AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1096580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096580 MtrunA17_Chr4g0076611 89.828 698 70 1 72 768 1 698 0.0 1297
Msa1096580 MtrunA17_Chr3g0120521 60.776 747 283 7 27 766 29 772 0.0 947
Msa1096580 MtrunA17_Chr4g0057531 55.232 755 324 9 20 763 25 776 0.0 841
Msa1096580 MtrunA17_Chr4g0057471 55.289 709 300 8 66 763 6 708 0.0 779
Msa1096580 MtrunA17_Chr4g0057481 54.559 691 293 9 86 763 7 689 0.0 743
Msa1096580 MtrunA17_Chr7g0250481 50.000 778 340 16 26 763 29 797 0.0 723
Msa1096580 MtrunA17_Chr7g0250391 51.272 786 341 19 7 763 10 782 0.0 701
Msa1096580 MtrunA17_Chr7g0250411 50.129 776 351 17 14 763 18 783 0.0 695
Msa1096580 MtrunA17_Chr7g0250371 49.419 775 359 16 14 763 18 784 0.0 690
Msa1096580 MtrunA17_Chr4g0057511 54.823 622 258 10 156 763 3 615 0.0 670
Msa1096580 MtrunA17_Chr4g0057491 53.907 627 266 9 152 763 3 621 0.0 660
Msa1096580 MtrunA17_Chr7g0250331 49.372 796 330 23 24 763 28 806 0.0 659
Msa1096580 MtrunA17_Chr4g0057461 53.686 624 266 10 152 757 3 621 0.0 656
Msa1096580 MtrunA17_Chr5g0423261 53.195 626 274 8 151 763 2 621 0.0 656
Msa1096580 MtrunA17_Chr7g0261691 94.260 331 19 0 152 482 17 347 0.0 642
Msa1096580 MtrunA17_Chr4g0053781 43.750 768 391 16 11 763 13 754 0.0 599
Msa1096580 MtrunA17_Chr1g0204321 41.252 783 413 15 7 763 15 776 0.0 584
Msa1096580 MtrunA17_Chr4g0037221 43.315 718 368 14 72 763 63 767 0.0 582
Msa1096580 MtrunA17_Chr2g0300751 42.490 779 404 14 11 761 8 770 0.0 582
Msa1096580 MtrunA17_Chr2g0285121 41.473 774 411 17 21 763 20 782 0.0 576
Msa1096580 MtrunA17_Chr4g0026641 42.912 776 408 17 4 766 3 756 0.0 575
Msa1096580 MtrunA17_Chr5g0407701 41.927 768 405 16 8 763 11 749 0.0 573
Msa1096580 MtrunA17_Chr5g0401511 43.759 729 373 16 51 761 49 758 0.0 573
Msa1096580 MtrunA17_Chr7g0261701 93.537 294 19 0 475 768 1 294 0.0 570
Msa1096580 MtrunA17_Chr1g0152771 40.769 780 414 15 5 761 6 760 0.0 567
Msa1096580 MtrunA17_Chr2g0285111 41.634 759 404 16 37 763 34 785 0.0 564
Msa1096580 MtrunA17_Chr7g0262161 40.951 757 404 14 28 763 26 760 0.0 563
Msa1096580 MtrunA17_Chr8g0369891 41.200 750 398 16 27 763 33 752 0.0 561
Msa1096580 MtrunA17_Chr4g0020651 43.113 726 377 15 54 761 47 754 0.0 559
Msa1096580 MtrunA17_Chr8g0377961 40.897 780 407 22 12 767 29 778 0.0 548
Msa1096580 MtrunA17_Chr8g0354771 41.029 758 412 16 25 763 22 763 0.0 544
Msa1096580 MtrunA17_Chr8g0344331 43.036 718 361 16 72 761 75 772 0.0 541
Msa1096580 MtrunA17_Chr4g0070391 40.868 783 400 20 3 761 6 749 0.0 540
Msa1096580 MtrunA17_Chr5g0439271 48.667 600 279 9 187 763 8 601 0.0 533
Msa1096580 MtrunA17_Chr3g0136151 41.299 770 392 19 21 763 25 761 1.88e-179 532
Msa1096580 MtrunA17_Chr3g0134621 39.793 774 394 15 7 761 13 733 4.14e-175 520
Msa1096580 MtrunA17_Chr8g0351011 39.680 751 398 19 26 763 43 751 1.57e-174 520
Msa1096580 MtrunA17_Chr7g0246451 38.852 749 406 14 26 763 38 745 1.30e-172 514
Msa1096580 MtrunA17_Chr7g0246461 38.422 786 403 18 8 763 5 739 1.36e-172 514
Msa1096580 MtrunA17_Chr7g0266051 41.379 725 374 17 54 763 17 705 2.35e-170 507
Msa1096580 MtrunA17_Chr3g0143251 38.987 790 416 18 7 763 8 764 2.08e-169 507
Msa1096580 MtrunA17_Chr8g0344971 39.431 738 403 16 50 763 42 759 1.60e-168 504
Msa1096580 MtrunA17_Chr8g0334521 37.741 779 400 17 7 763 18 733 2.93e-166 498
Msa1096580 MtrunA17_Chr1g0170081 37.676 783 402 20 7 763 8 730 1.49e-163 491
Msa1096580 MtrunA17_Chr4g0057061 39.553 761 416 20 14 763 47 774 7.37e-163 490
Msa1096580 MtrunA17_Chr7g0227991 38.432 778 406 19 7 763 8 733 1.53e-162 488
Msa1096580 MtrunA17_Chr1g0146271 37.597 774 417 19 7 763 8 732 9.30e-161 483
Msa1096580 MtrunA17_Chr1g0146251 38.089 785 400 20 7 763 8 734 4.18e-158 477
Msa1096580 MtrunA17_Chr6g0470881 38.875 782 402 22 4 763 2 729 5.48e-157 473
Msa1096580 MtrunA17_Chr6g0470851 38.531 776 404 22 7 763 8 729 1.03e-156 473
Msa1096580 MtrunA17_Chr5g0398241 37.483 747 419 13 28 763 44 753 1.76e-154 468
Msa1096580 MtrunA17_Chr8g0345981 37.992 787 434 17 1 763 1 757 1.42e-153 466
Msa1096580 MtrunA17_Chr5g0398401 36.948 747 423 13 28 763 44 753 2.72e-151 459
Msa1096580 MtrunA17_Chr8g0345971 36.869 792 419 17 8 764 14 759 9.13e-151 458
Msa1096580 MtrunA17_Chr8g0354741 41.315 639 328 16 146 763 21 633 1.69e-150 454
Msa1096580 MtrunA17_Chr3g0079971 37.074 793 396 22 8 763 5 731 4.40e-149 453
Msa1096580 MtrunA17_Chr1g0189251 36.213 787 432 16 8 767 14 757 1.52e-148 452
Msa1096580 MtrunA17_Chr7g0248871 36.420 810 409 26 7 764 9 764 1.67e-148 453
Msa1096580 MtrunA17_Chr8g0334491 37.221 763 401 20 19 763 25 727 1.02e-146 447
Msa1096580 MtrunA17_Chr8g0345991 39.522 711 385 15 72 763 69 753 4.13e-146 446
Msa1096580 MtrunA17_Chr1g0189561 36.556 755 402 21 49 764 45 761 2.80e-145 444
Msa1096580 MtrunA17_Chr8g0376841 40.830 578 299 13 26 593 39 583 2.15e-142 431
Msa1096580 MtrunA17_Chr5g0398351 36.765 748 423 13 28 763 795 1504 3.60e-142 454
Msa1096580 MtrunA17_Chr5g0398351 36.948 747 422 12 28 763 25 733 3.81e-140 449
Msa1096580 MtrunA17_Chr5g0447171 45.882 510 217 8 304 763 7 507 1.92e-141 426
Msa1096580 MtrunA17_Chr8g0345961 38.658 745 399 19 49 763 40 756 4.25e-140 431
Msa1096580 MtrunA17_Chr2g0303881 38.997 718 385 15 72 766 41 728 5.01e-140 430
Msa1096580 MtrunA17_Chr5g0398331 37.199 707 399 13 69 763 77 750 6.72e-140 430
Msa1096580 MtrunA17_Chr5g0398311 37.344 723 401 16 54 763 63 746 2.91e-139 428
Msa1096580 MtrunA17_Chr7g0250461 48.614 469 220 9 14 470 18 477 3.79e-137 414
Msa1096580 MtrunA17_Chr7g0276151 38.202 712 387 17 72 763 77 755 5.26e-134 415
Msa1096580 MtrunA17_Chr7g0248861 36.239 654 344 20 22 640 23 638 3.89e-114 365
Msa1096580 MtrunA17_Chr7g0248861 47.699 239 115 5 134 369 628 859 1.70e-56 208
Msa1096580 MtrunA17_Chr2g0301011 37.634 558 262 15 101 654 4 479 3.66e-106 334
Msa1096580 MtrunA17_Chr3g0103061 60.465 258 96 3 8 264 8 260 7.47e-102 314
Msa1096580 MtrunA17_Chr4g0071871 33.291 796 455 24 30 765 36 815 4.05e-101 330
Msa1096580 MtrunA17_Chr3g0143241 39.554 493 253 13 7 482 8 472 1.55e-100 321
Msa1096580 MtrunA17_Chr2g0298601 31.713 823 479 28 9 765 10 815 4.51e-95 314
Msa1096580 MtrunA17_Chr7g0250441 58.007 281 109 8 491 763 3 282 3.31e-89 283
Msa1096580 MtrunA17_Chr2g0302951 31.975 785 442 28 43 763 82 838 5.31e-87 293
Msa1096580 MtrunA17_Chr6g0480721 47.095 327 149 6 72 393 5 312 1.50e-86 286
Msa1096580 MtrunA17_Chr6g0480721 38.567 293 162 6 479 763 317 599 2.38e-52 192
Msa1096580 MtrunA17_Chr3g0103071 47.653 277 143 2 278 552 1 277 1.90e-86 275
Msa1096580 MtrunA17_Chr8g0380961 31.974 760 416 28 73 763 118 845 1.76e-84 286
Msa1096580 MtrunA17_Chr4g0075331 30.000 760 455 28 57 763 2 737 4.26e-74 255
Msa1096580 MtrunA17_Chr4g0035881 37.634 372 168 8 226 591 4 317 9.72e-72 237
Msa1096580 MtrunA17_Chr4g0026651 41.956 317 137 8 86 368 1 304 2.48e-68 228
Msa1096580 MtrunA17_Chr3g0105461 39.788 377 158 9 5 368 2 322 3.06e-66 223
Msa1096580 MtrunA17_Chr8g0346361 41.840 337 161 9 442 763 180 496 1.03e-65 226
Msa1096580 MtrunA17_Chr8g0346361 43.256 215 102 5 165 378 4 199 7.51e-49 180
