AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1150970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1150970 MtrunA17_Chr7g0240821 97.817 229 5 0 1 229 1 229 9.87e-171 469
Msa1150970 MtrunA17_Chr5g0434931 65.909 132 42 1 5 133 39 170 9.13e-57 182
Msa1150970 MtrunA17_Chr7g0228991 67.164 134 41 1 5 135 33 166 1.96e-56 181
Msa1150970 MtrunA17_Chr5g0434911 62.963 135 46 1 5 135 25 159 1.57e-55 178
Msa1150970 MtrunA17_Chr5g0434831 54.070 172 63 4 5 160 11 182 1.12e-53 171
Msa1150970 MtrunA17_Chr7g0220341 57.718 149 55 3 5 145 29 177 5.66e-53 172
Msa1150970 MtrunA17_Chr5g0434841 43.825 251 99 10 5 223 24 264 1.50e-52 172
Msa1150970 MtrunA17_Chr8g0360111 54.248 153 63 2 2 147 23 175 1.40e-49 162
Msa1150970 MtrunA17_Chr4g0055981 61.157 121 47 0 1 121 55 175 2.63e-49 161
Msa1150970 MtrunA17_Chr4g0070641 57.724 123 52 0 5 127 16 138 2.31e-47 154
Msa1150970 MtrunA17_Chr4g0070611 57.724 123 52 0 5 127 16 138 2.62e-47 158
Msa1150970 MtrunA17_Chr7g0275911 67.327 101 33 0 5 105 16 116 3.79e-46 154
Msa1150970 MtrunA17_Chr8g0346561 60.684 117 39 1 5 121 16 125 3.94e-45 152
Msa1150970 MtrunA17_Chr4g0037141 67.327 101 33 0 5 105 16 116 3.97e-45 152
Msa1150970 MtrunA17_Chr1g0187761 58.772 114 47 0 6 119 17 130 1.41e-44 149
Msa1150970 MtrunA17_Chr5g0435101 57.500 120 51 0 5 124 15 134 1.61e-44 148
Msa1150970 MtrunA17_Chr3g0121241 64.356 101 36 0 5 105 46 146 3.03e-44 150
Msa1150970 MtrunA17_Chr3g0131121 52.206 136 61 1 5 136 16 151 3.12e-43 147
Msa1150970 MtrunA17_Chr3g0115821 46.875 160 82 1 5 164 16 172 4.91e-43 148
Msa1150970 MtrunA17_Chr8g0343831 64.356 101 36 0 5 105 12 112 1.57e-42 144
Msa1150970 MtrunA17_Chr4g0039971 62.376 101 38 0 5 105 17 117 2.35e-42 146
Msa1150970 MtrunA17_Chr4g0022931 55.085 118 53 0 5 122 17 134 4.29e-42 144
Msa1150970 MtrunA17_Chr4g0068061 49.286 140 66 1 6 145 17 151 4.70e-42 145
Msa1150970 MtrunA17_Chr7g0217221 51.079 139 61 1 5 143 16 147 5.47e-42 143
Msa1150970 MtrunA17_Chr7g0274581 60.000 105 42 0 6 110 17 121 8.13e-42 141
Msa1150970 MtrunA17_Chr1g0167661 36.555 238 119 6 5 220 16 243 9.66e-42 142
Msa1150970 MtrunA17_Chr4g0044421 64.356 101 36 0 5 105 16 116 1.04e-41 140
Msa1150970 MtrunA17_Chr7g0254411 58.772 114 47 0 5 118 16 129 1.18e-41 144
Msa1150970 MtrunA17_Chr4g0022911 50.000 134 64 2 5 136 17 149 2.21e-41 142
Msa1150970 MtrunA17_Chr4g0060721 59.633 109 44 0 5 113 17 125 2.35e-41 143
Msa1150970 MtrunA17_Chr1g0194951 52.308 130 61 1 6 135 17 145 5.15e-41 143
Msa1150970 MtrunA17_Chr5g0395281 59.406 101 41 0 5 105 16 116 7.85e-41 141
Msa1150970 MtrunA17_Chr8g0385321 54.701 117 53 0 5 121 16 132 9.46e-41 141
Msa1150970 MtrunA17_Chr3g0092401 57.143 112 48 0 5 116 17 128 1.49e-40 140
Msa1150970 MtrunA17_Chr7g0217741 48.120 133 69 0 5 137 16 148 2.04e-40 140
Msa1150970 MtrunA17_Chr2g0281071 61.386 101 39 0 5 105 17 117 4.07e-40 140
Msa1150970 MtrunA17_Chr4g0022901 50.000 136 63 2 5 135 17 152 4.63e-40 138
Msa1150970 MtrunA17_Chr4g0048511 61.386 101 39 0 5 105 17 117 5.80e-40 140
Msa1150970 MtrunA17_Chr2g0323411 60.396 101 40 0 5 105 16 116 2.21e-39 138
Msa1150970 MtrunA17_Chr8g0342541 53.125 128 56 1 6 133 17 140 2.51e-39 138
Msa1150970 MtrunA17_Chr1g0203411 50.781 128 62 1 5 131 16 143 2.62e-39 137
Msa1150970 MtrunA17_Chr4g0042671 51.145 131 57 1 5 128 16 146 2.96e-39 139
Msa1150970 MtrunA17_Chr1g0167691 58.416 101 42 0 5 105 16 116 3.09e-39 135
Msa1150970 MtrunA17_Chr7g0261281 60.000 100 40 0 6 105 17 116 3.38e-39 136
Msa1150970 MtrunA17_Chr3g0103281 58.491 106 44 0 6 111 17 122 1.67e-38 135
Msa1150970 MtrunA17_Chr5g0410961 47.727 132 69 0 5 136 16 147 2.34e-38 136
Msa1150970 MtrunA17_Chr8g0342521 59.000 100 41 0 6 105 17 116 2.68e-38 135
Msa1150970 MtrunA17_Chr4g0022881 44.898 147 79 1 5 149 16 162 4.46e-38 132
Msa1150970 MtrunA17_Chr2g0323351 52.137 117 55 1 5 120 16 132 5.28e-38 132
Msa1150970 MtrunA17_Chr7g0270891 35.622 233 132 5 6 229 17 240 6.27e-38 135
Msa1150970 MtrunA17_Chr4g0022891 58.763 97 40 0 5 101 16 112 8.28e-38 132
Msa1150970 MtrunA17_Chr2g0330041 59.000 100 41 0 6 105 17 116 8.57e-38 135
Msa1150970 MtrunA17_Chr1g0151941 38.384 198 105 3 5 185 16 213 8.62e-38 132
Msa1150970 MtrunA17_Chr8g0349261 42.675 157 88 2 6 161 18 173 1.02e-37 133
Msa1150970 MtrunA17_Chr1g0211161 58.000 100 42 0 6 105 18 117 1.09e-37 131
Msa1150970 MtrunA17_Chr1g0193801 60.000 100 40 0 6 105 17 116 1.75e-37 134
Msa1150970 MtrunA17_Chr6g0453471 56.604 106 46 0 6 111 17 122 1.77e-37 134
Msa1150970 MtrunA17_Chr6g0453211 61.053 95 37 0 6 100 17 111 2.86e-37 132
Msa1150970 MtrunA17_Chr3g0117091 58.000 100 42 0 6 105 17 116 3.59e-37 133
Msa1150970 MtrunA17_Chr1g0193371 51.282 117 57 0 6 122 17 133 4.55e-37 133
Msa1150970 MtrunA17_Chr7g0228231 36.607 224 107 5 5 227 18 207 5.15e-37 129
Msa1150970 MtrunA17_Chr6g0487491 44.311 167 77 4 5 162 16 175 5.39e-37 130
Msa1150970 MtrunA17_Chr7g0271241 50.725 138 63 1 6 138 17 154 7.37e-37 132
Msa1150970 MtrunA17_Chr3g0135311 60.784 102 39 1 5 105 16 117 8.64e-37 132
Msa1150970 MtrunA17_Chr2g0309911 48.507 134 55 1 6 139 16 135 1.01e-36 130
Msa1150970 MtrunA17_Chr4g0058631 39.130 184 105 3 6 185 17 197 1.04e-36 132
Msa1150970 MtrunA17_Chr7g0264641 32.258 248 126 4 6 211 17 264 1.06e-36 130
Msa1150970 MtrunA17_Chr1g0203441 52.727 110 51 1 6 114 18 127 1.12e-36 129
Msa1150970 MtrunA17_Chr8g0342481 60.396 101 39 1 6 105 17 117 1.13e-36 132
Msa1150970 MtrunA17_Chr5g0434901 57.407 108 43 1 31 135 3 110 1.13e-36 125
Msa1150970 MtrunA17_Chr4g0028311 57.547 106 44 1 5 109 16 121 1.21e-36 131
Msa1150970 MtrunA17_Chr7g0229101 78.571 70 15 0 32 101 3 72 2.33e-36 127
Msa1150970 MtrunA17_Chr5g0400821 59.804 102 40 1 5 105 16 117 3.55e-36 129
Msa1150970 MtrunA17_Chr2g0328771 48.800 125 57 1 6 123 25 149 4.89e-36 129
Msa1150970 MtrunA17_Chr6g0452271 56.604 106 46 0 6 111 17 122 6.16e-36 129
Msa1150970 MtrunA17_Chr1g0152011 58.824 102 41 1 5 105 16 117 8.05e-36 129
Msa1150970 MtrunA17_Chr7g0228891 57.009 107 46 0 5 111 16 122 2.00e-35 126
Msa1150970 MtrunA17_Chr4g0057031 56.075 107 47 0 5 111 16 122 2.43e-35 126
Msa1150970 MtrunA17_Chr4g0032401 57.000 100 43 0 6 105 22 121 3.07e-35 127
Msa1150970 MtrunA17_Chr3g0110351 56.075 107 47 0 5 111 16 122 5.07e-35 126
Msa1150970 MtrunA17_Chr2g0311221 57.292 96 41 0 5 100 18 113 6.73e-35 126
Msa1150970 MtrunA17_Chr8g0387421 55.000 100 45 0 6 105 17 116 8.29e-35 126
