | |
| AGCAGGTACAAGCTGTTCTT+TGG | - | chr6_4:54956045-54956064 | None:intergenic | 45.0% | |
| ! | TGTCGTTTGTCCGGAAGTAT+GGG | - | chr6_4:54956074-54956093 | None:intergenic | 45.0% |
| ! | TTGTCGTTTGTCCGGAAGTA+TGG | - | chr6_4:54956075-54956094 | None:intergenic | 45.0% |
| ! | GATCGAACTTGTCGTTTGTC+CGG | - | chr6_4:54956083-54956102 | None:intergenic | 45.0% |
| GCTGGGTACAAACTGTTCTT+TGG | - | chr6_4:54956105-54956124 | None:intergenic | 45.0% | |
| GGTAGGTGCAAACTGTTCTT+TGG | - | chr6_4:54956163-54956182 | None:intergenic | 45.0% | |
| ! | ACGATGTGGTGATGATCCAA+CGG | + | chr6_4:54956186-54956205 | Msa0991230:intron | 45.0% |
| GGTAGGCACAAACTGTTCTT+TGG | - | chr6_4:54956282-54956301 | None:intergenic | 45.0% | |
| GTTGTTCTTGGGATCGAACT+TGG | - | chr6_4:54956391-54956410 | None:intergenic | 45.0% | |
| ! | GTACCCTATTTTCTATCCCC+TGG | + | chr6_4:54956474-54956493 | Msa0991230:intron | 45.0% |
| TGGAACATGTCATGTCACTG+GGG | - | chr6_4:54956530-54956549 | None:intergenic | 45.0% | |
| TTTGAGTCAGTTTAGCCCCT+AGG | + | chr6_4:54957013-54957032 | Msa0991230:intron | 45.0% | |
| TTGAGTCAGTTTAGCCCCTA+GGG | + | chr6_4:54957014-54957033 | Msa0991230:intron | 45.0% | |
| !! | TCTGAGTCGTTTTAGTCCCT+AGG | + | chr6_4:54957172-54957191 | Msa0991230:intron | 45.0% |
| !! | CTGAGTCGTTTTAGTCCCTA+GGG | + | chr6_4:54957173-54957192 | Msa0991230:intron | 45.0% |
| !! | TGAGTCGTTTTAGTCCCTAG+GGG | + | chr6_4:54957174-54957193 | Msa0991230:intron | 45.0% |
| GTTACAAGTCAAGTGCCACA+TGG | + | chr6_4:54957392-54957411 | Msa0991230:intron | 45.0% | |
| GCCACATGGCATTGTTTCAT+TGG | + | chr6_4:54957406-54957425 | Msa0991230:intron | 45.0% | |
| ATAGGTGATGTGGGAATGCT+TGG | - | chr6_4:54957433-54957452 | None:intergenic | 45.0% | |
| GAGGAAAGTTGTTATGGTGG+AGG | - | chr6_4:54957568-54957587 | None:intergenic | 45.0% | |
| GTGGAGGAAAGTTGTTATGG+TGG | - | chr6_4:54957571-54957590 | None:intergenic | 45.0% | |
| ! | GTGGTGGAGGAAAGTTGTTA+TGG | - | chr6_4:54957574-54957593 | None:intergenic | 45.0% |
| !! | GTTAGAGTTTGTTAGGGTGG+AGG | - | chr6_4:54957599-54957618 | None:intergenic | 45.0% |
| !! | GTGGTTAGAGTTTGTTAGGG+TGG | - | chr6_4:54957602-54957621 | None:intergenic | 45.0% |
| GTTAGAGGTGAGAGAGAAAG+TGG | - | chr6_4:54957621-54957640 | None:intergenic | 45.0% | |
| TTAGTTAGGGTGGTTTAGGG+TGG | - | chr6_4:54957653-54957672 | None:intergenic | 45.0% | |
| ! | TGGTTGAAGGTTAGTTAGGG+TGG | - | chr6_4:54957663-54957682 | None:intergenic | 45.0% |
| ! | GGGTGGTTGAAGGTTAGTTA+GGG | - | chr6_4:54957666-54957685 | None:intergenic | 45.0% |
| !!! | GGTTGTGAAGTTTTTTGGGG+TGG | - | chr6_4:54957683-54957702 | None:intergenic | 45.0% |
| GAGGTTGAAGACGATGATGA+AGG | - | chr6_4:54957726-54957745 | None:intergenic | 45.0% | |
| ! | ACGAAGTTTATGGGCTGTGA+CGG | - | chr6_4:54957849-54957868 | None:intergenic | 45.0% |
| ! | TTGTTGTTCGAACTCGCGAA+CGG | - | chr6_4:54957904-54957923 | None:intergenic | 45.0% |
| GCGAGTTCGAACAACAACAA+CGG | + | chr6_4:54957907-54957926 | Msa0991230:intron | 45.0% | |
| ! | GGCTGAATCATGATTTGTCG+CGG | - | chr6_4:54958052-54958071 | None:intergenic | 45.0% |
| GTTTGCATCCTTGCTCAATC+TGG | - | chr6_4:54958079-54958098 | None:intergenic | 45.0% | |
| TGCAGTGAACTGAAAGGTAG+AGG | + | chr6_4:54958131-54958150 | Msa0991230:intron | 45.0% | |
| CTGAGCACAAATCCGAATAG+AGG | + | chr6_4:54958224-54958243 | Msa0991230:intron | 45.0% | |
| CACAAATCCGAATAGAGGAG+AGG | + | chr6_4:54958229-54958248 | Msa0991230:intron | 45.0% | |
| TGAAGAAAAAAACTCCGGCG+CGG | + | chr6_4:54958291-54958310 | Msa0991230:intron | 45.0% | |