Msa1096580 MtrunA17_Chr3g0097061 38.820 322 169 7 101 420 4 299 2.17e-64 221
Msa1096580 MtrunA17_Chr3g0097061 49.123 114 51 1 550 663 330 436 9.42e-27 114
Msa1096580 MtrunA17_Chr2g0301031 46.850 254 118 8 519 763 1 246 1.88e-61 207
Msa1096580 MtrunA17_Chr3g0105451 40.206 291 149 7 485 763 1 278 6.01e-60 204
Msa1096580 MtrunA17_Chr2g0312861 44.269 253 126 6 519 763 1 246 1.61e-58 201
Msa1096580 MtrunA17_Chr2g0301911 37.158 366 187 13 165 522 30 360 5.96e-58 202
Msa1096580 MtrunA17_Chr4g0026661 42.913 254 138 5 519 767 12 263 1.71e-57 197
Msa1096580 MtrunA17_Chr5g0439281 50.521 192 86 3 6 189 7 197 1.71e-56 191
Msa1096580 MtrunA17_Chr7g0261681 98.765 81 1 0 72 152 1 81 8.12e-50 170
Msa1096580 MtrunA17_Chr2g0301921 44.131 213 102 7 560 763 1 205 8.32e-46 162
Msa1096580 MtrunA17_Chr2g0312841 43.750 192 89 4 165 355 9 182 1.40e-44 158
Msa1096580 MtrunA17_Chr5g0447151 50.345 145 72 0 9 153 11 155 3.07e-44 156
Msa1096580 MtrunA17_Chr4g0057501 54.762 126 56 1 28 153 6 130 2.20e-40 144
Msa1096580 MtrunA17_Chr3g0103081 47.887 142 70 3 626 763 1 142 4.14e-38 139
Msa1096580 MtrunA17_Chr5g0436021 41.618 173 83 3 188 357 31 188 6.85e-35 131
Msa1096580 MtrunA17_Chr4g0071191 34.632 231 129 5 474 694 32 250 1.15e-32 127
Msa1096580 MtrunA17_Chr3g0142981 46.497 157 51 2 212 365 45 171 1.34e-30 119
Msa1096580 MtrunA17_Chr2g0301021 25.159 473 217 17 27 488 35 381 4.11e-28 117
Msa1096580 MtrunA17_Chr5g0418921 48.837 129 64 1 493 619 6 134 5.07e-28 111
Msa1096580 MtrunA17_Chr4g0057521 58.140 86 35 1 66 151 13 97 6.36e-27 107
Msa1096580 MtrunA17_Chr3g0143021 44.144 111 57 1 69 179 4 109 9.61e-26 102
Msa1096580 MtrunA17_Chr4g0035871 40.580 138 77 2 52 187 16 150 2.12e-23 97.1
Msa1096580 MtrunA17_Chr5g0436031 36.970 165 91 5 609 763 19 180 5.66e-23 98.2
Msa1096580 MtrunA17_Chr8g0376851 31.515 165 103 4 609 763 7 171 1.22e-22 95.9
Msa1096580 MtrunA17_Chr3g0143231 55.056 89 39 1 503 591 2 89 5.29e-22 90.9
Msa1096580 MtrunA17_Chr3g0142971 51.765 85 40 1 503 587 2 85 7.31e-19 82.0
Msa1096580 MtrunA17_Chr5g0398341 44.330 97 54 0 560 656 1 97 9.98e-19 82.0
Msa1096580 MtrunA17_Chr3g0142961 35.075 134 76 4 601 723 4 137 9.45e-17 77.8
Msa1096580 MtrunA17_Chr7g0248851 35.333 150 83 7 626 764 1 147 2.04e-16 77.0
Msa1096580 MtrunA17_Chr8g0346351 29.936 157 96 2 9 165 17 159 3.12e-16 77.0
Msa1096580 MtrunA17_Chr8g0354731 33.846 130 79 3 22 151 47 169 5.83e-15 73.6
Msa1096580 MtrunA17_Chr5g0434941 51.351 74 32 2 283 352 1 74 1.23e-14 69.7
Msa1096580 MtrunA17_Chr3g0077671 47.561 82 41 2 541 620 227 308 2.79e-14 74.7
Msa1096580 MtrunA17_Chr3g0143011 49.180 61 31 0 316 376 1 61 1.02e-11 60.8
Msa1096580 MtrunA17_Chr3g0143221 30.357 168 103 6 601 763 4 162 1.76e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1096580 AT5G59810.1 62.019 753 274 5 16 763 29 774 0.0 961
Msa1096580 AT2G04160.1 56.931 743 310 6 28 763 31 770 0.0 875
Msa1096580 AT5G67360.1 44.502 773 392 15 3 763 7 754 0.0 627
Msa1096580 AT5G45650.2 41.485 781 408 14 21 763 19 788 0.0 578
Msa1096580 AT5G45650.1 41.485 781 408 14 21 763 19 788 0.0 578
Msa1096580 AT4G34980.1 40.816 784 414 16 3 763 2 758 0.0 575
Msa1096580 AT3G14240.1 41.486 740 397 14 50 763 40 769 0.0 564
Msa1096580 AT5G51750.1 39.644 787 427 14 5 763 8 774 0.0 558
Msa1096580 AT2G05920.1 41.956 777 380 20 10 761 17 747 0.0 556
Msa1096580 AT1G04110.1 40.769 780 422 15 9 763 6 770 0.0 552
Msa1096580 AT3G14067.1 41.013 790 401 21 8 763 9 767 0.0 543
Msa1096580 AT4G10520.1 41.634 771 402 19 7 763 8 744 0.0 542
Msa1096580 AT5G03620.1 39.649 797 404 18 1 761 1 756 0.0 538
Msa1096580 AT1G20160.2 42.076 713 374 14 72 763 28 722 5.90e-177 525
Msa1096580 AT1G20160.1 40.281 782 412 17 7 763 10 761 6.34e-177 526
Msa1096580 AT4G10540.1 40.177 789 420 20 1 763 1 763 6.25e-174 519
Msa1096580 AT4G00230.1 40.721 749 393 16 26 763 35 743 1.47e-172 514
Msa1096580 AT5G59090.2 42.119 755 353 20 29 763 33 723 4.42e-171 510
Msa1096580 AT4G10550.1 39.286 784 420 21 7 763 12 766 1.77e-169 508
Msa1096580 AT5G59090.1 42.063 756 357 21 29 763 33 728 2.41e-169 506
Msa1096580 AT5G59120.1 42.292 759 357 23 26 763 29 727 4.34e-169 505
Msa1096580 AT4G10550.3 39.327 773 414 20 17 763 39 782 9.00e-169 506
Msa1096580 AT5G59090.3 42.063 756 355 22 29 763 33 726 4.83e-168 503
Msa1096580 AT4G21650.1 39.062 768 390 18 27 763 40 760 5.86e-167 501
Msa1096580 AT1G66210.1 38.846 780 419 21 3 763 10 750 1.98e-166 499
Msa1096580 AT4G10530.1 39.544 789 393 24 4 763 2 735 6.58e-166 497
Msa1096580 AT4G21630.1 39.322 796 393 23 8 763 8 753 8.19e-165 495
Msa1096580 AT1G66220.1 36.835 790 414 18 4 763 10 744 2.01e-164 494
Msa1096580 AT4G10510.3 39.187 763 418 17 22 763 28 765 2.32e-164 494
Msa1096580 AT1G20150.1 38.570 783 406 19 20 763 24 770 7.03e-164 493
Msa1096580 AT4G10510.1 39.108 762 418 17 23 763 17 753 8.41e-164 493
Msa1096580 AT1G32940.1 40.053 754 416 15 27 763 28 762 3.25e-163 491
Msa1096580 AT5G58840.1 40.026 772 368 20 8 763 14 706 7.25e-163 488
Msa1096580 AT5G59100.1 40.849 754 382 21 26 763 32 737 9.45e-162 486
Msa1096580 AT4G10550.4 39.563 733 394 19 57 763 1 710 3.21e-161 484
Msa1096580 AT4G10550.2 39.563 733 394 19 57 763 1 710 3.21e-161 484
Msa1096580 AT5G58820.1 40.572 769 366 21 12 763 6 700 1.80e-160 482
Msa1096580 AT1G32960.1 38.845 762 424 18 22 763 26 765 3.43e-160 484
Msa1096580 AT3G46850.1 38.961 770 413 18 7 763 9 734 3.46e-160 482
Msa1096580 AT5G11940.1 39.119 772 380 21 27 763 36 752 3.94e-160 483
Msa1096580 AT3G46840.1 40.052 774 398 20 7 763 10 734 2.74e-159 480
Msa1096580 AT1G01900.1 39.832 713 388 15 72 763 79 771 7.85e-159 480
Msa1096580 AT4G10510.4 39.423 728 401 16 57 763 1 709 3.44e-158 477
Msa1096580 AT5G58830.1 38.680 773 377 19 8 763 13 705 4.05e-158 476
Msa1096580 AT1G32950.1 38.531 776 436 15 7 763 8 761 5.49e-158 478
Msa1096580 AT5G59130.4 38.411 768 406 19 7 763 14 725 2.70e-157 475
Msa1096580 AT1G32940.4 40.193 724 403 14 57 763 1 711 3.13e-157 474
Msa1096580 AT1G32940.2 40.193 724 403 14 57 763 1 711 3.13e-157 474
Msa1096580 AT5G59190.1 41.033 697 342 20 54 734 15 658 4.89e-156 470
Msa1096580 AT5G59130.1 38.411 768 402 20 7 763 14 721 1.89e-155 470
Msa1096580 AT4G26330.2 39.256 726 398 16 64 763 13 721 1.94e-155 470
Msa1096580 AT4G10510.2 39.411 713 392 16 72 763 1 694 1.38e-154 467
Msa1096580 AT5G59130.3 39.058 722 380 17 53 763 14 686 3.31e-154 466
Msa1096580 AT5G03620.2 42.384 604 306 10 1 591 1 575 6.36e-154 461
Msa1096580 AT5G59130.2 37.891 768 400 19 7 763 14 715 3.96e-152 461
Msa1096580 AT4G26330.1 38.514 740 398 17 64 763 13 735 2.78e-151 459
Msa1096580 AT1G32950.2 38.981 726 408 14 57 763 1 710 4.15e-150 456
Msa1096580 AT4G21323.1 37.917 749 415 20 29 763 81 793 2.71e-149 456
Msa1096580 AT5G45640.1 39.189 740 370 19 79 763 37 751 4.48e-149 454
Msa1096580 AT4G00230.2 41.913 575 302 9 26 600 35 577 1.77e-135 414
Msa1096580 AT4G21326.1 36.562 733 393 19 57 763 1 687 8.89e-135 415
Msa1096580 AT4G15040.2 38.525 732 369 20 53 763 14 685 8.97e-133 410
Msa1096580 AT4G15040.1 38.525 732 369 20 53 763 14 685 8.97e-133 410