Msa1150970 MtrunA17_Chr5g0434571 56.075 107 47 0 5 111 52 158 1.48e-34 126
Msa1150970 MtrunA17_Chr7g0269831 59.000 100 41 0 6 105 17 116 2.48e-34 125
Msa1150970 MtrunA17_Chr5g0397231 58.065 93 39 0 6 98 17 109 2.80e-34 125
Msa1150970 MtrunA17_Chr1g0186061 55.556 99 44 0 6 104 25 123 3.78e-34 122
Msa1150970 MtrunA17_Chr4g0054391 54.310 116 52 1 5 119 16 131 4.15e-34 123
Msa1150970 MtrunA17_Chr3g0088461 55.000 100 45 0 6 105 27 126 4.74e-34 124
Msa1150970 MtrunA17_Chr2g0327351 58.947 95 38 1 5 98 16 110 8.35e-34 123
Msa1150970 MtrunA17_Chr5g0417821 54.000 100 46 0 6 105 12 111 1.04e-33 122
Msa1150970 MtrunA17_Chr1g0194301 50.450 111 55 0 6 116 38 148 1.12e-33 122
Msa1150970 MtrunA17_Chr1g0168661 51.327 113 51 1 6 114 26 138 1.48e-33 121
Msa1150970 MtrunA17_Chr7g0229131 57.447 94 38 1 32 125 3 94 1.94e-33 118
Msa1150970 MtrunA17_Chr6g0470971 53.535 99 46 0 6 104 19 117 3.94e-33 120
Msa1150970 MtrunA17_Chr7g0247131 49.123 114 57 1 31 144 8 120 9.67e-33 119
Msa1150970 MtrunA17_Chr1g0209661 53.846 104 48 0 5 108 31 134 1.30e-32 120
Msa1150970 MtrunA17_Chr4g0072751 58.947 95 38 1 5 98 16 110 3.26e-32 120
Msa1150970 MtrunA17_Chr1g0180391 50.467 107 53 0 5 111 23 129 4.16e-32 117
Msa1150970 MtrunA17_Chr3g0099131 51.000 100 49 0 5 104 45 144 4.49e-32 122
Msa1150970 MtrunA17_Chr3g0080861 47.748 111 53 1 2 107 33 143 7.62e-32 121
Msa1150970 MtrunA17_Chr6g0450101 50.476 105 52 0 5 109 18 122 1.51e-31 114
Msa1150970 MtrunA17_Chr1g0194291 50.000 112 56 0 5 116 25 136 3.08e-31 115
Msa1150970 MtrunA17_Chr8g0354661 49.515 103 52 0 5 107 41 143 3.68e-31 119
Msa1150970 MtrunA17_Chr2g0327821 48.485 99 51 0 6 104 11 109 7.98e-30 111
Msa1150970 MtrunA17_Chr1g0154031 48.000 100 52 0 5 104 80 179 1.03e-29 114
Msa1150970 MtrunA17_Chr4g0068921 50.450 111 55 0 6 116 29 139 1.24e-28 107
Msa1150970 MtrunA17_Chr2g0322521 49.515 103 52 0 5 107 33 135 1.71e-28 110
Msa1150970 MtrunA17_Chr1g0192411 49.000 100 51 0 5 104 16 115 1.80e-28 110
Msa1150970 MtrunA17_Chr4g0030881 44.860 107 52 1 5 104 11 117 2.08e-28 108
Msa1150970 MtrunA17_Chr2g0293911 50.000 112 56 0 5 116 28 139 2.37e-28 109
Msa1150970 MtrunA17_Chr8g0342531 49.000 100 46 1 6 100 17 116 4.35e-27 102
Msa1150970 MtrunA17_Chr5g0440781 45.000 100 54 1 5 103 16 115 1.00e-26 101
Msa1150970 MtrunA17_Chr2g0323321 50.526 95 40 1 5 99 15 102 2.44e-26 98.6
Msa1150970 MtrunA17_Chr5g0440761 44.762 105 56 2 5 108 16 119 3.11e-26 102
Msa1150970 MtrunA17_Chr5g0441141 45.833 96 51 1 5 99 16 111 3.55e-26 102
Msa1150970 MtrunA17_Chr5g0441131 38.129 139 77 2 6 135 14 152 9.28e-26 99.0
Msa1150970 MtrunA17_Chr4g0042611 58.904 73 30 0 5 77 16 88 1.36e-25 95.9
Msa1150970 MtrunA17_Chr5g0395221 57.534 73 31 0 5 77 16 88 1.70e-25 95.5
Msa1150970 MtrunA17_Chr8g0342461 59.459 74 29 1 6 78 17 90 3.40e-25 96.3
Msa1150970 MtrunA17_Chr8g0342511 59.155 71 29 0 6 76 17 87 3.58e-25 95.1
Msa1150970 MtrunA17_Chr5g0429661 49.474 95 45 2 6 99 125 217 1.90e-24 99.4
Msa1150970 MtrunA17_Chr8g0342471 58.108 74 30 1 6 78 17 90 1.91e-24 94.4
Msa1150970 MtrunA17_Chr2g0294811 56.579 76 33 0 6 81 17 92 3.04e-24 93.2
Msa1150970 MtrunA17_Chr4g0058991 48.421 95 46 2 6 99 212 304 1.12e-23 98.2
Msa1150970 MtrunA17_Chr4g0008551 42.105 114 62 3 6 117 41 152 1.56e-23 96.7
Msa1150970 MtrunA17_Chr8g0334881 46.316 95 50 1 5 98 14 108 6.10e-23 94.7
Msa1150970 MtrunA17_Chr3g0099141 51.282 78 38 0 6 83 45 122 7.47e-23 90.5
Msa1150970 MtrunA17_Chr4g0013361 41.176 119 65 2 5 122 14 128 1.11e-22 93.6
Msa1150970 MtrunA17_Chr6g0454921 40.541 111 57 2 6 112 18 123 3.07e-22 90.5
Msa1150970 MtrunA17_Chr4g0053431 40.367 109 64 1 6 114 8 115 4.42e-22 91.7
Msa1150970 MtrunA17_Chr3g0117511 47.368 95 47 2 6 99 186 278 1.09e-21 92.4
Msa1150970 MtrunA17_Chr6g0480581 43.434 99 53 2 6 103 7 103 1.64e-21 89.4
Msa1150970 MtrunA17_Chr3g0133601 42.424 99 56 1 6 104 40 137 2.32e-21 88.6
Msa1150970 MtrunA17_Chr5g0401731 37.931 116 69 2 5 119 17 130 4.65e-21 89.7
Msa1150970 MtrunA17_Chr7g0228531 32.512 203 113 7 6 205 223 404 4.82e-21 90.5
Msa1150970 MtrunA17_Chr5g0417621 36.170 141 87 2 6 145 137 275 1.03e-20 89.7
Msa1150970 MtrunA17_Chr7g0238631 33.333 171 94 4 6 158 116 284 2.23e-20 89.4
Msa1150970 MtrunA17_Chr4g0042501 43.000 100 54 2 6 104 108 205 3.23e-20 88.2
Msa1150970 MtrunA17_Chr3g0093811 50.617 81 40 0 31 111 12 92 3.77e-20 86.3
Msa1150970 MtrunA17_Chr7g0238651 41.584 101 57 1 6 104 10 110 6.22e-20 87.0
Msa1150970 MtrunA17_Chr6g0460671 35.417 144 82 4 6 148 102 235 1.60e-19 85.9
Msa1150970 MtrunA17_Chr3g0139671 34.286 140 88 3 5 143 87 223 1.64e-19 87.0
Msa1150970 MtrunA17_Chr5g0434871 79.070 43 9 0 63 105 2 44 2.36e-19 79.0
Msa1150970 MtrunA17_Chr3g0125801 45.000 100 52 2 6 104 19 116 4.99e-19 83.6
Msa1150970 MtrunA17_Chr1g0157731 33.588 131 84 2 6 135 94 222 5.42e-19 85.5
Msa1150970 MtrunA17_Chr6g0460661 43.158 95 51 2 6 99 19 111 6.43e-19 80.5
Msa1150970 MtrunA17_Chr1g0177901 30.000 200 128 7 13 211 4 192 9.83e-19 81.3
Msa1150970 MtrunA17_Chr5g0425591 44.304 79 43 1 5 82 13 91 3.02e-18 76.6
Msa1150970 MtrunA17_Chr7g0228401 39.806 103 58 3 14 115 290 389 3.51e-18 82.8
Msa1150970 MtrunA17_Chr7g0254261 43.000 100 54 2 6 104 92 189 1.05e-17 80.9
Msa1150970 MtrunA17_Chr5g0397841 36.290 124 76 2 5 126 112 234 1.06e-17 81.3
Msa1150970 MtrunA17_Chr5g0437321 37.624 101 54 2 5 101 21 116 2.29e-17 79.0
Msa1150970 MtrunA17_Chr7g0228481 37.097 124 65 4 6 125 223 337 3.92e-16 76.6
Msa1150970 MtrunA17_Chr5g0434891 45.946 74 36 1 66 135 1 74 1.69e-15 70.9
Msa1150970 MtrunA17_Chr7g0233061 32.283 127 79 4 6 131 183 303 2.08e-14 71.2
Msa1150970 MtrunA17_Chr8g0362231 33.043 115 75 2 4 117 23 136 2.32e-14 71.6
Msa1150970 MtrunA17_Chr5g0416341 30.719 153 96 5 4 149 27 176 6.36e-14 70.1
Msa1150970 MtrunA17_Chr6g0453751 43.023 86 40 3 6 82 25 110 8.45e-14 66.2
Msa1150970 MtrunA17_Chr2g0322831 58.974 39 16 0 59 97 34 72 8.55e-14 64.7
Msa1150970 MtrunA17_Chr4g0024181 54.545 44 20 0 59 102 28 71 5.00e-12 59.7
Msa1150970 MtrunA17_Chr1g0193901 43.636 55 31 0 3 57 14 68 8.00e-12 60.5
Msa1150970 MtrunA17_Chr1g0193891 43.636 55 31 0 3 57 14 68 8.00e-12 60.5
Msa1150970 MtrunA17_Chr1g0193871 43.636 55 31 0 3 57 14 68 8.00e-12 60.5
Msa1150970 MtrunA17_Chr1g0193881 43.636 55 31 0 3 57 14 68 8.00e-12 60.5
Msa1150970 MtrunA17_Chr7g0274481 36.667 90 52 3 2 88 7 94 1.17e-11 63.9
