AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1107440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107440 MtrunA17_Chr7g0240821 97.380 229 6 0 1 229 1 229 2.23e-169 465
Msa1107440 MtrunA17_Chr5g0434931 65.909 132 42 1 5 133 39 170 7.04e-57 182
Msa1107440 MtrunA17_Chr7g0228991 67.164 134 41 1 5 135 33 166 1.33e-56 181
Msa1107440 MtrunA17_Chr5g0434911 41.803 244 117 6 5 223 25 268 1.11e-55 179
Msa1107440 MtrunA17_Chr7g0220341 42.917 240 114 7 5 226 29 263 3.76e-54 175
Msa1107440 MtrunA17_Chr5g0434831 54.070 172 63 4 5 160 11 182 1.11e-53 171
Msa1107440 MtrunA17_Chr5g0434841 43.825 251 99 10 5 223 24 264 8.29e-53 172
Msa1107440 MtrunA17_Chr8g0360111 54.248 153 63 2 2 147 23 175 6.44e-50 163
Msa1107440 MtrunA17_Chr4g0055981 61.157 121 47 0 1 121 55 175 1.82e-49 161
Msa1107440 MtrunA17_Chr4g0070611 57.724 123 52 0 5 127 16 138 3.11e-47 158
Msa1107440 MtrunA17_Chr4g0070641 57.724 123 52 0 5 127 16 138 4.20e-47 153
Msa1107440 MtrunA17_Chr7g0275911 67.327 101 33 0 5 105 16 116 3.83e-46 154
Msa1107440 MtrunA17_Chr5g0435101 58.333 120 50 0 5 124 15 134 1.04e-45 151
Msa1107440 MtrunA17_Chr4g0037141 67.327 101 33 0 5 105 16 116 3.24e-45 152
Msa1107440 MtrunA17_Chr8g0346561 66.337 101 34 0 5 105 16 116 4.21e-45 152
Msa1107440 MtrunA17_Chr1g0187761 58.772 114 47 0 6 119 17 130 1.24e-44 150
Msa1107440 MtrunA17_Chr3g0121241 64.356 101 36 0 5 105 46 146 2.75e-44 150
Msa1107440 MtrunA17_Chr3g0131121 51.471 136 62 1 5 136 16 151 4.17e-43 147
Msa1107440 MtrunA17_Chr3g0115821 63.366 101 37 0 5 105 16 116 1.55e-42 147
Msa1107440 MtrunA17_Chr8g0343831 64.356 101 36 0 5 105 12 112 1.68e-42 144
Msa1107440 MtrunA17_Chr4g0039971 62.376 101 38 0 5 105 17 117 2.11e-42 147
Msa1107440 MtrunA17_Chr4g0060721 56.589 129 50 2 5 132 17 140 3.22e-42 145
Msa1107440 MtrunA17_Chr7g0274581 60.000 105 42 0 6 110 17 121 8.13e-42 141
Msa1107440 MtrunA17_Chr7g0217221 51.079 139 61 1 5 143 16 147 8.95e-42 143
Msa1107440 MtrunA17_Chr4g0044421 64.356 101 36 0 5 105 16 116 9.15e-42 140
Msa1107440 MtrunA17_Chr7g0254411 57.759 116 49 0 5 120 16 131 1.11e-41 144
Msa1107440 MtrunA17_Chr4g0068061 50.000 140 65 1 6 145 17 151 2.52e-41 143
Msa1107440 MtrunA17_Chr1g0167661 50.000 138 67 1 5 140 16 153 2.74e-41 141
Msa1107440 MtrunA17_Chr4g0022931 54.237 118 54 0 5 122 17 134 3.54e-41 141
Msa1107440 MtrunA17_Chr1g0194951 52.308 130 61 1 6 135 17 145 4.17e-41 144
Msa1107440 MtrunA17_Chr5g0395281 59.406 101 41 0 5 105 16 116 7.85e-41 141
Msa1107440 MtrunA17_Chr8g0385321 55.652 115 51 0 5 119 16 130 1.06e-40 141
Msa1107440 MtrunA17_Chr3g0092401 57.143 112 48 0 5 116 17 128 1.45e-40 140
Msa1107440 MtrunA17_Chr4g0022911 49.254 134 65 2 5 136 17 149 1.90e-40 140
Msa1107440 MtrunA17_Chr4g0022901 50.000 136 63 2 5 135 17 152 1.99e-40 139
Msa1107440 MtrunA17_Chr2g0281071 61.386 101 39 0 5 105 17 117 3.86e-40 140
Msa1107440 MtrunA17_Chr4g0048511 61.386 101 39 0 5 105 17 117 5.33e-40 140
Msa1107440 MtrunA17_Chr7g0217741 48.120 133 69 0 5 137 16 148 6.24e-40 139
Msa1107440 MtrunA17_Chr2g0323411 60.396 101 40 0 5 105 16 116 2.05e-39 138
Msa1107440 MtrunA17_Chr8g0342541 53.125 128 56 1 6 133 17 140 2.33e-39 139
Msa1107440 MtrunA17_Chr1g0203411 59.406 101 41 0 5 105 16 116 2.51e-39 137
Msa1107440 MtrunA17_Chr4g0042671 51.145 131 57 1 5 128 16 146 2.96e-39 139
Msa1107440 MtrunA17_Chr1g0167691 58.416 101 42 0 5 105 16 116 2.99e-39 136
Msa1107440 MtrunA17_Chr7g0261281 60.000 100 40 0 6 105 17 116 3.38e-39 136
Msa1107440 MtrunA17_Chr3g0103281 58.491 106 44 0 6 111 17 122 1.55e-38 136
Msa1107440 MtrunA17_Chr8g0342521 59.000 100 41 0 6 105 17 116 2.71e-38 135
Msa1107440 MtrunA17_Chr4g0022881 44.898 147 79 1 5 149 16 162 3.84e-38 132
Msa1107440 MtrunA17_Chr2g0330041 59.000 100 41 0 6 105 17 116 7.64e-38 135
Msa1107440 MtrunA17_Chr4g0022891 58.763 97 40 0 5 101 16 112 8.46e-38 132
Msa1107440 MtrunA17_Chr8g0349261 42.675 157 88 2 6 161 18 173 8.55e-38 133
Msa1107440 MtrunA17_Chr2g0323351 50.847 118 53 1 5 122 16 128 8.93e-38 132
Msa1107440 MtrunA17_Chr1g0211161 58.000 100 42 0 6 105 18 117 1.07e-37 131
Msa1107440 MtrunA17_Chr7g0270891 35.443 237 127 7 6 229 17 240 1.50e-37 134
Msa1107440 MtrunA17_Chr7g0264641 32.661 248 125 4 6 211 17 264 1.62e-37 132
Msa1107440 MtrunA17_Chr5g0410961 55.046 109 49 0 5 113 16 124 1.65e-37 134
Msa1107440 MtrunA17_Chr1g0151941 38.384 198 105 3 5 185 16 213 1.69e-37 131
Msa1107440 MtrunA17_Chr1g0193801 60.000 100 40 0 6 105 17 116 1.70e-37 134
Msa1107440 MtrunA17_Chr6g0453471 56.604 106 46 0 6 111 17 122 1.70e-37 134
Msa1107440 MtrunA17_Chr6g0453211 61.053 95 37 0 6 100 17 111 2.72e-37 132
Msa1107440 MtrunA17_Chr3g0117091 58.000 100 42 0 6 105 17 116 3.63e-37 133
Msa1107440 MtrunA17_Chr6g0487491 44.311 167 77 4 5 162 16 175 5.16e-37 130
Msa1107440 MtrunA17_Chr1g0193371 58.000 100 42 0 6 105 17 116 5.86e-37 132
Msa1107440 MtrunA17_Chr3g0135311 60.784 102 39 1 5 105 16 117 8.46e-37 132
Msa1107440 MtrunA17_Chr4g0058631 38.421 190 107 4 6 195 17 196 9.18e-37 132
Msa1107440 MtrunA17_Chr2g0309911 48.507 134 55 1 6 139 16 135 9.77e-37 131
Msa1107440 MtrunA17_Chr1g0203441 52.727 110 51 1 6 114 18 127 1.09e-36 129
Msa1107440 MtrunA17_Chr8g0342481 60.396 101 39 1 6 105 17 117 1.11e-36 132
Msa1107440 MtrunA17_Chr5g0434901 57.407 108 43 1 31 135 3 110 1.14e-36 125
Msa1107440 MtrunA17_Chr4g0028311 57.547 106 44 1 5 109 16 121 1.23e-36 131
Msa1107440 MtrunA17_Chr7g0229101 55.556 108 44 1 32 135 3 110 2.01e-36 127
Msa1107440 MtrunA17_Chr5g0400821 59.804 102 40 1 5 105 16 117 3.71e-36 129
Msa1107440 MtrunA17_Chr7g0228231 36.161 224 108 5 5 227 18 207 5.59e-36 126
Msa1107440 MtrunA17_Chr6g0452271 56.604 106 46 0 6 111 17 122 6.10e-36 129
Msa1107440 MtrunA17_Chr7g0271241 50.000 138 64 1 6 138 17 154 7.29e-36 130
Msa1107440 MtrunA17_Chr1g0152011 58.824 102 41 1 5 105 16 117 7.72e-36 129
Msa1107440 MtrunA17_Chr2g0328771 51.786 112 54 0 6 117 25 136 1.87e-35 127
Msa1107440 MtrunA17_Chr7g0228891 57.009 107 46 0 5 111 16 122 2.09e-35 126
Msa1107440 MtrunA17_Chr4g0057031 56.075 107 47 0 5 111 16 122 2.30e-35 126
Msa1107440 MtrunA17_Chr4g0032401 57.000 100 43 0 6 105 22 121 3.04e-35 127
Msa1107440 MtrunA17_Chr3g0110351 56.075 107 47 0 5 111 16 122 4.91e-35 126
Msa1107440 MtrunA17_Chr2g0311221 57.292 96 41 0 5 100 18 113 6.12e-35 126