| GAACGGAGAAGAAATAGGGA+CGG | - | chr6_4:54958358-54958377 | None:intergenic | 45.0% | |
| CAGGTGAACGGAGAAGAAAT+AGG | - | chr6_4:54958363-54958382 | None:intergenic | 45.0% | |
| ! | CTATTTCTTCTCCGTTCACC+TGG | + | chr6_4:54958361-54958380 | Msa0991230:intron | 45.0% |
| TTGCCTACGTACCCGTTTAA+GGG | - | chr6_4:54959839-54959858 | None:intergenic | 45.0% | |
| GCGCGCGTAGAAATTAAAGA+CGG | + | chr6_4:54959982-54960001 | Msa0991230:intron | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | - | chr6_4:54960074-54960093 | None:intergenic | 45.0% | |
| AGTACTAGGAGCTTCAAGGT+AGG | + | chr6_4:54960305-54960324 | Msa0991230:intron | 45.0% | |
| GGGATTTATTTGGCAAACGG+AGG | - | chr6_4:54960979-54960998 | None:intergenic | 45.0% | |
| ACCCCAAATGATGTCTATGG+TGG | + | chr6_4:54961012-54961031 | Msa0991230:intron | 45.0% | |
| GGTCCACCATAGACATCATT+TGG | - | chr6_4:54961018-54961037 | None:intergenic | 45.0% | |
| ! | TGGTGGACCAACCTTAAAAG+TGG | + | chr6_4:54961029-54961048 | Msa0991230:intron | 45.0% |
| !!! | TGGTGGACCACTTTTAAGGT+TGG | - | chr6_4:54961039-54961058 | None:intergenic | 45.0% |
| AATAGACGTGCCTAATCCAG+TGG | - | chr6_4:54961122-54961141 | None:intergenic | 45.0% | |
| GAGAAACACGAAGAAGGGTT+TGG | - | chr6_4:54961488-54961507 | None:intergenic | 45.0% | |
| TTATACCGGACGTATTCCAC+AGG | - | chr6_4:54961707-54961726 | None:intergenic | 45.0% | |
| !! | CGAGTGTTGGACGTTTATAC+CGG | - | chr6_4:54961721-54961740 | None:intergenic | 45.0% |
| ACTAAACGTGGGATGTTGTG+TGG | - | chr6_4:54962213-54962232 | None:intergenic | 45.0% | |
| GTGTTTCACGTGAGAGAGAA+GGG | - | chr6_4:54962258-54962277 | None:intergenic | 45.0% | |
| TGTGTTTCACGTGAGAGAGA+AGG | - | chr6_4:54962259-54962278 | None:intergenic | 45.0% | |
| TCTCTCACGTGAAACACACA+TGG | + | chr6_4:54962261-54962280 | Msa0991230:intron | 45.0% | |
| AGGGAAGAAGAAGAAGATGG+GGG | - | chr6_4:54962288-54962307 | None:intergenic | 45.0% | |
| CCAAATGAGGTCGAATGTTG+AGG | - | chr6_4:54962353-54962372 | None:intergenic | 45.0% | |
| CCTCAACATTCGACCTCATT+TGG | + | chr6_4:54962350-54962369 | Msa0991230:intron | 45.0% | |
| !! | TAAATTAGTGGGCTGTGCAG+AGG | - | chr6_4:54962411-54962430 | None:intergenic | 45.0% |
| AAACCTCATGGGGAAGAAGA+TGG | - | chr6_4:54962525-54962544 | None:intergenic | 45.0% | |
| ! | AATGGCCATGCGTACTTTTC+CGG | - | chr6_4:54962628-54962647 | None:intergenic | 45.0% |
| AAGCTTCCTAATATGGCCCA+AGG | + | chr6_4:54962790-54962809 | Msa0991230:intron | 45.0% | |
| AGCTTCCTAATATGGCCCAA+GGG | + | chr6_4:54962791-54962810 | Msa0991230:intron | 45.0% | |
| !! | CTTGTCATTTGCTGCTTTGC+TGG | + | chr6_4:54963384-54963403 | Msa0991230:intron | 45.0% |
| AATGGTGTGGAAGACAGTGA+AGG | + | chr6_4:54963553-54963572 | Msa0991230:intron | 45.0% | |
| GTGGAAGACAGTGAAGGTAA+TGG | + | chr6_4:54963559-54963578 | Msa0991230:intron | 45.0% | |
| ! | ACATGGAAGTGCATACCTGT+GGG | - | chr6_4:54964544-54964563 | None:intergenic | 45.0% |
| !! | TTGAAATTAAAATAATTAAT+AGG | - | chr6_4:54961067-54961086 | None:intergenic | 5.0% |
| !! | ATAAAAACATAAAAATAATT+GGG | - | chr6_4:54962142-54962161 | None:intergenic | 5.0% |
| !! | AATAAAAACATAAAAATAAT+TGG | - | chr6_4:54962143-54962162 | None:intergenic | 5.0% |
| GACAAGCAAGATGCTCAGCA+AGG | - | chr6_4:54952095-54952114 | None:intergenic | 50.0% | |
| ACCACTGATCAATGAAGGGC+CGG | + | chr6_4:54952197-54952216 | Msa0991230:CDS | 50.0% | |
| CCCCAATAGCAAATGGGGAT+TGG | + | chr6_4:54952221-54952240 | Msa0991230:CDS | 50.0% | |
| CCCCTGTGGAGTTACAATGA+TGG | - | chr6_4:54952289-54952308 | None:intergenic | 50.0% | |
| AAAGGAATGTGATGCCCCTG+TGG | - | chr6_4:54952303-54952322 | None:intergenic | 50.0% | |