Msa1096580 AT1G32970.1 35.669 785 416 28 4 763 2 722 2.10e-132 410
Msa1096580 AT5G58840.3 41.156 588 276 12 8 593 14 533 6.04e-129 395
Msa1096580 AT1G32940.3 41.493 576 307 11 27 591 28 584 7.42e-126 389
Msa1096580 AT5G67090.1 34.091 704 399 16 69 752 57 715 3.71e-119 376
Msa1096580 AT1G20160.3 38.826 528 280 12 7 520 10 508 8.45e-105 332
Msa1096580 AT2G19170.1 34.204 804 438 31 30 765 32 812 2.18e-104 339
Msa1096580 AT2G19170.2 34.204 804 438 31 30 765 32 812 2.18e-104 339
Msa1096580 AT4G30020.3 32.771 830 470 28 6 767 6 815 1.54e-103 337
Msa1096580 AT4G30020.1 32.771 830 470 28 6 767 6 815 1.54e-103 337
Msa1096580 AT4G30020.4 32.771 830 470 28 6 767 6 815 1.54e-103 337
Msa1096580 AT4G30020.2 32.771 830 470 28 6 767 6 815 1.54e-103 337
Msa1096580 AT2G39850.1 32.170 802 441 34 19 768 20 770 6.01e-102 332
Msa1096580 AT5G44530.1 32.819 777 430 28 50 763 86 833 1.57e-100 329
Msa1096580 AT4G20430.3 31.114 781 440 25 50 763 99 848 2.37e-96 318
Msa1096580 AT4G20430.1 31.114 781 440 25 50 763 99 848 2.37e-96 318
Msa1096580 AT5G44530.2 31.796 802 430 29 50 763 86 858 1.93e-95 316
Msa1096580 AT5G58840.2 38.252 515 248 12 8 520 14 460 1.70e-94 303
Msa1096580 AT4G20430.2 31.039 770 431 24 50 763 99 824 3.39e-92 307
Msa1096580 AT4G21640.1 43.307 381 195 6 7 372 18 392 7.85e-91 301
Msa1096580 AT4G21640.1 41.776 304 161 7 468 763 432 727 8.19e-62 221
Msa1096580 AT1G30600.1 31.008 774 449 28 50 763 78 826 1.89e-86 291
Msa1096580 AT1G62340.1 29.730 777 460 29 49 763 77 829 1.99e-69 244
Msa1096580 AT5G44530.3 30.970 536 301 20 50 537 86 600 2.19e-53 196
Msa1096580 AT1G32980.1 44.022 184 98 4 556 734 3 186 1.03e-41 150
Msa1096580 AT5G59110.1 36.250 160 91 5 615 763 7 166 6.11e-23 97.1

Find 194 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGTCTTACATAGTATATT+TGG 0.115906 7_3:+21224560 Msa1096580:intron
CCATAATGGACAACACTTTA+AGG 0.135242 7_3:+21226978 Msa1096580:CDS
TTAACTCCTCCAACTGTAAT+TGG 0.177724 7_3:-21229016 None:intergenic
CAATGGATTTGCTGCTTTAC+TGG 0.199802 7_3:+21224823 Msa1096580:CDS
ATAGACTTTCTTTGTTTCTT+AGG 0.202018 7_3:+21228656 Msa1096580:CDS
TCTCTAAAGCTTGGAGATTC+TGG 0.203579 7_3:-21226248 None:intergenic
TACGGTGAAGATGTTATTAT+TGG 0.209746 7_3:+21225101 Msa1096580:CDS
CCTTAAAGTGTTGTCCATTA+TGG 0.221179 7_3:-21226978 None:intergenic
TCAGGTGGGGCTACTGTATT+TGG 0.235935 7_3:+21228953 Msa1096580:CDS
TTGTGTTCAGCTGGAAATTC+TGG 0.242299 7_3:+21226862 Msa1096580:CDS
TATTCGGCCCCTTGCTTTCT+CGG 0.245499 7_3:-21227437 None:intergenic
ATTACAGTTGGAGGAGTTAA+AGG 0.246867 7_3:+21229019 Msa1096580:CDS
TACTGCTGCTGAGGCAAAAT+TGG 0.264426 7_3:+21227164 Msa1096580:CDS
CGAATATTGGTTTGTCTTAG+AGG 0.275064 7_3:+21227454 Msa1096580:CDS
ATTTCATGCAGGAAGCTTAT+AGG 0.278258 7_3:+21226445 Msa1096580:intron
ATTATTGGGAATCTTGATTC+TGG 0.284394 7_3:+21225116 Msa1096580:CDS
TTGTCAAATTTCAACCTCTT+AGG 0.294199 7_3:-21228884 None:intergenic
ATAACAATACCTATACTCTA+TGG 0.302979 7_3:+21228764 Msa1096580:CDS
TTAGGAGGAAACTTTGTTTC+CGG 0.310683 7_3:+21226583 Msa1096580:CDS
AGCGGTTAGTCCCACAAAAT+TGG 0.318788 7_3:+21228127 Msa1096580:CDS
GGAAAAGAGTATTGTTGCTT+TGG 0.329480 7_3:+21227492 Msa1096580:CDS
ACACCATTTGACTACGGTTC+TGG 0.338581 7_3:+21228569 Msa1096580:CDS
ACACAGACTTCCGTTGTAAC+AGG 0.350434 7_3:+21226324 Msa1096580:CDS
AGTATAGGTATTGTTATTGT+AGG 0.353249 7_3:-21228758 None:intergenic
GAAAGCAAGGGGCCGAATAT+TGG 0.361258 7_3:+21227441 Msa1096580:CDS
GGAAATTCTGGACCAACATT+TGG 0.362789 7_3:+21226874 Msa1096580:CDS
ATTCGGCCCCTTGCTTTCTC+GGG 0.364321 7_3:-21227436 None:intergenic
AGGTTGAAATTTGACAAAAT+TGG 0.366832 7_3:+21228890 Msa1096580:CDS
GTAAGCAGCAACTCTTGCTT+TGG 0.370138 7_3:-21226653 None:intergenic
AGTATCAAACTCTCTATCTA+AGG 0.375153 7_3:-21226944 None:intergenic
AAAGAAGCTGCTGACATTGC+AGG 0.377043 7_3:+21224851 Msa1096580:CDS
AGAACATGCTAATTTGTGTT+TGG 0.378643 7_3:-21228685 None:intergenic
CCAGGATCCATGGCACGATT+TGG 0.379214 7_3:-21228602 None:intergenic
AACAACACTGACACAACGTT+TGG 0.384042 7_3:-21224978 None:intergenic
AAAGGTTATGCTACCTATGC+AGG 0.384822 7_3:+21226484 Msa1096580:CDS
ATCGATAACTCGGTCAAAAT+CGG 0.387098 7_3:-21224616 None:intergenic
ACAATTGAAGTTACTAGATC+AGG 0.390185 7_3:+21228935 Msa1096580:CDS
CAAATTCCTTTCCACCTTGA+GGG 0.395023 7_3:-21226290 None:intergenic
TGCTTTGGGAGAGCCACCTT+TGG 0.395193 7_3:-21226638 None:intergenic
CCTTTCCACCTTGAGGGAAT+GGG 0.396935 7_3:-21226284 None:intergenic
TTAAGACTCTCCACCCCAAC+TGG 0.401583 7_3:+21228234 Msa1096580:CDS
TATCATGGCAGCCTTTGATA+TGG 0.403712 7_3:+21226723 Msa1096580:CDS
AAGTCTTACATAGTATATTT+GGG 0.404967 7_3:+21224561 Msa1096580:intron
TAGTGTGTAACTTTCTTCCT+CGG 0.409689 7_3:-21225004 None:intergenic
GGAGCAAGATACTTCAATAA+AGG 0.409802 7_3:+21226466 Msa1096580:CDS
CTCTAAGACAAACCAATATT+CGG 0.411784 7_3:-21227453 None:intergenic
TCCTTTCCACCTTGAGGGAA+TGG 0.412240 7_3:-21226285 None:intergenic
ATAGCTGATGGACTCCAGTT+GGG 0.415947 7_3:-21228248 None:intergenic
AAGCATTCGTTGTCATCAAT+TGG 0.422334 7_3:-21226691 None:intergenic
ACGGTGAAGATGTTATTATT+GGG 0.423230 7_3:+21225102 Msa1096580:CDS
TAAGCAGCAACTCTTGCTTT+GGG 0.423295 7_3:-21226652 None:intergenic
CAGATGGCACACACTATGTT+AGG 0.431372 7_3:+21228990 Msa1096580:CDS
GTTCCTTTCATAACCATGTC+TGG 0.433166 7_3:+21228167 Msa1096580:CDS
GAGGAGAAAGCCGCCATGCT+TGG 0.433665 7_3:-21227835 None:intergenic
AGCACGACTTCCAAGAGATA+TGG 0.436655 7_3:-21226773 None:intergenic
ATCTCTGGTGTGATTGTGTT+AGG 0.439078 7_3:-21227865 None:intergenic
CCAAATCGTGCCATGGATCC+TGG 0.439871 7_3:+21228602 Msa1096580:CDS
GATGTTCTTTCCATATCTCT+TGG 0.440296 7_3:+21226763 Msa1096580:CDS
CGATATCAGTGCAGCCTAAG+AGG 0.444861 7_3:+21228870 Msa1096580:CDS
TCTCACACACTATCAACATT+AGG 0.444963 7_3:+21226565 Msa1096580:CDS
AGGCAAACCTTGAGGATCTC+TGG 0.456867 7_3:-21227880 None:intergenic
TAGAGGTATTAATTTGAAAG+TGG 0.460205 7_3:+21227471 Msa1096580:CDS
AAATCTGCAATCATGACAAC+TGG 0.461280 7_3:+21228272 Msa1096580:CDS
TTACTTGGTTGAATTGATGT+AGG 0.461900 7_3:-21227635 None:intergenic
GCATTTCATGCTGTTAAGAA+AGG 0.464377 7_3:+21226829 Msa1096580:CDS
TCGTGCCATGGATCCTGGTT+TGG 0.467570 7_3:+21228607 Msa1096580:CDS
ATGTCATGCCCTCATGTGGC+TGG 0.467947 7_3:+21228197 Msa1096580:CDS
AACATTATTGCTGCCTACTC+AGG 0.468836 7_3:+21228104 Msa1096580:CDS
TTTATGTTCAACTTTGTTGT+GGG 0.469507 7_3:-21227805 None:intergenic
CCTCATGTGGCTGGAGTCGT+TGG 0.471032 7_3:+21228206 Msa1096580:CDS
CTGTATTTGGAGGACTAACT+TGG 0.472254 7_3:+21228966 Msa1096580:CDS
TCTCCAAGCTTTAGAGATGA+AGG 0.473393 7_3:+21226254 Msa1096580:CDS
AAAGAGTATTGTTGCTTTGG+AGG 0.474396 7_3:+21227495 Msa1096580:CDS
TTTGAAACAGTTCCAAATGT+TGG 0.482076 7_3:-21226886 None:intergenic
ACCTTCCCACGTATGATTGA+AGG 0.483480 7_3:-21224653 None:intergenic
ATCCCTTCATCTCTAAAGCT+TGG 0.484071 7_3:-21226257 None:intergenic
GGCAAAATTGGCAGAAGCAC+CGG 0.484704 7_3:+21227176 Msa1096580:CDS
AGGCTTGCGGTGTATGTGCC+TGG 0.487975 7_3:-21228827 None:intergenic
GCAAGCCTCCGTGTACCTGC+TGG 0.488187 7_3:+21228842 Msa1096580:CDS
ACACCAGGTGCGGTTACATC+CGG 0.489969 7_3:-21228080 None:intergenic
TCATACACAAAGAATATCAA+TGG 0.490082 7_3:+21224806 Msa1096580:CDS
CAGCCATGAGAAAGCAAAAG+AGG 0.492323 7_3:+21224772 Msa1096580:intron