Msa1107440 MtrunA17_Chr8g0387421 55.000 100 45 0 6 105 17 116 7.95e-35 126
Msa1107440 MtrunA17_Chr7g0269831 46.763 139 65 1 6 135 17 155 1.01e-34 126
Msa1107440 MtrunA17_Chr5g0434571 56.075 107 47 0 5 111 52 158 1.49e-34 126
Msa1107440 MtrunA17_Chr5g0397231 58.065 93 39 0 6 98 17 109 2.52e-34 125
Msa1107440 MtrunA17_Chr1g0186061 55.556 99 44 0 6 104 25 123 3.62e-34 122
Msa1107440 MtrunA17_Chr4g0054391 54.310 116 52 1 5 119 16 131 3.90e-34 124
Msa1107440 MtrunA17_Chr3g0088461 55.000 100 45 0 6 105 27 126 4.41e-34 124
Msa1107440 MtrunA17_Chr2g0327351 58.947 95 38 1 5 98 16 110 7.28e-34 123
Msa1107440 MtrunA17_Chr5g0417821 54.000 100 46 0 6 105 12 111 1.01e-33 122
Msa1107440 MtrunA17_Chr1g0194301 50.450 111 55 0 6 116 38 148 1.12e-33 122
Msa1107440 MtrunA17_Chr1g0168661 51.327 113 51 1 6 114 26 138 1.48e-33 121
Msa1107440 MtrunA17_Chr7g0229131 57.447 94 38 1 32 125 3 94 1.50e-33 119
Msa1107440 MtrunA17_Chr6g0470971 53.535 99 46 0 6 104 19 117 3.86e-33 120
Msa1107440 MtrunA17_Chr7g0247131 49.123 114 57 1 31 144 8 120 5.45e-33 120
Msa1107440 MtrunA17_Chr1g0209661 52.336 107 51 0 5 111 31 137 1.21e-32 120
Msa1107440 MtrunA17_Chr4g0072751 58.947 95 38 1 5 98 16 110 3.12e-32 120
Msa1107440 MtrunA17_Chr1g0180391 50.467 107 53 0 5 111 23 129 3.51e-32 117
Msa1107440 MtrunA17_Chr3g0080861 42.857 133 59 2 2 129 33 153 3.74e-32 122
Msa1107440 MtrunA17_Chr3g0099131 51.000 100 49 0 5 104 45 144 4.23e-32 122
Msa1107440 MtrunA17_Chr6g0450101 50.476 105 52 0 5 109 18 122 1.46e-31 114
Msa1107440 MtrunA17_Chr1g0194291 50.000 112 56 0 5 116 25 136 3.35e-31 115
Msa1107440 MtrunA17_Chr8g0354661 49.515 103 52 0 5 107 41 143 3.37e-31 119
Msa1107440 MtrunA17_Chr2g0327821 48.485 99 51 0 6 104 11 109 7.90e-30 111
Msa1107440 MtrunA17_Chr1g0154031 48.000 100 52 0 5 104 80 179 1.01e-29 114
Msa1107440 MtrunA17_Chr4g0068921 50.450 111 55 0 6 116 29 139 1.15e-28 107
Msa1107440 MtrunA17_Chr1g0192411 49.000 100 51 0 5 104 16 115 1.48e-28 111
Msa1107440 MtrunA17_Chr2g0322521 49.515 103 52 0 5 107 33 135 1.73e-28 110
Msa1107440 MtrunA17_Chr4g0030881 44.860 107 52 1 5 104 11 117 2.04e-28 108
Msa1107440 MtrunA17_Chr2g0293911 46.667 120 64 0 5 124 28 147 2.11e-28 109
Msa1107440 MtrunA17_Chr8g0342531 49.000 100 46 1 6 100 17 116 4.35e-27 102
Msa1107440 MtrunA17_Chr5g0441131 38.849 139 76 2 6 135 14 152 6.72e-27 102
Msa1107440 MtrunA17_Chr5g0440781 45.000 100 54 1 5 103 16 115 9.19e-27 102
Msa1107440 MtrunA17_Chr2g0323321 50.526 95 40 1 5 99 15 102 2.31e-26 98.6
Msa1107440 MtrunA17_Chr5g0440761 44.762 105 56 2 5 108 16 119 2.72e-26 102
Msa1107440 MtrunA17_Chr5g0441141 45.833 96 51 1 5 99 16 111 3.34e-26 102
Msa1107440 MtrunA17_Chr4g0042611 58.904 73 30 0 5 77 16 88 1.30e-25 95.9
Msa1107440 MtrunA17_Chr5g0395221 57.534 73 31 0 5 77 16 88 1.56e-25 95.5
Msa1107440 MtrunA17_Chr8g0342461 59.459 74 29 1 6 78 17 90 3.33e-25 96.3
Msa1107440 MtrunA17_Chr8g0342511 59.155 71 29 0 6 76 17 87 3.98e-25 94.7
Msa1107440 MtrunA17_Chr5g0429661 49.474 95 45 2 6 99 125 217 1.70e-24 99.4
Msa1107440 MtrunA17_Chr8g0342471 58.108 74 30 1 6 78 17 90 1.95e-24 94.4
Msa1107440 MtrunA17_Chr2g0294811 56.579 76 33 0 6 81 17 92 3.04e-24 93.2
Msa1107440 MtrunA17_Chr4g0058991 48.421 95 46 2 6 99 212 304 1.01e-23 98.6
Msa1107440 MtrunA17_Chr4g0008551 42.105 114 62 3 6 117 41 152 1.55e-23 96.7
Msa1107440 MtrunA17_Chr8g0334881 46.316 95 50 1 5 98 14 108 5.85e-23 94.7
Msa1107440 MtrunA17_Chr3g0099141 51.282 78 38 0 6 83 45 122 7.08e-23 90.5
Msa1107440 MtrunA17_Chr4g0013361 41.176 119 65 2 5 122 14 128 9.61e-23 93.6
Msa1107440 MtrunA17_Chr6g0454921 40.541 111 57 2 6 112 18 123 2.80e-22 90.5
Msa1107440 MtrunA17_Chr4g0053431 40.367 109 64 1 6 114 8 115 4.33e-22 91.7
Msa1107440 MtrunA17_Chr7g0228531 31.754 211 120 7 6 213 223 412 6.96e-22 93.2
Msa1107440 MtrunA17_Chr3g0117511 42.735 117 61 3 6 121 186 297 8.01e-22 92.8
Msa1107440 MtrunA17_Chr6g0480581 43.434 99 53 2 6 103 7 103 1.59e-21 89.4
Msa1107440 MtrunA17_Chr3g0133601 42.424 99 56 1 6 104 40 137 2.55e-21 88.6
Msa1107440 MtrunA17_Chr5g0401731 37.931 116 69 2 5 119 17 130 4.38e-21 89.7
Msa1107440 MtrunA17_Chr5g0417621 36.170 141 87 2 6 145 137 275 1.61e-20 89.4
Msa1107440 MtrunA17_Chr7g0238631 33.333 171 94 4 6 158 116 284 2.12e-20 89.4
Msa1107440 MtrunA17_Chr4g0042501 43.000 100 54 2 6 104 108 205 2.99e-20 88.2
Msa1107440 MtrunA17_Chr3g0093811 50.617 81 40 0 31 111 12 92 3.69e-20 86.3
Msa1107440 MtrunA17_Chr7g0238651 41.584 101 57 1 6 104 10 110 6.28e-20 87.0
Msa1107440 MtrunA17_Chr6g0460671 35.417 144 82 4 6 148 102 235 1.99e-19 85.5
Msa1107440 MtrunA17_Chr3g0139671 34.286 140 88 3 5 143 87 223 2.06e-19 86.7
Msa1107440 MtrunA17_Chr1g0157731 33.588 131 84 2 6 135 94 222 2.20e-19 86.7
Msa1107440 MtrunA17_Chr1g0157731 31.373 102 68 2 6 106 42 142 3.24e-11 62.4
Msa1107440 MtrunA17_Chr5g0434871 79.070 43 9 0 63 105 2 44 2.36e-19 79.0
Msa1107440 MtrunA17_Chr3g0125801 45.000 100 52 2 6 104 19 116 5.04e-19 83.6
Msa1107440 MtrunA17_Chr6g0460661 43.158 95 51 2 6 99 19 111 5.97e-19 80.5
Msa1107440 MtrunA17_Chr1g0177901 28.638 213 141 6 13 225 4 205 1.55e-18 80.9
Msa1107440 MtrunA17_Chr5g0425591 44.304 79 43 1 5 82 13 91 2.87e-18 77.0
Msa1107440 MtrunA17_Chr7g0228401 39.450 109 61 4 14 121 290 394 3.02e-18 82.8
Msa1107440 MtrunA17_Chr5g0397841 36.290 124 76 2 5 126 112 234 5.88e-18 82.0
Msa1107440 MtrunA17_Chr7g0254261 43.000 100 54 2 6 104 92 189 1.07e-17 80.5
Msa1107440 MtrunA17_Chr5g0437321 37.624 101 54 2 5 101 21 116 2.51e-17 79.0
Msa1107440 MtrunA17_Chr7g0228481 37.903 124 64 4 6 125 223 337 3.56e-17 79.7
Msa1107440 MtrunA17_Chr5g0434891 45.946 74 36 1 66 135 1 74 4.73e-15 69.7
Msa1107440 MtrunA17_Chr8g0362231 33.051 118 77 2 4 120 23 139 6.06e-15 73.2
Msa1107440 MtrunA17_Chr7g0233061 38.947 95 53 3 6 99 183 273 2.19e-14 71.2
Msa1107440 MtrunA17_Chr5g0416341 30.719 153 96 5 4 149 27 176 7.47e-14 70.1
Msa1107440 MtrunA17_Chr6g0453751 43.023 86 40 3 6 82 25 110 7.62e-14 66.2
Msa1107440 MtrunA17_Chr2g0322831 58.974 39 16 0 59 97 34 72 8.37e-14 64.7
Msa1107440 MtrunA17_Chr4g0024181 54.545 44 20 0 59 102 28 71 4.60e-12 59.7
Msa1107440 MtrunA17_Chr1g0193901 43.636 55 31 0 3 57 14 68 7.92e-12 60.5
Msa1107440 MtrunA17_Chr1g0193891 43.636 55 31 0 3 57 14 68 7.92e-12 60.5
Msa1107440 MtrunA17_Chr1g0193871 43.636 55 31 0 3 57 14 68 7.92e-12 60.5