| GTCTTGCATAGTCACGGCAA+GGG | - | chr6_4:54952500-54952519 | None:intergenic | 50.0% | |
| TTGAGCTGCACCATATCCCT+CGG | + | chr6_4:54952544-54952563 | Msa0991230:CDS | 50.0% | |
| CCCTCGGGATGAAAATCAGA+TGG | + | chr6_4:54952560-54952579 | Msa0991230:CDS | 50.0% | |
| ! | GCCATCTGATTTTCATCCCG+AGG | - | chr6_4:54952564-54952583 | None:intergenic | 50.0% |
| TGCCCGTAATCAAAGTGCAG+CGG | + | chr6_4:54952637-54952656 | Msa0991230:CDS | 50.0% | |
| AGCCGCTGCACTTTGATTAC+GGG | - | chr6_4:54952642-54952661 | None:intergenic | 50.0% | |
| !! | TACCTTTGGGACCCATGCTT+CGG | + | chr6_4:54952941-54952960 | Msa0991230:intron | 50.0% |
| CATAGTGTGACCCGAAGCAT+GGG | - | chr6_4:54952955-54952974 | None:intergenic | 50.0% | |
| ACATAGTGTGACCCGAAGCA+TGG | - | chr6_4:54952956-54952975 | None:intergenic | 50.0% | |
| CCACATAGAGAAAGGCCATG+GGG | - | chr6_4:54953117-54953136 | None:intergenic | 50.0% | |
| CCCACATAGAGAAAGGCCAT+GGG | - | chr6_4:54953118-54953137 | None:intergenic | 50.0% | |
| CCCATGGCCTTTCTCTATGT+GGG | + | chr6_4:54953115-54953134 | Msa0991230:intron | 50.0% | |
| CCATGGCCTTTCTCTATGTG+GGG | + | chr6_4:54953116-54953135 | Msa0991230:intron | 50.0% | |
| CGGTAACCATGCAAGGCAAA+AGG | - | chr6_4:54953610-54953629 | None:intergenic | 50.0% | |
| ACTACAGTGCGCAGTTCAAC+CGG | + | chr6_4:54953631-54953650 | Msa0991230:intron | 50.0% | |
| CAAAGAGAAAGGAGTTGCCC+CGG | - | chr6_4:54953653-54953672 | None:intergenic | 50.0% | |
| TATGGAAGCAGTTCTCCCTC+TGG | + | chr6_4:54953681-54953700 | Msa0991230:intron | 50.0% | |
| GATGGAATCTCCACTTCCAG+AGG | - | chr6_4:54953700-54953719 | None:intergenic | 50.0% | |
| CATGGAAGCAAAGTTGACCG+AGG | + | chr6_4:54953732-54953751 | Msa0991230:intron | 50.0% | |
| CAAAGTTGACCGAGGCTGAA+TGG | + | chr6_4:54953740-54953759 | Msa0991230:intron | 50.0% | |
| AGTCCGACCTCGAGAATTCA+AGG | + | chr6_4:54953870-54953889 | Msa0991230:intron | 50.0% | |
| CGACCTCGAGAATTCAAGGA+AGG | + | chr6_4:54953874-54953893 | Msa0991230:intron | 50.0% | |
| TCGCCTTCCTTGAATTCTCG+AGG | - | chr6_4:54953880-54953899 | None:intergenic | 50.0% | |
| TAAGTCAACAACCCGACCCA+AGG | + | chr6_4:54953920-54953939 | Msa0991230:intron | 50.0% | |
| AAGTCAACAACCCGACCCAA+GGG | + | chr6_4:54953921-54953940 | Msa0991230:intron | 50.0% | |
| GTCAAGAAGGCTTTCTCTGG+TGG | + | chr6_4:54953979-54953998 | Msa0991230:intron | 50.0% | |
| TGGTAGGTCGAAAACCCGAA+AGG | + | chr6_4:54954100-54954119 | Msa0991230:intron | 50.0% | |
| GGTAGGTCGAAAACCCGAAA+GGG | + | chr6_4:54954101-54954120 | Msa0991230:intron | 50.0% | |
| CTAGGCAAAAATGCGCTTCC+CGG | + | chr6_4:54954128-54954147 | Msa0991230:intron | 50.0% | |
| CGGTGTATCGAAAACCCGAA+AGG | + | chr6_4:54954148-54954167 | Msa0991230:intron | 50.0% | |
| TTTGCTTGGATCGCCCTTTC+GGG | - | chr6_4:54954165-54954184 | None:intergenic | 50.0% | |
| GGGCGATCCAAGCAAAAGTT+AGG | + | chr6_4:54954169-54954188 | Msa0991230:intron | 50.0% | |
| GATGAGCCGAAAACCCGAAA+GGG | + | chr6_4:54954259-54954278 | Msa0991230:intron | 50.0% | |
| TTTGCATGAACCGCCCTTTC+GGG | - | chr6_4:54954275-54954294 | None:intergenic | 50.0% | |
| GGGCGGTTCATGCAAAAATG+AGG | + | chr6_4:54954279-54954298 | Msa0991230:intron | 50.0% | |
| TTACAAGCAGGTTACTCCCC+AGG | + | chr6_4:54954756-54954775 | Msa0991230:intron | 50.0% | |
| TTACTCCCCAGGATGATCTG+TGG | + | chr6_4:54954767-54954786 | Msa0991230:intron | 50.0% | |
| CCATTGACCACAGATCATCC+TGG | - | chr6_4:54954777-54954796 | None:intergenic | 50.0% | |
| CCAGGATGATCTGTGGTCAA+TGG | + | chr6_4:54954774-54954793 | Msa0991230:intron | 50.0% | |