Msa1150970 MtrunA17_Chr2g0288361 47.727 44 23 0 59 102 29 72 3.82e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1150970 AT1G66370.1 43.439 221 95 4 5 195 12 232 5.08e-56 179
Msa1150970 AT1G66380.1 80.000 100 20 0 5 104 12 111 1.21e-51 164
Msa1150970 AT1G56650.1 77.000 100 23 0 5 104 12 111 9.24e-50 163
Msa1150970 AT1G66390.1 79.000 100 21 0 5 104 12 111 1.80e-49 162
Msa1150970 AT1G22640.1 66.667 105 35 0 1 105 12 116 9.58e-47 155
Msa1150970 AT5G14750.1 60.345 116 44 1 6 121 21 134 2.86e-46 152
Msa1150970 AT4G38620.1 48.538 171 75 4 5 163 16 185 5.97e-46 154
Msa1150970 AT5G40330.1 41.361 191 90 1 6 196 17 185 9.17e-45 149
Msa1150970 AT4G09460.1 48.344 151 70 1 5 147 16 166 1.85e-44 149
Msa1150970 AT5G35550.1 54.264 129 54 1 5 128 18 146 2.75e-44 149
Msa1150970 AT5G16770.4 66.337 101 34 0 5 105 16 116 4.82e-44 150
Msa1150970 AT5G16770.3 66.337 101 34 0 5 105 16 116 4.82e-44 150
Msa1150970 AT5G16770.1 66.337 101 34 0 5 105 16 116 8.21e-44 150
Msa1150970 AT5G16770.2 66.337 101 34 0 5 105 16 116 8.21e-44 150
Msa1150970 AT2G16720.1 62.857 105 39 0 1 105 12 116 1.66e-43 147
Msa1150970 AT3G27920.1 38.119 202 117 2 6 202 19 217 2.15e-43 146
Msa1150970 AT4G34990.1 48.214 168 65 4 5 150 16 183 2.29e-43 147
Msa1150970 AT3G13540.1 45.122 164 85 1 5 163 27 190 4.95e-43 145
Msa1150970 AT1G08810.1 49.655 145 67 2 5 149 16 154 1.69e-42 145
Msa1150970 AT5G49330.1 64.762 105 37 0 6 110 17 121 1.74e-42 147
Msa1150970 AT1G35515.1 60.952 105 41 0 1 105 12 116 2.30e-42 143
Msa1150970 AT3G02940.2 63.366 101 37 0 5 105 16 116 2.53e-42 145
Msa1150970 AT2G47460.1 65.347 101 35 0 6 106 17 117 4.79e-42 146
Msa1150970 AT3G02940.1 63.366 101 37 0 5 105 16 116 4.95e-42 145
Msa1150970 AT3G02940.3 63.366 101 37 0 5 105 16 116 4.95e-42 145
Msa1150970 AT3G28910.1 61.947 113 40 1 2 111 10 122 5.30e-42 145
Msa1150970 AT3G23250.1 47.101 138 71 1 6 143 17 152 1.31e-41 143
Msa1150970 AT5G52600.1 61.765 102 39 0 6 107 17 118 1.52e-41 140
Msa1150970 AT5G62470.2 54.962 131 55 1 6 132 17 147 4.27e-41 144
Msa1150970 AT3G47600.1 58.559 111 46 0 5 115 16 126 9.00e-41 142
Msa1150970 AT1G74650.1 63.366 101 37 0 5 105 16 116 2.41e-40 141
Msa1150970 AT5G65230.1 55.172 116 52 0 5 120 16 131 2.45e-40 140
Msa1150970 AT5G54230.1 62.376 101 38 0 5 105 16 116 2.52e-40 140
Msa1150970 AT4G21440.1 61.386 101 39 0 5 105 16 116 2.70e-40 141
Msa1150970 AT2G31180.1 44.000 175 80 4 5 178 16 173 2.90e-40 139
Msa1150970 AT5G10280.1 58.416 101 42 0 5 105 16 116 2.96e-40 141
Msa1150970 AT4G17785.2 61.386 101 39 0 5 105 17 117 6.11e-40 140
Msa1150970 AT4G17785.1 61.386 101 39 0 5 105 17 117 6.20e-40 140
Msa1150970 AT3G62610.1 62.745 102 38 0 6 107 17 118 1.15e-39 139
Msa1150970 AT5G62470.1 54.962 131 54 2 6 132 17 146 1.52e-39 139
Msa1150970 AT4G28110.1 58.416 101 42 0 5 105 16 116 3.01e-39 137
Msa1150970 AT1G09540.1 44.966 149 82 0 6 154 17 165 3.63e-39 139
Msa1150970 AT5G56110.1 60.377 106 42 0 6 111 17 122 4.40e-39 137
Msa1150970 AT1G34670.1 52.846 123 58 0 5 127 16 138 6.04e-39 138
Msa1150970 AT4G05100.1 59.406 101 41 0 5 105 17 117 8.43e-39 137
Msa1150970 AT3G61250.1 55.660 106 47 0 6 111 17 122 8.81e-39 136
Msa1150970 AT1G57560.1 46.203 158 78 2 6 162 17 168 2.13e-38 135
Msa1150970 AT1G06180.1 58.416 101 42 0 6 106 17 117 2.71e-38 133
Msa1150970 AT1G57560.2 61.000 100 39 0 6 105 17 116 3.10e-38 134
Msa1150970 AT5G15310.1 57.009 107 46 0 5 111 16 122 3.77e-38 135
Msa1150970 AT5G15310.2 57.009 107 46 0 5 111 16 122 4.93e-38 134
Msa1150970 AT3G01140.2 60.000 100 40 0 6 105 17 116 9.60e-38 134
Msa1150970 AT5G15310.4 57.009 107 46 0 5 111 16 122 9.68e-38 132
Msa1150970 AT5G07700.1 59.406 101 41 0 5 105 16 116 9.96e-38 134
Msa1150970 AT5G07700.2 59.406 101 41 0 5 105 16 116 9.96e-38 134
Msa1150970 AT4G12350.1 42.169 166 84 2 6 171 17 170 1.53e-37 132
Msa1150970 AT5G26660.1 45.638 149 78 2 6 151 17 165 1.53e-37 134
Msa1150970 AT5G23000.1 60.784 102 39 1 5 105 16 117 2.01e-37 133
Msa1150970 AT5G61420.2 58.416 101 42 0 5 105 16 116 2.03e-37 134
Msa1150970 AT3G01140.1 57.547 106 45 0 6 111 60 165 2.32e-37 134
Msa1150970 AT5G07690.1 58.416 101 42 0 5 105 16 116 3.43e-37 133
Msa1150970 AT3G13890.2 58.000 100 42 0 6 105 17 116 3.46e-37 133
Msa1150970 AT4G01680.3 59.000 100 41 0 6 105 17 116 3.54e-37 130
Msa1150970 AT1G18570.1 59.406 101 41 0 5 105 17 117 3.84e-37 133
Msa1150970 AT3G12720.1 56.000 100 44 0 6 105 27 126 5.17e-37 132
Msa1150970 AT5G60890.1 58.416 101 42 0 5 105 16 116 5.80e-37 131
Msa1150970 AT4G01680.1 59.000 100 41 0 6 105 17 116 1.02e-36 132
Msa1150970 AT5G14750.3 68.235 85 25 1 37 121 18 100 1.72e-36 126
Msa1150970 AT5G57620.1 54.701 117 52 1 5 120 16 132 2.40e-36 130
Msa1150970 AT1G79180.1 38.674 181 100 2 5 183 18 189 2.48e-36 130
Msa1150970 AT1G16490.1 51.282 117 54 1 5 118 18 134 3.75e-36 129
Msa1150970 AT1G74080.1 55.446 101 45 0 5 105 16 116 5.71e-36 130
Msa1150970 AT1G63910.1 52.212 113 54 0 6 118 17 129 7.23e-36 130
Msa1150970 AT1G56160.1 55.446 101 45 0 5 105 18 118 7.36e-36 128
Msa1150970 AT1G74430.1 59.000 100 41 0 6 105 17 116 7.69e-36 128
Msa1150970 AT3G49690.1 59.406 101 40 1 6 105 17 117 5.48e-35 126
Msa1150970 AT4G37780.1 55.882 102 44 1 5 105 16 117 6.10e-35 126
Msa1150970 AT5G65790.1 58.824 102 41 1 5 105 16 117 8.35e-35 127
Msa1150970 AT5G62320.1 52.586 116 48 1 5 113 17 132 9.97e-35 124
Msa1150970 AT3G12820.1 54.455 101 46 0 5 105 18 118 1.26e-34 124
Msa1150970 AT4G22680.1 41.667 156 80 1 5 160 16 160 1.41e-34 124
Msa1150970 AT3G30210.1 44.000 150 74 2 6 154 32 172 1.63e-34 124
Msa1150970 AT5G12870.1 52.427 103 49 0 6 108 23 125 1.84e-34 124
Msa1150970 AT4G01680.2 53.571 112 40 1 6 105 17 128 2.34e-34 125
Msa1150970 AT3G01530.1 40.385 156 88 1 6 156 30 185 3.16e-34 122
Msa1150970 AT3G13890.1 53.211 109 42 1 6 105 17 125 3.33e-34 125
Msa1150970 AT2G47190.1 52.336 107 51 0 5 111 24 130 3.34e-34 124
Msa1150970 AT1G66380.3 80.822 73 14 0 32 104 6 78 3.68e-34 118
Msa1150970 AT3G28470.1 41.243 177 94 3 6 179 17 186 4.82e-34 124
Msa1150970 AT3G24310.1 50.442 113 56 0 5 117 22 134 5.41e-34 123
Msa1150970 AT1G66230.1 54.206 107 49 0 5 111 16 122 6.32e-34 123
Msa1150970 AT4G13480.1 50.442 113 56 0 5 117 10 122 6.94e-34 122
Msa1150970 AT1G25340.1 50.000 120 57 1 6 125 23 139 1.25e-33 122
Msa1150970 AT2G36890.1 57.009 107 45 1 5 110 16 122 2.63e-33 122