Msa1107440 MtrunA17_Chr1g0193881 43.636 55 31 0 3 57 14 68 7.92e-12 60.5
Msa1107440 MtrunA17_Chr7g0274481 36.667 90 52 3 2 88 7 94 1.26e-11 63.9
Msa1107440 MtrunA17_Chr2g0288361 47.727 44 23 0 59 102 29 72 3.70e-11 57.4
Msa1107440 MtrunA17_Chr7g0233151 36.111 72 43 1 54 125 1 69 4.48e-11 59.7
Msa1107440 MtrunA17_Chr3g0104491 33.333 90 50 3 43 128 2 85 5.77e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107440 AT1G66370.1 42.986 221 96 4 5 195 12 232 1.75e-55 177
Msa1107440 AT1G66380.1 80.000 100 20 0 5 104 12 111 1.28e-51 164
Msa1107440 AT1G56650.1 77.000 100 23 0 5 104 12 111 8.85e-50 163
Msa1107440 AT1G66390.1 79.000 100 21 0 5 104 12 111 1.76e-49 162
Msa1107440 AT1G22640.1 66.667 105 35 0 1 105 12 116 8.98e-47 155
Msa1107440 AT4G38620.1 53.020 149 60 3 5 144 16 163 8.80e-46 154
Msa1107440 AT5G14750.1 57.025 121 52 0 6 126 21 141 2.05e-45 150
Msa1107440 AT5G40330.1 41.361 191 90 1 6 196 17 185 7.63e-45 149
Msa1107440 AT4G09460.1 39.827 231 115 7 5 224 16 233 1.05e-44 149
Msa1107440 AT5G35550.1 54.264 129 54 1 5 128 18 146 4.56e-44 149
Msa1107440 AT5G16770.4 66.337 101 34 0 5 105 16 116 4.61e-44 150
Msa1107440 AT5G16770.3 66.337 101 34 0 5 105 16 116 4.61e-44 150
Msa1107440 AT5G16770.1 66.337 101 34 0 5 105 16 116 7.78e-44 150
Msa1107440 AT5G16770.2 66.337 101 34 0 5 105 16 116 7.78e-44 150
Msa1107440 AT3G27920.1 38.119 202 117 2 6 202 19 217 1.40e-43 146
Msa1107440 AT2G16720.1 47.590 166 70 4 1 166 12 160 1.47e-43 147
Msa1107440 AT3G13540.1 45.732 164 83 1 5 168 27 184 1.86e-43 147
Msa1107440 AT4G34990.1 48.214 168 65 4 5 150 16 183 2.24e-43 147
Msa1107440 AT5G49330.1 64.762 105 37 0 6 110 17 121 1.63e-42 147
Msa1107440 AT1G35515.1 60.952 105 41 0 1 105 12 116 2.25e-42 143
Msa1107440 AT3G02940.2 63.366 101 37 0 5 105 16 116 2.39e-42 145
Msa1107440 AT1G08810.1 49.655 145 67 2 5 149 16 154 3.24e-42 144
Msa1107440 AT2G47460.1 54.348 138 55 2 6 135 17 154 3.72e-42 147
Msa1107440 AT3G02940.1 63.366 101 37 0 5 105 16 116 4.55e-42 145
Msa1107440 AT3G02940.3 63.366 101 37 0 5 105 16 116 4.55e-42 145
Msa1107440 AT3G28910.1 61.947 113 40 1 2 111 10 122 5.36e-42 145
Msa1107440 AT3G23250.1 38.947 190 103 3 6 184 17 204 9.74e-42 143
Msa1107440 AT5G52600.1 61.765 102 39 0 6 107 17 118 1.47e-41 140
Msa1107440 AT5G62470.2 54.962 131 55 1 6 132 17 147 4.75e-41 143
Msa1107440 AT3G47600.1 58.559 111 46 0 5 115 16 126 8.63e-41 142
Msa1107440 AT1G74650.1 63.366 101 37 0 5 105 16 116 2.19e-40 141
Msa1107440 AT5G54230.1 62.376 101 38 0 5 105 16 116 2.44e-40 140
Msa1107440 AT4G21440.1 61.386 101 39 0 5 105 16 116 2.59e-40 141
Msa1107440 AT5G10280.1 58.416 101 42 0 5 105 16 116 3.02e-40 141
Msa1107440 AT5G65230.1 60.396 101 40 0 5 105 16 116 3.07e-40 140
Msa1107440 AT4G17785.1 61.386 101 39 0 5 105 17 117 5.95e-40 140
Msa1107440 AT4G17785.2 61.386 101 39 0 5 105 17 117 6.44e-40 140
Msa1107440 AT3G62610.1 62.745 102 38 0 6 107 17 118 1.23e-39 139
Msa1107440 AT5G62470.1 54.962 131 54 2 6 132 17 146 1.60e-39 139
Msa1107440 AT2G31180.1 43.103 174 83 3 5 178 16 173 1.94e-39 136
Msa1107440 AT4G28110.1 58.416 101 42 0 5 105 16 116 2.54e-39 137
Msa1107440 AT5G56110.1 60.377 106 42 0 6 111 17 122 4.54e-39 137
Msa1107440 AT4G05100.1 59.406 101 41 0 5 105 17 117 8.08e-39 137
Msa1107440 AT3G61250.1 55.660 106 47 0 6 111 17 122 8.18e-39 136
Msa1107440 AT1G57560.1 46.250 160 75 3 6 162 17 168 1.19e-38 136
Msa1107440 AT1G09540.1 44.966 149 82 0 6 154 17 165 1.36e-38 137
Msa1107440 AT1G06180.1 58.416 101 42 0 6 106 17 117 2.65e-38 133
Msa1107440 AT1G57560.2 61.000 100 39 0 6 105 17 116 2.90e-38 134
Msa1107440 AT5G15310.1 57.009 107 46 0 5 111 16 122 3.65e-38 135
Msa1107440 AT5G15310.2 57.009 107 46 0 5 111 16 122 4.58e-38 135
Msa1107440 AT1G34670.1 52.033 123 59 0 5 127 16 138 4.92e-38 135
Msa1107440 AT3G01140.2 60.000 100 40 0 6 105 17 116 8.55e-38 135
Msa1107440 AT5G15310.4 57.009 107 46 0 5 111 16 122 9.08e-38 132
Msa1107440 AT5G07700.1 59.406 101 41 0 5 105 16 116 9.25e-38 134
Msa1107440 AT5G07700.2 59.406 101 41 0 5 105 16 116 9.25e-38 134
Msa1107440 AT5G26660.1 60.000 100 40 0 6 105 17 116 1.53e-37 134
Msa1107440 AT5G60890.1 41.954 174 94 3 5 174 16 186 1.62e-37 133
Msa1107440 AT5G61420.2 58.416 101 42 0 5 105 16 116 1.70e-37 134
Msa1107440 AT4G12350.1 42.169 166 84 2 6 171 17 170 1.85e-37 132
Msa1107440 AT5G23000.1 60.784 102 39 1 5 105 16 117 1.86e-37 133
Msa1107440 AT3G01140.1 57.547 106 45 0 6 111 60 165 2.25e-37 134
Msa1107440 AT3G13890.2 58.000 100 42 0 6 105 17 116 3.05e-37 134
Msa1107440 AT5G07690.1 58.416 101 42 0 5 105 16 116 3.09e-37 133
Msa1107440 AT1G18570.1 59.406 101 41 0 5 105 17 117 3.56e-37 133
Msa1107440 AT4G01680.3 59.000 100 41 0 6 105 17 116 3.66e-37 130
Msa1107440 AT3G12720.1 56.000 100 44 0 6 105 27 126 4.65e-37 132
Msa1107440 AT4G01680.1 59.000 100 41 0 6 105 17 116 9.47e-37 132
Msa1107440 AT1G16490.1 37.949 195 102 4 5 194 18 198 2.32e-36 129
Msa1107440 AT1G74080.1 55.446 101 45 0 5 105 16 116 5.48e-36 130
Msa1107440 AT1G79180.1 56.436 101 44 0 5 105 18 118 6.26e-36 129
Msa1107440 AT1G63910.1 52.212 113 54 0 6 118 17 129 6.58e-36 130
Msa1107440 AT5G57620.1 55.263 114 50 1 5 117 16 129 6.69e-36 129
Msa1107440 AT1G56160.1 55.446 101 45 0 5 105 18 118 7.20e-36 129
Msa1107440 AT1G74430.1 59.000 100 41 0 6 105 17 116 7.45e-36 128
Msa1107440 AT5G14750.3 63.333 90 33 0 37 126 18 107 1.55e-35 124
Msa1107440 AT4G22680.1 41.667 156 80 1 5 160 16 160 1.80e-35 127
Msa1107440 AT3G49690.1 59.406 101 40 1 6 105 17 117 5.26e-35 127
Msa1107440 AT4G37780.1 55.882 102 44 1 5 105 16 117 6.78e-35 126
Msa1107440 AT5G65790.1 58.824 102 41 1 5 105 16 117 8.61e-35 127
Msa1107440 AT5G62320.1 52.586 116 48 1 5 113 17 132 8.96e-35 124
Msa1107440 AT3G12820.1 54.455 101 46 0 5 105 18 118 1.28e-34 124
Msa1107440 AT5G12870.1 52.427 103 49 0 6 108 23 125 1.86e-34 124
Msa1107440 AT4G01680.2 53.571 112 40 1 6 105 17 128 2.17e-34 126
Msa1107440 AT3G30210.1 43.709 151 75 2 5 154 31 172 2.65e-34 124
Msa1107440 AT3G13890.1 53.211 109 42 1 6 105 17 125 3.13e-34 126
Msa1107440 AT2G47190.1 52.336 107 51 0 5 111 24 130 3.37e-34 124
Msa1107440 AT1G66380.3 80.822 73 14 0 32 104 6 78 3.64e-34 118
Msa1107440 AT3G01530.1 40.385 156 88 1 6 156 30 185 3.68e-34 122