| ! | TTTTGCCTAAGCCGCCCTTT+CGG | - | chr6_4:54954864-54954883 | None:intergenic | 50.0% |
| !! | TTCGGGTTTTCGATTCACCG+GGG | - | chr6_4:54954959-54954978 | None:intergenic | 50.0% |
| CGGTGAATCGAAAACCCGAA+AGG | + | chr6_4:54954959-54954978 | Msa0991230:intron | 50.0% | |
| GAATCGAAAACCCGAAAGGG+CGG | + | chr6_4:54954963-54954982 | Msa0991230:intron | 50.0% | |
| ! | TTTTGCCTGAACCGCCCTTT+CGG | - | chr6_4:54954977-54954996 | None:intergenic | 50.0% |
| AAGGGCGGTTCAGGCAAAAA+TGG | + | chr6_4:54954978-54954997 | Msa0991230:intron | 50.0% | |
| AGGGCGGTTCAGGCAAAAAT+GGG | + | chr6_4:54954979-54954998 | Msa0991230:intron | 50.0% | |
| ACATTGGGTGTTCGCATCTG+TGG | - | chr6_4:54955060-54955079 | None:intergenic | 50.0% | |
| TTGTTAGGCGTGTCAGTGCT+GGG | - | chr6_4:54955086-54955105 | None:intergenic | 50.0% | |
| !! | AGCACTGACACGCCTAACAA+CGG | + | chr6_4:54955086-54955105 | Msa0991230:intron | 50.0% |
| TGATACAGGTCGCCGTTGTT+AGG | - | chr6_4:54955101-54955120 | None:intergenic | 50.0% | |
| ACAACGGCGACCTGTATCAA+AGG | + | chr6_4:54955102-54955121 | Msa0991230:intron | 50.0% | |
| CGCATCAAAACCATGGCTGA+GGG | - | chr6_4:54955163-54955182 | None:intergenic | 50.0% | |
| ACGCATCAAAACCATGGCTG+AGG | - | chr6_4:54955164-54955183 | None:intergenic | 50.0% | |
| CTCGTGCTGAAGCATGTACA+TGG | - | chr6_4:54955218-54955237 | None:intergenic | 50.0% | |
| TTGCACCTACCTACACGATG+TGG | + | chr6_4:54956172-54956191 | Msa0991230:intron | 50.0% | |
| CATCACCACATCGTGTAGGT+AGG | - | chr6_4:54956180-54956199 | None:intergenic | 50.0% | |
| GGATCATCACCACATCGTGT+AGG | - | chr6_4:54956184-54956203 | None:intergenic | 50.0% | |
| CTTTGGATCGAACTTGCCGT+TGG | - | chr6_4:54956205-54956224 | None:intergenic | 50.0% | |
| TTTGGATCGAACACGCCGTT+TGG | - | chr6_4:54956264-54956283 | None:intergenic | 50.0% | |
| GATCGAACTTGGCACTTGAC+CGG | - | chr6_4:54956380-54956399 | None:intergenic | 50.0% | |
| TCGAACTAGCCACTTGACCA+AGG | - | chr6_4:54956439-54956458 | None:intergenic | 50.0% | |
| TGACAGGGTAGACAAACCAG+GGG | - | chr6_4:54956493-54956512 | None:intergenic | 50.0% | |
| CTGACAGGGTAGACAAACCA+GGG | - | chr6_4:54956494-54956513 | None:intergenic | 50.0% | |
| ACTGACAGGGTAGACAAACC+AGG | - | chr6_4:54956495-54956514 | None:intergenic | 50.0% | |
| GACTTCGTCTCTTGACTCTC+CGG | + | chr6_4:54956689-54956708 | Msa0991230:intron | 50.0% | |
| TGAGTCAGTTTAGCCCCTAG+GGG | + | chr6_4:54957015-54957034 | Msa0991230:intron | 50.0% | |
| !! | GAGTCGTTTTAGTCCCTAGG+GGG | + | chr6_4:54957175-54957194 | Msa0991230:intron | 50.0% |
| AATGACCAAAACGCCCCCTA+GGG | - | chr6_4:54957191-54957210 | None:intergenic | 50.0% | |
| AAATGACCAAAACGCCCCCT+AGG | - | chr6_4:54957192-54957211 | None:intergenic | 50.0% | |
| ! | GTTTGTTAGGGTGGAGGAAG+TGG | - | chr6_4:54957593-54957612 | None:intergenic | 50.0% |
| GGGTGGAGGAAGTTAGTTAG+AGG | - | chr6_4:54957636-54957655 | None:intergenic | 50.0% | |
| ! | GGGGTGGTTGAAGGTTAGTT+AGG | - | chr6_4:54957667-54957686 | None:intergenic | 50.0% |
| ! | AAGTTTATGGGCTGTGACGG+TGG | - | chr6_4:54957846-54957865 | None:intergenic | 50.0% |
| CCTCAACTCTGCTTCAGTTC+TGG | - | chr6_4:54957997-54958016 | None:intergenic | 50.0% | |
| CCAGAACTGAAGCAGAGTTG+AGG | + | chr6_4:54957994-54958013 | Msa0991230:intron | 50.0% | |
| AGAGTTGAGGATAGCTCCGA+GGG | + | chr6_4:54958007-54958026 | Msa0991230:intron | 50.0% | |
| !! | CGTTCGTTTTTCCTCTCCCT+CGG | - | chr6_4:54958026-54958045 | None:intergenic | 50.0% |
| AGCCGAATCCAGATTGAGCA+AGG | + | chr6_4:54958068-54958087 | Msa0991230:intron | 50.0% | |
| GAAGAAATAGGGACGGTGGT+TGG | - | chr6_4:54958351-54958370 | None:intergenic | 50.0% | |