ACTGTTGTTCAACTCCATAA+TGG 0.492382 7_3:+21226964 Msa1096580:CDS
TTTGATATGGCTATTCATGA+TGG 0.493672 7_3:+21226736 Msa1096580:CDS
TTGTGATCCATATAGGTGTA+TGG 0.494951 7_3:+21226225 Msa1096580:intron
TTGTAGGATAGTTGAAATCC+AGG 0.495165 7_3:-21228742 None:intergenic
ATTGCAGATTTAATAGCTGA+TGG 0.502679 7_3:-21228260 None:intergenic
CTCGTGGGAATTCATGTCAA+TGG 0.505676 7_3:+21225031 Msa1096580:CDS
CTTTGTAATGATCGGTCTCA+TGG 0.508941 7_3:+21227538 Msa1096580:CDS
GAATGATTCTTTGTAATGAT+CGG 0.512502 7_3:+21227530 Msa1096580:CDS
TTTCTGGCAAAGCTGTAGAA+AGG 0.515569 7_3:-21227122 None:intergenic
GCACATATTACTTATGAAGA+TGG 0.519285 7_3:+21227598 Msa1096580:CDS
CAATTGACCCCGAGAAAGCA+AGG 0.520823 7_3:+21227428 Msa1096580:CDS
TGACCAGAACCGTAGTCAAA+TGG 0.521089 7_3:-21228572 None:intergenic
TAGCCGGATGTAACCGCACC+TGG 0.521380 7_3:+21228077 Msa1096580:intron
ATGTTCAACTTTGTTGTGGG+TGG 0.521679 7_3:-21227802 None:intergenic
TTGTGATGGTATAAACATCC+TGG 0.524213 7_3:+21228724 Msa1096580:CDS
ATCACTGTGTTGTGTTCAGC+TGG 0.525431 7_3:+21226853 Msa1096580:CDS
TGTAGTACTCTATGTATGAA+TGG 0.528404 7_3:+21227403 Msa1096580:intron
ACAAATTCCTTTCCACCTTG+AGG 0.531153 7_3:-21226291 None:intergenic
TCATAAGTAATATGTGCTGC+AGG 0.532850 7_3:-21227592 None:intergenic
GTAACTGACCCATAGAGTAT+AGG 0.535095 7_3:-21228773 None:intergenic
TGTGCTGCAGGCAGCAAATG+AGG 0.535597 7_3:-21227580 None:intergenic
CATGATGAGTATCGATAACT+CGG 0.538022 7_3:-21224626 None:intergenic
AGGAGTCCAATTACAGTTGG+AGG 0.538594 7_3:+21229010 Msa1096580:CDS
TAACAATACCTATACTCTAT+GGG 0.540523 7_3:+21228765 Msa1096580:CDS
AATAGCTGATGGACTCCAGT+TGG 0.541267 7_3:-21228249 None:intergenic
CTCTTTAGAAAAGCAAGATA+CGG 0.542755 7_3:+21225083 Msa1096580:CDS
GTTAGGAGTCCAATTACAGT+TGG 0.544024 7_3:+21229007 Msa1096580:CDS
CCACGAGACAATGCAGGTCA+TGG 0.547777 7_3:+21226541 Msa1096580:CDS
AGCTTTAGAGATGAAGGGAT+AGG 0.548316 7_3:+21226260 Msa1096580:CDS
ATGGGTCAGTTACTTTGAGT+CGG 0.549183 7_3:+21228783 Msa1096580:CDS
ATGGCGGCTTTCTCCTCTAG+AGG 0.552959 7_3:+21227841 Msa1096580:CDS
TAAGCCAACAAAATTAGCTC+CGG 0.554188 7_3:-21226602 None:intergenic
AAAGCCGCCATGCTTGGAGA+AGG 0.557598 7_3:-21227829 None:intergenic
TCCACTCATTACTGCTGCTG+AGG 0.557689 7_3:+21227155 Msa1096580:CDS
GGGTCAGAGGTGCTACAAAA+CGG 0.558399 7_3:+21226505 Msa1096580:CDS
GCTTTAGAGATGAAGGGATA+GGG 0.561131 7_3:+21226261 Msa1096580:CDS
CCCATTCCCTCAAGGTGGAA+AGG 0.562822 7_3:+21226284 Msa1096580:CDS
TCCTTCAATCATACGTGGGA+AGG 0.564947 7_3:+21224652 Msa1096580:CDS
CTGTTTCAAATGTTGCACCT+TGG 0.565485 7_3:+21226899 Msa1096580:CDS
CCATGACCTGCATTGTCTCG+TGG 0.567392 7_3:-21226541 None:intergenic
GGAGGACTAACTTGGTCAGA+TGG 0.568448 7_3:+21228974 Msa1096580:CDS
AGCAGGTACACGGAGGCTTG+CGG 0.569808 7_3:-21228840 None:intergenic
ACACAAATTAGCATGTTCTC+CGG 0.573376 7_3:+21228689 Msa1096580:CDS
ATAGACCAAACCAGGATCCA+TGG 0.574963 7_3:-21228612 None:intergenic
ACTGATATCGAAAGTCCAGC+AGG 0.575391 7_3:-21228857 None:intergenic
GGTGGGGCTACTGTATTTGG+AGG 0.575425 7_3:+21228956 Msa1096580:CDS
TTGCTGCTTACAAAGTCTGT+TGG 0.579371 7_3:+21226665 Msa1096580:CDS
ATGCTTTGATGCTGATATCA+TGG 0.579625 7_3:+21226708 Msa1096580:CDS
CATAAAACCTTCTCCAAGCA+TGG 0.580279 7_3:+21227822 Msa1096580:CDS
GGGACTAACCGCTCCTGAGT+AGG 0.582018 7_3:-21228117 None:intergenic
ACATTAGTATCATCAACGAT+AGG 0.585727 7_3:-21228539 None:intergenic
CGTTGATGATACTAATGTCA+AGG 0.586632 7_3:+21228544 Msa1096580:CDS
GGTACTAATCATCATTGTGA+TGG 0.587076 7_3:+21228710 Msa1096580:CDS
TTCGGCCCCTTGCTTTCTCG+GGG 0.587337 7_3:-21227435 None:intergenic
GGATCACACGAGCATGGTGA+AGG 0.588101 7_3:+21224582 Msa1096580:CDS
TAGCACCTCTGACCCTGCAT+AGG 0.588393 7_3:-21226497 None:intergenic
TCGAAAGTCCAGCAGGTACA+CGG 0.588429 7_3:-21228850 None:intergenic
TTAGGCAACGGAACTGCCAA+AGG 0.589550 7_3:+21226622 Msa1096580:CDS
ATCACAATGATGATTAGTAC+CGG 0.589751 7_3:-21228708 None:intergenic
AGCCACATGAGGGCATGACA+TGG 0.591191 7_3:-21228195 None:intergenic
TGGGGTGGAGAGTCTTAAGA+AGG 0.592221 7_3:-21228229 None:intergenic
TGGCGGCTTTCTCCTCTAGA+GGG 0.592535 7_3:+21227842 Msa1096580:CDS
CACACACTATCAACATTAGG+AGG 0.595449 7_3:+21226568 Msa1096580:CDS
TGCTACCTATGCAGGGTCAG+AGG 0.596228 7_3:+21226492 Msa1096580:CDS
ATTGGACTCTGATAAACGTA+GGG 0.596338 7_3:+21228145 Msa1096580:CDS
CTGATGGACTCCAGTTGGGG+TGG 0.596606 7_3:-21228244 None:intergenic
GTTCCAGACATGGTTATGAA+AGG 0.599567 7_3:-21228170 None:intergenic
ATTGAAGTTACTAGATCAGG+TGG 0.601045 7_3:+21228938 Msa1096580:CDS
TAGCTGATGGACTCCAGTTG+GGG 0.602454 7_3:-21228247 None:intergenic
CATTCGTTGTCATCAATTGG+TGG 0.603809 7_3:-21226688 None:intergenic
ATCATGAATAGCCATATCAA+AGG 0.605729 7_3:-21226734 None:intergenic
AATTGGACTCTGATAAACGT+AGG 0.607379 7_3:+21228144 Msa1096580:CDS
CCAACGACTCCAGCCACATG+AGG 0.608507 7_3:-21228206 None:intergenic
AGCTTAATAACCTGTTACAA+CGG 0.609662 7_3:-21226334 None:intergenic
GCCTCAGCAGCAGTAATGAG+TGG 0.613878 7_3:-21227156 None:intergenic
GATACTCCACGAGACAATGC+AGG 0.614841 7_3:+21226535 Msa1096580:CDS
AATTGACCCCGAGAAAGCAA+GGG 0.618283 7_3:+21227429 Msa1096580:CDS
TTGAAGTTACTAGATCAGGT+GGG 0.618820 7_3:+21228939 Msa1096580:CDS
AAGGCAACACCATTTGACTA+CGG 0.621408 7_3:+21228563 Msa1096580:CDS
GGATAGGGCCCATTCCCTCA+AGG 0.623573 7_3:+21226276 Msa1096580:CDS
CAACGACTCCAGCCACATGA+GGG 0.624633 7_3:-21228205 None:intergenic
TGAAGTTACTAGATCAGGTG+GGG 0.627417 7_3:+21228940 Msa1096580:CDS
CTCCAAGCTTTAGAGATGAA+GGG 0.627451 7_3:+21226255 Msa1096580:CDS
GCAGCAACAGTTAATATCCA+AGG 0.628343 7_3:-21226916 None:intergenic
CATAAGACCAAATCGTGCCA+TGG 0.629594 7_3:+21228595 Msa1096580:CDS
AATAATGTTCACACCAGGTG+CGG 0.632124 7_3:-21228090 None:intergenic
TTTAACTCATAGACCAAACC+AGG 0.633137 7_3:-21228620 None:intergenic
ATCCATGTCATGCCCTCATG+TGG 0.634210 7_3:+21228193 Msa1096580:CDS
TATTTGGGATCACACGAGCA+TGG 0.643674 7_3:+21224576 Msa1096580:CDS
AGTTACACACTACACACTCG+TGG 0.644255 7_3:+21225015 Msa1096580:CDS
GGCAACGGAACTGCCAAAGG+TGG 0.644308 7_3:+21226625 Msa1096580:CDS
GCTTTGGAGGCTGAAGCAGT+TGG 0.644434 7_3:+21227508 Msa1096580:CDS
TGACATGGATGTTCCAGACA+TGG 0.646053 7_3:-21228180 None:intergenic
AAGGTTATGCTACCTATGCA+GGG 0.647517 7_3:+21226485 Msa1096580:CDS
GTTACACACTACACACTCGT+GGG 0.654083 7_3:+21225016 Msa1096580:CDS
TGAATTCCTTCAATCATACG+TGG 0.656733 7_3:+21224647 Msa1096580:CDS
GTGTCAGTGTTGTTAAACCG+AGG 0.657168 7_3:+21224987 Msa1096580:CDS
GATTGTGTTAGGCCCTCTAG+AGG 0.659547 7_3:-21227854 None:intergenic
ATTGACCCCGAGAAAGCAAG+GGG 0.663261 7_3:+21227430 Msa1096580:CDS
TATTGCTGCCTACTCAGGAG+CGG 0.666484 7_3:+21228109 Msa1096580:CDS
TTTCTAAAGAGGGAATGAGA+AGG 0.669613 7_3:-21225071 None:intergenic
CTTGCGGTGTATGTGCCTGG+TGG 0.678429 7_3:-21228824 None:intergenic
TCATATAACAGAAATCCACT+AGG 0.682472 7_3:+21227769 Msa1096580:intron
GTCAATGGAACACAATGGTG+TGG 0.687240 7_3:+21225046 Msa1096580:CDS
GCAGCAATAATGTTCACACC+AGG 0.689041 7_3:-21228095 None:intergenic
GGTGGATGAATATATCCTAG+TGG 0.691470 7_3:-21227784 None:intergenic
GAATTCCTTCAATCATACGT+GGG 0.693804 7_3:+21224648 Msa1096580:CDS
TAGGGCCCATTCCCTCAAGG+TGG 0.702105 7_3:+21226279 Msa1096580:CDS
AATCACACCAGAGATCCTCA+AGG 0.729467 7_3:+21227873 Msa1096580:CDS