Msa1107440 AT3G24310.1 50.442 113 56 0 5 117 22 134 4.97e-34 123
Msa1107440 AT3G28470.1 41.243 177 94 3 6 179 17 186 5.19e-34 124
Msa1107440 AT4G13480.1 50.442 113 56 0 5 117 10 122 6.45e-34 122
Msa1107440 AT1G66230.1 54.206 107 49 0 5 111 16 122 6.81e-34 123
Msa1107440 AT1G25340.1 50.000 120 57 1 6 125 23 139 7.90e-34 123
Msa1107440 AT2G36890.1 57.009 107 45 1 5 110 16 122 2.55e-33 122
Msa1107440 AT2G36890.2 57.009 107 45 1 5 110 57 163 3.65e-33 122
Msa1107440 AT5G16600.1 40.936 171 87 3 5 164 16 183 4.38e-33 122
Msa1107440 AT5G35550.2 54.902 102 41 1 32 128 48 149 6.83e-33 120
Msa1107440 AT3G53200.1 53.922 102 47 0 6 107 14 115 8.00e-33 119
Msa1107440 AT5G14340.1 39.881 168 88 3 5 163 28 191 8.70e-33 120
Msa1107440 AT1G66380.2 71.429 77 22 0 5 81 12 88 9.29e-33 115
Msa1107440 AT3G08500.1 54.000 100 46 0 6 105 35 134 9.58e-33 121
Msa1107440 AT1G48000.1 45.455 143 75 1 6 145 37 179 1.06e-32 119
Msa1107440 AT3G27810.1 45.038 131 72 0 6 136 25 155 1.12e-32 118
Msa1107440 AT5G52260.1 58.586 99 41 0 6 104 17 115 1.20e-32 119
Msa1107440 AT4G25560.1 52.778 108 51 0 6 113 15 122 1.80e-32 119
Msa1107440 AT1G68320.1 49.587 121 58 1 5 125 23 140 2.72e-32 119
Msa1107440 AT1G18710.1 52.475 101 48 0 6 106 17 117 2.92e-32 118
Msa1107440 AT4G26930.1 49.533 107 49 1 2 103 15 121 8.98e-32 120
Msa1107440 AT5G59780.3 51.000 100 49 0 5 104 12 111 9.80e-32 116
Msa1107440 AT2G32460.1 48.544 103 53 0 5 107 22 124 1.08e-31 121
Msa1107440 AT2G32460.2 48.544 103 53 0 5 107 10 112 1.27e-31 120
Msa1107440 AT5G40350.1 49.573 117 58 1 6 121 22 138 1.51e-31 115
Msa1107440 AT3G48920.1 51.020 98 48 0 6 103 23 120 2.29e-31 116
Msa1107440 AT5G55020.1 49.541 109 50 1 2 105 22 130 2.35e-31 120
Msa1107440 AT5G06100.1 48.544 103 53 0 5 107 36 138 2.67e-31 119
Msa1107440 AT3G46130.1 50.000 100 50 0 5 104 13 112 3.49e-31 115
Msa1107440 AT5G06100.5 48.544 103 53 0 5 107 36 138 4.36e-31 119
Msa1107440 AT5G06100.2 48.544 103 53 0 5 107 36 138 4.36e-31 119
Msa1107440 AT5G06100.3 48.544 103 53 0 5 107 36 138 4.36e-31 119
Msa1107440 AT5G06100.4 48.544 103 53 0 5 107 36 138 4.36e-31 119
Msa1107440 AT2G26960.1 49.495 99 50 0 5 103 24 122 5.38e-31 118
Msa1107440 AT3G11440.2 47.573 103 54 0 5 107 45 147 7.12e-31 118
Msa1107440 AT3G11440.3 47.573 103 54 0 5 107 45 147 1.01e-30 119
Msa1107440 AT3G11440.4 47.573 103 54 0 5 107 45 147 1.01e-30 119
Msa1107440 AT3G11440.1 47.573 103 54 0 5 107 45 147 1.01e-30 119
Msa1107440 AT1G25340.2 48.333 120 54 2 6 125 23 134 1.31e-30 114
Msa1107440 AT1G25340.3 48.333 120 54 2 6 125 23 134 2.22e-30 114
Msa1107440 AT3G47600.2 63.415 82 30 0 34 115 39 120 3.40e-30 114
Msa1107440 AT5G49620.1 43.506 154 78 2 5 151 30 181 6.04e-30 113
Msa1107440 AT1G79180.2 44.030 134 42 2 5 105 18 151 1.58e-29 112
Msa1107440 AT5G26660.2 65.278 72 25 0 34 105 14 85 8.27e-29 110
Msa1107440 AT3G06490.1 50.893 112 55 0 5 116 23 134 1.13e-28 110
Msa1107440 AT2G26950.1 46.809 94 50 0 6 99 21 114 3.39e-28 110
Msa1107440 AT5G14750.4 60.000 80 32 0 47 126 1 80 6.11e-28 103
Msa1107440 AT5G14750.2 60.000 80 32 0 47 126 1 80 6.11e-28 103
Msa1107440 AT3G12820.2 62.319 69 26 0 37 105 2 70 5.46e-27 102
Msa1107440 AT1G22640.3 72.881 59 16 0 47 105 1 59 7.18e-27 102
Msa1107440 AT5G49620.2 39.881 168 78 3 5 151 30 195 2.80e-26 103
Msa1107440 AT3G27810.2 45.283 106 58 0 31 136 1 106 1.13e-25 99.0
Msa1107440 AT3G53200.2 56.962 79 34 0 29 107 4 82 2.14e-25 99.0
Msa1107440 AT3G23250.2 44.330 97 52 1 47 143 1 95 6.42e-25 98.6
Msa1107440 AT3G46130.3 56.944 72 31 0 33 104 9 80 3.34e-24 96.7
Msa1107440 AT3G46130.4 50.000 92 42 1 13 104 3 90 4.35e-24 96.3
Msa1107440 AT4G18770.1 48.421 95 46 2 6 99 220 312 5.43e-24 99.4
Msa1107440 AT5G59780.2 57.746 71 30 0 34 104 20 90 5.79e-24 95.5
Msa1107440 AT5G40350.2 51.685 89 42 1 34 121 5 93 1.04e-23 93.6
Msa1107440 AT1G71030.2 57.534 73 31 0 39 111 4 76 1.14e-23 94.0
Msa1107440 AT1G71030.1 57.534 73 31 0 39 111 18 90 1.63e-23 94.0
Msa1107440 AT5G40360.1 33.939 165 91 4 1 150 156 317 2.32e-23 96.7
Msa1107440 AT3G27785.1 48.421 95 46 2 6 99 192 284 7.32e-23 96.3
Msa1107440 AT5G58850.1 33.728 169 100 3 6 164 108 274 1.22e-22 95.5
Msa1107440 AT3G60460.1 45.263 95 51 1 5 98 15 109 1.96e-22 93.2
Msa1107440 AT1G17950.1 44.000 100 53 2 6 104 8 105 9.31e-22 90.5
Msa1107440 AT3G50060.1 37.500 128 70 2 5 123 8 134 1.99e-21 90.5
Msa1107440 AT1G69560.1 44.554 101 53 2 6 105 110 208 3.90e-21 90.1
Msa1107440 AT3G09230.1 35.878 131 66 2 6 136 58 170 4.60e-21 90.9
Msa1107440 AT1G69560.2 44.554 101 53 2 6 105 126 224 5.16e-21 90.1
Msa1107440 AT1G73410.1 47.000 100 50 2 6 104 9 106 5.29e-21 88.6
Msa1107440 AT2G25230.1 44.330 97 51 2 4 99 27 121 1.18e-20 87.4
Msa1107440 AT3G55730.1 45.545 101 50 3 6 104 59 156 1.31e-20 89.7
Msa1107440 AT1G26780.1 43.810 105 56 2 1 104 96 198 1.45e-20 87.8
Msa1107440 AT1G26780.2 43.810 105 56 2 1 104 96 198 1.57e-20 89.0
Msa1107440 AT1G73410.2 47.000 100 50 2 6 104 9 106 1.74e-20 86.3
Msa1107440 AT4G33450.1 44.000 100 53 2 6 104 22 119 2.30e-20 86.7
Msa1107440 AT2G37630.1 38.017 121 67 2 6 124 7 121 2.89e-20 88.2
Msa1107440 AT4G37260.1 41.584 101 56 2 5 104 15 113 2.90e-20 87.8
Msa1107440 AT5G11050.1 45.263 95 49 2 6 99 108 200 3.07e-20 88.6
Msa1107440 AT5G11510.3 38.462 104 61 2 5 107 83 184 3.79e-20 89.4
Msa1107440 AT5G11510.3 34.314 102 65 2 6 106 32 132 3.86e-12 65.9
Msa1107440 AT5G11510.1 38.462 104 61 2 5 107 83 184 3.79e-20 89.4
Msa1107440 AT5G11510.1 34.314 102 65 2 6 106 32 132 3.86e-12 65.9
Msa1107440 AT5G11510.4 38.462 104 61 2 5 107 83 184 3.79e-20 89.4
Msa1107440 AT5G11510.4 34.314 102 65 2 6 106 32 132 3.86e-12 65.9
Msa1107440 AT2G39880.1 43.564 101 54 2 5 104 52 150 4.72e-20 87.8
Msa1107440 AT4G32730.5 36.567 134 77 4 5 135 89 217 5.58e-20 88.6
Msa1107440 AT4G32730.4 36.567 134 77 4 5 135 89 217 5.58e-20 88.6
Msa1107440 AT4G32730.3 36.567 134 77 4 5 135 89 217 5.58e-20 88.6
Msa1107440 AT4G32730.2 36.567 134 77 4 5 135 89 217 5.58e-20 88.6
Msa1107440 AT4G32730.1 36.567 134 77 4 5 135 89 217 5.65e-20 88.6
Msa1107440 AT5G11510.2 38.462 104 61 2 5 107 83 184 6.08e-20 88.6
Msa1107440 AT5G11510.2 34.314 102 65 2 6 106 32 132 4.97e-12 65.5
Msa1107440 AT5G11510.5 38.462 104 61 2 5 107 83 184 6.76e-20 88.2
Msa1107440 AT5G11510.5 34.314 102 65 2 6 106 32 132 5.36e-12 65.1