| TTCTCCGTTCACCTGGTTTC+AGG | + | chr6_4:54958368-54958387 | Msa0991230:intron | 50.0% | |
| TCTCCGTTCACCTGGTTTCA+GGG | + | chr6_4:54958369-54958388 | Msa0991230:intron | 50.0% | |
| TCTCCCTGAAACCAGGTGAA+CGG | - | chr6_4:54958375-54958394 | None:intergenic | 50.0% | |
| !! | GGTGATGGGTCATGGATCAT+GGG | - | chr6_4:54958492-54958511 | None:intergenic | 50.0% |
| !! | CGAAAATGGGCTAGGGTGAT+GGG | - | chr6_4:54958506-54958525 | None:intergenic | 50.0% |
| !! | ACGAAAATGGGCTAGGGTGA+TGG | - | chr6_4:54958507-54958526 | None:intergenic | 50.0% |
| TGGAAATAGCAACACTGGGG+GGG | - | chr6_4:54958596-54958615 | None:intergenic | 50.0% | |
| GTGGAAATAGCAACACTGGG+GGG | - | chr6_4:54958597-54958616 | None:intergenic | 50.0% | |
| GGTGGAAATAGCAACACTGG+GGG | - | chr6_4:54958598-54958617 | None:intergenic | 50.0% | |
| GGGTGGAAATAGCAACACTG+GGG | - | chr6_4:54958599-54958618 | None:intergenic | 50.0% | |
| GGGGTGGAAATAGCAACACT+GGG | - | chr6_4:54958600-54958619 | None:intergenic | 50.0% | |
| AGGGGTGGAAATAGCAACAC+TGG | - | chr6_4:54958601-54958620 | None:intergenic | 50.0% | |
| !! | ACTTTTTGAGAGCACAGGGG+TGG | - | chr6_4:54958616-54958635 | None:intergenic | 50.0% |
| ! | GCATATGTCGGTGCTTGTGT+CGG | - | chr6_4:54959431-54959450 | None:intergenic | 50.0% |
| ATGAGAGAGAGAGGCCTCAA+GGG | - | chr6_4:54959732-54959751 | None:intergenic | 50.0% | |
| AATGAGAGAGAGAGGCCTCA+AGG | - | chr6_4:54959733-54959752 | None:intergenic | 50.0% | |
| GATCCCTTAAACGGGTACGT+AGG | + | chr6_4:54959833-54959852 | Msa0991230:intron | 50.0% | |
| CTTGCCTACGTACCCGTTTA+AGG | - | chr6_4:54959840-54959859 | None:intergenic | 50.0% | |
| CTTAAACGGGTACGTAGGCA+AGG | + | chr6_4:54959838-54959857 | Msa0991230:intron | 50.0% | |
| AGTGAAGAATGGGAGGGAGA+AGG | - | chr6_4:54959908-54959927 | None:intergenic | 50.0% | |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | - | chr6_4:54960039-54960058 | None:intergenic | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | - | chr6_4:54960046-54960065 | None:intergenic | 50.0% |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | - | chr6_4:54960051-54960070 | None:intergenic | 50.0% |
| AACCCTTGAGAATCGAGGTC+CGG | - | chr6_4:54960069-54960088 | None:intergenic | 50.0% | |
| GGCAAGTACTAGGAGCTTCA+AGG | + | chr6_4:54960301-54960320 | Msa0991230:intron | 50.0% | |
| TCTCCATACTCCGTGTCTCT+AGG | + | chr6_4:54960334-54960353 | Msa0991230:intron | 50.0% | |
| CTCCATACTCCGTGTCTCTA+GGG | + | chr6_4:54960335-54960354 | Msa0991230:intron | 50.0% | |
| TACCCTAGAGACACGGAGTA+TGG | - | chr6_4:54960340-54960359 | None:intergenic | 50.0% | |
| AGTTACTACCTCACTCAGGC+AGG | - | chr6_4:54960602-54960621 | None:intergenic | 50.0% | |
| TCCTTCTCTTCCCAGTGTGA+CGG | + | chr6_4:54961676-54961695 | Msa0991230:intron | 50.0% | |
| ACCTTCCTGTGGAATACGTC+CGG | + | chr6_4:54961699-54961718 | Msa0991230:intron | 50.0% | |
| TAAACGTCCAACACTCGACG+AGG | + | chr6_4:54961724-54961743 | Msa0991230:intron | 50.0% | |
| AAACGTCCAACACTCGACGA+GGG | + | chr6_4:54961725-54961744 | Msa0991230:intron | 50.0% | |
| !!! | GGCGGTGGTGAGTTTTAGAA+GGG | - | chr6_4:54962307-54962326 | None:intergenic | 50.0% |
| !!! | TGGCGGTGGTGAGTTTTAGA+AGG | - | chr6_4:54962308-54962327 | None:intergenic | 50.0% |
| ! | ATGGTGGCTGGAAGTGTGTT+TGG | - | chr6_4:54962328-54962347 | None:intergenic | 50.0% |
| AATGTTGAGGTCATGGTGGC+TGG | - | chr6_4:54962340-54962359 | None:intergenic | 50.0% | |
| GTCGAATGTTGAGGTCATGG+TGG | - | chr6_4:54962344-54962363 | None:intergenic | 50.0% | |
| GAGGTCGAATGTTGAGGTCA+TGG | - | chr6_4:54962347-54962366 | None:intergenic | 50.0% | |
