AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1023200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1023200 MtrunA17_Chr7g0240821 100.000 77 0 0 1 77 1 77 5.80e-53 164
Msa1023200 MtrunA17_Chr5g0434931 79.452 73 15 0 5 77 39 111 1.98e-37 125
Msa1023200 MtrunA17_Chr7g0228991 78.082 73 16 0 5 77 33 105 1.33e-35 121
Msa1023200 MtrunA17_Chr5g0434911 75.342 73 18 0 5 77 25 97 1.47e-35 120
Msa1023200 MtrunA17_Chr5g0434831 72.603 73 20 0 5 77 11 83 4.90e-35 117
Msa1023200 MtrunA17_Chr5g0434841 72.603 73 20 0 5 77 24 96 5.62e-35 120
Msa1023200 MtrunA17_Chr8g0360111 68.750 80 22 1 1 77 22 101 3.77e-33 114
Msa1023200 MtrunA17_Chr7g0220341 70.667 75 20 1 5 77 29 103 8.80e-33 114
Msa1023200 MtrunA17_Chr4g0055981 67.123 73 24 0 5 77 59 131 1.47e-30 107
Msa1023200 MtrunA17_Chr4g0070611 63.014 73 27 0 5 77 16 88 2.71e-29 105
Msa1023200 MtrunA17_Chr3g0115821 62.500 72 27 0 6 77 17 88 2.82e-29 106
Msa1023200 MtrunA17_Chr1g0187761 63.889 72 26 0 6 77 17 88 4.54e-29 103
Msa1023200 MtrunA17_Chr4g0022931 62.500 72 27 0 6 77 18 89 4.65e-29 103
Msa1023200 MtrunA17_Chr4g0022901 62.500 72 27 0 6 77 18 89 6.47e-29 103
Msa1023200 MtrunA17_Chr8g0342541 62.500 72 27 0 6 77 17 88 6.77e-29 105
Msa1023200 MtrunA17_Chr4g0070641 63.014 73 27 0 5 77 16 88 8.97e-29 100
Msa1023200 MtrunA17_Chr8g0342531 62.500 72 27 0 6 77 17 88 1.87e-28 99.8
Msa1023200 MtrunA17_Chr8g0342521 61.111 72 28 0 6 77 17 88 3.43e-28 103
Msa1023200 MtrunA17_Chr4g0022911 58.333 72 30 0 6 77 18 89 3.99e-28 102
Msa1023200 MtrunA17_Chr4g0037141 64.384 73 26 0 5 77 16 88 7.78e-28 101
Msa1023200 MtrunA17_Chr4g0039971 59.722 72 29 0 6 77 18 89 8.37e-28 102
Msa1023200 MtrunA17_Chr8g0346561 61.644 73 28 0 5 77 16 88 1.05e-27 101
Msa1023200 MtrunA17_Chr5g0435101 63.014 73 27 0 5 77 15 87 1.21e-27 99.0
Msa1023200 MtrunA17_Chr8g0385321 58.904 73 30 0 5 77 16 88 1.69e-27 100
Msa1023200 MtrunA17_Chr5g0395281 58.333 72 30 0 6 77 17 88 1.85e-27 100
Msa1023200 MtrunA17_Chr4g0042611 58.904 73 30 0 5 77 16 88 1.92e-27 95.1
Msa1023200 MtrunA17_Chr5g0395221 57.534 73 31 0 5 77 16 88 2.34e-27 94.7
Msa1023200 MtrunA17_Chr7g0275911 60.274 73 29 0 5 77 16 88 2.43e-27 99.4
Msa1023200 MtrunA17_Chr2g0330041 58.333 72 30 0 6 77 17 88 2.61e-27 101
Msa1023200 MtrunA17_Chr3g0121241 58.333 72 30 0 6 77 47 118 3.00e-27 100
Msa1023200 MtrunA17_Chr7g0217221 62.500 72 27 0 6 77 17 88 3.56e-27 99.4
Msa1023200 MtrunA17_Chr4g0022891 57.534 73 31 0 5 77 16 88 4.52e-27 98.2
Msa1023200 MtrunA17_Chr8g0342511 59.155 71 29 0 6 76 17 87 9.35e-27 93.6
Msa1023200 MtrunA17_Chr7g0271241 59.722 72 29 0 6 77 17 88 1.24e-26 99.8
Msa1023200 MtrunA17_Chr7g0274581 59.722 72 29 0 6 77 17 88 1.39e-26 96.3
Msa1023200 MtrunA17_Chr8g0342481 60.274 73 28 1 6 77 17 89 1.64e-26 99.4
Msa1023200 MtrunA17_Chr4g0060721 63.889 72 26 0 6 77 18 89 1.93e-26 98.6
Msa1023200 MtrunA17_Chr6g0453211 61.111 72 28 0 6 77 17 88 2.05e-26 98.2
Msa1023200 MtrunA17_Chr8g0342461 60.274 73 28 1 6 77 17 89 2.19e-26 94.0
Msa1023200 MtrunA17_Chr4g0048511 59.722 72 29 0 6 77 18 89 2.41e-26 98.6
Msa1023200 MtrunA17_Chr1g0167691 58.333 72 30 0 6 77 17 88 2.50e-26 96.7
Msa1023200 MtrunA17_Chr1g0193801 59.722 72 29 0 6 77 17 88 3.07e-26 98.6
Msa1023200 MtrunA17_Chr2g0323351 61.111 72 28 0 6 77 17 88 3.41e-26 96.3
Msa1023200 MtrunA17_Chr2g0323321 57.534 73 31 0 5 77 15 87 3.88e-26 92.4
Msa1023200 MtrunA17_Chr1g0193371 56.944 72 31 0 6 77 17 88 4.88e-26 97.8
Msa1023200 MtrunA17_Chr3g0092401 61.111 72 28 0 6 77 18 89 6.12e-26 96.7
Msa1023200 MtrunA17_Chr3g0131121 60.274 73 29 0 5 77 16 88 6.57e-26 96.3
Msa1023200 MtrunA17_Chr1g0167661 58.333 72 30 0 6 77 17 88 6.68e-26 95.5
Msa1023200 MtrunA17_Chr8g0343831 58.904 73 30 0 5 77 12 84 6.76e-26 95.5
Msa1023200 MtrunA17_Chr7g0270891 58.333 72 30 0 6 77 17 88 6.92e-26 97.4
Msa1023200 MtrunA17_Chr2g0281071 59.722 72 29 0 6 77 18 89 7.63e-26 97.1
Msa1023200 MtrunA17_Chr8g0342471 58.904 73 29 1 6 77 17 89 8.10e-26 92.4
Msa1023200 MtrunA17_Chr4g0058631 55.556 72 32 0 6 77 17 88 1.45e-25 96.7