Msa1107440 AT5G02320.1 42.157 102 56 2 5 105 129 228 9.04e-20 87.8
Msa1107440 AT5G02320.1 34.021 97 62 2 6 101 78 173 1.03e-11 64.3
Msa1107440 AT5G02320.2 42.157 102 56 2 5 105 129 228 9.04e-20 87.8
Msa1107440 AT5G02320.2 34.021 97 62 2 6 101 78 173 1.03e-11 64.3
Msa1107440 AT5G02320.3 42.157 102 56 2 5 105 69 168 1.21e-19 87.4
Msa1107440 AT5G02320.3 33.673 98 63 2 6 102 18 114 1.31e-11 63.9
Msa1107440 AT5G67300.1 35.878 131 78 2 5 135 8 132 1.74e-19 85.5
Msa1107440 AT2G23290.1 38.938 113 66 2 6 117 16 126 4.86e-19 84.3
Msa1107440 AT3G09370.2 41.584 101 56 2 5 104 137 235 9.37e-19 84.7
Msa1107440 AT3G09370.2 32.353 102 67 2 6 106 86 186 4.56e-11 62.4
Msa1107440 AT3G09370.1 41.584 101 56 2 5 104 132 230 1.13e-18 84.7
Msa1107440 AT3G09370.1 32.353 102 67 2 6 106 81 181 5.43e-11 62.0
Msa1107440 AT3G09370.3 41.584 101 56 2 5 104 145 243 1.34e-18 84.3
Msa1107440 AT3G09370.3 32.353 102 67 2 6 106 94 194 5.43e-11 62.0
Msa1107440 AT5G17800.1 38.938 113 62 3 6 116 96 203 2.53e-18 82.4
Msa1107440 AT5G40430.1 42.105 95 51 3 6 99 57 148 2.64e-18 81.3
Msa1107440 AT4G00540.2 38.739 111 62 3 5 111 105 213 8.91e-18 81.6
Msa1107440 AT4G00540.1 38.739 111 62 3 5 111 103 211 1.09e-17 81.6
Msa1107440 AT3G29020.2 38.136 118 62 3 6 122 70 177 1.52e-17 80.1
Msa1107440 AT3G29020.1 38.136 118 62 3 6 122 68 175 1.76e-17 78.6
Msa1107440 AT1G18960.1 38.318 107 63 2 6 112 13 116 1.98e-17 79.7
Msa1107440 AT5G39700.1 35.593 118 65 2 3 115 56 167 2.45e-14 69.3
Msa1107440 AT2G02820.1 37.963 108 63 3 4 110 31 135 2.70e-14 71.6
Msa1107440 AT2G02820.3 37.963 108 63 3 4 110 31 135 2.92e-14 71.2
Msa1107440 AT2G02820.2 37.963 108 63 3 4 110 31 135 3.87e-14 71.2
Msa1107440 AT1G14350.2 27.072 181 119 4 4 181 26 196 5.54e-14 70.9
Msa1107440 AT1G14350.1 27.072 181 119 4 4 181 26 196 5.54e-14 70.9
Msa1107440 AT3G28910.2 65.217 46 16 0 66 111 1 46 1.73e-13 68.2
Msa1107440 AT1G09770.1 33.621 116 72 3 2 114 7 120 4.62e-12 65.5
Msa1107440 AT1G74650.3 67.500 40 13 0 66 105 1 40 5.71e-12 63.9
Msa1107440 AT4G25560.2 57.778 45 19 0 60 104 3 47 4.41e-11 60.8
Msa1107440 AT4G01060.1 50.000 40 20 0 58 97 34 73 5.33e-11 57.4
Msa1107440 AT4G01060.2 50.000 40 20 0 58 97 31 70 5.43e-11 57.4
Msa1107440 AT4G01060.3 50.000 40 20 0 58 97 32 71 7.65e-11 57.0

Find 84 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGCCTTGCTGGCTAGTT+TGG 0.215872 7_3:+49007457 Msa1107440:five_prime_UTR
CCTCATCATCTCAAAGAAAT+TGG 0.220135 7_3:-49007319 None:intergenic
TCTCACAAGACCGACTTTAT+TGG 0.239183 7_3:-49010347 None:intergenic
CCAAAGGTGTTCAAATTATT+AGG 0.273156 7_3:+49009865 Msa1107440:CDS
ACATCATTTGCTGTCCTTCC+TGG 0.283170 7_3:-49009768 None:intergenic
GTCAAACTCCACAAATTATT+AGG 0.284949 7_3:+49008363 Msa1107440:CDS
GTAGTAGTAGCCAATGGAAT+TGG 0.291476 7_3:+49010135 Msa1107440:CDS
CCTAATAATTTGAACACCTT+TGG 0.291545 7_3:-49009865 None:intergenic
TTAGATATGGATCTGTATAA+TGG 0.303871 7_3:+49010170 Msa1107440:CDS
TTCAGGTGGTCCCTGATTGC+AGG 0.316661 7_3:+49009738 Msa1107440:intron
CTGGTAGCCTTCCTGCAATC+AGG 0.327586 7_3:-49009749 None:intergenic
AAATTTCCTCTCTTTATGTT+AGG 0.329738 7_3:-49008315 None:intergenic
TGTATATTACTCTGCCTTGC+TGG 0.335527 7_3:+49007448 Msa1107440:five_prime_UTR
GCTTCAAAATTCATAGTAAA+TGG 0.347918 7_3:-49007416 None:intergenic
ATTATCATTGCCTTCCCTAT+TGG 0.356240 7_3:-49010220 None:intergenic
GGTCAGTTGGTGATTCTACT+TGG 0.361520 7_3:-49009932 None:intergenic
TTTGTCATCTCATTTAGATT+AGG 0.371373 7_3:-49007223 None:intergenic
ACCTGTTGCCTAATAATTTG+TGG 0.373594 7_3:-49008371 None:intergenic
GGATAGGTTTGGCTTTGAAT+AGG 0.375086 7_3:+49007265 Msa1107440:five_prime_UTR
AAGAAATGCATACAACAATA+TGG 0.380233 7_3:+49007662 Msa1107440:CDS
ACAGATGCAGAAAGAGTTGT+AGG 0.382591 7_3:+49008268 Msa1107440:CDS
TATTGTCCCTTCTTGCCAAT+AGG 0.392653 7_3:+49010205 Msa1107440:three_prime_UTR
CGATTAAGCTACCATTTCCT+TGG 0.394976 7_3:-49010286 None:intergenic
GTGGCATAGGGTTCCACTAT+TGG 0.406540 7_3:+49007694 Msa1107440:CDS
TTCAATGTTATCCAAGGAAA+TGG 0.409490 7_3:+49010275 Msa1107440:three_prime_UTR
GGATTTGAAGCTATGGTAAG+TGG 0.415405 7_3:+49010104 Msa1107440:CDS
CAATGATAATCTCTAAATCT+TGG 0.416480 7_3:+49010233 Msa1107440:three_prime_UTR
ATTGTCCCTTCTTGCCAATA+GGG 0.421890 7_3:+49010206 Msa1107440:three_prime_UTR
TTGAAGAGTTTCATAAGAGA+TGG 0.432499 7_3:+49007601 Msa1107440:exon
TAGTAGTAGCCAATGGAATT+GGG 0.434958 7_3:+49010136 Msa1107440:CDS
TCCACAAATTATTAGGCAAC+AGG 0.435343 7_3:+49008370 Msa1107440:CDS
ACATACAGATGGGATAGGTT+TGG 0.452194 7_3:+49007254 Msa1107440:five_prime_UTR
GAAAGAGTTGTAGGCTAAGA+TGG 0.478279 7_3:+49008277 Msa1107440:CDS
GCCTTCCCTATTGGCAAGAA+GGG 0.478848 7_3:-49010211 None:intergenic
CCTTCTAATTGAAAATCCAT+TGG 0.479698 7_3:-49010083 None:intergenic
TGAAGAGTTTCATAAGAGAT+GGG 0.479761 7_3:+49007602 Msa1107440:exon
ATTAGAAGGATTTGAAGCTA+TGG 0.483623 7_3:+49010097 Msa1107440:CDS
CCAATTTCTTTGAGATGATG+AGG 0.486106 7_3:+49007319 Msa1107440:five_prime_UTR
TGCCTTCCCTATTGGCAAGA+AGG 0.487842 7_3:-49010212 None:intergenic
CTGATTGCAGGAAGGCTACC+AGG 0.490561 7_3:+49009750 Msa1107440:CDS
TGGTAGCCTTCCTGCAATCA+GGG 0.498009 7_3:-49009748 None:intergenic
AACAATATGGTGAAGGAAAG+TGG 0.501654 7_3:+49007675 Msa1107440:CDS
CTCTAGAAGCTGATCAAGAT+AGG 0.501983 7_3:+49009832 Msa1107440:CDS
GACCGACTTAGCCCTAAAAC+TGG 0.509527 7_3:+49010368 Msa1107440:three_prime_UTR
TCTCTTGTTGAACTAGAACT+TGG 0.510624 7_3:-49009953 None:intergenic
CATGATGATGTATTCATGCT+TGG 0.512087 7_3:+49010034 Msa1107440:CDS
GAACCAATGTTTCTTGCCTG+TGG 0.513007 7_3:-49009888 None:intergenic
ATGCTTGGACCAACAAGGTA+TGG 0.517260 7_3:+49010049 Msa1107440:CDS
ATAACAACATTTGATGCTGA+TGG 0.525249 7_3:+49009981 Msa1107440:CDS
ACTCACCAACCATACCTTGT+TGG 0.533165 7_3:-49010058 None:intergenic
TGTTCAAATTATTAGGCCAC+AGG 0.533893 7_3:+49009872 Msa1107440:CDS
CATAGGGTTCCACTATTGGC+TGG 0.537883 7_3:+49007698 Msa1107440:CDS
TTTAAATAAACCAATAAAGT+CGG 0.540827 7_3:+49010337 Msa1107440:three_prime_UTR
CACATATATATAAAAGATGC+AGG 0.544552 7_3:+49007542 Msa1107440:five_prime_UTR
GAGAGAGTAGTAGTAGCCAA+TGG 0.546466 7_3:+49010129 Msa1107440:CDS
ATGGTGAAGGAAAGTGGCAT+AGG 0.546971 7_3:+49007681 Msa1107440:CDS
TATGGTTGGTGAGTTTCCAA+TGG 0.550568 7_3:+49010067 Msa1107440:CDS
TCCCTTCTTGCCAATAGGGA+AGG 0.552047 7_3:+49010210 Msa1107440:three_prime_UTR
AGGCCACAGGCAAGAAACAT+TGG 0.557790 7_3:+49009885 Msa1107440:CDS
GCAAATCCTCCCAATTCCAT+TGG 0.561260 7_3:-49010145 None:intergenic