| !! | CAAATGGAGGTCGTTTTGGC+CGG | - | chr6_4:54962488-54962507 | None:intergenic | 50.0% |
| CTCATGGGGAAGAAGATGGT+TGG | - | chr6_4:54962521-54962540 | None:intergenic | 50.0% | |
| CAACCATCTTCTTCCCCATG+AGG | + | chr6_4:54962519-54962538 | Msa0991230:intron | 50.0% | |
| TAGGCTAAAGCACGCTTCTC+CGG | - | chr6_4:54964174-54964193 | None:intergenic | 50.0% | |
| ! | CACATGGAAGTGCATACCTG+TGG | - | chr6_4:54964545-54964564 | None:intergenic | 50.0% |
| GATCTTCAAGAGGAGGGTCA+TGG | + | chr6_4:54964570-54964589 | Msa0991230:CDS | 50.0% | |
| TCCGGCCCTTCATTGATCAG+TGG | - | chr6_4:54952201-54952220 | None:intergenic | 55.0% | |
| GCCGGACCCCAATAGCAAAT+GGG | + | chr6_4:54952215-54952234 | Msa0991230:CDS | 55.0% | |
| !! | CCCCATTTGCTATTGGGGTC+CGG | - | chr6_4:54952219-54952238 | None:intergenic | 55.0% |
| CCGGACCCCAATAGCAAATG+GGG | + | chr6_4:54952216-54952235 | Msa0991230:CDS | 55.0% | |
| CGTCTTGCATAGTCACGGCA+AGG | - | chr6_4:54952501-54952520 | None:intergenic | 55.0% | |
| TGAGCTGCACCATATCCCTC+GGG | + | chr6_4:54952545-54952564 | Msa0991230:CDS | 55.0% | |
| !! | TCTCTGTTGGAAGCACCAGG+TGG | - | chr6_4:54952783-54952802 | None:intergenic | 55.0% |
| !! | ACCTTTGGGACCCATGCTTC+GGG | + | chr6_4:54952942-54952961 | Msa0991230:intron | 55.0% |
| CCCCATGGCCTTTCTCTATG+TGG | + | chr6_4:54953114-54953133 | Msa0991230:intron | 55.0% | |
| CCCCACATAGAGAAAGGCCA+TGG | - | chr6_4:54953119-54953138 | None:intergenic | 55.0% | |
| GGAAGCAGCTTCAACCCACT+TGG | - | chr6_4:54953219-54953238 | None:intergenic | 55.0% | |
| CTACAGTGCGCAGTTCAACC+GGG | + | chr6_4:54953632-54953651 | Msa0991230:intron | 55.0% | |
| TACAGTGCGCAGTTCAACCG+GGG | + | chr6_4:54953633-54953652 | Msa0991230:intron | 55.0% | |
| CGGGGCAACTCCTTTCTCTT+TGG | + | chr6_4:54953651-54953670 | Msa0991230:intron | 55.0% | |
| ! | AGCAGTTCTCCCTCTGGAAG+TGG | + | chr6_4:54953687-54953706 | Msa0991230:intron | 55.0% |
| AGTCAACAACCCGACCCAAG+GGG | + | chr6_4:54953922-54953941 | Msa0991230:intron | 55.0% | |
| TAGGTGTCCACTTGCCCCTT+GGG | - | chr6_4:54953939-54953958 | None:intergenic | 55.0% | |
| TTAGGTGTCCACTTGCCCCT+TGG | - | chr6_4:54953940-54953959 | None:intergenic | 55.0% | |
| AGGTCGAAAACCCGAAAGGG+CGG | + | chr6_4:54954104-54954123 | Msa0991230:intron | 55.0% | |
| ! | TTTTGCCTAGGCCGCCCTTT+CGG | - | chr6_4:54954118-54954137 | None:intergenic | 55.0% |
| !! | CGGGAAGCGCATTTTTGCCT+AGG | - | chr6_4:54954130-54954149 | None:intergenic | 55.0% |
| !! | TTCGGGTTTTCGGCTCATCG+AGG | - | chr6_4:54954258-54954277 | None:intergenic | 55.0% |
| CGATGAGCCGAAAACCCGAA+AGG | + | chr6_4:54954258-54954277 | Msa0991230:intron | 55.0% | |
| !!! | GAACCGCCCTTTCGGGTTTT+CGG | - | chr6_4:54954268-54954287 | None:intergenic | 55.0% |
| GCAAGTCACCATCACCCCTT+GGG | + | chr6_4:54954329-54954348 | Msa0991230:intron | 55.0% | |
| CAAGTCACCATCACCCCTTG+GGG | + | chr6_4:54954330-54954349 | Msa0991230:intron | 55.0% | |
| AAAACCCGAAAGGGCGGCTT+AGG | + | chr6_4:54954856-54954875 | Msa0991230:intron | 55.0% | |
| TTTGCCTAAGCCGCCCTTTC+GGG | - | chr6_4:54954863-54954882 | None:intergenic | 55.0% | |
| AAAACCCGAAAGGGCGGTTC+AGG | + | chr6_4:54954268-54954287 | Msa0991230:intron | 55.0% | |
| TTTGCCTGAACCGCCCTTTC+GGG | - | chr6_4:54954976-54954995 | None:intergenic | 55.0% | |
| GTTGTTAGGCGTGTCAGTGC+TGG | - | chr6_4:54955087-54955106 | None:intergenic | 55.0% | |
| CAACGACGGTCTCTCCAAAG+AGG | + | chr6_4:54955188-54955207 | Msa0991230:intron | 55.0% | |
| CTGGAAGATTGGGCACGTAG+TGG | - | chr6_4:54955241-54955260 | None:intergenic | 55.0% | |
| GATCCAGGTGGACACTGACA+GGG | - | chr6_4:54956508-54956527 | None:intergenic | 55.0% | |