Msa1150970 AT2G36890.2 57.009 107 45 1 5 110 57 163 3.77e-33 122
Msa1150970 AT5G35550.2 54.902 102 41 1 32 128 48 149 5.13e-33 120
Msa1150970 AT1G48000.1 45.455 143 75 1 6 145 37 179 8.11e-33 119
Msa1150970 AT3G53200.1 53.922 102 47 0 6 107 14 115 8.53e-33 119
Msa1150970 AT3G27810.1 45.038 131 72 0 6 136 25 155 8.83e-33 119
Msa1150970 AT1G66380.2 71.429 77 22 0 5 81 12 88 9.39e-33 115
Msa1150970 AT5G16600.1 53.271 107 50 0 5 111 16 122 9.54e-33 121
Msa1150970 AT3G08500.1 54.000 100 46 0 6 105 35 134 1.02e-32 121
Msa1150970 AT5G14340.1 50.427 117 58 0 5 121 28 144 1.05e-32 120
Msa1150970 AT5G52260.1 58.586 99 41 0 6 104 17 115 1.10e-32 119
Msa1150970 AT4G25560.1 52.778 108 51 0 6 113 15 122 1.80e-32 119
Msa1150970 AT1G18710.1 52.475 101 48 0 6 106 17 117 3.01e-32 118
Msa1150970 AT1G68320.1 51.786 112 52 1 5 114 23 134 3.81e-32 119
Msa1150970 AT4G26930.1 49.533 107 49 1 2 103 15 121 9.56e-32 119
Msa1150970 AT2G32460.1 48.544 103 53 0 5 107 22 124 1.09e-31 121
Msa1150970 AT5G59780.3 51.000 100 49 0 5 104 12 111 1.11e-31 116
Msa1150970 AT2G32460.2 48.544 103 53 0 5 107 10 112 1.38e-31 120
Msa1150970 AT5G40350.1 40.223 179 95 5 6 180 22 192 1.73e-31 115
Msa1150970 AT3G48920.1 51.020 98 48 0 6 103 23 120 2.27e-31 116
Msa1150970 AT5G55020.1 49.541 109 50 1 2 105 22 130 2.65e-31 120
Msa1150970 AT5G06100.1 48.544 103 53 0 5 107 36 138 2.67e-31 119
Msa1150970 AT3G46130.1 50.000 100 50 0 5 104 13 112 3.68e-31 115
Msa1150970 AT5G06100.5 48.544 103 53 0 5 107 36 138 4.91e-31 119
Msa1150970 AT5G06100.2 48.544 103 53 0 5 107 36 138 4.91e-31 119
Msa1150970 AT5G06100.3 48.544 103 53 0 5 107 36 138 4.91e-31 119
Msa1150970 AT5G06100.4 48.544 103 53 0 5 107 36 138 4.91e-31 119
Msa1150970 AT2G26960.1 49.495 99 50 0 5 103 24 122 6.21e-31 118
Msa1150970 AT3G11440.2 47.573 103 54 0 5 107 45 147 8.37e-31 118
Msa1150970 AT3G11440.3 47.573 103 54 0 5 107 45 147 1.19e-30 119
Msa1150970 AT3G11440.4 47.573 103 54 0 5 107 45 147 1.19e-30 119
Msa1150970 AT3G11440.1 47.573 103 54 0 5 107 45 147 1.19e-30 119
Msa1150970 AT1G25340.2 48.333 120 54 2 6 125 23 134 2.04e-30 114
Msa1150970 AT3G47600.2 63.415 82 30 0 34 115 39 120 3.77e-30 114
Msa1150970 AT1G25340.3 48.333 120 54 2 6 125 23 134 3.88e-30 114
Msa1150970 AT5G49620.1 45.161 155 74 3 5 151 30 181 4.23e-30 114
Msa1150970 AT1G79180.2 42.384 151 52 3 5 120 18 168 6.04e-30 114
Msa1150970 AT3G06490.1 51.282 117 56 1 5 121 23 138 6.80e-29 110
Msa1150970 AT5G14750.4 65.333 75 24 1 47 121 1 73 7.39e-29 106
Msa1150970 AT5G14750.2 65.333 75 24 1 47 121 1 73 7.39e-29 106
Msa1150970 AT5G26660.2 65.278 72 25 0 34 105 14 85 8.53e-29 110
Msa1150970 AT2G26950.1 46.809 94 50 0 6 99 21 114 3.67e-28 110
Msa1150970 AT3G12820.2 62.319 69 26 0 37 105 2 70 5.34e-27 102
Msa1150970 AT1G22640.3 72.881 59 16 0 47 105 1 59 7.73e-27 102
Msa1150970 AT5G49620.2 41.420 169 74 4 5 151 30 195 2.06e-26 104
Msa1150970 AT3G27810.2 45.283 106 58 0 31 136 1 106 8.94e-26 99.4
Msa1150970 AT3G53200.2 56.962 79 34 0 29 107 4 82 2.14e-25 99.0
Msa1150970 AT3G23250.2 44.330 97 52 1 47 143 1 95 6.76e-25 98.2
Msa1150970 AT3G46130.3 56.944 72 31 0 33 104 9 80 3.67e-24 96.3
Msa1150970 AT3G46130.4 50.000 92 42 1 13 104 3 90 4.58e-24 96.3
Msa1150970 AT5G59780.2 57.746 71 30 0 34 104 20 90 6.23e-24 95.5
Msa1150970 AT4G18770.1 48.421 95 46 2 6 99 220 312 6.76e-24 99.0
Msa1150970 AT1G71030.2 57.534 73 31 0 39 111 4 76 1.19e-23 94.0
Msa1150970 AT5G40350.2 46.316 95 49 1 34 128 5 97 1.30e-23 93.6
Msa1150970 AT1G71030.1 57.534 73 31 0 39 111 18 90 1.77e-23 94.0
Msa1150970 AT5G40360.1 33.939 165 91 4 1 150 156 317 2.02e-23 97.1
Msa1150970 AT3G27785.1 48.421 95 46 2 6 99 192 284 8.49e-23 95.9
Msa1150970 AT3G60460.1 45.263 95 51 1 5 98 15 109 1.96e-22 93.2
Msa1150970 AT5G58850.1 37.762 143 77 3 6 138 108 248 3.02e-22 94.4
Msa1150970 AT1G17950.1 44.000 100 53 2 6 104 8 105 9.50e-22 90.5
Msa1150970 AT3G50060.1 37.500 128 70 2 5 123 8 134 1.85e-21 90.9
Msa1150970 AT1G69560.1 44.554 101 53 2 6 105 110 208 4.02e-21 90.1
Msa1150970 AT3G09230.1 35.878 131 66 2 6 136 58 170 4.30e-21 90.9
Msa1150970 AT1G69560.2 44.554 101 53 2 6 105 126 224 5.16e-21 90.1
Msa1150970 AT1G73410.1 47.000 100 50 2 6 104 9 106 5.69e-21 88.2
Msa1150970 AT5G11050.1 39.062 128 70 4 6 129 108 231 8.09e-21 90.5
Msa1150970 AT3G55730.1 45.545 101 50 3 6 104 59 156 1.21e-20 89.7
Msa1150970 AT2G25230.1 44.330 97 51 2 4 99 27 121 1.25e-20 87.0
Msa1150970 AT1G26780.1 43.810 105 56 2 1 104 96 198 1.44e-20 87.8
Msa1150970 AT1G73410.2 47.000 100 50 2 6 104 9 106 1.69e-20 86.3
Msa1150970 AT1G26780.2 43.810 105 56 2 1 104 96 198 1.81e-20 89.0
Msa1150970 AT2G37630.1 38.017 121 67 2 6 124 7 121 2.59e-20 88.6
Msa1150970 AT4G33450.1 44.000 100 53 2 6 104 22 119 2.63e-20 86.7
Msa1150970 AT4G37260.1 41.584 101 56 2 5 104 15 113 3.05e-20 87.8
Msa1150970 AT5G11510.3 38.462 104 61 2 5 107 83 184 4.05e-20 89.0
Msa1150970 AT5G11510.3 34.314 102 65 2 6 106 32 132 4.40e-12 65.5
Msa1150970 AT5G11510.1 38.462 104 61 2 5 107 83 184 4.05e-20 89.0
Msa1150970 AT5G11510.1 34.314 102 65 2 6 106 32 132 4.40e-12 65.5
Msa1150970 AT5G11510.4 38.462 104 61 2 5 107 83 184 4.05e-20 89.0
Msa1150970 AT5G11510.4 34.314 102 65 2 6 106 32 132 4.40e-12 65.5
Msa1150970 AT2G39880.1 44.000 100 53 2 6 104 53 150 4.62e-20 87.8
Msa1150970 AT4G32730.1 36.567 134 77 4 5 135 89 217 5.23e-20 88.6
Msa1150970 AT4G32730.5 36.567 134 77 4 5 135 89 217 5.85e-20 88.6
Msa1150970 AT4G32730.4 36.567 134 77 4 5 135 89 217 5.85e-20 88.6
Msa1150970 AT4G32730.3 36.567 134 77 4 5 135 89 217 5.85e-20 88.6
Msa1150970 AT4G32730.2 36.567 134 77 4 5 135 89 217 5.85e-20 88.6
Msa1150970 AT5G11510.2 38.462 104 61 2 5 107 83 184 6.62e-20 88.6
Msa1150970 AT5G11510.2 34.314 102 65 2 6 106 32 132 5.77e-12 65.1
Msa1150970 AT5G11510.5 38.462 104 61 2 5 107 83 184 7.94e-20 88.2
Msa1150970 AT5G11510.5 34.314 102 65 2 6 106 32 132 6.12e-12 65.1
Msa1150970 AT5G02320.1 42.157 102 56 2 5 105 129 228 9.85e-20 87.8
Msa1150970 AT5G02320.1 34.021 97 62 2 6 101 78 173 1.26e-11 63.9
Msa1150970 AT5G02320.2 42.157 102 56 2 5 105 129 228 9.85e-20 87.8
Msa1150970 AT5G02320.2 34.021 97 62 2 6 101 78 173 1.26e-11 63.9
Msa1150970 AT5G02320.3 42.157 102 56 2 5 105 69 168 1.23e-19 87.4
Msa1150970 AT5G02320.3 33.673 98 63 2 6 102 18 114 1.50e-11 63.5
Msa1150970 AT5G67300.1 42.000 100 57 1 5 104 8 106 1.98e-19 85.1