Msa1023200 MtrunA17_Chr4g0042671 58.333 72 30 0 6 77 17 88 1.97e-25 96.7
Msa1023200 MtrunA17_Chr2g0294811 59.722 72 29 0 6 77 17 88 2.03e-25 90.9
Msa1023200 MtrunA17_Chr4g0068061 61.111 72 28 0 6 77 17 88 2.23e-25 95.9
Msa1023200 MtrunA17_Chr3g0117091 56.944 72 31 0 6 77 17 88 2.48e-25 95.9
Msa1023200 MtrunA17_Chr2g0323411 58.333 72 30 0 6 77 17 88 2.60e-25 95.5
Msa1023200 MtrunA17_Chr7g0261281 58.333 72 30 0 6 77 17 88 3.41e-25 94.4
Msa1023200 MtrunA17_Chr6g0487491 58.904 73 29 1 6 77 17 89 4.56e-25 93.6
Msa1023200 MtrunA17_Chr6g0453471 58.333 72 30 0 6 77 17 88 5.85e-25 94.7
Msa1023200 MtrunA17_Chr1g0203411 58.904 73 30 0 5 77 16 88 8.78e-25 93.6
Msa1023200 MtrunA17_Chr7g0254411 59.722 72 29 0 6 77 17 88 9.83e-25 94.0
Msa1023200 MtrunA17_Chr4g0044421 58.904 73 30 0 5 77 16 88 1.17e-24 90.9
Msa1023200 MtrunA17_Chr1g0211161 56.944 72 31 0 6 77 18 89 1.17e-24 91.7
Msa1023200 MtrunA17_Chr7g0217741 56.944 72 31 0 6 77 17 88 1.38e-24 93.2
Msa1023200 MtrunA17_Chr5g0410961 56.944 72 31 0 6 77 17 88 1.49e-24 93.6
Msa1023200 MtrunA17_Chr8g0349261 57.534 73 30 1 6 77 18 90 2.38e-24 92.4
Msa1023200 MtrunA17_Chr2g0311221 56.944 72 31 0 6 77 19 90 3.07e-24 92.4
Msa1023200 MtrunA17_Chr4g0022881 54.795 73 33 0 5 77 16 88 4.19e-24 90.5
Msa1023200 MtrunA17_Chr5g0397231 55.556 72 32 0 6 77 17 88 4.57e-24 92.0
Msa1023200 MtrunA17_Chr3g0103281 55.556 72 32 0 6 77 17 88 8.44e-24 91.3
Msa1023200 MtrunA17_Chr2g0309911 54.167 72 33 0 6 77 16 87 1.06e-23 90.9
Msa1023200 MtrunA17_Chr1g0194951 59.722 72 29 0 6 77 17 88 1.07e-23 91.7
Msa1023200 MtrunA17_Chr1g0203441 55.556 72 32 0 6 77 18 89 1.40e-23 89.7
Msa1023200 MtrunA17_Chr4g0032401 55.556 72 32 0 6 77 22 93 3.12e-23 89.7
Msa1023200 MtrunA17_Chr3g0099131 52.778 72 34 0 6 77 46 117 4.41e-23 90.9
Msa1023200 MtrunA17_Chr8g0387421 54.167 72 33 0 6 77 17 88 4.56e-23 89.4
Msa1023200 MtrunA17_Chr5g0417821 54.167 72 33 0 6 77 12 83 8.18e-23 88.2
Msa1023200 MtrunA17_Chr2g0328771 54.167 72 33 0 6 77 25 96 9.82e-23 88.2
Msa1023200 MtrunA17_Chr3g0099141 52.778 72 34 0 6 77 45 116 2.56e-22 83.6
Msa1023200 MtrunA17_Chr3g0080861 50.000 72 36 0 6 77 42 113 2.70e-22 88.6
Msa1023200 MtrunA17_Chr7g0228891 59.722 72 29 0 6 77 17 88 2.78e-22 86.3
Msa1023200 MtrunA17_Chr1g0209661 55.556 72 32 0 6 77 32 103 3.11e-22 87.0
Msa1023200 MtrunA17_Chr8g0354661 51.389 72 35 0 6 77 42 113 4.74e-22 87.8
Msa1023200 MtrunA17_Chr4g0028311 54.795 73 32 1 6 77 17 89 7.37e-22 86.3
Msa1023200 MtrunA17_Chr3g0088461 51.389 72 35 0 6 77 27 98 8.22e-22 86.3
Msa1023200 MtrunA17_Chr4g0054391 56.164 73 31 1 6 77 17 89 1.10e-21 85.1
Msa1023200 MtrunA17_Chr2g0327351 54.795 73 32 1 6 77 17 89 1.16e-21 85.5
Msa1023200 MtrunA17_Chr1g0194301 52.778 72 34 0 6 77 38 109 1.38e-21 84.7
Msa1023200 MtrunA17_Chr5g0400821 56.164 73 31 1 6 77 17 89 1.91e-21 84.7
Msa1023200 MtrunA17_Chr1g0152011 54.795 73 32 1 6 77 17 89 2.57e-21 84.7
Msa1023200 MtrunA17_Chr3g0110351 56.944 72 31 0 6 77 17 88 2.72e-21 84.3
Msa1023200 MtrunA17_Chr1g0151941 52.055 73 34 1 6 77 17 89 2.93e-21 83.6
Msa1023200 MtrunA17_Chr3g0135311 56.164 73 31 1 6 77 17 89 3.17e-21 84.7
Msa1023200 MtrunA17_Chr1g0186061 52.778 72 34 0 6 77 25 96 4.09e-21 83.2
Msa1023200 MtrunA17_Chr7g0228231 53.425 73 34 0 5 77 18 90 6.85e-21 81.6
Msa1023200 MtrunA17_Chr6g0452271 51.389 72 35 0 6 77 17 88 7.92e-21 83.6
Msa1023200 MtrunA17_Chr6g0470971 50.000 72 36 0 6 77 19 90 8.93e-21 82.8
Msa1023200 MtrunA17_Chr1g0154031 48.611 72 37 0 6 77 81 152 9.94e-21 84.0
Msa1023200 MtrunA17_Chr1g0168661 52.778 72 34 0 6 77 26 97 1.70e-20 81.6
Msa1023200 MtrunA17_Chr6g0450101 53.425 73 34 0 5 77 18 90 2.34e-20 80.1
Msa1023200 MtrunA17_Chr7g0264641 52.055 73 34 1 6 77 17 89 2.59e-20 81.3
Msa1023200 MtrunA17_Chr4g0057031 54.795 73 33 0 5 77 16 88 3.04e-20 81.3
Msa1023200 MtrunA17_Chr5g0434901 76.596 47 11 0 31 77 3 49 5.08e-20 77.0
Msa1023200 MtrunA17_Chr5g0434571 56.164 73 32 0 5 77 52 124 5.55e-20 81.3
Msa1023200 MtrunA17_Chr4g0072751 54.795 73 32 1 6 77 17 89 1.95e-19 79.7