AAAACCTTCTCCAAGCATGG+CGG 0.736899 7_3:+21227825 Msa1096580:CDS
TTCATGTCAATGGAACACAA+TGG 0.758442 7_3:+21225041 Msa1096580:CDS
AAAGTCCAGCAGGTACACGG+AGG 0.770494 7_3:-21228847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTACAATAAGATATTAAT+TGG - chr7_3:21224752-21224771 None:intergenic 10.0%
!! TAAAAAATTCCATTTATTAT+CGG - chr7_3:21224892-21224911 None:intergenic 10.0%
!! ATAATATTAAAACTTTACAA+TGG - chr7_3:21225174-21225193 None:intergenic 10.0%
!!! ACAAGATAATTTTTTTTATA+AGG - chr7_3:21225496-21225515 None:intergenic 10.0%
!!! AAAAAAAATTATCTTGTTTT+TGG + chr7_3:21225499-21225518 Msa1096580:intron 10.0%
!!! AATTTTTTCAGTTTTATTTT+TGG - chr7_3:21225663-21225682 None:intergenic 10.0%
!! TCAAAATTCATTATATTTAT+AGG + chr7_3:21225724-21225743 Msa1096580:intron 10.0%
!!! GTATTATAATATTTGATTTA+TGG + chr7_3:21225890-21225909 Msa1096580:intron 10.0%
!! ATTAAGAACAAAAATTAAGA+GGG - chr7_3:21225339-21225358 None:intergenic 15.0%
!! AATTAAGAACAAAAATTAAG+AGG - chr7_3:21225340-21225359 None:intergenic 15.0%
!! ACAATGTTCAAATAAATATT+TGG - chr7_3:21225399-21225418 None:intergenic 15.0%
!!! ATTGTTAACCATATATTTTA+GGG + chr7_3:21225414-21225433 Msa1096580:intron 15.0%
!! ATATTTAACCCTAAAATATA+TGG - chr7_3:21225425-21225444 None:intergenic 15.0%
!! ACATTTATATGAACATAAAT+TGG - chr7_3:21225535-21225554 None:intergenic 15.0%
!!! ACATCTCATTTTATTTTTTA+AGG + chr7_3:21225694-21225713 Msa1096580:intron 15.0%
!! AAATTGCACAATAAAATATA+GGG - chr7_3:21225768-21225787 None:intergenic 15.0%
!! AAAATTGCACAATAAAATAT+AGG - chr7_3:21225769-21225788 None:intergenic 15.0%
!! TGCATGAAATATATATTAAA+AGG - chr7_3:21226435-21226454 None:intergenic 15.0%
!!! TTTTAATATATATTTCATGC+AGG + chr7_3:21226434-21226453 Msa1096580:intron 15.0%
!!! TTTGTTGTTTAACATATTTT+TGG + chr7_3:21227241-21227260 Msa1096580:intron 15.0%
!! GAAATTAATAATGAAAGAAT+AGG - chr7_3:21227903-21227922 None:intergenic 15.0%
!! TTATGTTAGGAAATAAAATA+CGG - chr7_3:21227957-21227976 None:intergenic 15.0%
!! AATTTGGAAAATATTATGTT+AGG - chr7_3:21227970-21227989 None:intergenic 15.0%
!! CTAAAGAATCAAAAATAAAA+AGG - chr7_3:21228060-21228079 None:intergenic 15.0%
!! ACAAACAAACAAAAAAAGTT+AGG - chr7_3:21224528-21224547 None:intergenic 20.0%
!!! CTTTTTTTGTTTGTTTGTTT+TGG + chr7_3:21224530-21224549 Msa1096580:intron 20.0%
!! AAAGTCTTACATAGTATATT+TGG + chr7_3:21224560-21224579 Msa1096580:intron 20.0%
!! AAGTCTTACATAGTATATTT+GGG + chr7_3:21224561-21224580 Msa1096580:intron 20.0%
!!! TTTATTATCGGTTATTTTGA+AGG - chr7_3:21224880-21224899 None:intergenic 20.0%
!! TCAAAATAACCGATAATAAA+TGG + chr7_3:21224880-21224899 Msa1096580:intron 20.0%
!! GTAAATAAACATGAAAATCA+TGG + chr7_3:21225297-21225316 Msa1096580:intron 20.0%
!!! CATTGTTAACCATATATTTT+AGG + chr7_3:21225413-21225432 Msa1096580:intron 20.0%
!! CATAATAAACGAACATAAAA+TGG - chr7_3:21225590-21225609 None:intergenic 20.0%
!! TGTTCATTAGGTAAAAAAAT+GGG - chr7_3:21226055-21226074 None:intergenic 20.0%
!! TTGTTCATTAGGTAAAAAAA+TGG - chr7_3:21226056-21226075 None:intergenic 20.0%
!!! TTTTTTACCTAATGAACAAT+TGG + chr7_3:21226057-21226076 Msa1096580:intron 20.0%
!! ATTAAATTTGTGATCCATAT+AGG + chr7_3:21226218-21226237 Msa1096580:intron 20.0%
!! GAAAAACTTGACTTAATTAA+TGG - chr7_3:21227036-21227055 None:intergenic 20.0%
!!! TGTTTAACATATTTTTGGAA+TGG + chr7_3:21227246-21227265 Msa1096580:intron 20.0%
!! ATGGTGAATGTAAATATAAT+TGG + chr7_3:21227265-21227284 Msa1096580:intron 20.0%
!! ATAATAACGACAGTAATTAA+AGG - chr7_3:21227750-21227769 None:intergenic 20.0%
!!! TTTATTTTTGATTCTTTAGC+CGG + chr7_3:21228061-21228080 Msa1096580:intron 20.0%
!! ACATGAGATATATTAAATTG+AGG - chr7_3:21228345-21228364 None:intergenic 20.0%
! AAGTAGTAAAAAGTAAGAAC+AGG - chr7_3:21224406-21224425 None:intergenic 25.0%
! TCATACACAAAGAATATCAA+TGG + chr7_3:21224806-21224825 Msa1096580:CDS 25.0%
! TGAACATAAATTGGTCATTA+AGG - chr7_3:21225526-21225545 None:intergenic 25.0%
! GTCAAAATTATAACTCCTTA+TGG + chr7_3:21225553-21225572 Msa1096580:intron 25.0%
!!! GTTTTATTTTTGGTCTCTAA+TGG - chr7_3:21225653-21225672 None:intergenic 25.0%
! ATTGAATCCAATTGTTCATT+AGG - chr7_3:21226067-21226086 None:intergenic 25.0%
!!! TGGATTTTTTTTAGATGCAA+GGG - chr7_3:21226113-21226132 None:intergenic 25.0%
!!! ATGGATTTTTTTTAGATGCA+AGG - chr7_3:21226114-21226133 None:intergenic 25.0%
!!! TGTTCATTTCTTTTAAAGAG+TGG - chr7_3:21226370-21226389 None:intergenic 25.0%
! GGTTAAATCATAACATTTGA+TGG - chr7_3:21226414-21226433 None:intergenic 25.0%
!! TCCATTATTGATTGATTATC+AGG + chr7_3:21227092-21227111 Msa1096580:intron 25.0%
!! CCATTATTGATTGATTATCA+GGG + chr7_3:21227093-21227112 Msa1096580:intron 25.0%
!!! TAGAGGTATTAATTTGAAAG+TGG + chr7_3:21227471-21227490 Msa1096580:CDS 25.0%
! GAATGATTCTTTGTAATGAT+CGG + chr7_3:21227530-21227549 Msa1096580:CDS 25.0%
!! TTTATGTTCAACTTTGTTGT+GGG - chr7_3:21227808-21227827 None:intergenic 25.0%
!! TTTTATGTTCAACTTTGTTG+TGG - chr7_3:21227809-21227828 None:intergenic 25.0%
! GAATCAAAAATAAAAAGGTG+AGG - chr7_3:21228055-21228074 None:intergenic 25.0%
! AGAAAATACAACAACTAACT+AGG - chr7_3:21228407-21228426 None:intergenic 25.0%
!! ATAGACTTTCTTTGTTTCTT+AGG + chr7_3:21228656-21228675 Msa1096580:CDS 25.0%
!! AGTATAGGTATTGTTATTGT+AGG - chr7_3:21228761-21228780 None:intergenic 25.0%
! ATAACAATACCTATACTCTA+TGG + chr7_3:21228764-21228783 Msa1096580:CDS 25.0%
! TAACAATACCTATACTCTAT+GGG + chr7_3:21228765-21228784 Msa1096580:CDS 25.0%
! AGGTTGAAATTTGACAAAAT+TGG + chr7_3:21228890-21228909 Msa1096580:CDS 25.0%
! TGAATTGCTTACACTTTTGT+TGG + chr7_3:21224703-21224722 Msa1096580:intron 30.0%
CTACAATATCAAACACAAGA+TGG - chr7_3:21224953-21224972 None:intergenic 30.0%
!! GTATCTTGCTTTTCTAAAGA+GGG - chr7_3:21225084-21225103 None:intergenic 30.0%
! CTCTTTAGAAAAGCAAGATA+CGG + chr7_3:21225083-21225102 Msa1096580:CDS 30.0%
TACGGTGAAGATGTTATTAT+TGG + chr7_3:21225101-21225120 Msa1096580:CDS 30.0%
ACGGTGAAGATGTTATTATT+GGG + chr7_3:21225102-21225121 Msa1096580:CDS 30.0%
ATTATTGGGAATCTTGATTC+TGG + chr7_3:21225116-21225135 Msa1096580:CDS 30.0%
TTAGTAGAAGATGATCGTTT+AGG + chr7_3:21225861-21225880 Msa1096580:intron 30.0%
TTATTAGTCAGCATGAAAGA+AGG - chr7_3:21226004-21226023 None:intergenic 30.0%
GTTGTGATGAAAAAGTAGAA+TGG - chr7_3:21226133-21226152 None:intergenic 30.0%
!! ACATGTGTTATTGTTTTCGT+CGG + chr7_3:21226189-21226208 Msa1096580:intron 30.0%
AGCTTAATAACCTGTTACAA+CGG - chr7_3:21226337-21226356 None:intergenic 30.0%
!! CATTTCTTTTAAAGAGTGGA+AGG - chr7_3:21226366-21226385 None:intergenic 30.0%
ATCATGAATAGCCATATCAA+AGG - chr7_3:21226737-21226756 None:intergenic 30.0%
TTTGATATGGCTATTCATGA+TGG + chr7_3:21226736-21226755 Msa1096580:CDS 30.0%
! TTTGAAACAGTTCCAAATGT+TGG - chr7_3:21226889-21226908 None:intergenic 30.0%
AGTATCAAACTCTCTATCTA+AGG - chr7_3:21226947-21226966 None:intergenic 30.0%
GTCACAAGATGAAGAAAAAT+TGG - chr7_3:21227010-21227029 None:intergenic 30.0%
AGAGAAGAAAATGAAAGTGA+TGG - chr7_3:21227066-21227085 None:intergenic 30.0%
CCCTGATAATCAATCAATAA+TGG - chr7_3:21227096-21227115 None:intergenic 30.0%
GTATATACTGCTTGTATTTG+CGG + chr7_3:21227213-21227232 Msa1096580:intron 30.0%
TTGGTTGTTAGTAATGTCAA+TGG + chr7_3:21227284-21227303 Msa1096580:intron 30.0%