Msa1150970 AT2G23290.1 38.938 113 66 2 6 117 16 126 4.91e-19 84.3
Msa1150970 AT3G09370.2 41.584 101 56 2 5 104 137 235 1.02e-18 84.7
Msa1150970 AT3G09370.2 32.353 102 67 2 6 106 86 186 5.15e-11 62.0
Msa1150970 AT3G09370.1 41.584 101 56 2 5 104 132 230 1.26e-18 84.3
Msa1150970 AT3G09370.1 32.353 102 67 2 6 106 81 181 6.49e-11 62.0
Msa1150970 AT3G09370.3 41.584 101 56 2 5 104 145 243 1.46e-18 84.3
Msa1150970 AT3G09370.3 32.353 102 67 2 6 106 94 194 6.14e-11 62.0
Msa1150970 AT5G17800.1 36.800 125 68 4 6 124 96 215 2.61e-18 82.4
Msa1150970 AT5G40430.1 42.105 95 51 3 6 99 57 148 2.78e-18 81.3
Msa1150970 AT4G00540.2 38.739 111 62 3 5 111 105 213 9.09e-18 81.6
Msa1150970 AT4G00540.1 38.739 111 62 3 5 111 103 211 1.30e-17 81.3
Msa1150970 AT3G29020.2 38.136 118 62 3 6 122 70 177 1.74e-17 80.1
Msa1150970 AT1G18960.1 38.318 107 63 2 6 112 13 116 1.96e-17 79.7
Msa1150970 AT3G29020.1 38.136 118 62 3 6 122 68 175 2.01e-17 78.6
Msa1150970 AT5G39700.1 35.593 118 65 2 3 115 56 167 2.40e-14 69.3
Msa1150970 AT2G02820.1 37.963 108 63 3 4 110 31 135 2.78e-14 71.6
Msa1150970 AT2G02820.3 37.963 108 63 3 4 110 31 135 2.92e-14 71.2
Msa1150970 AT2G02820.2 37.963 108 63 3 4 110 31 135 3.87e-14 71.2
Msa1150970 AT1G14350.2 27.072 181 119 4 4 181 26 196 4.46e-14 71.2
Msa1150970 AT1G14350.1 27.072 181 119 4 4 181 26 196 4.46e-14 71.2
Msa1150970 AT3G28910.2 65.217 46 16 0 66 111 1 46 1.75e-13 68.2
Msa1150970 AT1G09770.1 33.621 116 72 3 2 114 7 120 4.67e-12 65.5
Msa1150970 AT1G74650.3 67.500 40 13 0 66 105 1 40 5.38e-12 63.9
Msa1150970 AT4G25560.2 57.778 45 19 0 60 104 3 47 4.59e-11 60.8
Msa1150970 AT4G01060.1 50.000 40 20 0 58 97 34 73 5.73e-11 57.4
Msa1150970 AT4G01060.2 50.000 40 20 0 58 97 31 70 5.77e-11 57.4
Msa1150970 AT4G01060.3 50.000 40 20 0 58 97 32 71 7.73e-11 57.0

Find 87 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAATAATTTGAACATCTT+TGG 0.181787 7_4:-34866428 None:intergenic
CTCTGCCTTGCTGGCTAGTT+TGG 0.215872 7_4:+34864024 Msa1150970:five_prime_UTR
CCTCATCATCTCAAAGAAAT+TGG 0.220135 7_4:-34863886 None:intergenic
TCTCACAAGACCGACTTTAT+TGG 0.239183 7_4:-34866908 None:intergenic
TTAGATATGGATTTGTATAA+TGG 0.262692 7_4:+34866733 Msa1150970:CDS
ACATCATTTGCTGTCCTTCC+TGG 0.283170 7_4:-34866331 None:intergenic
CCAAAGATGTTCAAATTATT+AGG 0.283789 7_4:+34866428 Msa1150970:CDS
GTCAAACTCCACAAATTATT+AGG 0.284949 7_4:+34864929 Msa1150970:CDS
GGAGGATTTGCTCTTAGATA+TGG 0.316126 7_4:+34866720 Msa1150970:CDS
TTCAGGTGGTCCCTGATTGC+AGG 0.316661 7_4:+34866301 Msa1150970:intron
CTGGTAGCCTTCCTGCAATC+AGG 0.327586 7_4:-34866312 None:intergenic
AAATTTCCTCTCTTTATGTT+AGG 0.329738 7_4:-34864881 None:intergenic
TGTATATTACTCTGCCTTGC+TGG 0.335527 7_4:+34864015 Msa1150970:five_prime_UTR
GCTTCAAAATTCATAGTAAA+TGG 0.347918 7_4:-34863983 None:intergenic
GGTCAGTTGGTGATTCTACT+TGG 0.361520 7_4:-34866495 None:intergenic
ACTATCATTGCCTTCCCTAT+TGG 0.362733 7_4:-34866783 None:intergenic
TTTGTCATCTCATTTAGATT+AGG 0.371373 7_4:-34863790 None:intergenic
ACCTGTTGCCTAATAATTTG+TGG 0.373594 7_4:-34864937 None:intergenic
GGATAGGTTTGGCTTTGAAT+AGG 0.375086 7_4:+34863832 Msa1150970:five_prime_UTR
GTAGTAGTAGCCAATGGAAT+TGG 0.379589 7_4:+34866698 Msa1150970:CDS
AAGAAATGCATACAACAATA+TGG 0.380233 7_4:+34864229 Msa1150970:CDS
ACAGATGCAGAAAGAGTTGT+AGG 0.382591 7_4:+34864834 Msa1150970:CDS
TATTGTCCTTTCTTGCCAAT+AGG 0.383469 7_4:+34866768 Msa1150970:three_prime_UTR
GCCTTCCCTATTGGCAAGAA+AGG 0.391626 7_4:-34866774 None:intergenic
CGATTAAGCTACCATTTCCT+TGG 0.394976 7_4:-34866849 None:intergenic
GTGGCATAGGGTTCCACTAT+TGG 0.406540 7_4:+34864261 Msa1150970:CDS
TTCAATGTTATCCAAGGAAA+TGG 0.409490 7_4:+34866838 Msa1150970:three_prime_UTR
ATTGTCCTTTCTTGCCAATA+GGG 0.415169 7_4:+34866769 Msa1150970:three_prime_UTR
TTGAAGAGTTTCATAAGAGA+TGG 0.432499 7_4:+34864168 Msa1150970:exon
TCCACAAATTATTAGGCAAC+AGG 0.435343 7_4:+34864936 Msa1150970:CDS
CAATGATAGTCTCTAAATCT+TGG 0.443615 7_4:+34866796 Msa1150970:three_prime_UTR
ATTGGAAGGCTTTGAAGCTA+TGG 0.448363 7_4:+34866660 Msa1150970:CDS
ACATACAGATGGGATAGGTT+TGG 0.452194 7_4:+34863821 Msa1150970:five_prime_UTR
TAGTAGTAGCCAATGGAATT+GGG 0.454217 7_4:+34866699 Msa1150970:CDS
GCAGGTGTGGGTCGAATATG+AGG 0.468423 7_4:+34864127 Msa1150970:five_prime_UTR
GAAAGAGTTGTAGGCTAAGA+TGG 0.478279 7_4:+34864843 Msa1150970:CDS
TGAAGAGTTTCATAAGAGAT+GGG 0.479761 7_4:+34864169 Msa1150970:exon
CCTTCCAATTGAAAATCCAT+TGG 0.480109 7_4:-34866646 None:intergenic
CCAATTTCTTTGAGATGATG+AGG 0.486106 7_4:+34863886 Msa1150970:five_prime_UTR
CTGATTGCAGGAAGGCTACC+AGG 0.490561 7_4:+34866313 Msa1150970:CDS
TGGTAGCCTTCCTGCAATCA+GGG 0.498009 7_4:-34866311 None:intergenic
AACAATATGGTGAAGGAAAG+TGG 0.501654 7_4:+34864242 Msa1150970:CDS
CTCTAGAAGCTGATCAAGAT+AGG 0.501983 7_4:+34866395 Msa1150970:CDS
GACCGACTTAGCCCTAAAAC+TGG 0.509527 7_4:+34866929 Msa1150970:three_prime_UTR
TCTCTTGTTGAACTAGAACT+TGG 0.510624 7_4:-34866516 None:intergenic
TGTTCAAATTATTAGGCCAC+AGG 0.511354 7_4:+34866435 Msa1150970:CDS
TCCTTTCTTGCCAATAGGGA+AGG 0.511888 7_4:+34866773 Msa1150970:three_prime_UTR
CATGATGATGTATTCATGCT+TGG 0.512087 7_4:+34866597 Msa1150970:CDS
GAACCAATGTTTCTTGCCTG+TGG 0.513007 7_4:-34866451 None:intergenic
ATGCTTGGACCAACAAGGTA+TGG 0.517260 7_4:+34866612 Msa1150970:CDS
ACTCACCAACCATACCTTGT+TGG 0.533165 7_4:-34866621 None:intergenic
GCTATGGTCAGTGGAGGAGA+GGG 0.537118 7_4:+34866676 Msa1150970:CDS
CATAGGGTTCCACTATTGGC+TGG 0.537883 7_4:+34864265 Msa1150970:CDS
TTTAAATAAACCAATAAAGT+CGG 0.540827 7_4:+34866898 Msa1150970:three_prime_UTR
CACATATATATAAAAGATGC+AGG 0.544552 7_4:+34864109 Msa1150970:five_prime_UTR
ATGGTGAAGGAAAGTGGCAT+AGG 0.546971 7_4:+34864248 Msa1150970:CDS
TATGGTTGGTGAGTTTCCAA+TGG 0.550568 7_4:+34866630 Msa1150970:CDS
GGCTTTGAAGCTATGGTCAG+TGG 0.555043 7_4:+34866667 Msa1150970:CDS
AGGCCACAGGCAAGAAACAT+TGG 0.557790 7_4:+34866448 Msa1150970:CDS
CATAACAACATTTGATGCTG+AGG 0.561325 7_4:+34866543 Msa1150970:CDS
TCAAAGTTCAATGTTATCCA+AGG 0.564717 7_4:+34866832 Msa1150970:three_prime_UTR
TATATAAAAGATGCAGGTGT+GGG 0.570714 7_4:+34864115 Msa1150970:five_prime_UTR
GCAAATCCTCCCAATTCCAT+TGG 0.571731 7_4:-34866708 None:intergenic
TGAACTAGAACTTGGTCAGT+TGG 0.578769 7_4:-34866508 None:intergenic
GAGATGATGAGGACCACCAT+TGG 0.581200 7_4:+34863897 Msa1150970:five_prime_UTR
TGCATACAACAATATGGTGA+AGG 0.582605 7_4:+34864235 Msa1150970:CDS