Msa1023200 MtrunA17_Chr2g0322521 52.778 72 34 0 6 77 34 105 3.62e-19 79.3
Msa1023200 MtrunA17_Chr7g0269831 54.167 72 33 0 6 77 17 88 3.71e-19 79.0
Msa1023200 MtrunA17_Chr1g0194291 52.778 72 34 0 6 77 26 97 3.99e-19 78.2
Msa1023200 MtrunA17_Chr1g0192411 47.945 73 38 0 5 77 16 88 7.33e-19 78.6
Msa1023200 MtrunA17_Chr5g0425591 45.070 71 39 0 5 75 13 83 9.48e-19 73.2
Msa1023200 MtrunA17_Chr7g0229101 69.565 46 14 0 32 77 3 48 2.71e-18 74.7
Msa1023200 MtrunA17_Chr7g0247131 65.957 47 16 0 31 77 8 54 2.89e-18 75.9
Msa1023200 MtrunA17_Chr5g0440761 45.455 66 36 0 6 71 17 82 3.85e-18 75.5
Msa1023200 MtrunA17_Chr5g0441141 45.455 66 36 0 6 71 17 82 4.03e-18 75.5
Msa1023200 MtrunA17_Chr1g0180391 49.315 73 37 0 5 77 23 95 5.23e-18 74.3
Msa1023200 MtrunA17_Chr5g0440781 43.662 71 40 0 5 75 16 86 1.99e-17 72.0
Msa1023200 MtrunA17_Chr7g0229131 65.217 46 16 0 32 77 3 48 3.14e-17 71.2
Msa1023200 MtrunA17_Chr2g0293911 52.778 72 34 0 6 77 29 100 3.22e-17 73.6
Msa1023200 MtrunA17_Chr4g0068921 52.778 72 34 0 6 77 29 100 5.64e-17 71.2
Msa1023200 MtrunA17_Chr2g0327821 43.056 72 41 0 6 77 11 82 5.04e-16 69.3
Msa1023200 MtrunA17_Chr5g0429661 47.945 73 35 2 6 77 125 195 2.61e-15 68.6
Msa1023200 MtrunA17_Chr4g0030881 39.241 79 41 1 6 77 12 90 4.77e-15 67.0
Msa1023200 MtrunA17_Chr4g0058991 43.836 73 38 2 6 77 212 282 7.38e-15 67.4
Msa1023200 MtrunA17_Chr5g0441131 40.000 70 42 0 6 75 14 83 1.59e-14 64.7
Msa1023200 MtrunA17_Chr6g0453751 42.308 78 37 2 6 75 25 102 1.83e-14 63.2
Msa1023200 MtrunA17_Chr4g0013361 42.466 73 41 1 6 77 15 87 3.38e-14 65.1
Msa1023200 MtrunA17_Chr8g0334881 41.096 73 42 1 6 77 15 87 4.56e-14 64.7
Msa1023200 MtrunA17_Chr4g0008551 42.466 73 39 2 6 77 41 111 5.54e-14 64.7
Msa1023200 MtrunA17_Chr7g0238651 43.243 74 40 1 6 77 10 83 5.77e-14 64.7
Msa1023200 MtrunA17_Chr1g0193901 43.636 55 31 0 3 57 14 68 2.83e-13 59.7
Msa1023200 MtrunA17_Chr1g0193891 43.636 55 31 0 3 57 14 68 2.83e-13 59.7
Msa1023200 MtrunA17_Chr1g0193871 43.636 55 31 0 3 57 14 68 2.83e-13 59.7
Msa1023200 MtrunA17_Chr1g0193881 43.636 55 31 0 3 57 14 68 2.83e-13 59.7
Msa1023200 MtrunA17_Chr6g0460661 45.205 73 37 2 6 77 19 89 3.02e-13 60.8
Msa1023200 MtrunA17_Chr3g0117511 42.466 73 39 2 6 77 186 256 7.18e-13 61.6
Msa1023200 MtrunA17_Chr4g0053431 38.889 72 43 1 6 77 8 78 2.56e-12 59.7
Msa1023200 MtrunA17_Chr6g0460671 41.667 72 41 1 6 77 102 172 5.04e-12 59.3
Msa1023200 MtrunA17_Chr6g0480581 42.466 73 39 2 6 77 7 77 5.28e-12 58.5
Msa1023200 MtrunA17_Chr4g0042501 41.096 73 40 2 6 77 108 178 5.55e-12 59.3
Msa1023200 MtrunA17_Chr6g0454921 38.889 72 43 1 6 77 18 88 6.34e-12 58.2
Msa1023200 MtrunA17_Chr5g0417621 42.466 73 39 2 6 77 137 207 6.46e-12 58.9
Msa1023200 MtrunA17_Chr5g0401731 35.526 76 40 2 6 77 18 88 1.13e-11 58.2
Msa1023200 MtrunA17_Chr3g0133601 38.356 73 42 2 6 77 40 110 2.19e-11 57.0
Msa1023200 MtrunA17_Chr7g0274481 36.986 73 44 2 2 74 7 77 3.27e-11 57.0
Msa1023200 MtrunA17_Chr7g0228531 36.111 72 44 2 6 77 223 292 9.02e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1023200 AT1G66370.1 71.233 73 21 0 5 77 12 84 5.76e-35 119
Msa1023200 AT1G66380.2 73.973 73 19 0 5 77 12 84 4.75e-33 110
Msa1023200 AT1G66380.1 73.973 73 19 0 5 77 12 84 4.52e-32 108
Msa1023200 AT1G56650.1 69.863 73 22 0 5 77 12 84 3.48e-30 107
Msa1023200 AT1G66390.1 72.603 73 20 0 5 77 12 84 1.20e-29 105
Msa1023200 AT1G22640.1 63.636 77 28 0 1 77 12 88 1.72e-29 105
Msa1023200 AT5G16770.4 63.889 72 26 0 6 77 17 88 3.13e-29 105
Msa1023200 AT5G16770.3 63.889 72 26 0 6 77 17 88 3.13e-29 105
Msa1023200 AT5G16770.1 63.889 72 26 0 6 77 17 88 4.09e-29 105
Msa1023200 AT5G16770.2 63.889 72 26 0 6 77 17 88 4.09e-29 105
Msa1023200 AT4G38620.1 64.384 73 26 0 5 77 16 88 7.81e-28 101
Msa1023200 AT3G02940.2 61.111 72 28 0 6 77 17 88 1.46e-27 101
Msa1023200 AT3G47600.1 62.500 72 27 0 6 77 17 88 2.14e-27 101
Msa1023200 AT5G35550.1 61.644 73 28 0 5 77 18 90 2.35e-27 99.8
Msa1023200 AT4G09460.1 60.274 73 29 0 5 77 16 88 2.52e-27 99.4
Msa1023200 AT3G02940.1 61.111 72 28 0 6 77 17 88 2.61e-27 100