| TGTCATGTCACTGGGGATCC+AGG | - | chr6_4:54956523-54956542 | None:intergenic | 55.0% | |
| !!! | TTAGTCCCTAGGGGGCGTTT+TGG | + | chr6_4:54957183-54957202 | Msa0991230:intron | 55.0% |
| TGTTAGGGTGGAGGAAGTGG+TGG | - | chr6_4:54957590-54957609 | None:intergenic | 55.0% | |
| ! | GTTAGGGTGGTTTAGGGTGG+AGG | - | chr6_4:54957650-54957669 | None:intergenic | 55.0% |
| !! | GCGGTGTTGTGATCGAACCA+AGG | - | chr6_4:54957815-54957834 | None:intergenic | 55.0% |
| TGTGACGGTGGTGATTACGG+CGG | - | chr6_4:54957834-54957853 | None:intergenic | 55.0% | |
| GGCTGTGACGGTGGTGATTA+CGG | - | chr6_4:54957837-54957856 | None:intergenic | 55.0% | |
| ! | GGCTTTGTGCTACGCTTGCA+AGG | - | chr6_4:54957938-54957957 | None:intergenic | 55.0% |
| CAGAGTTGAGGATAGCTCCG+AGG | + | chr6_4:54958006-54958025 | Msa0991230:intron | 55.0% | |
| CCGTCTCCCTCTCCTCTATT+CGG | - | chr6_4:54958239-54958258 | None:intergenic | 55.0% | |
| CCGAATAGAGGAGAGGGAGA+CGG | + | chr6_4:54958236-54958255 | Msa0991230:intron | 55.0% | |
| AGAAAAAAACTCCGGCGCGG+CGG | + | chr6_4:54958294-54958313 | Msa0991230:intron | 55.0% | |
| CGGAGAAGAAATAGGGACGG+TGG | - | chr6_4:54958355-54958374 | None:intergenic | 55.0% | |
| CTCTCTCTCTCCCTGAAACC+AGG | - | chr6_4:54958382-54958401 | None:intergenic | 55.0% | |
| !! | GGGTGATGGGTCATGGATCA+TGG | - | chr6_4:54958493-54958512 | None:intergenic | 55.0% |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | - | chr6_4:54960050-54960069 | None:intergenic | 55.0% |
| CCCGTAGCGAAAACAACTCC+CGG | + | chr6_4:54960047-54960066 | Msa0991230:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | + | chr6_4:54960064-54960083 | Msa0991230:intron | 55.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | - | chr6_4:54960068-54960087 | None:intergenic | 55.0% | |
| GGTGAATACCTGCCTGAGTG+AGG | + | chr6_4:54960591-54960610 | Msa0991230:intron | 55.0% | |
| TCCGTCACACTGGGAAGAGA+AGG | - | chr6_4:54961680-54961699 | None:intergenic | 55.0% | |
| ACAGGAAGGTCCGTCACACT+GGG | - | chr6_4:54961689-54961708 | None:intergenic | 55.0% | |
| ACCGGACGTATTCCACAGGA+AGG | - | chr6_4:54961703-54961722 | None:intergenic | 55.0% | |
| AACGTCCAACACTCGACGAG+GGG | + | chr6_4:54961726-54961745 | Msa0991230:intron | 55.0% | |
| ! | GTGGCTGGAAGTGTGTTTGG+CGG | - | chr6_4:54962325-54962344 | None:intergenic | 55.0% |
| !! | TTAGTGGGCTGTGCAGAGGA+AGG | - | chr6_4:54962407-54962426 | None:intergenic | 55.0% |
| ! | CCATGCGTACTTTTCCGGCA+CGG | - | chr6_4:54962623-54962642 | None:intergenic | 55.0% |
| !! | GCTGCTTTGCTGGCTCTGTT+TGG | + | chr6_4:54963394-54963413 | Msa0991230:intron | 55.0% |
| GGCCGGACCCCAATAGCAAA+TGG | + | chr6_4:54952214-54952233 | Msa0991230:CDS | 60.0% | |
| ACCCGAAGCATGGGTCCCAA+AGG | - | chr6_4:54952946-54952965 | None:intergenic | 60.0% | |
| TGTCCACTTGCCCCTTGGGT+CGG | - | chr6_4:54953935-54953954 | None:intergenic | 60.0% | |
| AAAACCCGAAAGGGCGGCCT+AGG | + | chr6_4:54954110-54954129 | Msa0991230:intron | 60.0% | |
| TTTGCCTAGGCCGCCCTTTC+GGG | - | chr6_4:54954117-54954136 | None:intergenic | 60.0% | |
| GAGCCGAAAACCCGAAAGGG+CGG | + | chr6_4:54954262-54954281 | Msa0991230:intron | 60.0% | |
| GGCAAGTCACCATCACCCCT+TGG | + | chr6_4:54954328-54954347 | Msa0991230:intron | 60.0% | |
| ACAGTTGCAGGTGCCCCAAG+GGG | - | chr6_4:54954346-54954365 | None:intergenic | 60.0% | |
| GACAGTTGCAGGTGCCCCAA+GGG | - | chr6_4:54954347-54954366 | None:intergenic | 60.0% | |
| TGACAGTTGCAGGTGCCCCA+AGG | - | chr6_4:54954348-54954367 | None:intergenic | 60.0% | |
| CTACCCTGTCAGTGTCCACC+TGG | + | chr6_4:54956502-54956521 | Msa0991230:intron | 60.0% | |