!! TGCTTTTGAAAGTACAAACA+TGG + chr7_3:21227355-21227374 Msa1096580:intron 30.0%
! ATACATAGAGTACTACACAA+TGG - chr7_3:21227400-21227419 None:intergenic 30.0%
TGTAGTACTCTATGTATGAA+TGG + chr7_3:21227403-21227422 Msa1096580:intron 30.0%
!! CTCTAAGACAAACCAATATT+CGG - chr7_3:21227456-21227475 None:intergenic 30.0%
GCACATATTACTTATGAAGA+TGG + chr7_3:21227598-21227617 Msa1096580:CDS 30.0%
TTACTTGGTTGAATTGATGT+AGG - chr7_3:21227638-21227657 None:intergenic 30.0%
AGATCAACTACACAAATGAA+GGG - chr7_3:21227687-21227706 None:intergenic 30.0%
AAGATCAACTACACAAATGA+AGG - chr7_3:21227688-21227707 None:intergenic 30.0%
TCATATAACAGAAATCCACT+AGG + chr7_3:21227769-21227788 Msa1096580:intron 30.0%
! GTTACAACTAATGGACAATT+TGG - chr7_3:21227986-21228005 None:intergenic 30.0%
AAACCACAAGTTACAACTAA+TGG - chr7_3:21227995-21228014 None:intergenic 30.0%
! TTATCAGAGTCCAATTTTGT+GGG - chr7_3:21228140-21228159 None:intergenic 30.0%
! TTTATCAGAGTCCAATTTTG+TGG - chr7_3:21228141-21228160 None:intergenic 30.0%
ATTGCAGATTTAATAGCTGA+TGG - chr7_3:21228263-21228282 None:intergenic 30.0%
TTGCTTCTATGAATAAAGAG+AGG + chr7_3:21228451-21228470 Msa1096580:intron 30.0%
ACATTAGTATCATCAACGAT+AGG - chr7_3:21228542-21228561 None:intergenic 30.0%
! AGAACATGCTAATTTGTGTT+TGG - chr7_3:21228688-21228707 None:intergenic 30.0%
ATCACAATGATGATTAGTAC+CGG - chr7_3:21228711-21228730 None:intergenic 30.0%
TTGTCAAATTTCAACCTCTT+AGG - chr7_3:21228887-21228906 None:intergenic 30.0%
ACAATTGAAGTTACTAGATC+AGG + chr7_3:21228935-21228954 Msa1096580:CDS 30.0%
ATCGATAACTCGGTCAAAAT+CGG - chr7_3:21224619-21224638 None:intergenic 35.0%
!! CATGATGAGTATCGATAACT+CGG - chr7_3:21224629-21224648 None:intergenic 35.0%
TGAATTCCTTCAATCATACG+TGG + chr7_3:21224647-21224666 Msa1096580:CDS 35.0%
GAATTCCTTCAATCATACGT+GGG + chr7_3:21224648-21224667 Msa1096580:CDS 35.0%
TAGTGTGTAACTTTCTTCCT+CGG - chr7_3:21225007-21225026 None:intergenic 35.0%
TTCATGTCAATGGAACACAA+TGG + chr7_3:21225041-21225060 Msa1096580:CDS 35.0%
! TTTCTAAAGAGGGAATGAGA+AGG - chr7_3:21225074-21225093 None:intergenic 35.0%
!! CGTATCTTGCTTTTCTAAAG+AGG - chr7_3:21225085-21225104 None:intergenic 35.0%
ATGGATACATCTTGACCATA+AGG - chr7_3:21225571-21225590 None:intergenic 35.0%
GCATGAAAGAAGGAATAGAT+AGG - chr7_3:21225994-21226013 None:intergenic 35.0%
TTGTGATCCATATAGGTGTA+TGG + chr7_3:21226225-21226244 Msa1096580:intron 35.0%
ATTTCATGCAGGAAGCTTAT+AGG + chr7_3:21226445-21226464 Msa1096580:intron 35.0%
GGAGCAAGATACTTCAATAA+AGG + chr7_3:21226466-21226485 Msa1096580:CDS 35.0%
TCTCACACACTATCAACATT+AGG + chr7_3:21226565-21226584 Msa1096580:CDS 35.0%
! TTAGGAGGAAACTTTGTTTC+CGG + chr7_3:21226583-21226602 Msa1096580:CDS 35.0%
TAAGCCAACAAAATTAGCTC+CGG - chr7_3:21226605-21226624 None:intergenic 35.0%
!!! AATTTTGTTGGCTTAGGCAA+CGG + chr7_3:21226610-21226629 Msa1096580:CDS 35.0%
AAGCATTCGTTGTCATCAAT+TGG - chr7_3:21226694-21226713 None:intergenic 35.0%
ATGCTTTGATGCTGATATCA+TGG + chr7_3:21226708-21226727 Msa1096580:CDS 35.0%
GATGTTCTTTCCATATCTCT+TGG + chr7_3:21226763-21226782 Msa1096580:CDS 35.0%
GCATTTCATGCTGTTAAGAA+AGG + chr7_3:21226829-21226848 Msa1096580:CDS 35.0%
ACTGTTGTTCAACTCCATAA+TGG + chr7_3:21226964-21226983 Msa1096580:CDS 35.0%
!! CCTTAAAGTGTTGTCCATTA+TGG - chr7_3:21226981-21227000 None:intergenic 35.0%
!! CCATAATGGACAACACTTTA+AGG + chr7_3:21226978-21226997 Msa1096580:CDS 35.0%
!! AGTGGATAAAGCTTGTTTTC+TGG - chr7_3:21227141-21227160 None:intergenic 35.0%
! TATACTTACGCGTTTTCAAC+CGG - chr7_3:21227198-21227217 None:intergenic 35.0%
GTTGTTAGTAATGTCAATGG+AGG + chr7_3:21227287-21227306 Msa1096580:intron 35.0%
!! CGAATATTGGTTTGTCTTAG+AGG + chr7_3:21227454-21227473 Msa1096580:CDS 35.0%
!! GGAAAAGAGTATTGTTGCTT+TGG + chr7_3:21227492-21227511 Msa1096580:CDS 35.0%
!! AAAGAGTATTGTTGCTTTGG+AGG + chr7_3:21227495-21227514 Msa1096580:CDS 35.0%
TCATAAGTAATATGTGCTGC+AGG - chr7_3:21227595-21227614 None:intergenic 35.0%
ACAAATGAAGGGATGACAAA+AGG - chr7_3:21227676-21227695 None:intergenic 35.0%
TGTCCATTAGTTGTAACTTG+TGG + chr7_3:21227989-21228008 Msa1096580:intron 35.0%
AATTGGACTCTGATAAACGT+AGG + chr7_3:21228144-21228163 Msa1096580:CDS 35.0%
ATTGGACTCTGATAAACGTA+GGG + chr7_3:21228145-21228164 Msa1096580:CDS 35.0%
AAATCTGCAATCATGACAAC+TGG + chr7_3:21228272-21228291 Msa1096580:CDS 35.0%
! TGATGTGTTTTCTTTCAGCT+AGG + chr7_3:21228495-21228514 Msa1096580:intron 35.0%
! TTTTCTTTCAGCTAGGACAA+GGG + chr7_3:21228502-21228521 Msa1096580:intron 35.0%
!! CGTTGATGATACTAATGTCA+AGG + chr7_3:21228544-21228563 Msa1096580:CDS 35.0%
TTTAACTCATAGACCAAACC+AGG - chr7_3:21228623-21228642 None:intergenic 35.0%
ACACAAATTAGCATGTTCTC+CGG + chr7_3:21228689-21228708 Msa1096580:CDS 35.0%
GGTACTAATCATCATTGTGA+TGG + chr7_3:21228710-21228729 Msa1096580:CDS 35.0%
TTGTGATGGTATAAACATCC+TGG + chr7_3:21228724-21228743 Msa1096580:CDS 35.0%
TTGTAGGATAGTTGAAATCC+AGG - chr7_3:21228745-21228764 None:intergenic 35.0%
AGTCGGAAGCTTAAAAATGT+TGG + chr7_3:21228800-21228819 Msa1096580:CDS 35.0%
ATTGAAGTTACTAGATCAGG+TGG + chr7_3:21228938-21228957 Msa1096580:CDS 35.0%
TTGAAGTTACTAGATCAGGT+GGG + chr7_3:21228939-21228958 Msa1096580:CDS 35.0%
TTAACTCCTCCAACTGTAAT+TGG - chr7_3:21229019-21229038 None:intergenic 35.0%
ATTACAGTTGGAGGAGTTAA+AGG + chr7_3:21229019-21229038 Msa1096580:CDS 35.0%
! CAGGAACAAGAGAAGCTTTT+TGG - chr7_3:21224387-21224406 None:intergenic 40.0%
! TTGCCTCTTTTGCTTTCTCA+TGG - chr7_3:21224778-21224797 None:intergenic 40.0%
!! CAATGGATTTGCTGCTTTAC+TGG + chr7_3:21224823-21224842 Msa1096580:CDS 40.0%
AACAACACTGACACAACGTT+TGG - chr7_3:21224981-21225000 None:intergenic 40.0%
GAATTGCAATCACTTTGTCG+TGG + chr7_3:21226028-21226047 Msa1096580:intron 40.0%
ATTCTGGCCATACACCTATA+TGG - chr7_3:21226235-21226254 None:intergenic 40.0%
!! TCTCTAAAGCTTGGAGATTC+TGG - chr7_3:21226251-21226270 None:intergenic 40.0%
!! TCTCCAAGCTTTAGAGATGA+AGG + chr7_3:21226254-21226273 Msa1096580:CDS 40.0%
!! CTCCAAGCTTTAGAGATGAA+GGG + chr7_3:21226255-21226274 Msa1096580:CDS 40.0%
!! ATCCCTTCATCTCTAAAGCT+TGG - chr7_3:21226260-21226279 None:intergenic 40.0%
!! AGCTTTAGAGATGAAGGGAT+AGG + chr7_3:21226260-21226279 Msa1096580:CDS 40.0%
!! GCTTTAGAGATGAAGGGATA+GGG + chr7_3:21226261-21226280 Msa1096580:CDS 40.0%
CAAATTCCTTTCCACCTTGA+GGG - chr7_3:21226293-21226312 None:intergenic 40.0%
ACAAATTCCTTTCCACCTTG+AGG - chr7_3:21226294-21226313 None:intergenic 40.0%
AAAGGTTATGCTACCTATGC+AGG + chr7_3:21226484-21226503 Msa1096580:CDS 40.0%
AAGGTTATGCTACCTATGCA+GGG + chr7_3:21226485-21226504 Msa1096580:CDS 40.0%
CACACACTATCAACATTAGG+AGG + chr7_3:21226568-21226587 Msa1096580:CDS 40.0%
! GTTTCCGGAGCTAATTTTGT+TGG + chr7_3:21226598-21226617 Msa1096580:CDS 40.0%
!!! GGAGCTAATTTTGTTGGCTT+AGG + chr7_3:21226604-21226623 Msa1096580:CDS 40.0%
TAAGCAGCAACTCTTGCTTT+GGG - chr7_3:21226655-21226674 None:intergenic 40.0%
! TTGCTGCTTACAAAGTCTGT+TGG + chr7_3:21226665-21226684 Msa1096580:CDS 40.0%
CATTCGTTGTCATCAATTGG+TGG - chr7_3:21226691-21226710 None:intergenic 40.0%
TATCATGGCAGCCTTTGATA+TGG + chr7_3:21226723-21226742 Msa1096580:CDS 40.0%
