AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1187940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1187940 MtrunA17_Chr8g0389491 71.074 121 35 0 208 328 82 202 8.43e-54 177
Msa1187940 MtrunA17_Chr8g0352231 57.868 197 53 3 99 268 644 837 3.68e-44 164
Msa1187940 MtrunA17_Chr8g0355041 61.475 122 25 2 2 101 27 148 7.60e-39 148
Msa1187940 MtrunA17_Chr6g0485881 86.747 83 11 0 328 410 555 637 1.77e-37 144
Msa1187940 MtrunA17_Chr3g0088821 49.419 172 60 2 108 252 653 824 4.39e-32 129
Msa1187940 MtrunA17_Chr6g0465401 63.542 96 29 2 248 343 1 90 1.02e-28 108
Msa1187940 MtrunA17_Chr1g0176351 76.119 67 16 0 207 273 19 85 2.65e-27 108
Msa1187940 MtrunA17_Chr7g0267731 43.386 189 73 4 107 268 564 745 1.21e-25 109
Msa1187940 MtrunA17_Chr3g0137951 50.980 102 48 1 105 206 660 759 2.41e-18 87.8
Msa1187940 MtrunA17_Chr2g0328241 66.154 65 19 2 212 273 24 88 3.74e-17 83.6
Msa1187940 MtrunA17_Chr1g0163701 63.889 72 22 1 239 306 25 96 9.33e-17 81.6
Msa1187940 MtrunA17_Chr4g0024031 65.574 61 18 2 212 269 24 84 1.64e-15 78.6
Msa1187940 MtrunA17_Chr2g0328251 44.762 105 53 3 208 307 20 124 3.26e-15 77.8
Msa1187940 MtrunA17_Chr1g0201731 33.333 168 80 4 112 252 682 844 1.53e-13 72.8
Msa1187940 MtrunA17_Chr8g0383701 43.662 71 38 1 136 206 702 770 1.81e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1187940 AT5G05170.1 46.193 197 75 4 99 268 632 824 2.19e-34 136
Msa1187940 AT1G60560.3 53.279 122 35 2 2 101 25 146 1.31e-32 128
Msa1187940 AT1G60560.2 53.279 122 35 2 2 101 25 146 1.83e-32 128
Msa1187940 AT1G60560.1 53.279 122 35 2 2 101 25 146 3.74e-32 129
Msa1187940 AT2G25540.1 42.157 102 57 1 105 206 634 733 1.02e-15 80.1
Msa1187940 AT4G32410.1 52.174 69 31 1 138 206 687 753 7.56e-15 77.4
Msa1187940 AT5G44030.2 49.351 77 38 1 130 206 675 750 9.11e-15 77.0
Msa1187940 AT5G44030.3 49.351 77 38 1 130 206 367 442 9.41e-15 76.6
Msa1187940 AT5G44030.1 49.351 77 38 1 130 206 646 721 1.07e-14 76.6
Msa1187940 AT5G64740.1 32.143 168 84 4 112 252 667 831 3.90e-12 68.9

Find 66 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTATGTCTAGTCTTATT+TGG 0.120158 8_1:-27919275 None:intergenic
GCCTCCTTCAAAAGAGTTTC+TGG 0.134508 8_1:-27917716 None:intergenic
ATGTTGACTTTGATTAATTT+TGG 0.175529 8_1:+27909146 Msa1187940:CDS
AAGCATTAAATCTATCATAT+TGG 0.289249 8_1:-27909196 None:intergenic
CACTTTGTGATGGAGAAAAT+AGG 0.299950 8_1:+27919123 Msa1187940:CDS
ATCATCCTTGTGCTCCTTCA+AGG 0.304986 8_1:-27909297 None:intergenic
GATATTGAAGAAGGAGTAGA+AGG 0.310085 8_1:+27917345 Msa1187940:CDS
TTTGAGACATGCTTTCAAAA+TGG 0.353318 8_1:+27918896 Msa1187940:CDS
ACTTTGTGATGGAGAAAATA+GGG 0.355897 8_1:+27919124 Msa1187940:CDS
AGCATTAAATCTATCATATT+GGG 0.363421 8_1:-27909195 None:intergenic
AGAGGAAAGAAACAAAATAT+TGG 0.395219 8_1:+27909272 Msa1187940:CDS
CATCATCAACTAAAGAATCT+TGG 0.429784 8_1:-27919307 None:intergenic
AAGAGGAGATCGACGCTGCT+TGG 0.431615 8_1:+27919003 Msa1187940:CDS
TGCTAGACCTCAACCAATGC+AGG 0.439438 8_1:+27915947 Msa1187940:CDS
AGGTCACAAGCTTCCTCAGC+AGG 0.444090 8_1:-27919368 None:intergenic
AACTGTGTCGATCTTCAGTC+TGG 0.457331 8_1:+27917320 Msa1187940:CDS
ACAAAATATTGGCACCTTGA+AGG 0.459951 8_1:+27909283 Msa1187940:CDS
AATTCTTATGCCGTTGAAAG+AGG 0.471956 8_1:+27918986 Msa1187940:CDS
TAATCTTTGTTGTAACAAAA+CGG 0.481557 8_1:-27918858 None:intergenic
AGTTCAAAATATAGTAAGAA+AGG 0.484482 8_1:+27917261 Msa1187940:CDS
ATTCAATAAAAGCAGCTGAT+TGG 0.485805 8_1:-27917652 None:intergenic
GTCTTCTCAATACTAACAAC+AGG 0.493869 8_1:-27919083 None:intergenic
GAGGACCTTGAGAAAAGATT+CGG 0.496429 8_1:+27917629 Msa1187940:CDS
ACTCAGTTTCATATCGATAG+AGG 0.496789 8_1:+27909254 Msa1187940:CDS
CTCAATACTAACAACAGGTT+CGG 0.502695 8_1:-27919078 None:intergenic
TATCGATATGAAACTGAGTT+GGG 0.505477 8_1:-27909250 None:intergenic
ATGTCTAGTCTTATTTGGAT+AGG 0.507080 8_1:-27919270 None:intergenic
CTATCGATATGAAACTGAGT+TGG 0.510423 8_1:-27909251 None:intergenic
TAGATATTACACAAAGTTGA+AGG 0.519590 8_1:+27918791 Msa1187940:intron
GGCAGATAACTCGCGTAAGA+CGG 0.522278 8_1:+27918917 Msa1187940:CDS
CACAGACGTCGAAAACGCTT+GGG 0.530092 8_1:-27919030 None:intergenic
ACTAGACATAATTGCGAAGA+GGG 0.530232 8_1:+27919284 Msa1187940:CDS
CACATGGTTTCACTTTGTGA+TGG 0.540604 8_1:+27919113 Msa1187940:CDS
GTACAACCCTGCATTGGTTG+AGG 0.550360 8_1:-27915954 None:intergenic
TCTGTGTGAAGGTACCTAGT+TGG 0.561768 8_1:+27915895 Msa1187940:intron
ACAAGCTTCCTCAGCAGGGA+TGG 0.565314 8_1:-27919363 None:intergenic
ATGTCTCAAAAGGTCGGTCA+AGG 0.571507 8_1:-27918883 None:intergenic
AGTCTGGAGGATATTGAAGA+AGG 0.572692 8_1:+27917336 Msa1187940:CDS
CAGAGTGATGACAGAAACCC+AGG 0.574768 8_1:-27917219 None:intergenic
GAAAGCATGTCTCAAAAGGT+CGG 0.580997 8_1:-27918889 None:intergenic
TTTCTGTCATCACTCTGTGG+TGG 0.582459 8_1:+27917225 Msa1187940:CDS
GAATCTACGCTGATGGAGAA+TGG 0.583472 8_1:+27917671 Msa1187940:CDS
TACACAATAAGCACAAGTGA+TGG 0.584984 8_1:-27916004 None:intergenic
TGAGAAGACTGGTGAGCACA+TGG 0.589881 8_1:+27919097 Msa1187940:CDS
GTTGTTAGTATTGAGAAGAC+TGG 0.592091 8_1:+27919086 Msa1187940:CDS
TGACAGGTACAACCCTGCAT+TGG 0.592991 8_1:-27915960 None:intergenic
GAGGAAGCTTGTGACCTCAC+CGG 0.594168 8_1:+27919374 Msa1187940:CDS
ACGTTTGACAACAAAATGAC+AGG 0.594799 8_1:-27915976 None:intergenic
AGACTGAAGATCGACACAGT+TGG 0.615352 8_1:-27917318 None:intergenic
TGGCACCTTGAAGGAGCACA+AGG 0.616593 8_1:+27909292 Msa1187940:CDS
TTAAGTCGATATCTCCAACT+AGG 0.621727 8_1:-27915909 None:intergenic
GGGTTTCTGTCATCACTCTG+TGG 0.638042 8_1:+27917222 Msa1187940:CDS
GAAACAAGTTTAACTGACAC+CGG 0.639197 8_1:-27919393 None:intergenic
GACTAGACATAATTGCGAAG+AGG 0.643960 8_1:+27919283 Msa1187940:CDS
AATTGATACCATCCCTGCTG+AGG 0.644195 8_1:+27919355 Msa1187940:CDS
GCTAGACCTCAACCAATGCA+GGG 0.649154 8_1:+27915948 Msa1187940:CDS
TGTGTCGATCTTCAGTCTGG+AGG 0.650998 8_1:+27917323 Msa1187940:CDS
GCGTCGATCTCCTCTTTCAA+CGG 0.670207 8_1:-27918996 None:intergenic
GGTCACAAGCTTCCTCAGCA+GGG 0.670761 8_1:-27919367 None:intergenic
AACAGAAGATCTCATCGTGG+AGG 0.674719 8_1:+27919235 Msa1187940:CDS
AGCACAGCGTATGTCACGAG+AGG 0.678396 8_1:+27917610 Msa1187940:CDS
GTTTCTGGAGTAGCACTCTG+AGG 0.680321 8_1:-27917701 None:intergenic
AAGTTTAACTGACACCGGTG+AGG 0.700035 8_1:-27919388 None:intergenic
TCTACGCTGATGGAGAATGG+TGG 0.763159 8_1:+27917674 Msa1187940:CDS
AAATGCTGAACACAATGACG+AGG 0.775093 8_1:+27909169 Msa1187940:CDS
AGTAACAGAAGATCTCATCG+TGG 0.778770 8_1:+27919232 Msa1187940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAAATATTAAGTTGT+GGG - chr8_1:27914490-27914509 None:intergenic 10.0%
!!! ATAAAATAAATATTAAGTTG+TGG - chr8_1:27914491-27914510 None:intergenic 10.0%
!!! CATTTTTTATTATTAAAGAA+TGG - chr8_1:27915792-27915811 None:intergenic 10.0%
!!! TATTTCAAACTTTAAATTTT+TGG + chr8_1:27916629-27916648 Msa1187940:intron 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG + chr8_1:27917889-27917908 Msa1187940:intron 10.0%