| GGATCCAGGTGGACACTGAC+AGG | - | chr6_4:54956509-54956528 | None:intergenic | 60.0% | |
| CATGTCACTGGGGATCCAGG+TGG | - | chr6_4:54956520-54956539 | None:intergenic | 60.0% | |
| TAGGGTGGAGGAAGTGGTGG+AGG | - | chr6_4:54957587-54957606 | None:intergenic | 60.0% | |
| TGAGGATAGCTCCGAGGGAG+AGG | + | chr6_4:54958012-54958031 | Msa0991230:intron | 60.0% | |
| !! | TGGGCTAGGGTGATGGGTCA+TGG | - | chr6_4:54958500-54958519 | None:intergenic | 60.0% |
| CTCCCGGACCTCGATTCTCA+AGG | + | chr6_4:54960063-54960082 | Msa0991230:intron | 60.0% | |
| CACAGGAAGGTCCGTCACAC+TGG | - | chr6_4:54961690-54961709 | None:intergenic | 60.0% | |
| !! | CAGTGTGACGGACCTTCCTG+TGG | + | chr6_4:54961688-54961707 | Msa0991230:intron | 60.0% |
| ! | GCTGGAAGTGTGTTTGGCGG+TGG | - | chr6_4:54962322-54962341 | None:intergenic | 60.0% |
| TTTATCGACGGCCACCACGC+CGG | + | chr6_4:54962585-54962604 | Msa0991230:intron | 60.0% | |
| ! | TGCGTACTTTTCCGGCACGG+CGG | - | chr6_4:54962620-54962639 | None:intergenic | 60.0% |
| ! | CCGTGCCGGAAAAGTACGCA+TGG | + | chr6_4:54962620-54962639 | Msa0991230:intron | 60.0% |
| AACCCGACCCAAGGGGCAAG+TGG | + | chr6_4:54953929-54953948 | Msa0991230:intron | 65.0% | |
| GTCCACTTGCCCCTTGGGTC+GGG | - | chr6_4:54953934-54953953 | None:intergenic | 65.0% | |
| ! | GACGGTGGTTGGAGCACCTC+CGG | - | chr6_4:54958340-54958359 | None:intergenic | 65.0% |
| GTCCAACACTCGACGAGGGG+AGG | + | chr6_4:54961729-54961748 | Msa0991230:intron | 65.0% | |
| CACCTCCCCTCGTCGAGTGT+TGG | - | chr6_4:54961734-54961753 | None:intergenic | 65.0% | |
| GGGCTGTGCAGAGGAAGGAG+AGG | - | chr6_4:54962402-54962421 | None:intergenic | 65.0% | |
| GGAGATGAACTCCGGCGTGG+TGG | - | chr6_4:54962599-54962618 | None:intergenic | 65.0% | |
| GGCACGGCGGAGATGAACTC+CGG | - | chr6_4:54962607-54962626 | None:intergenic | 65.0% | |
| GGAGTTCATCTCCGCCGTGC+CGG | + | chr6_4:54962606-54962625 | Msa0991230:intron | 65.0% | |
| GCAGGTGCCCCAAGGGGTGA+TGG | - | chr6_4:54954340-54954359 | None:intergenic | 70.0% | |
| ! | TGGTTGGAGCACCTCCGGCG+CGG | - | chr6_4:54958335-54958354 | None:intergenic | 70.0% |
| GGCGGAGATGAACTCCGGCG+TGG | - | chr6_4:54962602-54962621 | None:intergenic | 70.0% | |
| AGCACCTCCGGCGCGGTGGT+CGG | - | chr6_4:54958328-54958347 | None:intergenic | 75.0% | |
| ! | TTGGAGCACCTCCGGCGCGG+TGG | - | chr6_4:54958332-54958351 | None:intergenic | 75.0% |
| ! | ACTCCGGCGCGGCGGCTCTC+CGG | + | chr6_4:54958302-54958321 | Msa0991230:intron | 80.0% |
| ! | TCTCCGGCCGACCACCGCGC+CGG | + | chr6_4:54958318-54958337 | Msa0991230:intron | 80.0% |
| ! | CCTCCGGCGCGGTGGTCGGC+CGG | - | chr6_4:54958324-54958343 | None:intergenic | 85.0% |
| ! | CGGCCGGAGAGCCGCCGCGC+CGG | - | chr6_4:54958308-54958327 | None:intergenic | 90.0% |
| ! | CCGGCCGACCACCGCGCCGG+AGG | + | chr6_4:54958321-54958340 | Msa0991230:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 54951880 | 54964629 | 54951880 | ID=Msa0991230;Name=Msa0991230 |
| chr6_4 | mRNA | 54951880 | 54964629 | 54951880 | ID=Msa0991230-mRNA-1;Parent=Msa0991230;Name=Msa0991230-mRNA-1;_AED=0.88;_eAED=0.88;_QI=0|0|0|0.5|1|1|2|0|313 |
| chr6_4 | exon | 54951880 | 54952739 | 54951880 | ID=Msa0991230-mRNA-1:exon:11243;Parent=Msa0991230-mRNA-1 |
| chr6_4 | exon | 54964548 | 54964629 | 54964548 | ID=Msa0991230-mRNA-1:exon:11244;Parent=Msa0991230-mRNA-1 |
| chr6_4 | CDS | 54951880 | 54952739 | 54951880 | ID=Msa0991230-mRNA-1:cds;Parent=Msa0991230-mRNA-1 |
| chr6_4 | CDS | 54964548 | 54964629 | 54964548 | ID=Msa0991230-mRNA-1:cds;Parent=Msa0991230-mRNA-1 |
| Gene Sequence |
| Protein sequence |