TTGTGTTCAGCTGGAAATTC+TGG + chr7_3:21226862-21226881 Msa1096580:CDS 40.0%
GGAAATTCTGGACCAACATT+TGG + chr7_3:21226874-21226893 Msa1096580:CDS 40.0%
CTGTTTCAAATGTTGCACCT+TGG + chr7_3:21226899-21226918 Msa1096580:CDS 40.0%
GCAGCAACAGTTAATATCCA+AGG - chr7_3:21226919-21226938 None:intergenic 40.0%
! TTTCTGGCAAAGCTGTAGAA+AGG - chr7_3:21227125-21227144 None:intergenic 40.0%
CTTTGTAATGATCGGTCTCA+TGG + chr7_3:21227538-21227557 Msa1096580:CDS 40.0%
AGGGAGCAACAAAAGTTACT+TGG - chr7_3:21227653-21227672 None:intergenic 40.0%
ATGAAGGGATGACAAAAGGA+GGG - chr7_3:21227672-21227691 None:intergenic 40.0%
AATGAAGGGATGACAAAAGG+AGG - chr7_3:21227673-21227692 None:intergenic 40.0%
GGTGGATGAATATATCCTAG+TGG - chr7_3:21227787-21227806 None:intergenic 40.0%
! ATGTTCAACTTTGTTGTGGG+TGG - chr7_3:21227805-21227824 None:intergenic 40.0%
CATAAAACCTTCTCCAAGCA+TGG + chr7_3:21227822-21227841 Msa1096580:CDS 40.0%
ATCTCTGGTGTGATTGTGTT+AGG - chr7_3:21227868-21227887 None:intergenic 40.0%
GAAAGAATAGGCAAACCTTG+AGG - chr7_3:21227891-21227910 None:intergenic 40.0%
AATAATGTTCACACCAGGTG+CGG - chr7_3:21228093-21228112 None:intergenic 40.0%
AACATTATTGCTGCCTACTC+AGG + chr7_3:21228104-21228123 Msa1096580:CDS 40.0%
GTTCCTTTCATAACCATGTC+TGG + chr7_3:21228167-21228186 Msa1096580:CDS 40.0%
GTTCCAGACATGGTTATGAA+AGG - chr7_3:21228173-21228192 None:intergenic 40.0%
! GTTTTCTTTCAGCTAGGACA+AGG + chr7_3:21228501-21228520 Msa1096580:intron 40.0%
AAGGCAACACCATTTGACTA+CGG + chr7_3:21228563-21228582 Msa1096580:CDS 40.0%
GTAACTGACCCATAGAGTAT+AGG - chr7_3:21228776-21228795 None:intergenic 40.0%
! ATGGGTCAGTTACTTTGAGT+CGG + chr7_3:21228783-21228802 Msa1096580:CDS 40.0%
CTTAAAAATGTTGGACCACC+AGG + chr7_3:21228809-21228828 Msa1096580:CDS 40.0%
TGAAGTTACTAGATCAGGTG+GGG + chr7_3:21228940-21228959 Msa1096580:CDS 40.0%
CTGTATTTGGAGGACTAACT+TGG + chr7_3:21228966-21228985 Msa1096580:CDS 40.0%
GTTAGGAGTCCAATTACAGT+TGG + chr7_3:21229007-21229026 Msa1096580:CDS 40.0%
! TATTTGGGATCACACGAGCA+TGG + chr7_3:21224576-21224595 Msa1096580:CDS 45.0%
TCCTTCAATCATACGTGGGA+AGG + chr7_3:21224652-21224671 Msa1096580:CDS 45.0%
ACCTTCCCACGTATGATTGA+AGG - chr7_3:21224656-21224675 None:intergenic 45.0%
CAGCCATGAGAAAGCAAAAG+AGG + chr7_3:21224772-21224791 Msa1096580:intron 45.0%
AAAGAAGCTGCTGACATTGC+AGG + chr7_3:21224851-21224870 Msa1096580:CDS 45.0%
! GTGTCAGTGTTGTTAAACCG+AGG + chr7_3:21224987-21225006 Msa1096580:CDS 45.0%
AGTTACACACTACACACTCG+TGG + chr7_3:21225015-21225034 Msa1096580:CDS 45.0%
GTTACACACTACACACTCGT+GGG + chr7_3:21225016-21225035 Msa1096580:CDS 45.0%
CTCGTGGGAATTCATGTCAA+TGG + chr7_3:21225031-21225050 Msa1096580:CDS 45.0%
GTCAATGGAACACAATGGTG+TGG + chr7_3:21225046-21225065 Msa1096580:CDS 45.0%
ACACAGACTTCCGTTGTAAC+AGG + chr7_3:21226324-21226343 Msa1096580:CDS 45.0%
GTAAGCAGCAACTCTTGCTT+TGG - chr7_3:21226656-21226675 None:intergenic 45.0%
AGCACGACTTCCAAGAGATA+TGG - chr7_3:21226776-21226795 None:intergenic 45.0%
ATCACTGTGTTGTGTTCAGC+TGG + chr7_3:21226853-21226872 Msa1096580:CDS 45.0%
TACTGCTGCTGAGGCAAAAT+TGG + chr7_3:21227164-21227183 Msa1096580:CDS 45.0%
AATTGACCCCGAGAAAGCAA+GGG + chr7_3:21227429-21227448 Msa1096580:CDS 45.0%
AAAACCTTCTCCAAGCATGG+CGG + chr7_3:21227825-21227844 Msa1096580:CDS 45.0%
AATCACACCAGAGATCCTCA+AGG + chr7_3:21227873-21227892 Msa1096580:CDS 45.0%
GCAGCAATAATGTTCACACC+AGG - chr7_3:21228098-21228117 None:intergenic 45.0%
! AGCGGTTAGTCCCACAAAAT+TGG + chr7_3:21228127-21228146 Msa1096580:CDS 45.0%
TGACATGGATGTTCCAGACA+TGG - chr7_3:21228183-21228202 None:intergenic 45.0%
!! ATAGCTGATGGACTCCAGTT+GGG - chr7_3:21228251-21228270 None:intergenic 45.0%
!! AATAGCTGATGGACTCCAGT+TGG - chr7_3:21228252-21228271 None:intergenic 45.0%
ACACCATTTGACTACGGTTC+TGG + chr7_3:21228569-21228588 Msa1096580:CDS 45.0%
TGACCAGAACCGTAGTCAAA+TGG - chr7_3:21228575-21228594 None:intergenic 45.0%
CATAAGACCAAATCGTGCCA+TGG + chr7_3:21228595-21228614 Msa1096580:CDS 45.0%
ATAGACCAAACCAGGATCCA+TGG - chr7_3:21228615-21228634 None:intergenic 45.0%
ACTGATATCGAAAGTCCAGC+AGG - chr7_3:21228860-21228879 None:intergenic 45.0%
CAGATGGCACACACTATGTT+AGG + chr7_3:21228990-21229009 Msa1096580:CDS 45.0%
AGGAGTCCAATTACAGTTGG+AGG + chr7_3:21229010-21229029 Msa1096580:CDS 45.0%
!! ACATTTATATATTTATAATA+AGG + chr7_3:21225614-21225633 Msa1096580:intron 5.0%
CCTTTCCACCTTGAGGGAAT+GGG - chr7_3:21226287-21226306 None:intergenic 50.0%
TCCTTTCCACCTTGAGGGAA+TGG - chr7_3:21226288-21226307 None:intergenic 50.0%
!! GGGTCAGAGGTGCTACAAAA+CGG + chr7_3:21226505-21226524 Msa1096580:CDS 50.0%
GATACTCCACGAGACAATGC+AGG + chr7_3:21226535-21226554 Msa1096580:CDS 50.0%
TTAGGCAACGGAACTGCCAA+AGG + chr7_3:21226622-21226641 Msa1096580:CDS 50.0%
TCCACTCATTACTGCTGCTG+AGG + chr7_3:21227155-21227174 Msa1096580:CDS 50.0%
! GGCAAAATTGGCAGAAGCAC+CGG + chr7_3:21227176-21227195 Msa1096580:CDS 50.0%
CAATTGACCCCGAGAAAGCA+AGG + chr7_3:21227428-21227447 Msa1096580:CDS 50.0%
ATTGACCCCGAGAAAGCAAG+GGG + chr7_3:21227430-21227449 Msa1096580:CDS 50.0%
TATTCGGCCCCTTGCTTTCT+CGG - chr7_3:21227440-21227459 None:intergenic 50.0%
GAAAGCAAGGGGCCGAATAT+TGG + chr7_3:21227441-21227460 Msa1096580:CDS 50.0%
GATTGTGTTAGGCCCTCTAG+AGG - chr7_3:21227857-21227876 None:intergenic 50.0%
AGGCAAACCTTGAGGATCTC+TGG - chr7_3:21227883-21227902 None:intergenic 50.0%
TATTGCTGCCTACTCAGGAG+CGG + chr7_3:21228109-21228128 Msa1096580:CDS 50.0%
ATCCATGTCATGCCCTCATG+TGG + chr7_3:21228193-21228212 Msa1096580:CDS 50.0%
TGGGGTGGAGAGTCTTAAGA+AGG - chr7_3:21228232-21228251 None:intergenic 50.0%
TTAAGACTCTCCACCCCAAC+TGG + chr7_3:21228234-21228253 Msa1096580:CDS 50.0%
!! TAGCTGATGGACTCCAGTTG+GGG - chr7_3:21228250-21228269 None:intergenic 50.0%
TCGAAAGTCCAGCAGGTACA+CGG - chr7_3:21228853-21228872 None:intergenic 50.0%
CGATATCAGTGCAGCCTAAG+AGG + chr7_3:21228870-21228889 Msa1096580:CDS 50.0%
TCAGGTGGGGCTACTGTATT+TGG + chr7_3:21228953-21228972 Msa1096580:CDS 50.0%
GGAGGACTAACTTGGTCAGA+TGG + chr7_3:21228974-21228993 Msa1096580:CDS 50.0%
GGATCACACGAGCATGGTGA+AGG + chr7_3:21224582-21224601 Msa1096580:CDS 55.0%
CCCATTCCCTCAAGGTGGAA+AGG + chr7_3:21226284-21226303 Msa1096580:CDS 55.0%
TGCTACCTATGCAGGGTCAG+AGG + chr7_3:21226492-21226511 Msa1096580:CDS 55.0%
TAGCACCTCTGACCCTGCAT+AGG - chr7_3:21226500-21226519 None:intergenic 55.0%
CCATGACCTGCATTGTCTCG+TGG - chr7_3:21226544-21226563 None:intergenic 55.0%
CCACGAGACAATGCAGGTCA+TGG + chr7_3:21226541-21226560 Msa1096580:CDS 55.0%
!! TGCTTTGGGAGAGCCACCTT+TGG - chr7_3:21226641-21226660 None:intergenic 55.0%
GCCTCAGCAGCAGTAATGAG+TGG - chr7_3:21227159-21227178 None:intergenic 55.0%
ATTCGGCCCCTTGCTTTCTC+GGG - chr7_3:21227439-21227458 None:intergenic 55.0%
!! GCTTTGGAGGCTGAAGCAGT+TGG + chr7_3:21227508-21227527 Msa1096580:CDS 55.0%
TGTGCTGCAGGCAGCAAATG+AGG - chr7_3:21227583-21227602 None:intergenic 55.0%
AAAGCCGCCATGCTTGGAGA+AGG - chr7_3:21227832-21227851 None:intergenic 55.0%
ATGGCGGCTTTCTCCTCTAG+AGG + chr7_3:21227841-21227860 Msa1096580:CDS 55.0%
TGGCGGCTTTCTCCTCTAGA+GGG + chr7_3:21227842-21227861 Msa1096580:CDS 55.0%
ACACCAGGTGCGGTTACATC+CGG - chr7_3:21228083-21228102 None:intergenic 55.0%