!!! AGATTTAATGCTTTTATAAT+TGG + chr8_1:27909206-27909225 Msa1187940:CDS 15.0%
!! AAAGAGTAAAAAATAAATTC+AGG - chr8_1:27909635-27909654 None:intergenic 15.0%
!!! ATTTAAGAAATTTTTACGTT+GGG - chr8_1:27911665-27911684 None:intergenic 15.0%
!!! AATTTAAGAAATTTTTACGT+TGG - chr8_1:27911666-27911685 None:intergenic 15.0%
!!! TTTTATGAGATTTTATATTG+AGG - chr8_1:27911844-27911863 None:intergenic 15.0%
!! TTTCACTAAACAATAATATT+AGG + chr8_1:27912062-27912081 Msa1187940:intron 15.0%
!! TAGAAATAAATAAGATTATG+AGG - chr8_1:27914168-27914187 None:intergenic 15.0%
!! GTGTATTAATATTATTAAGT+GGG - chr8_1:27914209-27914228 None:intergenic 15.0%
!!! AATATATTTGTTATTTTGTG+TGG - chr8_1:27914356-27914375 None:intergenic 15.0%
!!! AAAATAAATATTAAGTTGTG+GGG - chr8_1:27914489-27914508 None:intergenic 15.0%
!!! ATTTTAAAGAAATAAACAAC+TGG - chr8_1:27916293-27916312 None:intergenic 15.0%
!! AAAAAAAATAGTTTGAACTA+TGG - chr8_1:27917398-27917417 None:intergenic 15.0%
!!! TTTAATTTTAGCAATTGTTA+TGG + chr8_1:27917553-27917572 Msa1187940:intron 15.0%
!!! TTCATTAGTTTTTTTTTGAA+AGG - chr8_1:27917940-27917959 None:intergenic 15.0%
!! TGAATAAAATAAAAAACCAA+AGG + chr8_1:27917956-27917975 Msa1187940:intron 15.0%
!!! TATAGTTTTATTTATTGGAT+CGG - chr8_1:27918106-27918125 None:intergenic 15.0%
!!! GTTTGTATAGTTTTATTTAT+TGG - chr8_1:27918111-27918130 None:intergenic 15.0%
!!! ATAGAAAATTCTAGAAAATT+AGG - chr8_1:27918222-27918241 None:intergenic 15.0%
!!! TGTTTTCAATTTGTTATTTT+AGG + chr8_1:27918244-27918263 Msa1187940:intron 15.0%
!!! ATGTTGACTTTGATTAATTT+TGG + chr8_1:27909146-27909165 Msa1187940:CDS 20.0%
!! AGCATTAAATCTATCATATT+GGG - chr8_1:27909198-27909217 None:intergenic 20.0%
!! AAGCATTAAATCTATCATAT+TGG - chr8_1:27909199-27909218 None:intergenic 20.0%
!!! TTAATGTTTTCTTACTCTTT+TGG + chr8_1:27909394-27909413 Msa1187940:intron 20.0%
!!! CTAGAACATTTTTTTTACAA+GGG - chr8_1:27909545-27909564 None:intergenic 20.0%
!! AACAAAATGTCATAAAAGTA+AGG - chr8_1:27909680-27909699 None:intergenic 20.0%
!!! CAATGATGAAATTTTCTAAT+AGG - chr8_1:27909789-27909808 None:intergenic 20.0%
!! TAAAAGTAACCCTTAAAATA+TGG + chr8_1:27910354-27910373 Msa1187940:intron 20.0%
!!! AGATTTGTTCCATATTTTAA+GGG - chr8_1:27910366-27910385 None:intergenic 20.0%
!!! AAGATTTGTTCCATATTTTA+AGG - chr8_1:27910367-27910386 None:intergenic 20.0%
!! TTTCAGAATGAAAGATTATA+AGG - chr8_1:27911319-27911338 None:intergenic 20.0%
!! TTATGTAGATGATATTCTTA+TGG - chr8_1:27911514-27911533 None:intergenic 20.0%
!! TAAGAATATCATCTACATAA+AGG + chr8_1:27911514-27911533 Msa1187940:intron 20.0%
!! GTTATGATAAAAATACTACA+CGG - chr8_1:27913207-27913226 None:intergenic 20.0%
!!! TTCGAATTTAAAATGAAAAC+TGG - chr8_1:27913338-27913357 None:intergenic 20.0%
!!! TTCAAGTTTTATATGGATTT+GGG - chr8_1:27913681-27913700 None:intergenic 20.0%
!!! GTTTTAGTTCAAGTTTTATA+TGG - chr8_1:27913688-27913707 None:intergenic 20.0%
!! GGTGTATTAATATTATTAAG+TGG - chr8_1:27914210-27914229 None:intergenic 20.0%
!!! ATATGCTATTATGTGTTATT+TGG - chr8_1:27914231-27914250 None:intergenic 20.0%
!! TAAAAGTAACCCTTAAAATA+TGG + chr8_1:27910354-27910373 Msa1187940:intron 20.0%
!!! AGATTTGTTCCATATTTTAA+GGG - chr8_1:27910366-27910385 None:intergenic 20.0%
!!! AAGATTTGTTCCATATTTTA+AGG - chr8_1:27910367-27910386 None:intergenic 20.0%
!! GTAAGAGTTAACTTAAAATT+AGG - chr8_1:27915607-27915626 None:intergenic 20.0%
!!! TTATTTCTTTAAAATGAGTG+TGG + chr8_1:27916298-27916317 Msa1187940:intron 20.0%
!! AAATAAACTCAACTATAGAA+CGG - chr8_1:27916328-27916347 None:intergenic 20.0%
!! TTGTTTGCATTAGAAATATT+TGG + chr8_1:27916367-27916386 Msa1187940:intron 20.0%
!! TTGTTATCAAAAGAAAACAT+TGG - chr8_1:27916472-27916491 None:intergenic 20.0%
!!! TTTCTTTTGATAACAAACAT+TGG + chr8_1:27916476-27916495 Msa1187940:intron 20.0%
!!! GTTAGACTTTTGATTTTTAA+CGG + chr8_1:27916498-27916517 Msa1187940:intron 20.0%
!!! TCGTAAAATTGATTCTAATT+TGG - chr8_1:27917027-27917046 None:intergenic 20.0%
!! AGTTCAAAATATAGTAAGAA+AGG + chr8_1:27917261-27917280 Msa1187940:CDS 20.0%
!! AAATACCTAAATCATACTTT+AGG - chr8_1:27917536-27917555 None:intergenic 20.0%
!!! ATTGTTATGGATATTTTTTC+AGG + chr8_1:27917566-27917585 Msa1187940:intron 20.0%
!!! TAATCTTTGTTGTAACAAAA+CGG - chr8_1:27918861-27918880 None:intergenic 20.0%
!! AAAAAATTAAAGCAAGAAGA+AGG + chr8_1:27919152-27919171 Msa1187940:CDS 20.0%
!! AAAAATTAAAGCAAGAAGAA+GGG + chr8_1:27919153-27919172 Msa1187940:CDS 20.0%
! AGAGGAAAGAAACAAAATAT+TGG + chr8_1:27909272-27909291 Msa1187940:CDS 25.0%
! TGAATAAAGTGTAAGAATGA+AGG - chr8_1:27909354-27909373 None:intergenic 25.0%
!!! GCTAGAACATTTTTTTTACA+AGG - chr8_1:27909546-27909565 None:intergenic 25.0%
!! GCTTTGTTATATTGTGTTTA+TGG + chr8_1:27909721-27909740 Msa1187940:intron 25.0%
! ATAAAACAGCAAGAGATTAA+AGG + chr8_1:27909992-27910011 Msa1187940:intron 25.0%
! AGAAACTCATATCATTATAG+TGG - chr8_1:27910097-27910116 None:intergenic 25.0%
! TTCTTTACAAAGAGATATTG+AGG + chr8_1:27910113-27910132 Msa1187940:intron 25.0%
! TCTTTACAAAGAGATATTGA+GGG + chr8_1:27910114-27910133 Msa1187940:intron 25.0%
!! AAAAAGTGTGTAGAAAAACA+GGG - chr8_1:27910313-27910332 None:intergenic 25.0%
!! TTTTCCAGAACCTAATTTTA+AGG + chr8_1:27910529-27910548 Msa1187940:intron 25.0%
! GTAAGAGTTACCTTAAAATT+AGG - chr8_1:27910542-27910561 None:intergenic 25.0%
!! GAATGATGAATTTAAGATGA+AGG - chr8_1:27911448-27911467 None:intergenic 25.0%
!! AAATTTTTACGTTGGGAAAA+CGG - chr8_1:27911658-27911677 None:intergenic 25.0%
!! CAGAGTTTTTCATCATAAAA+CGG + chr8_1:27911690-27911709 Msa1187940:intron 25.0%
! GATTCATAAAGTAATACGTA+AGG + chr8_1:27911889-27911908 Msa1187940:intron 25.0%
! TATGATGATTGATTATGAAG+TGG - chr8_1:27912380-27912399 None:intergenic 25.0%
! GAAACGTTTAAACAAACTTT+GGG - chr8_1:27913642-27913661 None:intergenic 25.0%
! AGAAACGTTTAAACAAACTT+TGG - chr8_1:27913643-27913662 None:intergenic 25.0%
!!! GTTCAAGTTTTATATGGATT+TGG - chr8_1:27913682-27913701 None:intergenic 25.0%
!! AATGGTGATTTTTGTTGAAA+GGG - chr8_1:27913712-27913731 None:intergenic 25.0%
!! AAATGGTGATTTTTGTTGAA+AGG - chr8_1:27913713-27913732 None:intergenic 25.0%
!! TGAAGGTTTTCATGAAAAAT+GGG - chr8_1:27913738-27913757 None:intergenic 25.0%
!! TTGAAGGTTTTCATGAAAAA+TGG - chr8_1:27913739-27913758 None:intergenic 25.0%
! TGAATTTATGTTGTTCTTGA+AGG - chr8_1:27913755-27913774 None:intergenic 25.0%
! TTTGAGAGATTGAAGAATTA+GGG - chr8_1:27913885-27913904 None:intergenic 25.0%
!!! TTTTGAGAGATTGAAGAATT+AGG - chr8_1:27913886-27913905 None:intergenic 25.0%
! GATTAGATTTAACAAGTTGT+AGG - chr8_1:27913915-27913934 None:intergenic 25.0%
! GGTTATAAATAAGAGAAGTT+AGG - chr8_1:27914106-27914125 None:intergenic 25.0%
!!! GAAGAGGTATATTTGTTATT+TGG - chr8_1:27914289-27914308 None:intergenic 25.0%
!!! ATATTTGTTATTCAGTGAAG+AGG - chr8_1:27914305-27914324 None:intergenic 25.0%
! GTGGAAATATATATGTTATC+TGG - chr8_1:27914337-27914356 None:intergenic 25.0%