TCAAAGTTCAATGTTATCCA+AGG 0.564717 7_3:+49010269 Msa1107440:three_prime_UTR
TATATAAAAGATGCAGGTGT+GGG 0.570714 7_3:+49007548 Msa1107440:five_prime_UTR
TGAACTAGAACTTGGTCAGT+TGG 0.578769 7_3:-49009945 None:intergenic
GAGATGATGAGGACCACCAT+TGG 0.581200 7_3:+49007330 Msa1107440:five_prime_UTR
TGCATACAACAATATGGTGA+AGG 0.582605 7_3:+49007668 Msa1107440:CDS
ATATATAAAAGATGCAGGTG+TGG 0.586437 7_3:+49007547 Msa1107440:five_prime_UTR
AAATGACAGAAACATACAGA+TGG 0.589158 7_3:+49007243 Msa1107440:five_prime_UTR
TGGTGAAGGAAAGTGGCATA+GGG 0.591311 7_3:+49007682 Msa1107440:CDS
AAGAGATGGGTGGTGTTGCA+TGG 0.595869 7_3:+49007615 Msa1107440:exon
CAGAAACATACAGATGGGAT+AGG 0.598013 7_3:+49007249 Msa1107440:five_prime_UTR
TAGACATCATAAGTATCCAA+TGG 0.619370 7_3:-49007346 None:intergenic
ATGTGCCAAACTAGCCAGCA+AGG 0.620798 7_3:-49007462 None:intergenic
TTTGAAGCTATGGTAAGTGG+AGG 0.623004 7_3:+49010107 Msa1107440:CDS
TTGCAGGAAGGCTACCAGGA+AGG 0.630189 7_3:+49009754 Msa1107440:CDS
AATGACAGAAACATACAGAT+GGG 0.633108 7_3:+49007244 Msa1107440:five_prime_UTR
GATAGGTCACAATCATCCAA+AGG 0.642559 7_3:+49009849 Msa1107440:CDS
TATTCATGCTTGGACCAACA+AGG 0.644707 7_3:+49010044 Msa1107440:CDS
CTACGTCCTAACATAAAGAG+AGG 0.645909 7_3:+49008309 Msa1107440:CDS
GGTGGTCCCTGATTGCAGGA+AGG 0.651093 7_3:+49009742 Msa1107440:intron
CAGGTGTGGGTCGAATATGA+AGG 0.656099 7_3:+49007561 Msa1107440:five_prime_UTR
TTGGACCAACAAGGTATGGT+TGG 0.660368 7_3:+49010053 Msa1107440:CDS
AGAGTTTCATAAGAGATGGG+TGG 0.667150 7_3:+49007605 Msa1107440:exon
ACATCATAAGTATCCAATGG+TGG 0.679035 7_3:-49007343 None:intergenic
TAGTAGCCAATGGAATTGGG+AGG 0.680463 7_3:+49010139 Msa1107440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAAAAAATCAAGAAAA+AGG - chr7_3:49007746-49007765 None:intergenic 15.0%
!!! CAAAAAAAAGTATATAGTAT+AGG + chr7_3:49008584-49008603 Msa1107440:intron 15.0%
!! AATAAAACATTTGTATACAA+TGG + chr7_3:49008712-49008731 Msa1107440:intron 15.0%
!!! AAAAGAAAATTTTAACACAT+GGG - chr7_3:49009473-49009492 None:intergenic 15.0%
!!! CACATATAAAAATGATTTTT+CGG - chr7_3:49009557-49009576 None:intergenic 15.0%
!! TTTAAATAAACCAATAAAGT+CGG + chr7_3:49010337-49010356 Msa1107440:three_prime_UTR 15.0%
!!! TAACTAAGCACTTTTTTTTA+GGG - chr7_3:49009322-49009341 None:intergenic 20.0%
!!! TTAACTAAGCACTTTTTTTT+AGG - chr7_3:49009323-49009342 None:intergenic 20.0%
!! AAAACGATTATGGTAATATT+TGG - chr7_3:49009355-49009374 None:intergenic 20.0%
!! GTTAATAACTAAAACGATTA+TGG - chr7_3:49009365-49009384 None:intergenic 20.0%
!!! CAAAAGAAAATTTTAACACA+TGG - chr7_3:49009474-49009493 None:intergenic 20.0%
!!! CGAAAAATCATTTTTATATG+TGG + chr7_3:49009555-49009574 Msa1107440:intron 20.0%
!!! ATTTGTTACTAATTGCAAAA+AGG - chr7_3:49009689-49009708 None:intergenic 20.0%
!!! TTTTTGCAATTAGTAACAAA+TGG + chr7_3:49009688-49009707 Msa1107440:intron 20.0%
! CTATTTAAAAACATAGAGCT+TGG + chr7_3:49007366-49007385 Msa1107440:five_prime_UTR 25.0%
! GCTTCAAAATTCATAGTAAA+TGG - chr7_3:49007419-49007438 None:intergenic 25.0%
!! TCTTTTATATATATGTGTGG+TGG - chr7_3:49007539-49007558 None:intergenic 25.0%
!! GCATCTTTTATATATATGTG+TGG - chr7_3:49007542-49007561 None:intergenic 25.0%
! CACATATATATAAAAGATGC+AGG + chr7_3:49007542-49007561 Msa1107440:five_prime_UTR 25.0%
! AAGAAATGCATACAACAATA+TGG + chr7_3:49007662-49007681 Msa1107440:CDS 25.0%
! TCTATTTGTCTTCTCAAAAA+CGG + chr7_3:49007760-49007779 Msa1107440:intron 25.0%
!!! ATCTCATTATTTTGAGAGAT+TGG + chr7_3:49007892-49007911 Msa1107440:intron 25.0%
!!! TCTTCATTATTTTGAGAGAT+TGG + chr7_3:49008077-49008096 Msa1107440:intron 25.0%
! AATCAACTTAGTAAGTATGT+TGG - chr7_3:49008206-49008225 None:intergenic 25.0%
!! TTTCTTTTTCCATCAAACAT+TGG + chr7_3:49008229-49008248 Msa1107440:intron 25.0%
! AAATTTCCTCTCTTTATGTT+AGG - chr7_3:49008318-49008337 None:intergenic 25.0%
! AACACATTAGAAAATACCAA+AGG - chr7_3:49008419-49008438 None:intergenic 25.0%
! TCAATTTGAACCAATTGATT+TGG + chr7_3:49008622-49008641 Msa1107440:intron 25.0%
!!! AACCAATTGATTTGGTATTT+TGG + chr7_3:49008630-49008649 Msa1107440:intron 25.0%
! AAATTGAATTATTTAGGTCC+TGG - chr7_3:49008898-49008917 None:intergenic 25.0%
! GGGAGAAAATTGAATTATTT+AGG - chr7_3:49008904-49008923 None:intergenic 25.0%
!! GATCTAAAACTTGAGATAAT+GGG + chr7_3:49008953-49008972 Msa1107440:intron 25.0%
! ATTATTCGAGGAACTATATT+TGG - chr7_3:49009059-49009078 None:intergenic 25.0%
! CGTTTAGAAAATATTATTCG+AGG - chr7_3:49009071-49009090 None:intergenic 25.0%
! ATTACAAGATCAATTTGGAT+TGG - chr7_3:49009102-49009121 None:intergenic 25.0%
! GATCTATTACAAGATCAATT+TGG - chr7_3:49009107-49009126 None:intergenic 25.0%
! TTGTAATAGATCACTATTAG+TGG + chr7_3:49009115-49009134 Msa1107440:intron 25.0%
! TGTAATAGATCACTATTAGT+GGG + chr7_3:49009116-49009135 Msa1107440:intron 25.0%
! AGCAGAAAACAACATATATA+TGG - chr7_3:49009170-49009189 None:intergenic 25.0%
! ACAATAAAACTATAACAAGC+GGG - chr7_3:49009398-49009417 None:intergenic 25.0%
! CACAATAAAACTATAACAAG+CGG - chr7_3:49009399-49009418 None:intergenic 25.0%
! AAATTGTAGCAAATAGCTTA+GGG - chr7_3:49009715-49009734 None:intergenic 25.0%
! AAAATTGTAGCAAATAGCTT+AGG - chr7_3:49009716-49009735 None:intergenic 25.0%
!!! ATTTGCTACAATTTTTCTTC+AGG + chr7_3:49009721-49009740 Msa1107440:intron 25.0%
! CAAATGATGTGAAAAACTAT+TGG + chr7_3:49009781-49009800 Msa1107440:CDS 25.0%
! TTAGATATGGATCTGTATAA+TGG + chr7_3:49010170-49010189 Msa1107440:CDS 25.0%
! CAATGATAATCTCTAAATCT+TGG + chr7_3:49010233-49010252 Msa1107440:three_prime_UTR 25.0%
AAATGACAGAAACATACAGA+TGG + chr7_3:49007243-49007262 Msa1107440:five_prime_UTR 30.0%
AATGACAGAAACATACAGAT+GGG + chr7_3:49007244-49007263 Msa1107440:five_prime_UTR 30.0%
TAGACATCATAAGTATCCAA+TGG - chr7_3:49007349-49007368 None:intergenic 30.0%
ATATATAAAAGATGCAGGTG+TGG + chr7_3:49007547-49007566 Msa1107440:five_prime_UTR 30.0%
TATATAAAAGATGCAGGTGT+GGG + chr7_3:49007548-49007567 Msa1107440:five_prime_UTR 30.0%
TTGAAGAGTTTCATAAGAGA+TGG + chr7_3:49007601-49007620 Msa1107440:exon 30.0%
TGAAGAGTTTCATAAGAGAT+GGG + chr7_3:49007602-49007621 Msa1107440:exon 30.0%
!! ATAATGAGATCCGTTTTAAG+AGG - chr7_3:49007882-49007901 None:intergenic 30.0%
!! TCATTTTAATAGTGAACCCA+AGG - chr7_3:49007940-49007959 None:intergenic 30.0%
CGATCTCTAACAAATATGTA+TGG + chr7_3:49008005-49008024 Msa1107440:intron 30.0%
TCAATTTAATAGTGAACCCA+AGG - chr7_3:49008125-49008144 None:intergenic 30.0%
TTCAACAAACCAATGTTTGA+TGG - chr7_3:49008241-49008260 None:intergenic 30.0%
!! ATCAAACATTGGTTTGTTGA+AGG + chr7_3:49008240-49008259 Msa1107440:intron 30.0%
GTCAAACTCCACAAATTATT+AGG + chr7_3:49008363-49008382 Msa1107440:CDS 30.0%
! TGATCTTTTAGACTTTCCTT+TGG + chr7_3:49008400-49008419 Msa1107440:intron 30.0%
CACCAAAATACCAAATCAAT+TGG - chr7_3:49008635-49008654 None:intergenic 30.0%
!! TTTTTAGCAGGTAAGATGTT+TGG + chr7_3:49008664-49008683 Msa1107440:intron 30.0%
GAAATCAATGTAGGACTTAT+TGG - chr7_3:49008787-49008806 None:intergenic 30.0%
! ATTTTCTCCCATGAACTATT+TGG + chr7_3:49008914-49008933 Msa1107440:intron 30.0%
CATTGATCCAAATAGTTCAT+GGG - chr7_3:49008924-49008943 None:intergenic 30.0%
AACTATTTGGATCAATGGAT+TGG + chr7_3:49008927-49008946 Msa1107440:intron 30.0%
! CGATCTAAAACTTGAGATAA+TGG + chr7_3:49008952-49008971 Msa1107440:intron 30.0%
TCCAAAAAACGATTGATAAG+TGG + chr7_3:49008981-49009000 Msa1107440:intron 30.0%
!!! TCCACTTATCAATCGTTTTT+TGG - chr7_3:49008985-49009004 None:intergenic 30.0%
CCTAATAATTTGAACACCTT+TGG - chr7_3:49009868-49009887 None:intergenic 30.0%
!! CCAAAGGTGTTCAAATTATT+AGG + chr7_3:49009865-49009884 Msa1107440:CDS 30.0%
ATAACAACATTTGATGCTGA+TGG + chr7_3:49009981-49010000 Msa1107440:CDS 30.0%
CCTTCTAATTGAAAATCCAT+TGG - chr7_3:49010086-49010105 None:intergenic 30.0%
!! CCAATGGATTTTCAATTAGA+AGG + chr7_3:49010083-49010102 Msa1107440:CDS 30.0%
! ATTAGAAGGATTTGAAGCTA+TGG + chr7_3:49010097-49010116 Msa1107440:CDS 30.0%
TCAAAGTTCAATGTTATCCA+AGG + chr7_3:49010269-49010288 Msa1107440:three_prime_UTR 30.0%
TTCAATGTTATCCAAGGAAA+TGG + chr7_3:49010275-49010294 Msa1107440:three_prime_UTR 30.0%
CCTCATCATCTCAAAGAAAT+TGG - chr7_3:49007322-49007341 None:intergenic 35.0%
!! CCAATTTCTTTGAGATGATG+AGG + chr7_3:49007319-49007338 Msa1107440:five_prime_UTR 35.0%
ACATCATAAGTATCCAATGG+TGG - chr7_3:49007346-49007365 None:intergenic 35.0%
!!! CAGAGTTTTAGAAAGAGCAA+TGG + chr7_3:49007392-49007411 Msa1107440:five_prime_UTR 35.0%
CGAATATGAAGGTGAAAAAG+TGG + chr7_3:49007572-49007591 Msa1107440:five_prime_UTR 35.0%
TGCATACAACAATATGGTGA+AGG + chr7_3:49007668-49007687 Msa1107440:CDS 35.0%
AACAATATGGTGAAGGAAAG+TGG + chr7_3:49007675-49007694 Msa1107440:CDS 35.0%
! TAACTTTTACCAGCCAATAG+TGG - chr7_3:49007710-49007729 None:intergenic 35.0%
TCTTTGAACTATGTCATCTG+AGG + chr7_3:49007796-49007815 Msa1107440:intron 35.0%
CGATCTCTGACAAATATGTA+TGG + chr7_3:49007821-49007840 Msa1107440:intron 35.0%
CTCTTGAAGTATGTTATCTG+AGG + chr7_3:49007980-49007999 Msa1107440:intron 35.0%
TAATGAAGATCCGTCTTAAG+AGG - chr7_3:49008066-49008085 None:intergenic 35.0%
ATTGGTCCATACTCTTAACT+AGG + chr7_3:49008095-49008114 Msa1107440:intron 35.0%
! GGTTTTCCTAGTTAAGAGTA+TGG - chr7_3:49008104-49008123 None:intergenic 35.0%
ACTCTTAACTAGGAAAACCT+TGG + chr7_3:49008105-49008124 Msa1107440:intron 35.0%
CTCTTAACTAGGAAAACCTT+GGG + chr7_3:49008106-49008125 Msa1107440:intron 35.0%
ACTTGTTCAATCTTAGCACT+TGG + chr7_3:49008164-49008183 Msa1107440:intron 35.0%
! AAAGAGAGGAAATTTTGCTG+AGG + chr7_3:49008323-49008342 Msa1107440:CDS 35.0%
TCCACAAATTATTAGGCAAC+AGG + chr7_3:49008370-49008389 Msa1107440:CDS 35.0%
ACCTGTTGCCTAATAATTTG+TGG - chr7_3:49008374-49008393 None:intergenic 35.0%
! TGTTCTAAGTTCTAACAACC+AGG + chr7_3:49008435-49008454 Msa1107440:intron 35.0%
!! AGCCTTATGCAGTTTTTCAA+AGG + chr7_3:49008471-49008490 Msa1107440:intron 35.0%
! CACCTTTGAAAAACTGCATA+AGG - chr7_3:49008476-49008495 None:intergenic 35.0%
!!! GTGTGTTGTAGATTTTTAGC+AGG + chr7_3:49008652-49008671 Msa1107440:intron 35.0%
!! TCCTACATTGATTTCTTCTG+AGG + chr7_3:49008792-49008811 Msa1107440:intron 35.0%
ACCTCAGAAGAAATCAATGT+AGG - chr7_3:49008796-49008815 None:intergenic 35.0%
!! ATTTCTTCTGAGGTGTCAAT+TGG + chr7_3:49008802-49008821 Msa1107440:intron 35.0%
GTTATCCATTCTAGTCACTA+TGG - chr7_3:49008838-49008857 None:intergenic 35.0%
TTGAATTATTTAGGTCCTGG+AGG - chr7_3:49008895-49008914 None:intergenic 35.0%
CCATTGATCCAAATAGTTCA+TGG - chr7_3:49008925-49008944 None:intergenic 35.0%
CCATGAACTATTTGGATCAA+TGG + chr7_3:49008922-49008941 Msa1107440:intron 35.0%
GTTGAAGTCACTAAATTCTG+AGG + chr7_3:49009005-49009024 Msa1107440:intron 35.0%
! TGCTACAATTTTTCTTCAGG+TGG + chr7_3:49009724-49009743 Msa1107440:intron 35.0%
TGTTCAAATTATTAGGCCAC+AGG + chr7_3:49009872-49009891 Msa1107440:CDS 35.0%
TCTCTTGTTGAACTAGAACT+TGG - chr7_3:49009956-49009975 None:intergenic 35.0%
! CATGATGATGTATTCATGCT+TGG + chr7_3:49010034-49010053 Msa1107440:CDS 35.0%
TAGTAGTAGCCAATGGAATT+GGG + chr7_3:49010136-49010155 Msa1107440:CDS 35.0%
!! GGAGGATTTGCTTTTAGATA+TGG + chr7_3:49010157-49010176 Msa1107440:CDS 35.0%
ATTATCATTGCCTTCCCTAT+TGG - chr7_3:49010223-49010242 None:intergenic 35.0%
CAGAAACATACAGATGGGAT+AGG + chr7_3:49007249-49007268 Msa1107440:five_prime_UTR 40.0%
ACATACAGATGGGATAGGTT+TGG + chr7_3:49007254-49007273 Msa1107440:five_prime_UTR 40.0%
!! GGATAGGTTTGGCTTTGAAT+AGG + chr7_3:49007265-49007284 Msa1107440:five_prime_UTR 40.0%
TGTATATTACTCTGCCTTGC+TGG + chr7_3:49007448-49007467 Msa1107440:five_prime_UTR 40.0%
TGAAGGTGAAAAAGTGGTAG+TGG + chr7_3:49007578-49007597 Msa1107440:five_prime_UTR 40.0%
AGAGTTTCATAAGAGATGGG+TGG + chr7_3:49007605-49007624 Msa1107440:exon 40.0%
CAACTGTCGACCTCTTAAAA+CGG + chr7_3:49007869-49007888 Msa1107440:intron 40.0%
ATTGGTCCATACTCTTGACT+AGG + chr7_3:49007910-49007929 Msa1107440:intron 40.0%
! GGTTTTCCTAGTCAAGAGTA+TGG - chr7_3:49007919-49007938 None:intergenic 40.0%
ACTCTTGACTAGGAAAACCT+TGG + chr7_3:49007920-49007939 Msa1107440:intron 40.0%
CTCTTGACTAGGAAAACCTT+GGG + chr7_3:49007921-49007940 Msa1107440:intron 40.0%
ACAGATGCAGAAAGAGTTGT+AGG + chr7_3:49008268-49008287 Msa1107440:CDS 40.0%
GAAAGAGTTGTAGGCTAAGA+TGG + chr7_3:49008277-49008296 Msa1107440:CDS 40.0%
CTACGTCCTAACATAAAGAG+AGG + chr7_3:49008309-49008328 Msa1107440:CDS 40.0%
! AAATTTTGCTGAGGAGGAAG+TGG + chr7_3:49008332-49008351 Msa1107440:CDS 40.0%
! TAAGTTCTAACAACCAGGCA+TGG + chr7_3:49008440-49008459 Msa1107440:intron 40.0%
! AAGTTCTAACAACCAGGCAT+GGG + chr7_3:49008441-49008460 Msa1107440:intron 40.0%
TTGACAATTCACGCAAGGAT+TGG - chr7_3:49008760-49008779 None:intergenic 40.0%
AATCCTTGCGTGAATTGTCA+AGG + chr7_3:49008759-49008778 Msa1107440:intron 40.0%
!! TATAACAAGCGGGCTATGAA+GGG - chr7_3:49009388-49009407 None:intergenic 40.0%
! CTCTAGAAGCTGATCAAGAT+AGG + chr7_3:49009832-49009851 Msa1107440:CDS 40.0%
GATAGGTCACAATCATCCAA+AGG + chr7_3:49009849-49009868 Msa1107440:CDS 40.0%
TGAACTAGAACTTGGTCAGT+TGG - chr7_3:49009948-49009967 None:intergenic 40.0%
TATTCATGCTTGGACCAACA+AGG + chr7_3:49010044-49010063 Msa1107440:CDS 40.0%
!! TATGGTTGGTGAGTTTCCAA+TGG + chr7_3:49010067-49010086 Msa1107440:CDS 40.0%
! GGATTTGAAGCTATGGTAAG+TGG + chr7_3:49010104-49010123 Msa1107440:CDS 40.0%
! TTTGAAGCTATGGTAAGTGG+AGG + chr7_3:49010107-49010126 Msa1107440:CDS 40.0%
GTAGTAGTAGCCAATGGAAT+TGG + chr7_3:49010135-49010154 Msa1107440:CDS 40.0%
TATTGTCCCTTCTTGCCAAT+AGG + chr7_3:49010205-49010224 Msa1107440:three_prime_UTR 40.0%
ATTGTCCCTTCTTGCCAATA+GGG + chr7_3:49010206-49010225 Msa1107440:three_prime_UTR 40.0%
CGATTAAGCTACCATTTCCT+TGG - chr7_3:49010289-49010308 None:intergenic 40.0%
! TCTCACAAGACCGACTTTAT+TGG - chr7_3:49010350-49010369 None:intergenic 40.0%
ATGGTGAAGGAAAGTGGCAT+AGG + chr7_3:49007681-49007700 Msa1107440:CDS 45.0%
TGGTGAAGGAAAGTGGCATA+GGG + chr7_3:49007682-49007701 Msa1107440:CDS 45.0%
CAACTGTCGACCTCTTAAGA+CGG + chr7_3:49008053-49008072 Msa1107440:intron 45.0%
! GAGAGGAAATTTTGCTGAGG+AGG + chr7_3:49008326-49008345 Msa1107440:CDS 45.0%
!! TCACGCAAGGATTGGTCTTT+GGG - chr7_3:49008752-49008771 None:intergenic 45.0%
!! TTCACGCAAGGATTGGTCTT+TGG - chr7_3:49008753-49008772 None:intergenic 45.0%
GATCCTTGACAATTCACGCA+AGG - chr7_3:49008765-49008784 None:intergenic 45.0%
TGCGTCCATAGTGACTAGAA+TGG + chr7_3:49008830-49008849 Msa1107440:intron 45.0%
TTTAGGTCCTGGAGGATTGA+CGG - chr7_3:49008887-49008906 None:intergenic 45.0%
!! ATAACAAGCGGGCTATGAAG+GGG - chr7_3:49009387-49009406 None:intergenic 45.0%
!! CTATAACAAGCGGGCTATGA+AGG - chr7_3:49009389-49009408 None:intergenic 45.0%
!! ACATCATTTGCTGTCCTTCC+TGG - chr7_3:49009771-49009790 None:intergenic 45.0%
GAACCAATGTTTCTTGCCTG+TGG - chr7_3:49009891-49009910 None:intergenic 45.0%
!! GGTCAGTTGGTGATTCTACT+TGG - chr7_3:49009935-49009954 None:intergenic 45.0%
ATGCTTGGACCAACAAGGTA+TGG + chr7_3:49010049-49010068 Msa1107440:CDS 45.0%
TTGGACCAACAAGGTATGGT+TGG + chr7_3:49010053-49010072 Msa1107440:CDS 45.0%
ACTCACCAACCATACCTTGT+TGG - chr7_3:49010061-49010080 None:intergenic 45.0%
GAGAGAGTAGTAGTAGCCAA+TGG + chr7_3:49010129-49010148 Msa1107440:CDS 45.0%
TAGTAGCCAATGGAATTGGG+AGG + chr7_3:49010139-49010158 Msa1107440:CDS 45.0%
GCAAATCCTCCCAATTCCAT+TGG - chr7_3:49010148-49010167 None:intergenic 45.0%
!!! TTTAAAAAGTAAATTTTATT+AGG + chr7_3:49009582-49009601 Msa1107440:intron 5.0%
GAGATGATGAGGACCACCAT+TGG + chr7_3:49007330-49007349 Msa1107440:five_prime_UTR 50.0%
ATGTGCCAAACTAGCCAGCA+AGG - chr7_3:49007465-49007484 None:intergenic 50.0%
CAGGTGTGGGTCGAATATGA+AGG + chr7_3:49007561-49007580 Msa1107440:five_prime_UTR 50.0%
!! AAGAGATGGGTGGTGTTGCA+TGG + chr7_3:49007615-49007634 Msa1107440:exon 50.0%
GTGGCATAGGGTTCCACTAT+TGG + chr7_3:49007694-49007713 Msa1107440:CDS 50.0%
CATAGGGTTCCACTATTGGC+TGG + chr7_3:49007698-49007717 Msa1107440:CDS 50.0%
!! CACGCAAGGATTGGTCTTTG+GGG - chr7_3:49008751-49008770 None:intergenic 50.0%
TTAGGTCCTGGAGGATTGAC+GGG - chr7_3:49008886-49008905 None:intergenic 50.0%
TGGTAGCCTTCCTGCAATCA+GGG - chr7_3:49009751-49009770 None:intergenic 50.0%
AGGCCACAGGCAAGAAACAT+TGG + chr7_3:49009885-49009904 Msa1107440:CDS 50.0%
TCCCTTCTTGCCAATAGGGA+AGG + chr7_3:49010210-49010229 Msa1107440:three_prime_UTR 50.0%
GCCTTCCCTATTGGCAAGAA+GGG - chr7_3:49010214-49010233 None:intergenic 50.0%
TGCCTTCCCTATTGGCAAGA+AGG - chr7_3:49010215-49010234 None:intergenic 50.0%
! CTCTGCCTTGCTGGCTAGTT+TGG + chr7_3:49007457-49007476 Msa1107440:five_prime_UTR 55.0%
AGGCTATCATAGCCCATGCC+TGG - chr7_3:49008456-49008475 None:intergenic 55.0%
TAGGTCCTGGAGGATTGACG+GGG - chr7_3:49008885-49008904 None:intergenic 55.0%
TTCAGGTGGTCCCTGATTGC+AGG + chr7_3:49009738-49009757 Msa1107440:intron 55.0%
CTGGTAGCCTTCCTGCAATC+AGG - chr7_3:49009752-49009771 None:intergenic 55.0%
CTGATTGCAGGAAGGCTACC+AGG + chr7_3:49009750-49009769 Msa1107440:CDS 55.0%
TTGCAGGAAGGCTACCAGGA+AGG + chr7_3:49009754-49009773 Msa1107440:CDS 55.0%
GGTGGTCCCTGATTGCAGGA+AGG + chr7_3:49009742-49009761 Msa1107440:intron 60.0%
GTTCGCCCCGTCAATCCTCC+AGG + chr7_3:49008877-49008896 Msa1107440:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 49007224 49010389 49007224 ID=Msa1107440;Name=Msa1107440
chr7_3 mRNA 49007224 49010389 49007224 ID=Msa1107440-mRNA-1;Parent=Msa1107440;Name=Msa1107440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=396|1|1|1|1|1|3|187|229
chr7_3 exon 49007224 49007719 49007224 ID=Msa1107440-mRNA-1:exon:9980;Parent=Msa1107440-mRNA-1
chr7_3 exon 49008262 49008391 49008262 ID=Msa1107440-mRNA-1:exon:9981;Parent=Msa1107440-mRNA-1
chr7_3 exon 49009743 49010389 49009743 ID=Msa1107440-mRNA-1:exon:9982;Parent=Msa1107440-mRNA-1
chr7_3 five_prime_UTR 49007224 49007619 49007224 ID=Msa1107440-mRNA-1:five_prime_utr;Parent=Msa1107440-mRNA-1
chr7_3 CDS 49007620 49007719 49007620 ID=Msa1107440-mRNA-1:cds;Parent=Msa1107440-mRNA-1
chr7_3 CDS 49008262 49008391 49008262 ID=Msa1107440-mRNA-1:cds;Parent=Msa1107440-mRNA-1
chr7_3 CDS 49009743 49010202 49009743 ID=Msa1107440-mRNA-1:cds;Parent=Msa1107440-mRNA-1
chr7_3 three_prime_UTR 49010203 49010389 49010203 ID=Msa1107440-mRNA-1:three_prime_utr;Parent=Msa1107440-mRNA-1
Gene Sequence

>Msa1107440

ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACTTGCTTAAGAAATGCATACAACAATATGGTGAAGGAAAGTGGCATAGGGTTCCACTATTGGCTGGTCTAAACAGATGCAGAAAGAGTTGTAGGCTAAGATGGTTGAACTATCTACGTCCTAACATAAAGAGAGGAAATTTTGCTGAGGAGGAAGTGGAAATGATTGTCAAACTCCACAAATTATTAGGCAACAGGTGGTCCCTGATTGCAGGAAGGCTACCAGGAAGGACAGCAAATGATGTGAAAAACTATTGGAACTGTCATCTAAGCAAAAAACTAAATGCTCTAGAAGCTGATCAAGATAGGTCACAATCATCCAAAGGTGTTCAAATTATTAGGCCACAGGCAAGAAACATTGGTTCAAGCTCAGTGAAAAAAAGAAGCCAAGTAGAATCACCAACTGACCAAGTTCTAGTTCAACAAGAGAGTGACATAACAACATTTGATGCTGATGGAAAGAATCATATGCTTGAATCACAACAAGACATGATGATGTATTCATGCTTGGACCAACAAGGTATGGTTGGTGAGTTTCCAATGGATTTTCAATTAGAAGGATTTGAAGCTATGGTAAGTGGAGGAGAGAGTAGTAGTAGCCAATGGAATTGGGAGGATTTGCTTTTAGATATGGATCTGTATAATGGTTTTTCTTAG
Protein sequence

>Msa1107440

MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFAEEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNALEADQDRSQSSKGVQIIRPQARNIGSSSVKKRSQVESPTDQVLVQQESDITTFDADGKNHMLESQQDMMMYSCLDQQGMVGEFPMDFQLEGFEAMVSGGESSSSQWNWEDLLLDMDLYNGFS*