Msa1023200 AT3G02940.3 61.111 72 28 0 6 77 17 88 2.61e-27 100
Msa1023200 AT5G14750.1 58.333 72 30 0 6 77 21 92 2.71e-27 98.2
Msa1023200 AT2G16720.1 59.740 77 31 0 1 77 12 88 7.03e-27 99.0
Msa1023200 AT5G54230.1 61.111 72 28 0 6 77 17 88 7.49e-27 99.8
Msa1023200 AT3G13890.2 56.944 72 31 0 6 77 17 88 1.11e-26 99.8
Msa1023200 AT5G40330.1 55.556 72 32 0 6 77 17 88 1.78e-26 96.7
Msa1023200 AT1G74650.1 62.500 72 27 0 6 77 17 88 1.87e-26 99.0
Msa1023200 AT4G21440.1 59.722 72 29 0 6 77 17 88 2.14e-26 99.0
Msa1023200 AT4G34990.1 61.644 73 28 0 5 77 16 88 2.43e-26 97.4
Msa1023200 AT5G62470.2 62.500 72 27 0 6 77 17 88 2.62e-26 98.6
Msa1023200 AT5G60890.1 58.904 73 30 0 5 77 16 88 3.09e-26 97.4
Msa1023200 AT3G28910.1 62.025 79 27 1 2 77 10 88 3.14e-26 98.2
Msa1023200 AT5G10280.1 55.556 72 32 0 6 77 17 88 3.19e-26 98.2
Msa1023200 AT1G34670.1 58.333 72 30 0 6 77 17 88 3.36e-26 98.6
Msa1023200 AT3G12720.1 54.167 72 33 0 6 77 27 98 3.43e-26 97.8
Msa1023200 AT3G13540.1 56.944 72 31 0 6 77 28 99 3.80e-26 96.3
Msa1023200 AT1G57560.1 59.722 72 29 0 6 77 17 88 4.02e-26 97.8
Msa1023200 AT4G17785.1 58.333 72 30 0 6 77 18 89 4.42e-26 98.2
Msa1023200 AT2G47460.1 61.111 72 28 0 6 77 17 88 5.26e-26 98.2
Msa1023200 AT1G09540.1 59.722 72 29 0 6 77 17 88 5.35e-26 98.2
Msa1023200 AT4G17785.2 58.333 72 30 0 6 77 18 89 5.87e-26 97.8
Msa1023200 AT1G35515.1 57.143 77 33 0 1 77 12 88 5.92e-26 95.1
Msa1023200 AT1G57560.2 59.722 72 29 0 6 77 17 88 8.02e-26 96.3
Msa1023200 AT3G27920.1 55.556 72 32 0 6 77 19 90 8.09e-26 95.1
Msa1023200 AT5G65230.1 58.333 72 30 0 6 77 17 88 8.33e-26 96.7
Msa1023200 AT3G23250.1 56.944 72 31 0 6 77 17 88 9.22e-26 96.3
Msa1023200 AT3G61250.1 56.944 72 31 0 6 77 17 88 9.55e-26 96.3
Msa1023200 AT4G28110.1 56.944 72 31 0 6 77 17 88 1.07e-25 95.9
Msa1023200 AT5G49330.1 63.889 72 26 0 6 77 17 88 1.36e-25 96.7
Msa1023200 AT1G74080.1 56.164 73 32 0 5 77 16 88 1.60e-25 96.3
Msa1023200 AT2G31180.1 58.333 72 30 0 6 77 17 88 3.02e-25 94.0
Msa1023200 AT4G01680.1 56.944 72 31 0 6 77 17 88 5.53e-25 95.1
Msa1023200 AT5G61420.2 56.164 73 32 0 5 77 16 88 5.70e-25 95.5
Msa1023200 AT5G07690.1 56.164 73 32 0 5 77 16 88 6.07e-25 94.7
Msa1023200 AT1G18570.1 57.534 73 31 0 5 77 17 89 6.15e-25 95.1
Msa1023200 AT5G07700.1 56.164 73 32 0 5 77 16 88 7.19e-25 94.7
Msa1023200 AT5G07700.2 56.164 73 32 0 5 77 16 88 7.19e-25 94.7
Msa1023200 AT4G01680.3 56.944 72 31 0 6 77 17 88 7.21e-25 92.8
Msa1023200 AT3G62610.1 61.111 72 28 0 6 77 17 88 7.88e-25 94.7
Msa1023200 AT1G06180.1 58.333 72 30 0 6 77 17 88 9.02e-25 92.8
Msa1023200 AT5G26660.1 56.944 72 31 0 6 77 17 88 1.01e-24 94.4
Msa1023200 AT5G62470.1 62.500 72 26 1 6 77 17 87 1.11e-24 94.4
Msa1023200 AT5G15310.1 58.333 72 30 0 6 77 17 88 1.21e-24 94.0
Msa1023200 AT5G15310.2 58.333 72 30 0 6 77 17 88 1.45e-24 93.6
Msa1023200 AT3G01140.1 58.333 72 30 0 6 77 60 131 1.98e-24 94.0
Msa1023200 AT4G05100.1 56.944 72 31 0 6 77 18 89 2.59e-24 93.2
Msa1023200 AT3G01140.2 58.333 72 30 0 6 77 17 88 3.74e-24 92.8
Msa1023200 AT1G08810.1 59.722 72 29 0 6 77 17 88 5.24e-24 91.7
Msa1023200 AT5G15310.4 57.534 73 31 0 5 77 16 88 5.76e-24 90.9
Msa1023200 AT3G13890.1 50.617 81 31 1 6 77 17 97 9.07e-24 92.0
Msa1023200 AT1G74430.1 61.111 72 28 0 6 77 17 88 1.02e-23 90.5
Msa1023200 AT1G63910.1 55.556 72 32 0 6 77 17 88 1.16e-23 92.0
Msa1023200 AT5G23000.1 57.534 73 30 1 6 77 17 89 1.36e-23 91.3
Msa1023200 AT5G52600.1 54.167 72 33 0 6 77 17 88 2.34e-23 88.2
Msa1023200 AT1G56160.1 52.778 72 34 0 6 77 19 90 3.85e-23 89.4
Msa1023200 AT3G01530.1 56.944 72 31 0 6 77 30 101 4.91e-23 87.4
Msa1023200 AT1G79180.1 55.556 72 32 0 6 77 19 90 6.53e-23 89.0
Msa1023200 AT2G47190.1 54.167 72 33 0 6 77 25 96 6.63e-23 88.6
Msa1023200 AT3G28470.1 50.000 72 36 0 6 77 17 88 8.03e-23 89.0
Msa1023200 AT5G56110.1 56.944 72 31 0 6 77 17 88 8.68e-23 89.0
Msa1023200 AT2G26960.1 50.000 72 36 0 6 77 25 96 8.81e-23 90.1
Msa1023200 AT4G01680.2 50.000 84 30 1 6 77 17 100 1.08e-22 89.0
Msa1023200 AT3G30210.1 54.167 72 33 0 6 77 32 103 2.41e-22 87.0