! TGTTGAAGAAATCTTTGTAT+GGG - chr8_1:27914698-27914717 None:intergenic 25.0%
! TTGTTGAAGAAATCTTTGTA+TGG - chr8_1:27914699-27914718 None:intergenic 25.0%
!!! TTGTTCTATAAGGGTATTTA+TGG - chr8_1:27914853-27914872 None:intergenic 25.0%
! GGTAAAACATTGTTCTATAA+GGG - chr8_1:27914862-27914881 None:intergenic 25.0%
! TGGTAAAACATTGTTCTATA+AGG - chr8_1:27914863-27914882 None:intergenic 25.0%
! ATAAAACAACAAGAGATGAA+AGG + chr8_1:27915009-27915028 Msa1187940:intron 25.0%
! AGAAACTCATATCATTATAG+TGG - chr8_1:27910097-27910116 None:intergenic 25.0%
! TTCTTTACAAAGAGATATTG+AGG + chr8_1:27910113-27910132 Msa1187940:intron 25.0%
! TCTTTACAAAGAGATATTGA+GGG + chr8_1:27910114-27910133 Msa1187940:intron 25.0%
!! AAAAAGTGTGTAGAAAAACA+GGG - chr8_1:27910313-27910332 None:intergenic 25.0%
! GTTAACTTAAAATTAGGTTC+TGG - chr8_1:27915601-27915620 None:intergenic 25.0%
! AACAATGACAACATAACTAT+TGG - chr8_1:27915692-27915711 None:intergenic 25.0%
! TGTTAAGAACAGTAATTGTT+AGG + chr8_1:27915708-27915727 Msa1187940:intron 25.0%
! GAACAAAATTCAACATAACT+TGG - chr8_1:27915877-27915896 None:intergenic 25.0%
! CATGTGAACAATAAAACTAA+AGG - chr8_1:27916065-27916084 None:intergenic 25.0%
! TAGCTAAGGAATATTGTTAT+AGG + chr8_1:27916430-27916449 Msa1187940:intron 25.0%
!!! CAAACTTTAAATTTTTGGTG+TGG + chr8_1:27916634-27916653 Msa1187940:intron 25.0%
! CATTATATAAAGAGTTGTTC+TGG - chr8_1:27916682-27916701 None:intergenic 25.0%
!!! GAAAGTATTTTTATGAAGCA+AGG - chr8_1:27916744-27916763 None:intergenic 25.0%
! GTAACAAAGAAAACTACAAA+TGG - chr8_1:27916774-27916793 None:intergenic 25.0%
! GAAAATGACAACGTTAAATA+TGG - chr8_1:27917435-27917454 None:intergenic 25.0%
! GTTAACCTAAAGTATGATTT+AGG + chr8_1:27917528-27917547 Msa1187940:intron 25.0%
! TTATGAGGATAAATCAGAAT+GGG + chr8_1:27917759-27917778 Msa1187940:intron 25.0%
! ATCATGTTAGAAAAAAGAAC+AGG - chr8_1:27918501-27918520 None:intergenic 25.0%
! TTATTATGAACCCTAATAAC+CGG - chr8_1:27918702-27918721 None:intergenic 25.0%
! TAGATATTACACAAAGTTGA+AGG + chr8_1:27918791-27918810 Msa1187940:intron 25.0%
!!! CAATTATGTCTAGTCTTATT+TGG - chr8_1:27919278-27919297 None:intergenic 25.0%
TATCGATATGAAACTGAGTT+GGG - chr8_1:27909253-27909272 None:intergenic 30.0%
!! TTGCTTGTTTAGTTTGTTTG+TGG + chr8_1:27909478-27909497 Msa1187940:intron 30.0%
TTGTGTTTATGGTAGATCAT+TGG + chr8_1:27909732-27909751 Msa1187940:intron 30.0%
TATGGTAGATCATTGGAAAT+TGG + chr8_1:27909739-27909758 Msa1187940:intron 30.0%
TTATAATCGTGTGTAACAGT+AGG - chr8_1:27909820-27909839 None:intergenic 30.0%
! GCATCAAGTTTTTATTAGTG+TGG - chr8_1:27909910-27909929 None:intergenic 30.0%
AATACCAAGCAATCAAATCA+AGG + chr8_1:27909942-27909961 Msa1187940:intron 30.0%
ATACCAAGCAATCAAATCAA+GGG + chr8_1:27909943-27909962 Msa1187940:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG - chr8_1:27910092-27910111 None:intergenic 30.0%
GGTTTATAGAGAATTTCTCT+TGG - chr8_1:27910266-27910285 None:intergenic 30.0%
!! ATAAACCCTAGTTTGTTTGT+TGG + chr8_1:27910279-27910298 Msa1187940:intron 30.0%
! GAAAAAGTGTGTAGAAAAAC+AGG - chr8_1:27910314-27910333 None:intergenic 30.0%
!!! ACACTTTTTCATCTGATACA+AGG + chr8_1:27910324-27910343 Msa1187940:intron 30.0%
GTTACCTTAAAATTAGGTTC+TGG - chr8_1:27910536-27910555 None:intergenic 30.0%
GTAGATCATGATGGTTAAAT+TGG - chr8_1:27910599-27910618 None:intergenic 30.0%
! AAAGGTATGATTGGAGAAAT+GGG - chr8_1:27910825-27910844 None:intergenic 30.0%
! ATATGGTTGAAAGGTATGAT+TGG - chr8_1:27910834-27910853 None:intergenic 30.0%
AATCATACCTTTCAACCATA+TGG + chr8_1:27910833-27910852 Msa1187940:intron 30.0%
GGATTTGTGTTTACTTTGTT+CGG - chr8_1:27910954-27910973 None:intergenic 30.0%
GACACTAGAAAATCTTTATC+AGG - chr8_1:27910975-27910994 None:intergenic 30.0%
ATGCAATAAGTGTGATAAGT+CGG - chr8_1:27911143-27911162 None:intergenic 30.0%
ACTTATCACACTTATTGCAT+AGG + chr8_1:27911143-27911162 Msa1187940:intron 30.0%
! TTGAAGCATCATGTATGATA+TGG - chr8_1:27911190-27911209 None:intergenic 30.0%
ATGAAAGATTATAAGGTCGT+TGG - chr8_1:27911312-27911331 None:intergenic 30.0%
! GAATTTAAGATGAAGGATCT+TGG - chr8_1:27911441-27911460 None:intergenic 30.0%
TATCATCTACATAAAGGAGA+AGG + chr8_1:27911520-27911539 Msa1187940:intron 30.0%
! AATTTTTACGTTGGGAAAAC+GGG - chr8_1:27911657-27911676 None:intergenic 30.0%
! TATGTTGTTGAACGTTTTGA+AGG - chr8_1:27911763-27911782 None:intergenic 30.0%
TTGGCAACTTAAAGAATCTT+TGG + chr8_1:27911810-27911829 Msa1187940:intron 30.0%
TTAAAGAATCTTTGGCACAA+GGG + chr8_1:27911818-27911837 Msa1187940:intron 30.0%
TATGAATCTTTCGAGAATTG+AGG - chr8_1:27911877-27911896 None:intergenic 30.0%
! CAAGTAACCTAGATTAGTTA+CGG - chr8_1:27911995-27912014 None:intergenic 30.0%
TTGAGCATAAATATACTCCT+AGG + chr8_1:27912608-27912627 Msa1187940:intron 30.0%
TGAGCATAAATATACTCCTA+GGG + chr8_1:27912609-27912628 Msa1187940:intron 30.0%
GCATACTCATTTAAAGATGA+GGG - chr8_1:27912716-27912735 None:intergenic 30.0%
TGCATACTCATTTAAAGATG+AGG - chr8_1:27912717-27912736 None:intergenic 30.0%
CATCTTTAAATGAGTATGCA+TGG + chr8_1:27912717-27912736 Msa1187940:intron 30.0%
! CATATTTTCATGTCAAACCA+AGG + chr8_1:27913048-27913067 Msa1187940:intron 30.0%
ATGATAAAAATACTACACGG+AGG - chr8_1:27913204-27913223 None:intergenic 30.0%
TTTGACGTGAAAATGATCTT+TGG - chr8_1:27913237-27913256 None:intergenic 30.0%
!!! TAATTTTGTTAGCTTTCCAG+TGG - chr8_1:27913266-27913285 None:intergenic 30.0%
!! ATCAATACAGAATTGGTCTT+AGG - chr8_1:27913310-27913329 None:intergenic 30.0%
!! GGTATTGATCAATACAGAAT+TGG - chr8_1:27913317-27913336 None:intergenic 30.0%
! TAGGTCACTGTGAATTTTTA+TGG - chr8_1:27913378-27913397 None:intergenic 30.0%
GATATACAGAACTTGAGTTA+TGG - chr8_1:27913416-27913435 None:intergenic 30.0%
AAACACGAAAGTTGTAAGTA+TGG - chr8_1:27913477-27913496 None:intergenic 30.0%
!!! CACACATTTCAGTTTTGAAT+TGG - chr8_1:27913510-27913529 None:intergenic 30.0%
! GGATTCAAAATTGGGATTTT+GGG - chr8_1:27913601-27913620 None:intergenic 30.0%
TTCATGAAAAATGGGTCAAA+TGG - chr8_1:27913730-27913749 None:intergenic 30.0%
TCTATGATTATGATTACCCA+TGG + chr8_1:27913783-27913802 Msa1187940:intron 30.0%
!! ATCAGTTTTTGGAGAAAACA+AGG - chr8_1:27914060-27914079 None:intergenic 30.0%
TGTAAGAGAAATTAGATGAG+GGG - chr8_1:27914127-27914146 None:intergenic 30.0%
GTGTAAGAGAAATTAGATGA+GGG - chr8_1:27914128-27914147 None:intergenic 30.0%
! TGAGGAAAAGAGTAATTTTG+AGG - chr8_1:27914150-27914169 None:intergenic 30.0%
! TTATCTTCTACGAAACCTTT+TGG + chr8_1:27914732-27914751 Msa1187940:intron 30.0%
ATCTATATGCAACAACCAAA+AGG - chr8_1:27914750-27914769 None:intergenic 30.0%
! ATAGAACAATGTTTTACCAC+CGG + chr8_1:27914864-27914883 Msa1187940:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG - chr8_1:27910092-27910111 None:intergenic 30.0%
!! ATAAACCCTAGTTTGTTTGT+TGG + chr8_1:27910279-27910298 Msa1187940:intron 30.0%
! GAAAAAGTGTGTAGAAAAAC+AGG - chr8_1:27910314-27910333 None:intergenic 30.0%