ATATATAAAAGATGCAGGTG+TGG 0.586437 7_4:+34864114 Msa1150970:five_prime_UTR
AAATGACAGAAACATACAGA+TGG 0.589158 7_4:+34863810 Msa1150970:five_prime_UTR
TGGTGAAGGAAAGTGGCATA+GGG 0.591311 7_4:+34864249 Msa1150970:CDS
AGCTATGGTCAGTGGAGGAG+AGG 0.593001 7_4:+34866675 Msa1150970:CDS
AAGAGATGGGTGGTGTTGCA+TGG 0.595869 7_4:+34864182 Msa1150970:exon
GAGAGGGTAGTAGTAGCCAA+TGG 0.596813 7_4:+34866692 Msa1150970:CDS
CAGAAACATACAGATGGGAT+AGG 0.598013 7_4:+34863816 Msa1150970:five_prime_UTR
TAGACATCATAAGTATCCAA+TGG 0.619370 7_4:-34863913 None:intergenic
ATGTGCCAAACTAGCCAGCA+AGG 0.620798 7_4:-34864029 None:intergenic
ATAACAACATTTGATGCTGA+GGG 0.621062 7_4:+34866544 Msa1150970:CDS
TTGCAGGAAGGCTACCAGGA+AGG 0.630189 7_4:+34866317 Msa1150970:CDS
AATGACAGAAACATACAGAT+GGG 0.633108 7_4:+34863811 Msa1150970:five_prime_UTR
TATTCATGCTTGGACCAACA+AGG 0.644707 7_4:+34866607 Msa1150970:CDS
CTACGTCCTAACATAAAGAG+AGG 0.645909 7_4:+34864875 Msa1150970:CDS
GGTGGTCCCTGATTGCAGGA+AGG 0.651093 7_4:+34866305 Msa1150970:intron
TTGGACCAACAAGGTATGGT+TGG 0.660368 7_4:+34866616 Msa1150970:CDS
TTTGAAGCTATGGTCAGTGG+AGG 0.663191 7_4:+34866670 Msa1150970:CDS
AGAGTTTCATAAGAGATGGG+TGG 0.667150 7_4:+34864172 Msa1150970:exon
ACATCATAAGTATCCAATGG+TGG 0.679035 7_4:-34863910 None:intergenic
TAGTAGCCAATGGAATTGGG+AGG 0.680463 7_4:+34866702 Msa1150970:CDS
CAGGTGTGGGTCGAATATGA+GGG 0.695339 7_4:+34864128 Msa1150970:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAAAAAATCAAGAAAA+AGG - chr7_4:34864313-34864332 None:intergenic 15.0%
!!! CAAAAAAAAGTATATAGTAT+AGG + chr7_4:34865150-34865169 Msa1150970:intron 15.0%
!! AATAAAACATTTGTATTCAA+TGG + chr7_4:34865278-34865297 Msa1150970:intron 15.0%
!!! AAAAGAAAATTTTAACACAT+GGG - chr7_4:34866038-34866057 None:intergenic 15.0%
!!! CACATATAAAAATGATTTTT+CGG - chr7_4:34866122-34866141 None:intergenic 15.0%
!! TTTAAATAAACCAATAAAGT+CGG + chr7_4:34866898-34866917 Msa1150970:three_prime_UTR 15.0%
!! ATGATGTCTATTTAAAAACA+TGG + chr7_4:34863926-34863945 Msa1150970:five_prime_UTR 20.0%
!! GATTTATTACAAGATCAATT+TGG - chr7_4:34865677-34865696 None:intergenic 20.0%
!! TTGTAATAAATCACTATTAG+TGG + chr7_4:34865685-34865704 Msa1150970:intron 20.0%
!! TGTAATAAATCACTATTAGT+GGG + chr7_4:34865686-34865705 Msa1150970:intron 20.0%
!!! TAACTAAGCACTTTTTTTTA+GGG - chr7_4:34865888-34865907 None:intergenic 20.0%
!!! TTAACTAAGCACTTTTTTTT+AGG - chr7_4:34865889-34865908 None:intergenic 20.0%
!! TTATCCAAATATTACCATAA+TGG + chr7_4:34865914-34865933 Msa1150970:intron 20.0%
!! AAAACCATTATGGTAATATT+TGG - chr7_4:34865921-34865940 None:intergenic 20.0%
!! GTTAATAACTAAAACCATTA+TGG - chr7_4:34865931-34865950 None:intergenic 20.0%
!!! CAAAAGAAAATTTTAACACA+TGG - chr7_4:34866039-34866058 None:intergenic 20.0%
!!! CGAAAAATCATTTTTATATG+TGG + chr7_4:34866120-34866139 Msa1150970:intron 20.0%
!!! ATTTGTTACTAATTGCAAAA+AGG - chr7_4:34866252-34866271 None:intergenic 20.0%
!!! TTTTTGCAATTAGTAACAAA+TGG + chr7_4:34866251-34866270 Msa1150970:intron 20.0%
!! TTAGATATGGATTTGTATAA+TGG + chr7_4:34866733-34866752 Msa1150970:CDS 20.0%
! GCTTCAAAATTCATAGTAAA+TGG - chr7_4:34863986-34864005 None:intergenic 25.0%
!! TCTTTTATATATATGTGTGG+TGG - chr7_4:34864106-34864125 None:intergenic 25.0%
!! GCATCTTTTATATATATGTG+TGG - chr7_4:34864109-34864128 None:intergenic 25.0%
! CACATATATATAAAAGATGC+AGG + chr7_4:34864109-34864128 Msa1150970:five_prime_UTR 25.0%
! AAGAAATGCATACAACAATA+TGG + chr7_4:34864229-34864248 Msa1150970:CDS 25.0%
!!! TTAAATATCCGTTTTTGAGA+AGG - chr7_4:34864338-34864357 None:intergenic 25.0%
!!! ATAATGAGATCCGTTTTAAA+AGG - chr7_4:34864448-34864467 None:intergenic 25.0%
!!! ATCTCATTATTTTGAGAGAT+TGG + chr7_4:34864458-34864477 Msa1150970:intron 25.0%
!!! TCTTCATTATTTTGAGAGAT+TGG + chr7_4:34864643-34864662 Msa1150970:intron 25.0%
! AATCAACTTAGTAAGTATGT+TGG - chr7_4:34864772-34864791 None:intergenic 25.0%
!! TTTCTTTTTCCATCAAACAT+TGG + chr7_4:34864795-34864814 Msa1150970:intron 25.0%
! AAATTTCCTCTCTTTATGTT+AGG - chr7_4:34864884-34864903 None:intergenic 25.0%
! AACACATTAGAAAATACCAA+AGG - chr7_4:34864985-34865004 None:intergenic 25.0%
! TCAATTTGAACCAATTGATT+TGG + chr7_4:34865188-34865207 Msa1150970:intron 25.0%
!!! AACCAATTGATTTGGTATTT+TGG + chr7_4:34865196-34865215 Msa1150970:intron 25.0%
! AAATTGAATTATTTAGGTCC+TGG - chr7_4:34865464-34865483 None:intergenic 25.0%
! GGGAGAAAATTGAATTATTT+AGG - chr7_4:34865470-34865489 None:intergenic 25.0%
! GATCCAAATAAATAGTTCAT+GGG - chr7_4:34865490-34865509 None:intergenic 25.0%
! TGATCCAAATAAATAGTTCA+TGG - chr7_4:34865491-34865510 None:intergenic 25.0%
! GAACTATTTATTTGGATCAA+TGG + chr7_4:34865492-34865511 Msa1150970:intron 25.0%
! ATTTATTTGGATCAATGGAT+TGG + chr7_4:34865497-34865516 Msa1150970:intron 25.0%
!! GATCTAAAACTTGAGATAAT+GGG + chr7_4:34865523-34865542 Msa1150970:intron 25.0%
! ATTATTCGAGGAACTATATT+TGG - chr7_4:34865629-34865648 None:intergenic 25.0%
! CGTTTAGAAAATATTATTCG+AGG - chr7_4:34865641-34865660 None:intergenic 25.0%
! ATTACAAGATCAATTTGGAT+TGG - chr7_4:34865672-34865691 None:intergenic 25.0%
! AATAAGCAGAAAACAACATA+TGG - chr7_4:34865740-34865759 None:intergenic 25.0%
! ACAATAAAACTATAACAAGC+GGG - chr7_4:34865964-34865983 None:intergenic 25.0%
! CACAATAAAACTATAACAAG+CGG - chr7_4:34865965-34865984 None:intergenic 25.0%
! AAATTGTAGCAAATAGCTTA+GGG - chr7_4:34866278-34866297 None:intergenic 25.0%
! AAAATTGTAGCAAATAGCTT+AGG - chr7_4:34866279-34866298 None:intergenic 25.0%
!!! ATTTGCTACAATTTTTCTTC+AGG + chr7_4:34866284-34866303 Msa1150970:intron 25.0%
! CAAATGATGTGAAAAACTAT+TGG + chr7_4:34866344-34866363 Msa1150970:CDS 25.0%
! CCTAATAATTTGAACATCTT+TGG - chr7_4:34866431-34866450 None:intergenic 25.0%
! CCAAAGATGTTCAAATTATT+AGG + chr7_4:34866428-34866447 Msa1150970:CDS 25.0%
AAATGACAGAAACATACAGA+TGG + chr7_4:34863810-34863829 Msa1150970:five_prime_UTR 30.0%
AATGACAGAAACATACAGAT+GGG + chr7_4:34863811-34863830 Msa1150970:five_prime_UTR 30.0%
TAGACATCATAAGTATCCAA+TGG - chr7_4:34863916-34863935 None:intergenic 30.0%
CTATTTAAAAACATGGAGCT+TGG + chr7_4:34863933-34863952 Msa1150970:five_prime_UTR 30.0%
ATATATAAAAGATGCAGGTG+TGG + chr7_4:34864114-34864133 Msa1150970:five_prime_UTR 30.0%
TATATAAAAGATGCAGGTGT+GGG + chr7_4:34864115-34864134 Msa1150970:five_prime_UTR 30.0%
TTGAAGAGTTTCATAAGAGA+TGG + chr7_4:34864168-34864187 Msa1150970:exon 30.0%
TGAAGAGTTTCATAAGAGAT+GGG + chr7_4:34864169-34864188 Msa1150970:exon 30.0%