Msa1023200 AT5G12870.1 51.389 72 35 0 6 77 23 94 3.22e-22 86.7
Msa1023200 AT1G18710.1 55.556 72 32 0 6 77 17 88 4.16e-22 86.3
Msa1023200 AT2G32460.1 50.000 72 36 0 6 77 23 94 4.25e-22 88.2
Msa1023200 AT5G06100.1 50.000 72 36 0 6 77 37 108 4.54e-22 88.2
Msa1023200 AT2G32460.2 50.000 72 36 0 6 77 11 82 4.75e-22 88.2
Msa1023200 AT3G11440.3 48.611 72 37 0 6 77 46 117 5.25e-22 88.2
Msa1023200 AT3G11440.4 48.611 72 37 0 6 77 46 117 5.25e-22 88.2
Msa1023200 AT3G11440.1 48.611 72 37 0 6 77 46 117 5.25e-22 88.2
Msa1023200 AT3G11440.2 48.611 72 37 0 6 77 46 117 5.38e-22 87.8
Msa1023200 AT5G55020.1 50.000 72 36 0 6 77 31 102 5.70e-22 87.8
Msa1023200 AT5G06100.5 50.000 72 36 0 6 77 37 108 5.97e-22 87.8
Msa1023200 AT5G06100.2 50.000 72 36 0 6 77 37 108 5.97e-22 87.8
Msa1023200 AT5G06100.3 50.000 72 36 0 6 77 37 108 5.97e-22 87.8
Msa1023200 AT5G06100.4 50.000 72 36 0 6 77 37 108 5.97e-22 87.8
Msa1023200 AT4G26930.1 50.000 72 36 0 6 77 24 95 7.14e-22 87.0
Msa1023200 AT1G16490.1 52.778 72 34 0 6 77 19 90 7.83e-22 85.5
Msa1023200 AT1G68320.1 55.556 72 32 0 6 77 24 95 9.69e-22 85.5
Msa1023200 AT3G12820.1 52.055 73 35 0 5 77 18 90 1.40e-21 84.3
Msa1023200 AT4G12350.1 54.167 72 33 0 6 77 17 88 1.41e-21 85.1
Msa1023200 AT3G24310.1 54.795 73 33 0 5 77 22 94 5.09e-21 83.6
Msa1023200 AT5G14340.1 57.534 73 31 0 5 77 28 100 6.15e-21 83.2
Msa1023200 AT3G08500.1 50.000 72 36 0 6 77 35 106 6.69e-21 84.0
Msa1023200 AT1G25340.1 54.167 72 33 0 6 77 23 94 7.01e-21 83.2
Msa1023200 AT3G48920.1 48.611 72 37 0 6 77 23 94 7.98e-21 82.8
Msa1023200 AT5G52260.1 58.333 72 30 0 6 77 17 88 1.11e-20 82.4
Msa1023200 AT4G13480.1 53.425 73 34 0 5 77 10 82 1.48e-20 82.0
Msa1023200 AT4G37780.1 50.685 73 35 1 6 77 17 89 1.56e-20 82.8
Msa1023200 AT5G57620.1 56.164 73 31 1 6 77 17 89 1.57e-20 83.2
Msa1023200 AT5G65790.1 54.795 73 32 1 6 77 17 89 1.91e-20 83.2
Msa1023200 AT5G40350.1 54.167 72 33 0 6 77 22 93 2.15e-20 80.9
Msa1023200 AT3G49690.1 54.795 73 32 1 6 77 17 89 2.63e-20 82.0
Msa1023200 AT3G27810.1 52.778 72 34 0 6 77 25 96 3.03e-20 80.5
Msa1023200 AT1G48000.1 54.167 72 33 0 6 77 37 108 4.58e-20 80.5
Msa1023200 AT5G62320.1 51.250 80 32 1 5 77 17 96 6.76e-20 80.1
Msa1023200 AT4G22680.1 51.389 72 35 0 6 77 17 88 6.80e-20 80.5
Msa1023200 AT2G36890.2 54.795 73 32 1 6 77 58 130 1.02e-19 80.9
Msa1023200 AT2G36890.1 54.054 74 33 1 5 77 16 89 1.08e-19 80.5
Msa1023200 AT1G66230.1 53.425 73 34 0 5 77 16 88 1.91e-19 79.3
Msa1023200 AT4G25560.1 51.389 72 35 0 6 77 15 86 2.10e-19 79.3
Msa1023200 AT2G26950.1 44.444 72 40 0 6 77 21 92 3.63e-19 79.7
Msa1023200 AT5G16600.1 52.778 72 34 0 6 77 17 88 3.96e-19 79.3
Msa1023200 AT3G53200.1 50.000 72 36 0 6 77 14 85 5.51e-19 77.4
Msa1023200 AT5G59780.3 46.575 73 39 0 5 77 12 84 3.30e-18 75.5
Msa1023200 AT3G46130.1 45.833 72 39 0 6 77 14 85 6.37e-18 75.1
Msa1023200 AT1G25340.2 51.389 72 30 1 6 77 23 89 1.03e-17 74.7
Msa1023200 AT5G14750.3 73.171 41 11 0 37 77 18 58 1.16e-17 72.8
Msa1023200 AT1G25340.3 51.389 72 30 1 6 77 23 89 1.89e-17 74.3
Msa1023200 AT3G47600.2 72.727 44 12 0 34 77 39 82 2.70e-17 74.3
Msa1023200 AT5G35550.2 67.391 46 15 0 32 77 48 93 3.55e-17 73.2
Msa1023200 AT3G06490.1 54.167 72 33 0 6 77 24 95 3.56e-17 73.9
Msa1023200 AT1G79180.2 37.143 105 33 1 6 77 19 123 5.32e-17 73.6
Msa1023200 AT5G26660.2 63.636 44 16 0 34 77 14 57 2.03e-16 71.6
Msa1023200 AT5G49620.1 52.778 72 34 0 6 77 31 102 5.06e-16 70.5
Msa1023200 AT5G49620.2 52.113 71 34 0 6 76 31 101 2.62e-15 68.6
Msa1023200 AT1G66380.3 71.739 46 13 0 32 77 6 51 9.52e-15 63.5
Msa1023200 AT4G18770.1 43.836 73 38 2 6 77 220 290 1.09e-14 67.4
Msa1023200 AT3G27785.1 45.205 73 37 2 6 77 192 262 2.10e-14 66.6
Msa1023200 AT5G40360.1 37.662 77 47 1 1 77 156 231 2.65e-14 66.2
Msa1023200 AT2G37630.1 43.243 74 40 1 6 77 7 80 5.90e-14 65.1
Msa1023200 AT3G12820.2 63.415 41 15 0 37 77 2 42 1.22e-13 62.8
Msa1023200 AT4G33450.1 45.205 73 37 2 6 77 22 92 2.50e-13 62.8
Msa1023200 AT3G60460.1 39.726 73 43 1 6 77 16 88 2.60e-13 63.2
Msa1023200 AT5G58850.1 43.836 73 38 2 6 77 108 178 2.71e-13 63.2