!!! ACACTTTTTCATCTGATACA+AGG + chr8_1:27910324-27910343 Msa1187940:intron 30.0%
GTTAACTCTTACAGATAACA+TGG + chr8_1:27915615-27915634 Msa1187940:intron 30.0%
TCATGGGATAAAAGCTAATT+AGG - chr8_1:27915818-27915837 None:intergenic 30.0%
! AATTGTGCTCTGTATCATTT+TGG + chr8_1:27915842-27915861 Msa1187940:intron 30.0%
! TTGAATTTTGTTCTGTGTGA+AGG + chr8_1:27915884-27915903 Msa1187940:intron 30.0%
TTAGGTCTAGCATAACTTAA+AGG - chr8_1:27916033-27916052 None:intergenic 30.0%
AACTAAAGGATGATTCTCTT+AGG - chr8_1:27916051-27916070 None:intergenic 30.0%
TTGTTGAATGGATCATTACA+TGG + chr8_1:27916139-27916158 Msa1187940:intron 30.0%
!!! CAGCTGATATTGATTTTTTG+AGG + chr8_1:27916267-27916286 Msa1187940:intron 30.0%
!! TAACGGTGTCATAACAAAAA+CGG + chr8_1:27916515-27916534 Msa1187940:intron 30.0%
AAAAGACTATGACGAATACA+AGG + chr8_1:27916553-27916572 Msa1187940:intron 30.0%
GAAACTATACTTTGATCGAA+TGG - chr8_1:27916714-27916733 None:intergenic 30.0%
! TTGTAGTTTTCTTTGTTACG+TGG + chr8_1:27916775-27916794 Msa1187940:intron 30.0%
AAACTGAAACATAAAAAGCC+TGG + chr8_1:27917201-27917220 Msa1187940:CDS 30.0%
AACTGAAACATAAAAAGCCT+GGG + chr8_1:27917202-27917221 Msa1187940:CDS 30.0%
!!! ATGGATATTTTTTCAGGTTC+TGG + chr8_1:27917572-27917591 Msa1187940:intron 30.0%
ATTCAATAAAAGCAGCTGAT+TGG - chr8_1:27917655-27917674 None:intergenic 30.0%
! TTTTATTGAATCTACGCTGA+TGG + chr8_1:27917664-27917683 Msa1187940:CDS 30.0%
GTTATGAGGATAAATCAGAA+TGG + chr8_1:27917758-27917777 Msa1187940:intron 30.0%
TATGAGGATAAATCAGAATG+GGG + chr8_1:27917760-27917779 Msa1187940:intron 30.0%
ATTAAATGTAACCGCATTGT+CGG - chr8_1:27917864-27917883 None:intergenic 30.0%
!!! TTTGTTATTTTAGGCCCATT+AGG + chr8_1:27918253-27918272 Msa1187940:intron 30.0%
!!! TTGTTATTTTAGGCCCATTA+GGG + chr8_1:27918254-27918273 Msa1187940:intron 30.0%
ACAACTGTTAAGCATACATA+GGG - chr8_1:27918290-27918309 None:intergenic 30.0%
TACAACTGTTAAGCATACAT+AGG - chr8_1:27918291-27918310 None:intergenic 30.0%
AAAGCTATAAGTTGTCTCTT+AGG - chr8_1:27918315-27918334 None:intergenic 30.0%
GATAGAAACAATCTGAACAA+AGG + chr8_1:27918663-27918682 Msa1187940:intron 30.0%
!!! CATGGGTATGTTTTGATTTT+CGG - chr8_1:27918746-27918765 None:intergenic 30.0%
GTATTCCAAATCAGATTCAT+GGG - chr8_1:27918763-27918782 None:intergenic 30.0%
AGTATTCCAAATCAGATTCA+TGG - chr8_1:27918764-27918783 None:intergenic 30.0%
!! TTTTGAAAGCATGTCTCAAA+AGG - chr8_1:27918896-27918915 None:intergenic 30.0%
! TTTGAGACATGCTTTCAAAA+TGG + chr8_1:27918896-27918915 Msa1187940:CDS 30.0%
! ACTTTGTGATGGAGAAAATA+GGG + chr8_1:27919124-27919143 Msa1187940:CDS 30.0%
!! ATGTCTAGTCTTATTTGGAT+AGG - chr8_1:27919273-27919292 None:intergenic 30.0%
CATCATCAACTAAAGAATCT+TGG - chr8_1:27919310-27919329 None:intergenic 30.0%
CTATCGATATGAAACTGAGT+TGG - chr8_1:27909254-27909273 None:intergenic 35.0%
ACTCAGTTTCATATCGATAG+AGG + chr8_1:27909254-27909273 Msa1187940:CDS 35.0%
ACAAAATATTGGCACCTTGA+AGG + chr8_1:27909283-27909302 Msa1187940:CDS 35.0%
TGTGGTACAACATTCGAATT+TGG + chr8_1:27909496-27909515 Msa1187940:intron 35.0%
!! TTGCTTGTTTAGTTTGTCTG+TGG + chr8_1:27909572-27909591 Msa1187940:intron 35.0%
TCAGGACAGTAAAACGAAAA+TGG - chr8_1:27909850-27909869 None:intergenic 35.0%
!! ACATTATCGATTCCAAGTTC+AGG - chr8_1:27909868-27909887 None:intergenic 35.0%
TACCAAGCAATCAAATCAAG+GGG + chr8_1:27909944-27909963 Msa1187940:intron 35.0%
! AAGAATCTGTTTTCCCAGTT+CGG + chr8_1:27910029-27910048 Msa1187940:intron 35.0%
!! TCCTAACAGTGTTTTGTTCA+AGG + chr8_1:27910206-27910225 Msa1187940:intron 35.0%
ACCTTGAACAAAACACTGTT+AGG - chr8_1:27910210-27910229 None:intergenic 35.0%
AGAAGCCAACAAACAAACTA+GGG - chr8_1:27910287-27910306 None:intergenic 35.0%
TAGAAGCCAACAAACAAACT+AGG - chr8_1:27910288-27910307 None:intergenic 35.0%
!! TCATCACTGATTTGAAGTCA+AGG - chr8_1:27910574-27910593 None:intergenic 35.0%
GGAAAATCAGTAGATCATGA+TGG - chr8_1:27910608-27910627 None:intergenic 35.0%
TAGAGACATGATTGAGACAA+AGG - chr8_1:27910689-27910708 None:intergenic 35.0%
CATTCATTTGGCAAATCATC+AGG - chr8_1:27910757-27910776 None:intergenic 35.0%
! CTGATGATTTGCCAAATGAA+TGG + chr8_1:27910755-27910774 Msa1187940:intron 35.0%
TTGCCAAATGAATGGAACTT+TGG + chr8_1:27910763-27910782 Msa1187940:intron 35.0%
TAGCCAAAGTTCCATTCATT+TGG - chr8_1:27910769-27910788 None:intergenic 35.0%
AAGGTATGATTGGAGAAATG+GGG - chr8_1:27910824-27910843 None:intergenic 35.0%
! GAAAGGTATGATTGGAGAAA+TGG - chr8_1:27910826-27910845 None:intergenic 35.0%
! AAGTGTGATAAGTCGGTTTA+TGG - chr8_1:27911136-27911155 None:intergenic 35.0%
CTTATTGCATAGGATAAGTC+CGG + chr8_1:27911153-27911172 Msa1187940:intron 35.0%
! TGATATGGTTTGTAGTAGAC+CGG - chr8_1:27911175-27911194 None:intergenic 35.0%
!! CATCTTGCTTTTCTCTTCAT+CGG + chr8_1:27911236-27911255 Msa1187940:intron 35.0%
! CTTTTCTCTTCATCGGATTA+AGG + chr8_1:27911243-27911262 Msa1187940:intron 35.0%
AAGGTGAGTTGTTCTTATCT+CGG - chr8_1:27911371-27911390 None:intergenic 35.0%
ACTTGGTATGGATATCATGA+GGG - chr8_1:27911403-27911422 None:intergenic 35.0%
TACTTGGTATGGATATCATG+AGG - chr8_1:27911404-27911423 None:intergenic 35.0%
TACAAAGAGGATACTTGGTA+TGG - chr8_1:27911415-27911434 None:intergenic 35.0%
GGTAATACAAAGAGGATACT+TGG - chr8_1:27911420-27911439 None:intergenic 35.0%
! AGGATCTTGGTAATACAAAG+AGG - chr8_1:27911428-27911447 None:intergenic 35.0%
TCAGAAAACCAGTCTTTACT+AGG + chr8_1:27911601-27911620 Msa1187940:intron 35.0%
! ATTTTTACGTTGGGAAAACG+GGG - chr8_1:27911656-27911675 None:intergenic 35.0%
CTTAAAGAATCTTTGGCACA+AGG + chr8_1:27911817-27911836 Msa1187940:intron 35.0%
GAAAATGTTGCTCTTCGTAT+GGG - chr8_1:27912025-27912044 None:intergenic 35.0%
TGAAAATGTTGCTCTTCGTA+TGG - chr8_1:27912026-27912045 None:intergenic 35.0%
!! AGCAACATTTTCAAGCAGAA+GGG + chr8_1:27912033-27912052 Msa1187940:intron 35.0%
CATTTCATGATGATTCGAGA+TGG - chr8_1:27912544-27912563 None:intergenic 35.0%
TCATGAAATGCAAATGCATG+TGG + chr8_1:27912554-27912573 Msa1187940:intron 35.0%
TTTATGCTCAACGATGATGA+GGG - chr8_1:27912599-27912618 None:intergenic 35.0%
ATTTATGCTCAACGATGATG+AGG - chr8_1:27912600-27912619 None:intergenic 35.0%
ATGGTCAAATTACTGCAAGT+AGG - chr8_1:27913397-27913416 None:intergenic 35.0%
!!! TCCTTTTGAAGTCAAACCAA+CGG + chr8_1:27913434-27913453 Msa1187940:intron 35.0%
TGTTATCTTTCTAATGCCGT+TGG - chr8_1:27913453-27913472 None:intergenic 35.0%
!!! TTGGGATTTTGGGATGAAAA+TGG - chr8_1:27913591-27913610 None:intergenic 35.0%
! GGGATTCAAAATTGGGATTT+TGG - chr8_1:27913602-27913621 None:intergenic 35.0%
!! CAAACTTTGGGACCAAATTT+GGG - chr8_1:27913630-27913649 None:intergenic 35.0%
!! ACAAACTTTGGGACCAAATT+TGG - chr8_1:27913631-27913650 None:intergenic 35.0%
! GATTACCCATGGATTATCTA+AGG + chr8_1:27913794-27913813 Msa1187940:intron 35.0%
ACAGACCTTAGATAATCCAT+GGG - chr8_1:27913802-27913821 None:intergenic 35.0%
TACAGACCTTAGATAATCCA+TGG - chr8_1:27913803-27913822 None:intergenic 35.0%
!! TGCATCGATTGTTAAGGTAA+GGG - chr8_1:27913978-27913997 None:intergenic 35.0%
! TAGAACGTACGATCAGTTTT+TGG - chr8_1:27914071-27914090 None:intergenic 35.0%
GGTGTAAGAGAAATTAGATG+AGG - chr8_1:27914129-27914148 None:intergenic 35.0%
TGATCTTGAGTTAGAACAGA+TGG - chr8_1:27914814-27914833 None:intergenic 35.0%
! AACAATTGGCATCTTTTCAC+CGG - chr8_1:27914886-27914905 None:intergenic 35.0%
CACAACGAATTCACAACAAT+TGG - chr8_1:27914900-27914919 None:intergenic 35.0%
! GCATCAAGTTTTTATTGGTG+TGG - chr8_1:27914927-27914946 None:intergenic 35.0%
ACCAATAAAAACTTGATGCG+TGG + chr8_1:27914928-27914947 Msa1187940:intron 35.0%
! TCCACGCATCAAGTTTTTAT+TGG - chr8_1:27914932-27914951 None:intergenic 35.0%
TACGAAGCAATCAAATCAAG+CGG + chr8_1:27914961-27914980 Msa1187940:intron 35.0%
CCTTAGAACAAAACACTGTT+AGG - chr8_1:27915227-27915246 None:intergenic 35.0%
!! CCTAACAGTGTTTTGTTCTA+AGG + chr8_1:27915224-27915243 Msa1187940:intron 35.0%
GGTTTATAGAGAATTTCTCG+TGG - chr8_1:27915284-27915303 None:intergenic 35.0%
AGAAGCCAACAAACAAACTA+GGG - chr8_1:27910287-27910306 None:intergenic 35.0%
TAGAAGCCAACAAACAAACT+AGG - chr8_1:27910288-27910307 None:intergenic 35.0%
TAAGAAGTCATGTGCACAAT+CGG + chr8_1:27915662-27915681 Msa1187940:intron 35.0%
CAGAGCACAATTGTATTCAT+GGG - chr8_1:27915834-27915853 None:intergenic 35.0%
ACAGAGCACAATTGTATTCA+TGG - chr8_1:27915835-27915854 None:intergenic 35.0%
TTAAGTCGATATCTCCAACT+AGG - chr8_1:27915912-27915931 None:intergenic 35.0%
ACGTTTGACAACAAAATGAC+AGG - chr8_1:27915979-27915998 None:intergenic 35.0%
TACACAATAAGCACAAGTGA+TGG - chr8_1:27916007-27916026 None:intergenic 35.0%
!! GTTTTATTGTTCACATGCTG+CGG + chr8_1:27916068-27916087 Msa1187940:intron 35.0%
ACAGCCACTTAGATACATTA+GGG - chr8_1:27916176-27916195 None:intergenic 35.0%
TACAGCCACTTAGATACATT+AGG - chr8_1:27916177-27916196 None:intergenic 35.0%
AATCGACTAACTTACCATCT+AGG - chr8_1:27916230-27916249 None:intergenic 35.0%
GCCATAGTGAAAATAGAACA+GGG - chr8_1:27916396-27916415 None:intergenic 35.0%
GTATTCGTAGATCATAGCTA+AGG + chr8_1:27916416-27916435 Msa1187940:intron 35.0%
TTGCTATGTCCAGTTTATGT+CGG + chr8_1:27917130-27917149 Msa1187940:intron 35.0%
! TTCAATAGGACGGCTTTATA+CGG + chr8_1:27917166-27917185 Msa1187940:intron 35.0%
GATATTGAAGAAGGAGTAGA+AGG + chr8_1:27917345-27917364 Msa1187940:CDS 35.0%
!!! TTTTCAGGTTCTGGATTTGA+TGG + chr8_1:27917581-27917600 Msa1187940:intron 35.0%
! TACTCCAGAAACTCTTTTGA+AGG + chr8_1:27917712-27917731 Msa1187940:CDS 35.0%
!! CAGTTGATAGTATTGGAATG+TGG - chr8_1:27918047-27918066 None:intergenic 35.0%
!! ATCTGCTCAGTTGATAGTAT+TGG - chr8_1:27918054-27918073 None:intergenic 35.0%
GGGAAATAACAAACCCTAAT+GGG - chr8_1:27918270-27918289 None:intergenic 35.0%
AGGGAAATAACAAACCCTAA+TGG - chr8_1:27918271-27918290 None:intergenic 35.0%
AACCTGTCTCTTTATCCTTT+AGG + chr8_1:27918416-27918435 Msa1187940:intron 35.0%
AACCTAAAGGATAAAGAGAC+AGG - chr8_1:27918421-27918440 None:intergenic 35.0%
TTAGCAAACGCTAAACCTAA+AGG - chr8_1:27918434-27918453 None:intergenic 35.0%
! TTTTCTAACATGATCAGCCA+TGG + chr8_1:27918507-27918526 Msa1187940:intron 35.0%
TTTCTAACATGATCAGCCAT+GGG + chr8_1:27918508-27918527 Msa1187940:intron 35.0%
! TCTATCGTTGTTGTTGTTGT+TGG - chr8_1:27918649-27918668 None:intergenic 35.0%
AGAAACAATCTGAACAAAGG+AGG + chr8_1:27918666-27918685 Msa1187940:intron 35.0%
AGAACCAATTCCGGTTATTA+GGG + chr8_1:27918689-27918708 Msa1187940:intron 35.0%
TTCGGTACGTAACAATAGTA+GGG - chr8_1:27918728-27918747 None:intergenic 35.0%
TTTCGGTACGTAACAATAGT+AGG - chr8_1:27918729-27918748 None:intergenic 35.0%
ACATACCCATGAATCTGATT+TGG + chr8_1:27918755-27918774 Msa1187940:intron 35.0%
AATTCTTATGCCGTTGAAAG+AGG + chr8_1:27918986-27919005 Msa1187940:CDS 35.0%
CTCAATACTAACAACAGGTT+CGG - chr8_1:27919081-27919100 None:intergenic 35.0%
GTCTTCTCAATACTAACAAC+AGG - chr8_1:27919086-27919105 None:intergenic 35.0%
! GTTGTTAGTATTGAGAAGAC+TGG + chr8_1:27919086-27919105 Msa1187940:CDS 35.0%
! CACTTTGTGATGGAGAAAAT+AGG + chr8_1:27919123-27919142 Msa1187940:CDS 35.0%
ACTAGACATAATTGCGAAGA+GGG + chr8_1:27919284-27919303 Msa1187940:CDS 35.0%
AAATGCTGAACACAATGACG+AGG + chr8_1:27909169-27909188 Msa1187940:CDS 40.0%
GGTACAACATTCGAATTTGG+TGG + chr8_1:27909499-27909518 Msa1187940:intron 40.0%
! TCGTTTTACTGTCCTGAACT+TGG + chr8_1:27909853-27909872 Msa1187940:intron 40.0%
ACCAAGCAATCAAATCAAGG+GGG + chr8_1:27909945-27909964 Msa1187940:intron 40.0%
GTCTAATGATGACCTACTCT+GGG + chr8_1:27910051-27910070 Msa1187940:intron 40.0%
TCTAATGATGACCTACTCTG+GGG + chr8_1:27910052-27910071 Msa1187940:intron 40.0%
ATTGGGACTTGGGTAGAATT+AGG - chr8_1:27910161-27910180 None:intergenic 40.0%
ACTGTTAGGATTGAGTCTCT+TGG - chr8_1:27910196-27910215 None:intergenic 40.0%
TCTCTTGGCAACAAACACTA+GGG - chr8_1:27910251-27910270 None:intergenic 40.0%
TTCTCTTGGCAACAAACACT+AGG - chr8_1:27910252-27910271 None:intergenic 40.0%
GAACTGCTTTCAACCAATCA+TGG + chr8_1:27910479-27910498 Msa1187940:intron 40.0%
!! TCACTGATTTGAAGTCAAGG+TGG - chr8_1:27910571-27910590 None:intergenic 40.0%
!!! GATCTACTGATTTTCCACCT+TGG + chr8_1:27910612-27910631 Msa1187940:intron 40.0%
GATTGAGACAAAGGAGATCA+TGG - chr8_1:27910680-27910699 None:intergenic 40.0%
!! GAGAAATGGGGATTAGTCAA+GGG - chr8_1:27910812-27910831 None:intergenic 40.0%
AAGGAAGCCATATGGTTGAA+AGG - chr8_1:27910843-27910862 None:intergenic 40.0%
AGTACATTGCCCTTGTTGAA+GGG - chr8_1:27910869-27910888 None:intergenic 40.0%
! ATGGTGGTCTGAAGTATACA+AGG - chr8_1:27911058-27911077 None:intergenic 40.0%
ATGAATGGGTCTTTGAATGG+TGG - chr8_1:27911074-27911093 None:intergenic 40.0%
!! AGCTTTGAAGTGGGATGAAT+GGG - chr8_1:27911088-27911107 None:intergenic 40.0%
!! AAGCTTTGAAGTGGGATGAA+TGG - chr8_1:27911089-27911108 None:intergenic 40.0%
! AAGTCGGTTTATGGCAAATC+CGG - chr8_1:27911127-27911146 None:intergenic 40.0%
CTTCAAACCCAACTTGCATA+GGG + chr8_1:27911204-27911223 Msa1187940:intron 40.0%
GAAGAGAAAAGCAAGATGGA+GGG - chr8_1:27911234-27911253 None:intergenic 40.0%
TGAAGAGAAAAGCAAGATGG+AGG - chr8_1:27911235-27911254 None:intergenic 40.0%
CGATGAAGAGAAAAGCAAGA+TGG - chr8_1:27911238-27911257 None:intergenic 40.0%
AACTTTGTGTGATGACCAAG+AGG + chr8_1:27911282-27911301 Msa1187940:intron 40.0%
AGGTTACTTGAGGAAAGTGA+TGG - chr8_1:27911346-27911365 None:intergenic 40.0%
CTTGGTATGGATATCATGAG+GGG - chr8_1:27911402-27911421 None:intergenic 40.0%
GATGAGTTCCTAGTAAAGAC+TGG - chr8_1:27911612-27911631 None:intergenic 40.0%
AACTTCGCAGCGAAATAGTT+TGG + chr8_1:27911791-27911810 Msa1187940:intron 40.0%
!! GAGCAACATTTTCAAGCAGA+AGG + chr8_1:27912032-27912051 Msa1187940:intron 40.0%
!! GCAACATTTTCAAGCAGAAG+GGG + chr8_1:27912034-27912053 Msa1187940:intron 40.0%
AATGCATGTGGTACCATTCT+AGG + chr8_1:27912566-27912585 Msa1187940:intron 40.0%
ATGCATGTGGTACCATTCTA+GGG + chr8_1:27912567-27912586 Msa1187940:intron 40.0%
TGATATCTTTCCAGTAGCCT+TGG - chr8_1:27913068-27913087 None:intergenic 40.0%
GGCTTAGGGGATTCAAAATT+GGG - chr8_1:27913609-27913628 None:intergenic 40.0%
TAGGGTTTGAGTGAGAATTG+AGG - chr8_1:27913867-27913886 None:intergenic 40.0%
!! CTGCATCGATTGTTAAGGTA+AGG - chr8_1:27913979-27913998 None:intergenic 40.0%
AGACAAAGAGAAGAGAGAAG+AGG - chr8_1:27914002-27914021 None:intergenic 40.0%
! ATGGGTTAAAGCAAAGTCCA+AGG - chr8_1:27914680-27914699 None:intergenic 40.0%
CAACTCTCCATGTAGAAATG+CGG + chr8_1:27914779-27914798 Msa1187940:intron 40.0%
ACGAAGCAATCAAATCAAGC+GGG + chr8_1:27914962-27914981 Msa1187940:intron 40.0%
GGTCATCATTAGACTGAACT+AGG - chr8_1:27915062-27915081 None:intergenic 40.0%
AGTCTAATGATGACCTACTC+TGG + chr8_1:27915067-27915086 Msa1187940:intron 40.0%
GTCTAATGATGACCTACTCT+GGG + chr8_1:27910051-27910070 Msa1187940:intron 40.0%
TCTAATGATGACCTACTCTG+GGG + chr8_1:27910052-27910071 Msa1187940:intron 40.0%
ACTGTTAGGATTGAGTCTCT+TGG - chr8_1:27910196-27910215 None:intergenic 40.0%
AAGAAGTCATGTGCACAATC+GGG + chr8_1:27915663-27915682 Msa1187940:intron 40.0%
GTGAACAAGAGATACAAGTC+AGG - chr8_1:27916109-27916128 None:intergenic 40.0%
! ACGCTACTTGCTTTGTTGAA+TGG + chr8_1:27916127-27916146 Msa1187940:intron 40.0%
CAAGCCCTAATGTATCTAAG+TGG + chr8_1:27916169-27916188 Msa1187940:intron 40.0%
! GCCCTGTTCTATTTTCACTA+TGG + chr8_1:27916392-27916411 Msa1187940:intron 40.0%
CGCCATAGTGAAAATAGAAC+AGG - chr8_1:27916397-27916416 None:intergenic 40.0%
TACTTTGATCGAATGGCTTG+TGG - chr8_1:27916707-27916726 None:intergenic 40.0%
GTACTGGATGTGTCTTCAAT+AGG + chr8_1:27917152-27917171 Msa1187940:intron 40.0%
TGGATGTGTCTTCAATAGGA+CGG + chr8_1:27917156-27917175 Msa1187940:intron 40.0%
AGTCTGGAGGATATTGAAGA+AGG + chr8_1:27917336-27917355 Msa1187940:CDS 40.0%
TTGAAGAAGGAGTAGAAGGT+AGG + chr8_1:27917349-27917368 Msa1187940:intron 40.0%
AACTATTATGCAACGAACGC+AGG - chr8_1:27917375-27917394 None:intergenic 40.0%
! AGCTTGCTTTCTTGCTTCTT+TGG + chr8_1:27917474-27917493 Msa1187940:intron 40.0%
GAGGACCTTGAGAAAAGATT+CGG + chr8_1:27917629-27917648 Msa1187940:CDS 40.0%
! ATTGGCCGAATCTTTTCTCA+AGG - chr8_1:27917637-27917656 None:intergenic 40.0%
!! TCCAGAAACTCTTTTGAAGG+AGG + chr8_1:27917715-27917734 Msa1187940:CDS 40.0%
GGAGGCTATTATGTTATCAG+CGG + chr8_1:27917733-27917752 Msa1187940:intron 40.0%
TAAATCAGAATGGGGAACAG+AGG + chr8_1:27917768-27917787 Msa1187940:intron 40.0%
AACATGACATGGATCTCCTT+TGG - chr8_1:27917975-27917994 None:intergenic 40.0%
AAGGAGATCCATGTCATGTT+CGG + chr8_1:27917975-27917994 Msa1187940:intron 40.0%
! TCGAGATTTTCTCTCGATTC+TGG + chr8_1:27918353-27918372 Msa1187940:intron 40.0%
! AGATTTTCTCTCGATTCTGG+TGG + chr8_1:27918356-27918375 Msa1187940:intron 40.0%
! TTCGGAAACCCTTATTTGAC+AGG + chr8_1:27918381-27918400 Msa1187940:intron 40.0%
! ACCCTTATTTGACAGGTTTG+TGG + chr8_1:27918388-27918407 Msa1187940:intron 40.0%
GCCACAAACCTGTCAAATAA+GGG - chr8_1:27918392-27918411 None:intergenic 40.0%
AGCCACAAACCTGTCAAATA+AGG - chr8_1:27918393-27918412 None:intergenic 40.0%
GAGAACCAATTCCGGTTATT+AGG + chr8_1:27918688-27918707 Msa1187940:intron 40.0%
TGAACCCTAATAACCGGAAT+TGG - chr8_1:27918696-27918715 None:intergenic 40.0%
! GAAAGCATGTCTCAAAAGGT+CGG - chr8_1:27918892-27918911 None:intergenic 40.0%
CACATGGTTTCACTTTGTGA+TGG + chr8_1:27919113-27919132 Msa1187940:CDS 40.0%
AGTAACAGAAGATCTCATCG+TGG + chr8_1:27919232-27919251 Msa1187940:CDS 40.0%
GACTAGACATAATTGCGAAG+AGG + chr8_1:27919283-27919302 Msa1187940:CDS 40.0%
ATCATCCTTGTGCTCCTTCA+AGG - chr8_1:27909300-27909319 None:intergenic 45.0%
! ACCCCCTTGATTTGATTGCT+TGG - chr8_1:27909949-27909968 None:intergenic 45.0%
GGTCATCATTAGACCGAACT+GGG - chr8_1:27910045-27910064 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG - chr8_1:27910046-27910065 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG + chr8_1:27910050-27910069 Msa1187940:intron 45.0%
CTAATGATGACCTACTCTGG+GGG + chr8_1:27910053-27910072 Msa1187940:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG - chr8_1:27910190-27910209 None:intergenic 45.0%
TGGCAACAAACACTAGGGTT+GGG - chr8_1:27910246-27910265 None:intergenic 45.0%
TTGGCAACAAACACTAGGGT+TGG - chr8_1:27910247-27910266 None:intergenic 45.0%
! ATTTTTCCAGTGCTTGCCTC+AGG + chr8_1:27910457-27910476 Msa1187940:intron 45.0%
TTGGTTGAAAGCAGTTCCTG+AGG - chr8_1:27910476-27910495 None:intergenic 45.0%
TGAGACAAAGGAGATCATGG+TGG - chr8_1:27910677-27910696 None:intergenic 45.0%
!! GGAGAAATGGGGATTAGTCA+AGG - chr8_1:27910813-27910832 None:intergenic 45.0%
TTCCTTGACCCCTTCAACAA+GGG + chr8_1:27910857-27910876 Msa1187940:intron 45.0%
GTACATTGCCCTTGTTGAAG+GGG - chr8_1:27910868-27910887 None:intergenic 45.0%
GAGTACATTGCCCTTGTTGA+AGG - chr8_1:27910870-27910889 None:intergenic 45.0%
TGTTCGGTACAGCAGTAACT+TGG - chr8_1:27910938-27910957 None:intergenic 45.0%
TTTGGAGGGATTTGTGGATG+CGG - chr8_1:27911015-27911034 None:intergenic 45.0%
AAGTATACAAGGTCACCACC+AGG - chr8_1:27911047-27911066 None:intergenic 45.0%
GGGATGAATGGGTCTTTGAA+TGG - chr8_1:27911077-27911096 None:intergenic 45.0%
!! GCATTGGCAAGCTTTGAAGT+GGG - chr8_1:27911097-27911116 None:intergenic 45.0%
!! TGCATTGGCAAGCTTTGAAG+TGG - chr8_1:27911098-27911117 None:intergenic 45.0%
CAAATCCGGGTCAAATGCAT+TGG - chr8_1:27911113-27911132 None:intergenic 45.0%
! AGTCGGTTTATGGCAAATCC+GGG - chr8_1:27911126-27911145 None:intergenic 45.0%
GCTTCAAACCCAACTTGCAT+AGG + chr8_1:27911203-27911222 Msa1187940:intron 45.0%
TATCTCGGCAAGGTTACTTG+AGG - chr8_1:27911356-27911375 None:intergenic 45.0%
GAGTTGTTCTTATCTCGGCA+AGG - chr8_1:27911366-27911385 None:intergenic 45.0%
ATCATGAGGGGTCGAAACAA+AGG - chr8_1:27911390-27911409 None:intergenic 45.0%
ACCTAAGACACACACTTGTG+AGG + chr8_1:27911956-27911975 Msa1187940:intron 45.0%
TCCTCACAAGTGTGTGTCTT+AGG - chr8_1:27911960-27911979 None:intergenic 45.0%
! AGATTAGTTACGGTCGTGAG+TGG - chr8_1:27911985-27912004 None:intergenic 45.0%
CTCACGACCGTAACTAATCT+AGG + chr8_1:27911985-27912004 Msa1187940:intron 45.0%
! CTTTTGCTCAACGACGATGA+GGG - chr8_1:27912641-27912660 None:intergenic 45.0%
TCGTTGAGCAAAAGCTCCTA+CGG + chr8_1:27912647-27912666 Msa1187940:intron 45.0%
! CTTTTTCTCAACGACGACGA+GGG - chr8_1:27912679-27912698 None:intergenic 45.0%
GTCGTTGAGAAAAAGCTCCA+GGG + chr8_1:27912684-27912703 Msa1187940:intron 45.0%
TCATGTCAAACCAAGGCTAC+TGG + chr8_1:27913055-27913074 Msa1187940:intron 45.0%
TCACGTCAAACTAAAGCCAC+TGG + chr8_1:27913247-27913266 Msa1187940:intron 45.0%
!! GCCGTTGGTTTGACTTCAAA+AGG - chr8_1:27913438-27913457 None:intergenic 45.0%
! ATGCTGTCTGAGATAGCTCT+CGG + chr8_1:27913558-27913577 Msa1187940:intron 45.0%
GGGCTTAGGGGATTCAAAAT+TGG - chr8_1:27913610-27913629 None:intergenic 45.0%
GAATCCCCTAAGCCCAAATT+TGG + chr8_1:27913615-27913634 Msa1187940:intron 45.0%
TGGGACCAAATTTGGGCTTA+GGG - chr8_1:27913623-27913642 None:intergenic 45.0%
TTGGGACCAAATTTGGGCTT+AGG - chr8_1:27913624-27913643 None:intergenic 45.0%