TCTATTTGCCTTCTCAAAAA+CGG + chr7_4:34864327-34864346 Msa1150970:intron 30.0%
!! TCAACTGTGACCTTTTAAAA+CGG + chr7_4:34864435-34864454 Msa1150970:intron 30.0%
!! TCATTTTAATAGTGAACCCA+AGG - chr7_4:34864506-34864525 None:intergenic 30.0%
TCAATTTAATAGTGAACCCA+AGG - chr7_4:34864691-34864710 None:intergenic 30.0%
TTCAACAAACCAATGTTTGA+TGG - chr7_4:34864807-34864826 None:intergenic 30.0%
!! ATCAAACATTGGTTTGTTGA+AGG + chr7_4:34864806-34864825 Msa1150970:intron 30.0%
GTCAAACTCCACAAATTATT+AGG + chr7_4:34864929-34864948 Msa1150970:CDS 30.0%
! TGATCTTTTAGACTTTCCTT+TGG + chr7_4:34864966-34864985 Msa1150970:intron 30.0%
! TGTTCTAAGTTCTAACAACT+AGG + chr7_4:34865001-34865020 Msa1150970:intron 30.0%
CACCAAAATACCAAATCAAT+TGG - chr7_4:34865201-34865220 None:intergenic 30.0%
!! TTTTTAGCAGGTAAGATGTT+TGG + chr7_4:34865230-34865249 Msa1150970:intron 30.0%
GAAATCAATGTAGGACTTAT+TGG - chr7_4:34865353-34865372 None:intergenic 30.0%
!! TCCTACATTGATTTCTTCTA+AGG + chr7_4:34865358-34865377 Msa1150970:intron 30.0%
ACCTTAGAAGAAATCAATGT+AGG - chr7_4:34865362-34865381 None:intergenic 30.0%
!! ATTTCTTCTAAGGTGTCAAT+TGG + chr7_4:34865368-34865387 Msa1150970:intron 30.0%
TCTCCCATGAACTATTTATT+TGG + chr7_4:34865484-34865503 Msa1150970:intron 30.0%
! CGATCTAAAACTTGAGATAA+TGG + chr7_4:34865522-34865541 Msa1150970:intron 30.0%
TCCAAAAAACGATTCATAAG+TGG + chr7_4:34865551-34865570 Msa1150970:intron 30.0%
!!! TCCACTTATGAATCGTTTTT+TGG - chr7_4:34865555-34865574 None:intergenic 30.0%
ATAACAACATTTGATGCTGA+GGG + chr7_4:34866544-34866563 Msa1150970:CDS 30.0%
!! GTTTCCAATGGATTTTCAAT+TGG + chr7_4:34866642-34866661 Msa1150970:CDS 30.0%
CAATGATAGTCTCTAAATCT+TGG + chr7_4:34866796-34866815 Msa1150970:three_prime_UTR 30.0%
TCAAAGTTCAATGTTATCCA+AGG + chr7_4:34866832-34866851 Msa1150970:three_prime_UTR 30.0%
TTCAATGTTATCCAAGGAAA+TGG + chr7_4:34866838-34866857 Msa1150970:three_prime_UTR 30.0%
CCTCATCATCTCAAAGAAAT+TGG - chr7_4:34863889-34863908 None:intergenic 35.0%
!! CCAATTTCTTTGAGATGATG+AGG + chr7_4:34863886-34863905 Msa1150970:five_prime_UTR 35.0%
ACATCATAAGTATCCAATGG+TGG - chr7_4:34863913-34863932 None:intergenic 35.0%
!!! CAGAGTTTTAGAAAGAGCAA+TGG + chr7_4:34863959-34863978 Msa1150970:five_prime_UTR 35.0%
TGCATACAACAATATGGTGA+AGG + chr7_4:34864235-34864254 Msa1150970:CDS 35.0%
AACAATATGGTGAAGGAAAG+TGG + chr7_4:34864242-34864261 Msa1150970:CDS 35.0%
! TAACTTTTACCAGCCAATAG+TGG - chr7_4:34864277-34864296 None:intergenic 35.0%
TCTTTGAACTATGTCATCTG+AGG + chr7_4:34864363-34864382 Msa1150970:intron 35.0%
CGATCTCTGACAAATATGTA+TGG + chr7_4:34864388-34864407 Msa1150970:intron 35.0%
CTCTTGAAGTATGTTATCTG+AGG + chr7_4:34864546-34864565 Msa1150970:intron 35.0%
CGATCTCTAACAAACATGTA+TGG + chr7_4:34864571-34864590 Msa1150970:intron 35.0%
TAATGAAGATCCGTCTTAAG+AGG - chr7_4:34864632-34864651 None:intergenic 35.0%
ATTGGTCCATACTCTTAACT+AGG + chr7_4:34864661-34864680 Msa1150970:intron 35.0%
! GGTTTTCCTAGTTAAGAGTA+TGG - chr7_4:34864670-34864689 None:intergenic 35.0%
ACTCTTAACTAGGAAAACCT+TGG + chr7_4:34864671-34864690 Msa1150970:intron 35.0%
CTCTTAACTAGGAAAACCTT+GGG + chr7_4:34864672-34864691 Msa1150970:intron 35.0%
ACTTGTTCAATCTTAGCACT+TGG + chr7_4:34864730-34864749 Msa1150970:intron 35.0%
! AAAGAGAGGAAATTTTGCTG+AGG + chr7_4:34864889-34864908 Msa1150970:CDS 35.0%
TCCACAAATTATTAGGCAAC+AGG + chr7_4:34864936-34864955 Msa1150970:CDS 35.0%
ACCTGTTGCCTAATAATTTG+TGG - chr7_4:34864940-34864959 None:intergenic 35.0%
! TAAGTTCTAACAACTAGGCA+TGG + chr7_4:34865006-34865025 Msa1150970:intron 35.0%
! AAGTTCTAACAACTAGGCAT+GGG + chr7_4:34865007-34865026 Msa1150970:intron 35.0%
!! AGCCTTATGCAGTTTTTCAA+AGG + chr7_4:34865037-34865056 Msa1150970:intron 35.0%
! CACCTTTGAAAAACTGCATA+AGG - chr7_4:34865042-34865061 None:intergenic 35.0%
!!! GTGTGTTGTAGATTTTTAGC+AGG + chr7_4:34865218-34865237 Msa1150970:intron 35.0%
GTTATCCATTCTAGTCACTA+TGG - chr7_4:34865404-34865423 None:intergenic 35.0%
GTTGAAGTCACTAAATTCTG+AGG + chr7_4:34865575-34865594 Msa1150970:intron 35.0%
!! TATAACAAGCGGGCTATAAA+GGG - chr7_4:34865954-34865973 None:intergenic 35.0%
CTAATTGCAAAAAGGTGACT+TGG - chr7_4:34866244-34866263 None:intergenic 35.0%
! TGCTACAATTTTTCTTCAGG+TGG + chr7_4:34866287-34866306 Msa1150970:intron 35.0%
TGTTCAAATTATTAGGCCAC+AGG + chr7_4:34866435-34866454 Msa1150970:CDS 35.0%
TCTCTTGTTGAACTAGAACT+TGG - chr7_4:34866519-34866538 None:intergenic 35.0%
CATAACAACATTTGATGCTG+AGG + chr7_4:34866543-34866562 Msa1150970:CDS 35.0%
! CATGATGATGTATTCATGCT+TGG + chr7_4:34866597-34866616 Msa1150970:CDS 35.0%
CCTTCCAATTGAAAATCCAT+TGG - chr7_4:34866649-34866668 None:intergenic 35.0%
!! CCAATGGATTTTCAATTGGA+AGG + chr7_4:34866646-34866665 Msa1150970:CDS 35.0%
TAGTAGTAGCCAATGGAATT+GGG + chr7_4:34866699-34866718 Msa1150970:CDS 35.0%
TATTGTCCTTTCTTGCCAAT+AGG + chr7_4:34866768-34866787 Msa1150970:three_prime_UTR 35.0%
ATTGTCCTTTCTTGCCAATA+GGG + chr7_4:34866769-34866788 Msa1150970:three_prime_UTR 35.0%
CAGAAACATACAGATGGGAT+AGG + chr7_4:34863816-34863835 Msa1150970:five_prime_UTR 40.0%
ACATACAGATGGGATAGGTT+TGG + chr7_4:34863821-34863840 Msa1150970:five_prime_UTR 40.0%
!! GGATAGGTTTGGCTTTGAAT+AGG + chr7_4:34863832-34863851 Msa1150970:five_prime_UTR 40.0%
TGTATATTACTCTGCCTTGC+TGG + chr7_4:34864015-34864034 Msa1150970:five_prime_UTR 40.0%
CGAATATGAGGGTGAAAAAG+TGG + chr7_4:34864139-34864158 Msa1150970:five_prime_UTR 40.0%
AGAGTTTCATAAGAGATGGG+TGG + chr7_4:34864172-34864191 Msa1150970:exon 40.0%
ATTGGTCCATACTCTTGACT+AGG + chr7_4:34864476-34864495 Msa1150970:intron 40.0%
! GGTTTTCCTAGTCAAGAGTA+TGG - chr7_4:34864485-34864504 None:intergenic 40.0%
ACTCTTGACTAGGAAAACCT+TGG + chr7_4:34864486-34864505 Msa1150970:intron 40.0%
CTCTTGACTAGGAAAACCTT+GGG + chr7_4:34864487-34864506 Msa1150970:intron 40.0%
ACAGATGCAGAAAGAGTTGT+AGG + chr7_4:34864834-34864853 Msa1150970:CDS 40.0%
GAAAGAGTTGTAGGCTAAGA+TGG + chr7_4:34864843-34864862 Msa1150970:CDS 40.0%
CTACGTCCTAACATAAAGAG+AGG + chr7_4:34864875-34864894 Msa1150970:CDS 40.0%
! AAATTTTGCTGAGGAGGAAG+TGG + chr7_4:34864898-34864917 Msa1150970:CDS 40.0%
TTGACAATTCACGCAAGGAT+TGG - chr7_4:34865326-34865345 None:intergenic 40.0%
AATCCTTGCGTGAATTGTCA+AGG + chr7_4:34865325-34865344 Msa1150970:intron 40.0%
TTTAGGTCCTGGAAGATTGA+CGG - chr7_4:34865453-34865472 None:intergenic 40.0%
!! ATAACAAGCGGGCTATAAAG+GGG - chr7_4:34865953-34865972 None:intergenic 40.0%