! AGCCACATGAGGGCATGACA+TGG - chr7_3:21228198-21228217 None:intergenic 55.0%
ATGTCATGCCCTCATGTGGC+TGG + chr7_3:21228197-21228216 Msa1096580:CDS 55.0%
CAACGACTCCAGCCACATGA+GGG - chr7_3:21228208-21228227 None:intergenic 55.0%
CCAGGATCCATGGCACGATT+TGG - chr7_3:21228605-21228624 None:intergenic 55.0%
CCAAATCGTGCCATGGATCC+TGG + chr7_3:21228602-21228621 Msa1096580:CDS 55.0%
TCGTGCCATGGATCCTGGTT+TGG + chr7_3:21228607-21228626 Msa1096580:CDS 55.0%
AAAGTCCAGCAGGTACACGG+AGG - chr7_3:21228850-21228869 None:intergenic 55.0%
GGTGGGGCTACTGTATTTGG+AGG + chr7_3:21228956-21228975 Msa1096580:CDS 55.0%
GGATAGGGCCCATTCCCTCA+AGG + chr7_3:21226276-21226295 Msa1096580:CDS 60.0%
TAGGGCCCATTCCCTCAAGG+TGG + chr7_3:21226279-21226298 Msa1096580:CDS 60.0%
GGCAACGGAACTGCCAAAGG+TGG + chr7_3:21226625-21226644 Msa1096580:CDS 60.0%
TTCGGCCCCTTGCTTTCTCG+GGG - chr7_3:21227438-21227457 None:intergenic 60.0%
GAGGAGAAAGCCGCCATGCT+TGG - chr7_3:21227838-21227857 None:intergenic 60.0%
TAGCCGGATGTAACCGCACC+TGG + chr7_3:21228077-21228096 Msa1096580:intron 60.0%
GGGACTAACCGCTCCTGAGT+AGG - chr7_3:21228120-21228139 None:intergenic 60.0%
CCAACGACTCCAGCCACATG+AGG - chr7_3:21228209-21228228 None:intergenic 60.0%
CCTCATGTGGCTGGAGTCGT+TGG + chr7_3:21228206-21228225 Msa1096580:CDS 60.0%
!! CTGATGGACTCCAGTTGGGG+TGG - chr7_3:21228247-21228266 None:intergenic 60.0%
CTTGCGGTGTATGTGCCTGG+TGG - chr7_3:21228827-21228846 None:intergenic 60.0%
AGGCTTGCGGTGTATGTGCC+TGG - chr7_3:21228830-21228849 None:intergenic 60.0%
AGCAGGTACACGGAGGCTTG+CGG - chr7_3:21228843-21228862 None:intergenic 60.0%
GCAAGCCTCCGTGTACCTGC+TGG + chr7_3:21228842-21228861 Msa1096580:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 21224374 21229045 21224374 ID=Msa1096580;Name=Msa1096580
chr7_3 mRNA 21224374 21229045 21224374 ID=Msa1096580-mRNA-1;Parent=Msa1096580;Name=Msa1096580-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|11|0|768
chr7_3 exon 21224374 21224454 21224374 ID=Msa1096580-mRNA-1:exon:4602;Parent=Msa1096580-mRNA-1
chr7_3 exon 21224564 21224673 21224564 ID=Msa1096580-mRNA-1:exon:4603;Parent=Msa1096580-mRNA-1
chr7_3 exon 21224775 21224872 21224775 ID=Msa1096580-mRNA-1:exon:4604;Parent=Msa1096580-mRNA-1
chr7_3 exon 21224973 21225137 21224973 ID=Msa1096580-mRNA-1:exon:4605;Parent=Msa1096580-mRNA-1
chr7_3 exon 21226240 21226345 21226240 ID=Msa1096580-mRNA-1:exon:4606;Parent=Msa1096580-mRNA-1
chr7_3 exon 21226456 21226999 21226456 ID=Msa1096580-mRNA-1:exon:4607;Parent=Msa1096580-mRNA-1
chr7_3 exon 21227114 21227208 21227114 ID=Msa1096580-mRNA-1:exon:4608;Parent=Msa1096580-mRNA-1
chr7_3 exon 21227408 21227653 21227408 ID=Msa1096580-mRNA-1:exon:4609;Parent=Msa1096580-mRNA-1
chr7_3 exon 21227780 21227894 21227780 ID=Msa1096580-mRNA-1:exon:4610;Parent=Msa1096580-mRNA-1
chr7_3 exon 21228080 21228293 21228080 ID=Msa1096580-mRNA-1:exon:4611;Parent=Msa1096580-mRNA-1
chr7_3 exon 21228513 21229045 21228513 ID=Msa1096580-mRNA-1:exon:4612;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21224374 21224454 21224374 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21224564 21224673 21224564 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21224775 21224872 21224775 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21224973 21225137 21224973 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21226240 21226345 21226240 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21226456 21226999 21226456 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21227114 21227208 21227114 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21227408 21227653 21227408 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21227780 21227894 21227780 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21228080 21228293 21228080 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
chr7_3 CDS 21228513 21229045 21228513 ID=Msa1096580-mRNA-1:cds;Parent=Msa1096580-mRNA-1
Gene Sequence

>Msa1096580

ATGTGGTCTTCCAAAAAGCTTCTCTTGTTCCTGTTCTTACTTTTTACTACTTTGTTTCAATCATCATCTGCAGTGAAAAAATCTTACATAGTATATTTGGGATCACACGAGCATGGTGAAGGAGTTACTGAAGCCGATTTTGACCGAGTTATCGATACTCATCATGAATTCCTTCAATCATACGTGGGAAGCCATGAGAAAGCAAAAGAGGCAATAATATATTCATACACAAAGAATATCAATGGATTTGCTGCTTTACTGGAAGAGAAAGAAGCTGCTGACATTGCAGAGCATCCAAACGTTGTGTCAGTGTTGTTAAACCGAGGAAGAAAGTTACACACTACACACTCGTGGGAATTCATGTCAATGGAACACAATGGTGTGGCTCCTTCTCATTCCCTCTTTAGAAAAGCAAGATACGGTGAAGATGTTATTATTGGGAATCTTGATTCTGGTGTATGGCCAGAATCTCCAAGCTTTAGAGATGAAGGGATAGGGCCCATTCCCTCAAGGTGGAAAGGAATTTGTCAGAATGATCACACAGACTTCCGTTGTAACAGGAAGCTTATAGGAGCAAGATACTTCAATAAAGGTTATGCTACCTATGCAGGGTCAGAGGTGCTACAAAACGGCACACTTGATACTCCACGAGACAATGCAGGTCATGGATCTCACACACTATCAACATTAGGAGGAAACTTTGTTTCCGGAGCTAATTTTGTTGGCTTAGGCAACGGAACTGCCAAAGGTGGCTCTCCCAAAGCAAGAGTTGCTGCTTACAAAGTCTGTTGGCCACCAATTGATGACAACGAATGCTTTGATGCTGATATCATGGCAGCCTTTGATATGGCTATTCATGATGGAGTTGATGTTCTTTCCATATCTCTTGGAAGTCGTGCTGTTGATTACTTTGATGATGCTCTTTCAATTGCTGCATTTCATGCTGTTAAGAAAGGCATCACTGTGTTGTGTTCAGCTGGAAATTCTGGACCAACATTTGGAACTGTTTCAAATGTTGCACCTTGGATATTAACTGTTGCTGCAAGTACCTTAGATAGAGAGTTTGATACTGTTGTTCAACTCCATAATGGACAACACTTTAAGGGAGCTAGCCTTTCTACAGCTTTGCCAGAAAACAAGCTTTATCCACTCATTACTGCTGCTGAGGCAAAATTGGCAGAAGCACCGGTTGAAAACGCTACTCTATGTATGAATGGAACAATTGACCCCGAGAAAGCAAGGGGCCGAATATTGGTTTGTCTTAGAGGTATTAATTTGAAAGTGGAAAAGAGTATTGTTGCTTTGGAGGCTGAAGCAGTTGGAATGATTCTTTGTAATGATCGGTCTCATGGCAAACAGCTTACTGCTGATCCTCATTTGCTGCCTGCAGCACATATTACTTATGAAGATGGTGTTGCTGTCTTTGCCTACATCAATTCAACCAAAAATCCACTAGGATATATTCATCCACCCACAACAAAGTTGAACATAAAACCTTCTCCAAGCATGGCGGCTTTCTCCTCTAGAGGGCCTAACACAATCACACCAGAGATCCTCAAGCCGGATGTAACCGCACCTGGTGTGAACATTATTGCTGCCTACTCAGGAGCGGTTAGTCCCACAAAATTGGACTCTGATAAACGTAGGGTTCCTTTCATAACCATGTCTGGAACATCCATGTCATGCCCTCATGTGGCTGGAGTCGTTGGCCTTCTTAAGACTCTCCACCCCAACTGGAGTCCATCAGCTATTAAATCTGCAATCATGACAACTGCTAGGACAAGGGACAACACTGTTAAACCTATCGTTGATGATACTAATGTCAAGGCAACACCATTTGACTACGGTTCTGGTCACATAAGACCAAATCGTGCCATGGATCCTGGTTTGGTCTATGAGTTAAACATCAATGATTACATAGACTTTCTTTGTTTCTTAGGTTATAACCAAACACAAATTAGCATGTTCTCCGGTACTAATCATCATTGTGATGGTATAAACATCCTGGATTTCAACTATCCTACAATAACAATACCTATACTCTATGGGTCAGTTACTTTGAGTCGGAAGCTTAAAAATGTTGGACCACCAGGCACATACACCGCAAGCCTCCGTGTACCTGCTGGACTTTCGATATCAGTGCAGCCTAAGAGGTTGAAATTTGACAAAATTGGTGAAGAGAAGAGTTTTAGTTTGACAATTGAAGTTACTAGATCAGGTGGGGCTACTGTATTTGGAGGACTAACTTGGTCAGATGGCACACACTATGTTAGGAGTCCAATTACAGTTGGAGGAGTTAAAGGTTAG
Protein sequence

>Msa1096580

MWSSKKLLLFLFLLFTTLFQSSSAVKKSYIVYLGSHEHGEGVTEADFDRVIDTHHEFLQSYVGSHEKAKEAIIYSYTKNINGFAALLEEKEAADIAEHPNVVSVLLNRGRKLHTTHSWEFMSMEHNGVAPSHSLFRKARYGEDVIIGNLDSGVWPESPSFRDEGIGPIPSRWKGICQNDHTDFRCNRKLIGARYFNKGYATYAGSEVLQNGTLDTPRDNAGHGSHTLSTLGGNFVSGANFVGLGNGTAKGGSPKARVAAYKVCWPPIDDNECFDADIMAAFDMAIHDGVDVLSISLGSRAVDYFDDALSIAAFHAVKKGITVLCSAGNSGPTFGTVSNVAPWILTVAASTLDREFDTVVQLHNGQHFKGASLSTALPENKLYPLITAAEAKLAEAPVENATLCMNGTIDPEKARGRILVCLRGINLKVEKSIVALEAEAVGMILCNDRSHGKQLTADPHLLPAAHITYEDGVAVFAYINSTKNPLGYIHPPTTKLNIKPSPSMAAFSSRGPNTITPEILKPDVTAPGVNIIAAYSGAVSPTKLDSDKRRVPFITMSGTSMSCPHVAGVVGLLKTLHPNWSPSAIKSAIMTTARTRDNTVKPIVDDTNVKATPFDYGSGHIRPNRAMDPGLVYELNINDYIDFLCFLGYNQTQISMFSGTNHHCDGINILDFNYPTITIPILYGSVTLSRKLKNVGPPGTYTASLRVPAGLSISVQPKRLKFDKIGEEKSFSLTIEVTRSGGATVFGGLTWSDGTHYVRSPITVGGVKG*