Msa1023200 AT5G11510.3 38.356 73 42 2 6 77 84 154 4.49e-13 62.8
Msa1023200 AT5G11510.1 38.356 73 42 2 6 77 84 154 4.49e-13 62.8
Msa1023200 AT5G11510.4 38.356 73 42 2 6 77 84 154 4.49e-13 62.8
Msa1023200 AT3G27810.2 57.447 47 20 0 31 77 1 47 4.85e-13 60.8
Msa1023200 AT5G11050.1 43.836 73 38 2 6 77 108 178 5.53e-13 62.4
Msa1023200 AT5G11510.2 38.356 73 42 2 6 77 84 154 7.63e-13 62.0
Msa1023200 AT5G11510.5 38.356 73 42 2 6 77 84 154 8.56e-13 62.0
Msa1023200 AT1G69560.2 43.836 73 38 2 6 77 126 196 1.77e-12 60.8
Msa1023200 AT1G17950.1 42.466 73 39 2 6 77 8 78 1.80e-12 60.5
Msa1023200 AT4G37260.1 38.889 72 43 1 6 77 16 86 1.85e-12 60.8
Msa1023200 AT5G40350.2 61.364 44 17 0 34 77 5 48 1.86e-12 59.3
Msa1023200 AT3G55730.1 41.096 73 40 2 6 77 59 129 2.07e-12 60.8
Msa1023200 AT1G69560.1 43.836 73 38 2 6 77 110 180 2.21e-12 60.5
Msa1023200 AT1G26780.2 42.308 78 42 2 1 77 96 171 9.15e-12 58.9
Msa1023200 AT3G53200.2 53.061 49 23 0 29 77 4 52 1.56e-11 57.4
Msa1023200 AT3G50060.1 38.356 73 42 2 6 77 9 79 1.64e-11 58.2
Msa1023200 AT2G25230.1 39.744 78 44 2 1 77 24 99 1.78e-11 57.4
Msa1023200 AT1G73410.1 46.575 73 36 2 6 77 9 79 1.86e-11 57.8
Msa1023200 AT3G09230.1 36.842 76 39 2 6 77 58 128 2.36e-11 57.8
Msa1023200 AT5G67300.1 36.842 76 39 2 6 77 9 79 3.61e-11 57.0
Msa1023200 AT3G46130.4 46.774 62 29 1 16 77 6 63 4.43e-11 56.6
Msa1023200 AT1G09770.1 38.356 73 43 2 2 74 7 77 7.10e-11 56.6
Msa1023200 AT3G46130.3 52.174 46 22 0 32 77 8 53 7.24e-11 55.8
Msa1023200 AT1G73410.2 46.575 73 36 2 6 77 9 79 7.26e-11 55.5
Msa1023200 AT4G32730.5 34.247 73 45 2 6 77 90 160 7.71e-11 56.6
Msa1023200 AT4G32730.4 34.247 73 45 2 6 77 90 160 7.71e-11 56.6
Msa1023200 AT4G32730.3 34.247 73 45 2 6 77 90 160 7.71e-11 56.6
Msa1023200 AT4G32730.2 34.247 73 45 2 6 77 90 160 7.71e-11 56.6
Msa1023200 AT1G26780.1 42.308 78 42 2 1 77 96 171 7.98e-11 56.2
Msa1023200 AT2G23290.1 37.500 72 44 1 6 77 16 86 8.91e-11 56.2

Find 18 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAACTCCACAAATTATT+AGG 0.284949 7_1:-50546132 Msa1023200:CDS
AAATTTCCTCTCTTTATGTT+AGG 0.329738 7_1:+50546180 None:intergenic
ACCTGTTGCCTAATAATTTG+TGG 0.373594 7_1:+50546124 None:intergenic
AAGAAATGCATACAACAATA+TGG 0.380233 7_1:-50546832 Msa1023200:CDS
ACAGATGCAGAAAGAGTTGT+AGG 0.382591 7_1:-50546227 Msa1023200:CDS
GTGGCATAGGGTTCCACTAT+TGG 0.406540 7_1:-50546800 Msa1023200:CDS
TTGAAGAGTTTCATAAGAGA+TGG 0.432499 7_1:-50546893 Msa1023200:exon
TCCACAAATTATTAGGCAAC+AGG 0.435343 7_1:-50546125 Msa1023200:CDS
GAAAGAGTTGTAGGCTAAGA+TGG 0.478279 7_1:-50546218 Msa1023200:CDS
TGAAGAGTTTCATAAGAGAT+GGG 0.479761 7_1:-50546892 Msa1023200:exon
AACAATATGGTGAAGGAAAG+TGG 0.501654 7_1:-50546819 Msa1023200:CDS
CATAGGGTTCCACTATTGGC+TGG 0.537883 7_1:-50546796 Msa1023200:intron
ATGGTGAAGGAAAGTGGCAT+AGG 0.546971 7_1:-50546813 Msa1023200:CDS
TGCATACAACAATATGGTGA+AGG 0.582605 7_1:-50546826 Msa1023200:CDS
TGGTGAAGGAAAGTGGCATA+GGG 0.591311 7_1:-50546812 Msa1023200:CDS
AAGAGATGGGTGGTGTTGCA+TGG 0.595869 7_1:-50546879 Msa1023200:exon
CTACGTCCTAACATAAAGAG+AGG 0.645909 7_1:-50546186 Msa1023200:CDS
AGAGTTTCATAAGAGATGGG+TGG 0.667150 7_1:-50546889 Msa1023200:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAAAAAATCAAGAAAA+AGG + chr7_1:50546285-50546304 None:intergenic 15.0%
!! AATAGAAAAAATCAAGAAAA+AGG + chr7_1:50546285-50546304 None:intergenic 15.0%
! AAGAAATGCATACAACAATA+TGG - chr7_1:50546201-50546220 Msa1023200:CDS 25.0%
!!! TTAAATATCCGTTTTTGAGA+AGG + chr7_1:50546310-50546329 None:intergenic 25.0%
!!! ATAATGAGATCCGTTTTAAA+AGG + chr7_1:50546420-50546439 None:intergenic 25.0%
!!! ATCTCATTATTTTGAGAGAT+TGG - chr7_1:50546430-50546449 Msa1023200:intron 25.0%
!!! TCTTCATTATTTTGAGAGAT+TGG - chr7_1:50546615-50546634 Msa1023200:intron 25.0%
! AATCAACTTAGTAAGTATGT+TGG + chr7_1:50546744-50546763 None:intergenic 25.0%
!! TTTCTTTTTCCATCAAACAT+TGG - chr7_1:50546767-50546786 Msa1023200:intron 25.0%
! AAATTTCCTCTCTTTATGTT+AGG + chr7_1:50546856-50546875 None:intergenic 25.0%