!! AGAGGCTGCATCGATTGTTA+AGG - chr8_1:27913984-27914003 None:intergenic 45.0%
ACGTTACAATACCACTGCCT+TGG + chr8_1:27914660-27914679 Msa1187940:intron 45.0%
TAAAGCAAAGTCCAAGGCAG+TGG - chr8_1:27914674-27914693 None:intergenic 45.0%
CGCATTTCTACATGGAGAGT+TGG - chr8_1:27914781-27914800 None:intergenic 45.0%
GTGAAGACCGCATTTCTACA+TGG - chr8_1:27914789-27914808 None:intergenic 45.0%
! AATTGGCATCTTTTCACCGG+TGG - chr8_1:27914883-27914902 None:intergenic 45.0%
CTAATGATGACCTACTCTGG+GGG + chr8_1:27910053-27910072 Msa1187940:intron 45.0%
ATTGGGACTTGGGTCGAATT+AGG - chr8_1:27915178-27915197 None:intergenic 45.0%
AGGATTGAGTCTCTTGGTCA+CGG - chr8_1:27910190-27910209 None:intergenic 45.0%
TGGCAACAAACACTAGGGTT+GGG - chr8_1:27910246-27910265 None:intergenic 45.0%
TCTCGTGGCAACAAACACTA+GGG - chr8_1:27915269-27915288 None:intergenic 45.0%
TTCTCGTGGCAACAAACACT+AGG - chr8_1:27915270-27915289 None:intergenic 45.0%
TTGGTTGAAAGCAGTTCCTG+AGG - chr8_1:27910476-27910495 None:intergenic 45.0%
GAACTGCTTTCAACCAATCG+TGG + chr8_1:27915503-27915522 Msa1187940:intron 45.0%
! CAGATAACATGGTAGCGAAC+TGG + chr8_1:27915626-27915645 Msa1187940:intron 45.0%
!! TCTGTGTGAAGGTACCTAGT+TGG + chr8_1:27915895-27915914 Msa1187940:intron 45.0%
TGTCCAGTTTATGTCGGTAC+TGG + chr8_1:27917136-27917155 Msa1187940:intron 45.0%
!! CATCCAGTACCGACATAAAC+TGG - chr8_1:27917142-27917161 None:intergenic 45.0%
TTTCTGTCATCACTCTGTGG+TGG + chr8_1:27917225-27917244 Msa1187940:CDS 45.0%
AGACTGAAGATCGACACAGT+TGG - chr8_1:27917321-27917340 None:intergenic 45.0%
! AACTGTGTCGATCTTCAGTC+TGG + chr8_1:27917320-27917339 Msa1187940:CDS 45.0%
GAATCTACGCTGATGGAGAA+TGG + chr8_1:27917671-27917690 Msa1187940:CDS 45.0%
GCCTCCTTCAAAAGAGTTTC+TGG - chr8_1:27917719-27917738 None:intergenic 45.0%
GGCTATTATGTTATCAGCGG+TGG + chr8_1:27917736-27917755 Msa1187940:intron 45.0%
TGTTATCAGCGGTGGTTATG+AGG + chr8_1:27917744-27917763 Msa1187940:intron 45.0%
ATCGAAAGCTAAGCGTGTCT+AGG + chr8_1:27917836-27917855 Msa1187940:intron 45.0%
TCGAAAGCTAAGCGTGTCTA+GGG + chr8_1:27917837-27917856 Msa1187940:intron 45.0%
CAATGACACCGAACATGACA+TGG - chr8_1:27917986-27918005 None:intergenic 45.0%
!! CTCTCGATTCTGGTGGATTT+CGG + chr8_1:27918363-27918382 Msa1187940:intron 45.0%
TGATACCAACTGACGCAGTA+CGG - chr8_1:27918466-27918485 None:intergenic 45.0%
!! CGTCATAAGTTGATCTCCCA+TGG - chr8_1:27918527-27918546 None:intergenic 45.0%
TGGGAGATCAACTTATGACG+AGG + chr8_1:27918527-27918546 Msa1187940:intron 45.0%
GGGAGATCAACTTATGACGA+GGG + chr8_1:27918528-27918547 Msa1187940:intron 45.0%
!! CAAAGCGCTGTCAGATCATA+TGG + chr8_1:27918590-27918609 Msa1187940:intron 45.0%
TATGGCAGCGTGGACAATTA+AGG + chr8_1:27918608-27918627 Msa1187940:intron 45.0%
CAAAGGAGGAGAACCAATTC+CGG + chr8_1:27918680-27918699 Msa1187940:intron 45.0%
ATGTCTCAAAAGGTCGGTCA+AGG - chr8_1:27918886-27918905 None:intergenic 45.0%
! GTTTTCGACGTCTGTGGAAT+CGG + chr8_1:27919037-27919056 Msa1187940:CDS 45.0%
AACAGAAGATCTCATCGTGG+AGG + chr8_1:27919235-27919254 Msa1187940:CDS 45.0%
AATTGATACCATCCCTGCTG+AGG + chr8_1:27919355-27919374 Msa1187940:CDS 45.0%
!!! TTTTTAAATATATTTATTTG+TGG + chr8_1:27916580-27916599 Msa1187940:intron 5.0%
ACGGGAAGAGATTGGGACTT+GGG - chr8_1:27910171-27910190 None:intergenic 50.0%
CTTGGTCACGGGAAGAGATT+GGG - chr8_1:27910178-27910197 None:intergenic 50.0%
TCTTGGTCACGGGAAGAGAT+TGG - chr8_1:27910179-27910198 None:intergenic 50.0%
GGATTGAGTCTCTTGGTCAC+GGG - chr8_1:27910189-27910208 None:intergenic 50.0%
CTGGAAAAATCGTGCCACGA+TGG - chr8_1:27910447-27910466 None:intergenic 50.0%
CAGAAGCAACGTGCCATGAT+TGG - chr8_1:27910495-27910514 None:intergenic 50.0%
AGCAGACATGTTCACCAAGG+TGG - chr8_1:27910629-27910648 None:intergenic 50.0%
ACCTTGGTGAACATGTCTGC+TGG + chr8_1:27910628-27910647 Msa1187940:intron 50.0%
TCCAGCAGACATGTTCACCA+AGG - chr8_1:27910632-27910651 None:intergenic 50.0%
! GGAGATCATGGTGGAGAAAG+TGG - chr8_1:27910668-27910687 None:intergenic 50.0%
AAGGGGTCAAGGAAGCCATA+TGG - chr8_1:27910851-27910870 None:intergenic 50.0%
CTTCCTTGACCCCTTCAACA+AGG + chr8_1:27910856-27910875 Msa1187940:intron 50.0%
CGGTACAGCAGTAACTTGGA+AGG - chr8_1:27910934-27910953 None:intergenic 50.0%
! TTTGTGGATGCGGACTATGC+AGG - chr8_1:27911005-27911024 None:intergenic 50.0%
!! GGATGCTTTGGAGGGATTTG+TGG - chr8_1:27911021-27911040 None:intergenic 50.0%
TACAAGGTCACCACCAGGAA+GGG - chr8_1:27911042-27911061 None:intergenic 50.0%
ATACAAGGTCACCACCAGGA+AGG - chr8_1:27911043-27911062 None:intergenic 50.0%
GCTTGCCAATGCATTTGACC+CGG + chr8_1:27911105-27911124 Msa1187940:intron 50.0%
GGGTACTCCCTATGCAAGTT+GGG - chr8_1:27911214-27911233 None:intergenic 50.0%
! AGGGTACTCCCTATGCAAGT+TGG - chr8_1:27911215-27911234 None:intergenic 50.0%
! CGGGGTGTTACAGGTATTGT+CGG - chr8_1:27911638-27911657 None:intergenic 50.0%
! TTGGGAAAACGGGGTGTTAC+AGG - chr8_1:27911647-27911666 None:intergenic 50.0%
TGAGGGCTTATGCCCTAGAA+TGG - chr8_1:27912582-27912601 None:intergenic 50.0%
! GCTTTTGCTCAACGACGATG+AGG - chr8_1:27912642-27912661 None:intergenic 50.0%
!! GCTTTTTCTCAACGACGACG+AGG - chr8_1:27912680-27912699 None:intergenic 50.0%
CGTCGTTGAGAAAAAGCTCC+AGG + chr8_1:27912683-27912702 Msa1187940:intron 50.0%
GGGACCAAATTTGGGCTTAG+GGG - chr8_1:27913622-27913641 None:intergenic 50.0%
ACGGGAAGAGATTGGGACTT+GGG - chr8_1:27910171-27910190 None:intergenic 50.0%
CTTGGTCACGGGAAGAGATT+GGG - chr8_1:27910178-27910197 None:intergenic 50.0%
TCTTGGTCACGGGAAGAGAT+TGG - chr8_1:27910179-27910198 None:intergenic 50.0%
GGATTGAGTCTCTTGGTCAC+GGG - chr8_1:27910189-27910208 None:intergenic 50.0%
GTGGCAACAAACACTAGGGT+TGG - chr8_1:27915265-27915284 None:intergenic 50.0%
CTGGAAAAGTTGTGCCACGA+TGG - chr8_1:27915471-27915490 None:intergenic 50.0%
! ACTTTTCCAGTGCTTGCCTC+AGG + chr8_1:27915481-27915500 Msa1187940:intron 50.0%
TGGAAGAAACGTGCCACGAT+TGG - chr8_1:27915519-27915538 None:intergenic 50.0%
TGGCACGTTTCTTCCAATCG+TGG + chr8_1:27915523-27915542 Msa1187940:intron 50.0%
GGCACGTTGCTTATGAATCG+TGG + chr8_1:27915565-27915584 Msa1187940:intron 50.0%
TGCTAGACCTCAACCAATGC+AGG + chr8_1:27915947-27915966 Msa1187940:CDS 50.0%
GCTAGACCTCAACCAATGCA+GGG + chr8_1:27915948-27915967 Msa1187940:CDS 50.0%
!! GTACAACCCTGCATTGGTTG+AGG - chr8_1:27915957-27915976 None:intergenic 50.0%
TGACAGGTACAACCCTGCAT+TGG - chr8_1:27915963-27915982 None:intergenic 50.0%
! CTCGTAGTGTTGAGCCTAGA+TGG + chr8_1:27916213-27916232 Msa1187940:intron 50.0%
CAGAGTGATGACAGAAACCC+AGG - chr8_1:27917222-27917241 None:intergenic 50.0%
GGGTTTCTGTCATCACTCTG+TGG + chr8_1:27917222-27917241 Msa1187940:CDS 50.0%
! TGTGTCGATCTTCAGTCTGG+AGG + chr8_1:27917323-27917342 Msa1187940:CDS 50.0%
TCTACGCTGATGGAGAATGG+TGG + chr8_1:27917674-27917693 Msa1187940:CDS 50.0%
!! GTTTCTGGAGTAGCACTCTG+AGG - chr8_1:27917704-27917723 None:intergenic 50.0%
ATCAGAATGGGGAACAGAGG+TGG + chr8_1:27917771-27917790 Msa1187940:intron 50.0%
TCAGAATGGGGAACAGAGGT+GGG + chr8_1:27917772-27917791 Msa1187940:intron 50.0%
TGATGTCGTGGTAAGAGTCG+CGG - chr8_1:27918572-27918591 None:intergenic 50.0%
TGTCAGATCATATGGCAGCG+TGG + chr8_1:27918598-27918617 Msa1187940:intron 50.0%
GGCAGATAACTCGCGTAAGA+CGG + chr8_1:27918917-27918936 Msa1187940:CDS 50.0%
! GCGTCGATCTCCTCTTTCAA+CGG - chr8_1:27918999-27919018 None:intergenic 50.0%
CACAGACGTCGAAAACGCTT+GGG - chr8_1:27919033-27919052 None:intergenic 50.0%
TGAGAAGACTGGTGAGCACA+TGG + chr8_1:27919097-27919116 Msa1187940:CDS 50.0%
! TGGCACCTTGAAGGAGCACA+AGG + chr8_1:27909292-27909311 Msa1187940:CDS 55.0%
CACGGGAAGAGATTGGGACT+TGG - chr8_1:27910172-27910191 None:intergenic 55.0%
GGAATCGTAACGTGGCACGA+TGG - chr8_1:27910426-27910445 None:intergenic 55.0%
GCCACGTTACGATTCCATCG+TGG + chr8_1:27910430-27910449 Msa1187940:intron 55.0%
GCCACGATGGAATCGTAACG+TGG - chr8_1:27910434-27910453 None:intergenic 55.0%
GGCACGTTGCTTCTGAATCG+TGG + chr8_1:27910500-27910519 Msa1187940:intron 55.0%
TGCCCTTGTTGAAGGGGTCA+AGG - chr8_1:27910862-27910881 None:intergenic 55.0%
! CCAGGAAGGGATGCTTTGGA+GGG - chr8_1:27911029-27911048 None:intergenic 55.0%
ACCAGGAAGGGATGCTTTGG+AGG - chr8_1:27911030-27911049 None:intergenic 55.0%
! TCCAAAGCATCCCTTCCTGG+TGG + chr8_1:27911029-27911048 Msa1187940:intron 55.0%
ACCACCAGGAAGGGATGCTT+TGG - chr8_1:27911033-27911052 None:intergenic 55.0%
AAGGTCGTTGGCACTCCTCT+TGG - chr8_1:27911300-27911319 None:intergenic 55.0%
ACGATGAGGGCTTATGCCCT+AGG - chr8_1:27912628-27912647 None:intergenic 55.0%
AAAGATGAGGGCTCATGCCC+TGG - chr8_1:27912704-27912723 None:intergenic 55.0%
CACGGGAAGAGATTGGGACT+TGG - chr8_1:27910172-27910191 None:intergenic 55.0%
GGAATCGTAACGTGGCACGA+TGG - chr8_1:27910426-27910445 None:intergenic 55.0%
GCCACGTTACGATTCCATCG+TGG + chr8_1:27910430-27910449 Msa1187940:intron 55.0%
GCCACGATGGAATCGTAACG+TGG - chr8_1:27910434-27910453 None:intergenic 55.0%
CAGAAGCAACGTGCCACGAT+TGG - chr8_1:27915539-27915558 None:intergenic 55.0%
GGCACGTTGCTTCTGAATCG+TGG + chr8_1:27910500-27910519 Msa1187940:intron 55.0%
AGCACAGCGTATGTCACGAG+AGG + chr8_1:27917610-27917629 Msa1187940:CDS 55.0%
GTGTCTAGGGACCGACAATG+CGG + chr8_1:27917850-27917869 Msa1187940:intron 55.0%
CTGACGCAGTACGGAAGCAA+GGG - chr8_1:27918457-27918476 None:intergenic 55.0%
ACTGACGCAGTACGGAAGCA+AGG - chr8_1:27918458-27918477 None:intergenic 55.0%
TGCTTCCGTACTGCGTCAGT+TGG + chr8_1:27918458-27918477 Msa1187940:intron 55.0%
! GCGTCAGTTGGTATCAGAGC+AGG + chr8_1:27918470-27918489 Msa1187940:intron 55.0%
ATGACGAGGGCAGAGTTTGC+CGG + chr8_1:27918541-27918560 Msa1187940:intron 55.0%
GGTAAGAGTCGCGGTTATGC+CGG - chr8_1:27918563-27918582 None:intergenic 55.0%
CTGACAGCGCTTTGATGTCG+TGG - chr8_1:27918584-27918603 None:intergenic 55.0%
AAGAGGAGATCGACGCTGCT+TGG + chr8_1:27919003-27919022 Msa1187940:CDS 55.0%
CCACAGACGTCGAAAACGCT+TGG - chr8_1:27919034-27919053 None:intergenic 55.0%
! CCAAGCGTTTTCGACGTCTG+TGG + chr8_1:27919031-27919050 Msa1187940:CDS 55.0%
ACAAGCTTCCTCAGCAGGGA+TGG - chr8_1:27919366-27919385 None:intergenic 55.0%
GGTCACAAGCTTCCTCAGCA+GGG - chr8_1:27919370-27919389 None:intergenic 55.0%
AGGTCACAAGCTTCCTCAGC+AGG - chr8_1:27919371-27919390 None:intergenic 55.0%
GAGGAAGCTTGTGACCTCAC+CGG + chr8_1:27919374-27919393 Msa1187940:CDS 55.0%
GTGGCACGATGGTACGCTGA+AGG - chr8_1:27910415-27910434 None:intergenic 60.0%
GCAGTTCCTGAGGCAAGCAC+TGG - chr8_1:27910466-27910485 None:intergenic 60.0%
! CCCTCCAAAGCATCCCTTCC+TGG + chr8_1:27911026-27911045 Msa1187940:intron 60.0%
GTGGCACGATGGTACGCTGA+AGG - chr8_1:27910415-27910434 None:intergenic 60.0%
GCAGTTCCTGAGGCAAGCAC+TGG - chr8_1:27910466-27910485 None:intergenic 60.0%
GCTGCTCTCTCCCCCAGAGT+AGG - chr8_1:27910066-27910085 None:intergenic 65.0%
ACGACGAGGGCTCATGCCGT+AGG - chr8_1:27912666-27912685 None:intergenic 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG - chr8_1:27910066-27910085 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 27909146 27919406 27909146 ID=Msa1187940;Name=Msa1187940
chr8_1 mRNA 27909146 27919406 27909146 ID=Msa1187940-mRNA-1;Parent=Msa1187940;Name=Msa1187940-mRNA-1;_AED=0.64;_eAED=0.64;_QI=0|0|0|0.6|0.5|0.4|5|0|410
chr8_1 exon 27909146 27909328 27909146 ID=Msa1187940-mRNA-1:exon:9842;Parent=Msa1187940-mRNA-1
chr8_1 exon 27915906 27916012 27915906 ID=Msa1187940-mRNA-1:exon:9843;Parent=Msa1187940-mRNA-1
chr8_1 exon 27917194 27917366 27917194 ID=Msa1187940-mRNA-1:exon:9844;Parent=Msa1187940-mRNA-1
chr8_1 exon 27917588 27917744 27917588 ID=Msa1187940-mRNA-1:exon:9845;Parent=Msa1187940-mRNA-1
chr8_1 exon 27918794 27919406 27918794 ID=Msa1187940-mRNA-1:exon:9846;Parent=Msa1187940-mRNA-1
chr8_1 CDS 27909146 27909328 27909146 ID=Msa1187940-mRNA-1:cds;Parent=Msa1187940-mRNA-1
chr8_1 CDS 27915906 27916012 27915906 ID=Msa1187940-mRNA-1:cds;Parent=Msa1187940-mRNA-1
chr8_1 CDS 27917194 27917366 27917194 ID=Msa1187940-mRNA-1:cds;Parent=Msa1187940-mRNA-1
chr8_1 CDS 27917588 27917744 27917588 ID=Msa1187940-mRNA-1:cds;Parent=Msa1187940-mRNA-1
chr8_1 CDS 27918794 27919406 27918794 ID=Msa1187940-mRNA-1:cds;Parent=Msa1187940-mRNA-1
Gene Sequence

>Msa1187940

ATGTTGACTTTGATTAATTTTGGAAATGCTGAACACAATGACGAGGTTGCCCAATATGATAGATTTAATGCTTTTATAATTGGTGAGTGCTCTAATGTGTTATGCCCAACTCAGTTTCATATCGATAGAGGAAAGAAACAAAATATTGGCACCTTGAAGGAGCACAAGGATGATGAATATCTTGTACCTAGTTGGAGATATCGACTTAATACTCGAAATCATGCTGCTAGACCTCAACCAATGCAGGGTTGTACCTGTCATTTTGTTGTCAAACGTCTCATCCATCACTTAACTCTTAAACTGAAACATAAAAAGCCTGGGTTTCTGTCATCACTCTGTGGTGGAAGTAGAAAGAAGAGTTCAAAATATAGTAAGAAAGGATCAGACATGAAAAAGTATAACAAGCACGTCGATCCAACTGTGTCGATCTTCAGTCTGGAGGATATTGAAGAAGGAGTAGAAGGTTCTGGATTTGATGGTGACAGAGCACAGCGTATGTCACGAGAGGACCTTGAGAAAAGATTCGGCCAATCAGCTGCTTTTATTGAATCTACGCTGATGGAGAATGGTGGTGTTCCTCAGAGTGCTACTCCAGAAACTCTTTTGAAGGAGGCTATTATATATTACACAAAGTTGAAGGATGATTACTACAAATTTAAAATCTTTGATTCGATATATCGTTGTCCGTTTTGTTACAACAAAGATTACTCCTTGACCGACCTTTTGAGACATGCTTTCAAAATGGCAGATAACTCGCGTAAGACGGTTAAAGATATTTTTAAACACTCTGTTTTGATAACGTATATTATAAGAATTCTTATGCCGTTGAAAGAGGAGATCGACGCTGCTTGGACGACCCAAGCGTTTTCGACGTCTGTGGAATCGGTTGAAGAACATTCTGTCACCGAACCTGTTGTTAGTATTGAGAAGACTGGTGAGCACATGGTTTCACTTTGTGATGGAGAAAATAGGGATTATAAAAAATTAAAGCAAGAAGAAGGGATGAGTATCGATGTTTCTTGTAAAGATGATTGTGCTGAGATTAAAATAATCACTACAGTAACAGAAGATCTCATCGTGGAGGATGTAGTAGACACCTATCCAAATAAGACTAGACATAATTGCGAAGAGGGCCAAGATTCTTTAGTTGATGATGTTTTGACGCTAAATAATGAACGTGAAATTGATACCATCCCTGCTGAGGAAGCTTGTGACCTCACCGGTGTCAGTTAA

Protein sequence

>Msa1187940

MLTLINFGNAEHNDEVAQYDRFNAFIIGECSNVLCPTQFHIDRGKKQNIGTLKEHKDDEYLVPSWRYRLNTRNHAARPQPMQGCTCHFVVKRLIHHLTLKLKHKKPGFLSSLCGGSRKKSSKYSKKGSDMKKYNKHVDPTVSIFSLEDIEEGVEGSGFDGDRAQRMSREDLEKRFGQSAAFIESTLMENGGVPQSATPETLLKEAIIYYTKLKDDYYKFKIFDSIYRCPFCYNKDYSLTDLLRHAFKMADNSRKTVKDIFKHSVLITYIIRILMPLKEEIDAAWTTQAFSTSVESVEEHSVTEPVVSIEKTGEHMVSLCDGENRDYKKLKQEEGMSIDVSCKDDCAEIKIITTVTEDLIVEDVVDTYPNKTRHNCEEGQDSLVDDVLTLNNEREIDTIPAEEACDLTGVS*