!! CTATAACAAGCGGGCTATAA+AGG - chr7_4:34865955-34865974 None:intergenic 40.0%
! CTCTAGAAGCTGATCAAGAT+AGG + chr7_4:34866395-34866414 Msa1150970:CDS 40.0%
TGAACTAGAACTTGGTCAGT+TGG - chr7_4:34866511-34866530 None:intergenic 40.0%
TATTCATGCTTGGACCAACA+AGG + chr7_4:34866607-34866626 Msa1150970:CDS 40.0%
!! TATGGTTGGTGAGTTTCCAA+TGG + chr7_4:34866630-34866649 Msa1150970:CDS 40.0%
!! ATTGGAAGGCTTTGAAGCTA+TGG + chr7_4:34866660-34866679 Msa1150970:CDS 40.0%
GTAGTAGTAGCCAATGGAAT+TGG + chr7_4:34866698-34866717 Msa1150970:CDS 40.0%
! GGAGGATTTGCTCTTAGATA+TGG + chr7_4:34866720-34866739 Msa1150970:CDS 40.0%
ACTATCATTGCCTTCCCTAT+TGG - chr7_4:34866786-34866805 None:intergenic 40.0%
CGATTAAGCTACCATTTCCT+TGG - chr7_4:34866852-34866871 None:intergenic 40.0%
! TCTCACAAGACCGACTTTAT+TGG - chr7_4:34866911-34866930 None:intergenic 40.0%
TGAGGGTGAAAAAGTGGTAG+TGG + chr7_4:34864145-34864164 Msa1150970:five_prime_UTR 45.0%
ATGGTGAAGGAAAGTGGCAT+AGG + chr7_4:34864248-34864267 Msa1150970:CDS 45.0%
TGGTGAAGGAAAGTGGCATA+GGG + chr7_4:34864249-34864268 Msa1150970:CDS 45.0%
CAACTGTCGACCTCTTAAGA+CGG + chr7_4:34864619-34864638 Msa1150970:intron 45.0%
! GAGAGGAAATTTTGCTGAGG+AGG + chr7_4:34864892-34864911 Msa1150970:CDS 45.0%
!! TCACGCAAGGATTGGTCTTT+GGG - chr7_4:34865318-34865337 None:intergenic 45.0%
!! TTCACGCAAGGATTGGTCTT+TGG - chr7_4:34865319-34865338 None:intergenic 45.0%
GATCCTTGACAATTCACGCA+AGG - chr7_4:34865331-34865350 None:intergenic 45.0%
TGCGTCCATAGTGACTAGAA+TGG + chr7_4:34865396-34865415 Msa1150970:intron 45.0%
TTAGGTCCTGGAAGATTGAC+GGG - chr7_4:34865452-34865471 None:intergenic 45.0%
!! ACATCATTTGCTGTCCTTCC+TGG - chr7_4:34866334-34866353 None:intergenic 45.0%
GAACCAATGTTTCTTGCCTG+TGG - chr7_4:34866454-34866473 None:intergenic 45.0%
!! GGTCAGTTGGTGATTCTACT+TGG - chr7_4:34866498-34866517 None:intergenic 45.0%
ATGCTTGGACCAACAAGGTA+TGG + chr7_4:34866612-34866631 Msa1150970:CDS 45.0%
TTGGACCAACAAGGTATGGT+TGG + chr7_4:34866616-34866635 Msa1150970:CDS 45.0%
ACTCACCAACCATACCTTGT+TGG - chr7_4:34866624-34866643 None:intergenic 45.0%
! TTTGAAGCTATGGTCAGTGG+AGG + chr7_4:34866670-34866689 Msa1150970:CDS 45.0%
TAGTAGCCAATGGAATTGGG+AGG + chr7_4:34866702-34866721 Msa1150970:CDS 45.0%
GCAAATCCTCCCAATTCCAT+TGG - chr7_4:34866711-34866730 None:intergenic 45.0%
TCCTTTCTTGCCAATAGGGA+AGG + chr7_4:34866773-34866792 Msa1150970:three_prime_UTR 45.0%
!!! TTTAAAAAGTAAATTTTATT+AGG + chr7_4:34866147-34866166 Msa1150970:intron 5.0%
GAGATGATGAGGACCACCAT+TGG + chr7_4:34863897-34863916 Msa1150970:five_prime_UTR 50.0%
ATGTGCCAAACTAGCCAGCA+AGG - chr7_4:34864032-34864051 None:intergenic 50.0%
CAGGTGTGGGTCGAATATGA+GGG + chr7_4:34864128-34864147 Msa1150970:five_prime_UTR 50.0%
!! AAGAGATGGGTGGTGTTGCA+TGG + chr7_4:34864182-34864201 Msa1150970:exon 50.0%
GTGGCATAGGGTTCCACTAT+TGG + chr7_4:34864261-34864280 Msa1150970:CDS 50.0%
CATAGGGTTCCACTATTGGC+TGG + chr7_4:34864265-34864284 Msa1150970:CDS 50.0%
!! CACGCAAGGATTGGTCTTTG+GGG - chr7_4:34865317-34865336 None:intergenic 50.0%
TAGGTCCTGGAAGATTGACG+GGG - chr7_4:34865451-34865470 None:intergenic 50.0%
TGGTAGCCTTCCTGCAATCA+GGG - chr7_4:34866314-34866333 None:intergenic 50.0%
AGGCCACAGGCAAGAAACAT+TGG + chr7_4:34866448-34866467 Msa1150970:CDS 50.0%
!! GGCTTTGAAGCTATGGTCAG+TGG + chr7_4:34866667-34866686 Msa1150970:CDS 50.0%
GAGAGGGTAGTAGTAGCCAA+TGG + chr7_4:34866692-34866711 Msa1150970:CDS 50.0%
GCCTTCCCTATTGGCAAGAA+AGG - chr7_4:34866777-34866796 None:intergenic 50.0%
! CTCTGCCTTGCTGGCTAGTT+TGG + chr7_4:34864024-34864043 Msa1150970:five_prime_UTR 55.0%
GCAGGTGTGGGTCGAATATG+AGG + chr7_4:34864127-34864146 Msa1150970:five_prime_UTR 55.0%
TTCAGGTGGTCCCTGATTGC+AGG + chr7_4:34866301-34866320 Msa1150970:intron 55.0%
CTGGTAGCCTTCCTGCAATC+AGG - chr7_4:34866315-34866334 None:intergenic 55.0%
CTGATTGCAGGAAGGCTACC+AGG + chr7_4:34866313-34866332 Msa1150970:CDS 55.0%
TTGCAGGAAGGCTACCAGGA+AGG + chr7_4:34866317-34866336 Msa1150970:CDS 55.0%
AGCTATGGTCAGTGGAGGAG+AGG + chr7_4:34866675-34866694 Msa1150970:CDS 55.0%
GCTATGGTCAGTGGAGGAGA+GGG + chr7_4:34866676-34866695 Msa1150970:CDS 55.0%
GTTCGCCCCGTCAATCTTCC+AGG + chr7_4:34865443-34865462 Msa1150970:intron 60.0%
GGTGGTCCCTGATTGCAGGA+AGG + chr7_4:34866305-34866324 Msa1150970:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 34863791 34866950 34863791 ID=Msa1150970;Name=Msa1150970
chr7_4 mRNA 34863791 34866950 34863791 ID=Msa1150970-mRNA-1;Parent=Msa1150970;Name=Msa1150970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=396|1|1|1|1|1|3|185|229
chr7_4 exon 34863791 34864286 34863791 ID=Msa1150970-mRNA-1:exon:8255;Parent=Msa1150970-mRNA-1
chr7_4 exon 34864828 34864957 34864828 ID=Msa1150970-mRNA-1:exon:8256;Parent=Msa1150970-mRNA-1
chr7_4 exon 34866306 34866950 34866306 ID=Msa1150970-mRNA-1:exon:8257;Parent=Msa1150970-mRNA-1
chr7_4 five_prime_UTR 34863791 34864186 34863791 ID=Msa1150970-mRNA-1:five_prime_utr;Parent=Msa1150970-mRNA-1
chr7_4 CDS 34864187 34864286 34864187 ID=Msa1150970-mRNA-1:cds;Parent=Msa1150970-mRNA-1
chr7_4 CDS 34864828 34864957 34864828 ID=Msa1150970-mRNA-1:cds;Parent=Msa1150970-mRNA-1
chr7_4 CDS 34866306 34866765 34866306 ID=Msa1150970-mRNA-1:cds;Parent=Msa1150970-mRNA-1
chr7_4 three_prime_UTR 34866766 34866950 34866766 ID=Msa1150970-mRNA-1:three_prime_utr;Parent=Msa1150970-mRNA-1
Gene Sequence

>Msa1150970

ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACTTGCTTAAGAAATGCATACAACAATATGGTGAAGGAAAGTGGCATAGGGTTCCACTATTGGCTGGTCTAAACAGATGCAGAAAGAGTTGTAGGCTAAGATGGTTGAACTATCTACGTCCTAACATAAAGAGAGGAAATTTTGCTGAGGAGGAAGTGGAAATGATTGTCAAACTCCACAAATTATTAGGCAACAGGTGGTCCCTGATTGCAGGAAGGCTACCAGGAAGGACAGCAAATGATGTGAAAAACTATTGGAACTGTCATCTAAGCAAAAAACTAAATGCTCTAGAAGCTGATCAAGATAGGTCACAATCATCCAAAGATGTTCAAATTATTAGGCCACAGGCAAGAAACATTGGTTCAAGCTCAGTGAAAAAAAGAAGCCAAGTAGAATCACCAACTGACCAAGTTCTAGTTCAACAAGAGAGTGACATAACAACATTTGATGCTGAGGGAAAGAATCATATGCTTGAATCACAACAAGACATGATGATGTATTCATGCTTGGACCAACAAGGTATGGTTGGTGAGTTTCCAATGGATTTTCAATTGGAAGGCTTTGAAGCTATGGTCAGTGGAGGAGAGGGTAGTAGTAGCCAATGGAATTGGGAGGATTTGCTCTTAGATATGGATTTGTATAATGGTTTTTCTTAG
Protein sequence

>Msa1150970

MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFAEEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNALEADQDRSQSSKDVQIIRPQARNIGSSSVKKRSQVESPTDQVLVQQESDITTFDAEGKNHMLESQQDMMMYSCLDQQGMVGEFPMDFQLEGFEAMVSGGEGSSSQWNWEDLLLDMDLYNGFS*