! AAGAAATGCATACAACAATA+TGG - chr7_1:50546201-50546220 Msa1023200:CDS 25.0%
!!! TTAAATATCCGTTTTTGAGA+AGG + chr7_1:50546310-50546329 None:intergenic 25.0%
!!! ATAATGAGATCCGTTTTAAA+AGG + chr7_1:50546420-50546439 None:intergenic 25.0%
!!! ATCTCATTATTTTGAGAGAT+TGG - chr7_1:50546430-50546449 Msa1023200:intron 25.0%
!!! TCTTCATTATTTTGAGAGAT+TGG - chr7_1:50546615-50546634 Msa1023200:intron 25.0%
! AATCAACTTAGTAAGTATGT+TGG + chr7_1:50546744-50546763 None:intergenic 25.0%
!! TTTCTTTTTCCATCAAACAT+TGG - chr7_1:50546767-50546786 Msa1023200:intron 25.0%
! AAATTTCCTCTCTTTATGTT+AGG + chr7_1:50546856-50546875 None:intergenic 25.0%
TTGAAGAGTTTCATAAGAGA+TGG - chr7_1:50546140-50546159 Msa1023200:CDS 30.0%
TGAAGAGTTTCATAAGAGAT+GGG - chr7_1:50546141-50546160 Msa1023200:CDS 30.0%
TCTATTTGCCTTCTCAAAAA+CGG - chr7_1:50546299-50546318 Msa1023200:intron 30.0%
!! TCAACTGTGACCTTTTAAAA+CGG - chr7_1:50546407-50546426 Msa1023200:intron 30.0%
!! TCATTTTAATAGTGAACCCA+AGG + chr7_1:50546478-50546497 None:intergenic 30.0%
CTCTTGAAGTATGTTATCTA+AGG - chr7_1:50546518-50546537 Msa1023200:intron 30.0%
CGATCTCTAACAAATATGTA+TGG - chr7_1:50546543-50546562 Msa1023200:intron 30.0%
TCAATTTAATAGTGAACCCA+AGG + chr7_1:50546663-50546682 None:intergenic 30.0%
TTCAACAAACCAATGTTTGA+TGG + chr7_1:50546779-50546798 None:intergenic 30.0%
!! ATCAAACATTGGTTTGTTGA+AGG - chr7_1:50546778-50546797 Msa1023200:intron 30.0%
GTCAAACTCCACAAATTATT+AGG - chr7_1:50546901-50546920 Msa1023200:five_prime_UTR 30.0%
TTGAAGAGTTTCATAAGAGA+TGG - chr7_1:50546140-50546159 Msa1023200:CDS 30.0%
TGAAGAGTTTCATAAGAGAT+GGG - chr7_1:50546141-50546160 Msa1023200:CDS 30.0%
TCTATTTGCCTTCTCAAAAA+CGG - chr7_1:50546299-50546318 Msa1023200:intron 30.0%
!! TCAACTGTGACCTTTTAAAA+CGG - chr7_1:50546407-50546426 Msa1023200:intron 30.0%
!! TCATTTTAATAGTGAACCCA+AGG + chr7_1:50546478-50546497 None:intergenic 30.0%
CTCTTGAAGTATGTTATCTA+AGG - chr7_1:50546518-50546537 Msa1023200:intron 30.0%
CGATCTCTAACAAATATGTA+TGG - chr7_1:50546543-50546562 Msa1023200:intron 30.0%
TCAATTTAATAGTGAACCCA+AGG + chr7_1:50546663-50546682 None:intergenic 30.0%
TTCAACAAACCAATGTTTGA+TGG + chr7_1:50546779-50546798 None:intergenic 30.0%
!! ATCAAACATTGGTTTGTTGA+AGG - chr7_1:50546778-50546797 Msa1023200:intron 30.0%
GTCAAACTCCACAAATTATT+AGG - chr7_1:50546901-50546920 Msa1023200:five_prime_UTR 30.0%
TGCATACAACAATATGGTGA+AGG - chr7_1:50546207-50546226 Msa1023200:CDS 35.0%
AACAATATGGTGAAGGAAAG+TGG - chr7_1:50546214-50546233 Msa1023200:CDS 35.0%
! TAACTTTTACCAGCCAATAG+TGG + chr7_1:50546249-50546268 None:intergenic 35.0%
TCTTTGAACTATGTCATCTG+AGG - chr7_1:50546335-50546354 Msa1023200:intron 35.0%
CGATCTCTGACAAATATGTA+TGG - chr7_1:50546360-50546379 Msa1023200:intron 35.0%
TAATGAAGATCCGTCTTAAG+AGG + chr7_1:50546604-50546623 None:intergenic 35.0%
ATTGGTCCATACTCTTAACT+AGG - chr7_1:50546633-50546652 Msa1023200:intron 35.0%
! GGTTTTCCTAGTTAAGAGTA+TGG + chr7_1:50546642-50546661 None:intergenic 35.0%
ACTCTTAACTAGGAAAACCT+TGG - chr7_1:50546643-50546662 Msa1023200:intron 35.0%
CTCTTAACTAGGAAAACCTT+GGG - chr7_1:50546644-50546663 Msa1023200:intron 35.0%
ACTTGTTCAATCTTAGCACT+TGG - chr7_1:50546702-50546721 Msa1023200:intron 35.0%
! AAAGAGAGGAAATTTTGCTG+AGG - chr7_1:50546861-50546880 Msa1023200:CDS 35.0%
TCCACAAATTATTAGGCAAC+AGG - chr7_1:50546908-50546927 Msa1023200:five_prime_UTR 35.0%
ACCTGTTGCCTAATAATTTG+TGG + chr7_1:50546912-50546931 None:intergenic 35.0%
TGCATACAACAATATGGTGA+AGG - chr7_1:50546207-50546226 Msa1023200:CDS 35.0%
AACAATATGGTGAAGGAAAG+TGG - chr7_1:50546214-50546233 Msa1023200:CDS 35.0%
! TAACTTTTACCAGCCAATAG+TGG + chr7_1:50546249-50546268 None:intergenic 35.0%
TCTTTGAACTATGTCATCTG+AGG - chr7_1:50546335-50546354 Msa1023200:intron 35.0%
CGATCTCTGACAAATATGTA+TGG - chr7_1:50546360-50546379 Msa1023200:intron 35.0%
TAATGAAGATCCGTCTTAAG+AGG + chr7_1:50546604-50546623 None:intergenic 35.0%
ATTGGTCCATACTCTTAACT+AGG - chr7_1:50546633-50546652 Msa1023200:intron 35.0%
! GGTTTTCCTAGTTAAGAGTA+TGG + chr7_1:50546642-50546661 None:intergenic 35.0%
ACTCTTAACTAGGAAAACCT+TGG - chr7_1:50546643-50546662 Msa1023200:intron 35.0%
CTCTTAACTAGGAAAACCTT+GGG - chr7_1:50546644-50546663 Msa1023200:intron 35.0%
ACTTGTTCAATCTTAGCACT+TGG - chr7_1:50546702-50546721 Msa1023200:intron 35.0%
! AAAGAGAGGAAATTTTGCTG+AGG - chr7_1:50546861-50546880 Msa1023200:CDS 35.0%
TCCACAAATTATTAGGCAAC+AGG - chr7_1:50546908-50546927 Msa1023200:five_prime_UTR 35.0%
ACCTGTTGCCTAATAATTTG+TGG + chr7_1:50546912-50546931 None:intergenic 35.0%
AGAGTTTCATAAGAGATGGG+TGG - chr7_1:50546144-50546163 Msa1023200:CDS 40.0%
ATTGGTCCATACTCTTGACT+AGG - chr7_1:50546448-50546467 Msa1023200:intron 40.0%
! GGTTTTCCTAGTCAAGAGTA+TGG + chr7_1:50546457-50546476 None:intergenic 40.0%
ACTCTTGACTAGGAAAACCT+TGG - chr7_1:50546458-50546477 Msa1023200:intron 40.0%
CTCTTGACTAGGAAAACCTT+GGG - chr7_1:50546459-50546478 Msa1023200:intron 40.0%
ACAGATGCAGAAAGAGTTGT+AGG - chr7_1:50546806-50546825 Msa1023200:CDS 40.0%
GAAAGAGTTGTAGGCTAAGA+TGG - chr7_1:50546815-50546834 Msa1023200:CDS 40.0%
CTACGTCCTAACATAAAGAG+AGG - chr7_1:50546847-50546866 Msa1023200:CDS 40.0%
! AAATTTTGCTGAGGAGGAAG+TGG - chr7_1:50546870-50546889 Msa1023200:CDS 40.0%
AGAGTTTCATAAGAGATGGG+TGG - chr7_1:50546144-50546163 Msa1023200:CDS 40.0%
ATTGGTCCATACTCTTGACT+AGG - chr7_1:50546448-50546467 Msa1023200:intron 40.0%
! GGTTTTCCTAGTCAAGAGTA+TGG + chr7_1:50546457-50546476 None:intergenic 40.0%
ACTCTTGACTAGGAAAACCT+TGG - chr7_1:50546458-50546477 Msa1023200:intron 40.0%
CTCTTGACTAGGAAAACCTT+GGG - chr7_1:50546459-50546478 Msa1023200:intron 40.0%
ACAGATGCAGAAAGAGTTGT+AGG - chr7_1:50546806-50546825 Msa1023200:CDS 40.0%
GAAAGAGTTGTAGGCTAAGA+TGG - chr7_1:50546815-50546834 Msa1023200:CDS 40.0%
CTACGTCCTAACATAAAGAG+AGG - chr7_1:50546847-50546866 Msa1023200:CDS 40.0%
! AAATTTTGCTGAGGAGGAAG+TGG - chr7_1:50546870-50546889 Msa1023200:CDS 40.0%
ATGGTGAAGGAAAGTGGCAT+AGG - chr7_1:50546220-50546239 Msa1023200:CDS 45.0%
TGGTGAAGGAAAGTGGCATA+GGG - chr7_1:50546221-50546240 Msa1023200:CDS 45.0%
CAACTGTCGACCTCTTAAGA+CGG - chr7_1:50546591-50546610 Msa1023200:intron 45.0%
! GAGAGGAAATTTTGCTGAGG+AGG - chr7_1:50546864-50546883 Msa1023200:CDS 45.0%
ATGGTGAAGGAAAGTGGCAT+AGG - chr7_1:50546220-50546239 Msa1023200:CDS 45.0%
TGGTGAAGGAAAGTGGCATA+GGG - chr7_1:50546221-50546240 Msa1023200:CDS 45.0%
CAACTGTCGACCTCTTAAGA+CGG - chr7_1:50546591-50546610 Msa1023200:intron 45.0%
! GAGAGGAAATTTTGCTGAGG+AGG - chr7_1:50546864-50546883 Msa1023200:CDS 45.0%
!! AAGAGATGGGTGGTGTTGCA+TGG - chr7_1:50546154-50546173 Msa1023200:CDS 50.0%
GTGGCATAGGGTTCCACTAT+TGG - chr7_1:50546233-50546252 Msa1023200:CDS 50.0%
CATAGGGTTCCACTATTGGC+TGG - chr7_1:50546237-50546256 Msa1023200:intron 50.0%
!! AAGAGATGGGTGGTGTTGCA+TGG - chr7_1:50546154-50546173 Msa1023200:CDS 50.0%
GTGGCATAGGGTTCCACTAT+TGG - chr7_1:50546233-50546252 Msa1023200:CDS 50.0%
CATAGGGTTCCACTATTGGC+TGG - chr7_1:50546237-50546256 Msa1023200:intron 50.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 50546122 50546933 50546122 ID=Msa1023200;Name=Msa1023200
chr7_1 mRNA 50546122 50546933 50546122 ID=Msa1023200-mRNA-1;Parent=Msa1023200;Name=Msa1023200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=37|1|0.5|1|1|1|2|0|77
chr7_1 exon 50546122 50546255 50546122 ID=Msa1023200-mRNA-1:exon:9925;Parent=Msa1023200-mRNA-1
chr7_1 exon 50546797 50546933 50546797 ID=Msa1023200-mRNA-1:exon:9924;Parent=Msa1023200-mRNA-1
chr7_1 five_prime_UTR 50546897 50546933 50546897 ID=Msa1023200-mRNA-1:five_prime_utr;Parent=Msa1023200-mRNA-1
chr7_1 CDS 50546797 50546896 50546797 ID=Msa1023200-mRNA-1:cds;Parent=Msa1023200-mRNA-1
chr7_1 CDS 50546122 50546255 50546122 ID=Msa1023200-mRNA-1:cds;Parent=Msa1023200-mRNA-1
Gene Sequence

>Msa1023200

ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACTTGCTTAAGAAATGCATACAACAATATGGTGAAGGAAAGTGGCATAGGGTTCCACTATTGGCTGGTCTAAACAGATGCAGAAAGAGTTGTAGGCTAAGATGGTTGAACTATCTACGTCCTAACATAAAGAGAGGAAATTTTGCTGAGGAGGAAGTGGAAATGATTGTCAAACTCCACAAATTATTAGGCAACAGGTAA

Protein sequence

>Msa1023200

MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFAEEEVEMIVKLHKLLGNR*