Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850500 | XP_003615100.1 | 91.324 | 219 | 13 | 1 | 1 | 219 | 1 | 213 | 1.30e-136 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850500 | G7KB77 | 91.324 | 219 | 13 | 1 | 1 | 219 | 1 | 213 | 6.22e-137 | 392 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0850500 | 0.818812 | 1.612680e-52 | -8.615850e-47 |
| Msa0005050 | Msa0850500 | 0.802867 | 4.575737e-49 | -8.615850e-47 |
| Msa0008850 | Msa0850500 | 0.804007 | 2.655644e-49 | -8.615850e-47 |
| Msa0011720 | Msa0850500 | 0.835185 | 1.944349e-56 | -8.615850e-47 |
| Msa0012440 | Msa0850500 | 0.841997 | 3.384172e-58 | -8.615850e-47 |
| Msa0017120 | Msa0850500 | 0.814585 | 1.429391e-51 | -8.615850e-47 |
| Msa0024680 | Msa0850500 | 0.821015 | 5.054287e-53 | -8.615850e-47 |
| Msa0027540 | Msa0850500 | 0.834596 | 2.735294e-56 | -8.615850e-47 |
| Msa0030000 | Msa0850500 | 0.808112 | 3.634882e-50 | -8.615850e-47 |
| Msa0030590 | Msa0850500 | 0.804226 | 2.391074e-49 | -8.615850e-47 |
| Msa0030730 | Msa0850500 | 0.804815 | 1.802492e-49 | -8.615850e-47 |
| Msa0036430 | Msa0850500 | 0.826894 | 2.111227e-54 | -8.615850e-47 |
| Msa0041540 | Msa0850500 | 0.803592 | 3.238124e-49 | -8.615850e-47 |
| Msa0044020 | Msa0850500 | 0.817867 | 2.639034e-52 | -8.615850e-47 |
| Msa0053110 | Msa0850500 | 0.813129 | 2.992900e-51 | -8.615850e-47 |
| Msa0057240 | Msa0850500 | 0.851709 | 7.437704e-61 | -8.615850e-47 |
| Msa0060600 | Msa0850500 | 0.815048 | 1.128355e-51 | -8.615850e-47 |
| Msa0074230 | Msa0850500 | 0.807592 | 4.688005e-50 | -8.615850e-47 |
| Msa0075310 | Msa0850500 | 0.839620 | 1.421333e-57 | -8.615850e-47 |
| Msa0084500 | Msa0850500 | 0.815020 | 1.144773e-51 | -8.615850e-47 |
| Msa0084680 | Msa0850500 | 0.815993 | 6.952426e-52 | -8.615850e-47 |
| Msa0089210 | Msa0850500 | 0.803381 | 3.581750e-49 | -8.615850e-47 |
| Msa0094420 | Msa0850500 | 0.829849 | 4.088817e-55 | -8.615850e-47 |
| Msa0098440 | Msa0850500 | 0.802140 | 6.460555e-49 | -8.615850e-47 |
| Msa0102990 | Msa0850500 | 0.800726 | 1.258729e-48 | -8.615850e-47 |
| Msa0105340 | Msa0850500 | 0.825089 | 5.668262e-54 | -8.615850e-47 |
| Msa0105420 | Msa0850500 | 0.808733 | 2.679540e-50 | -8.615850e-47 |
| Msa0113160 | Msa0850500 | 0.805800 | 1.120403e-49 | -8.615850e-47 |
| Msa0120330 | Msa0850500 | 0.833710 | 4.561896e-56 | -8.615850e-47 |
| Msa0602800 | Msa0850500 | 0.817528 | 3.147494e-52 | -8.615850e-47 |
| Msa0607200 | Msa0850500 | 0.800247 | 1.576172e-48 | -8.615850e-47 |
| Msa0607500 | Msa0850500 | 0.821067 | 4.917778e-53 | -8.615850e-47 |
| Msa0614230 | Msa0850500 | 0.811746 | 6.001538e-51 | -8.615850e-47 |
| Msa0619330 | Msa0850500 | 0.831331 | 1.773466e-55 | -8.615850e-47 |
| Msa0619980 | Msa0850500 | 0.894741 | 1.854637e-75 | -8.615850e-47 |
| Msa0620260 | Msa0850500 | 0.802927 | 4.446943e-49 | -8.615850e-47 |
| Msa0621770 | Msa0850500 | 0.849336 | 3.451648e-60 | -8.615850e-47 |
| Msa0621890 | Msa0850500 | 0.829872 | 4.035891e-55 | -8.615850e-47 |
| Msa0622410 | Msa0850500 | 0.802607 | 5.177045e-49 | -8.615850e-47 |
| Msa0625890 | Msa0850500 | 0.810133 | 1.340862e-50 | -8.615850e-47 |
| Msa0631120 | Msa0850500 | 0.828713 | 7.713292e-55 | -8.615850e-47 |
| Msa0638710 | Msa0850500 | 0.802946 | 4.406257e-49 | -8.615850e-47 |
| Msa0640880 | Msa0850500 | 0.835661 | 1.473248e-56 | -8.615850e-47 |
| Msa0642650 | Msa0850500 | 0.838276 | 3.166630e-57 | -8.615850e-47 |
| Msa0642910 | Msa0850500 | 0.820298 | 7.387053e-53 | -8.615850e-47 |
| Msa0645050 | Msa0850500 | 0.823043 | 1.712368e-53 | -8.615850e-47 |
| Msa0652980 | Msa0850500 | 0.826085 | 3.290938e-54 | -8.615850e-47 |
| Msa0654060 | Msa0850500 | 0.831981 | 1.226124e-55 | -8.615850e-47 |
| Msa0659010 | Msa0850500 | 0.802355 | 5.836063e-49 | -8.615850e-47 |
| Msa0663090 | Msa0850500 | 0.843725 | 1.174364e-58 | -8.615850e-47 |
| Msa0663590 | Msa0850500 | 0.817715 | 2.855346e-52 | -8.615850e-47 |
| Msa0663680 | Msa0850500 | 0.820052 | 8.409640e-53 | -8.615850e-47 |
| Msa0665910 | Msa0850500 | -0.812428 | 4.260435e-51 | -8.615850e-47 |
| Msa0669340 | Msa0850500 | 0.821291 | 4.365291e-53 | -8.615850e-47 |
| Msa0677270 | Msa0850500 | 0.800867 | 1.178122e-48 | -8.615850e-47 |
| Msa0678890 | Msa0850500 | 0.839511 | 1.516414e-57 | -8.615850e-47 |
| Msa0681890 | Msa0850500 | 0.846141 | 2.616971e-59 | -8.615850e-47 |
| Msa0686610 | Msa0850500 | 0.801914 | 7.191702e-49 | -8.615850e-47 |
| Msa0691160 | Msa0850500 | 0.818170 | 2.254211e-52 | -8.615850e-47 |
| Msa0695370 | Msa0850500 | 0.806921 | 6.505156e-50 | -8.615850e-47 |
| Msa0706370 | Msa0850500 | 0.857553 | 1.509164e-62 | -8.615850e-47 |
| Msa0707220 | Msa0850500 | 0.811728 | 6.055530e-51 | -8.615850e-47 |
| Msa0707780 | Msa0850500 | 0.806264 | 8.950582e-50 | -8.615850e-47 |
| Msa0722940 | Msa0850500 | 0.821486 | 3.936668e-53 | -8.615850e-47 |
| Msa0723150 | Msa0850500 | 0.824059 | 9.908415e-54 | -8.615850e-47 |
| Msa0724050 | Msa0850500 | 0.805888 | 1.073739e-49 | -8.615850e-47 |
| Msa0730180 | Msa0850500 | 0.821083 | 4.874196e-53 | -8.615850e-47 |
| Msa0733000 | Msa0850500 | 0.804058 | 2.591452e-49 | -8.615850e-47 |
| Msa0740420 | Msa0850500 | 0.811340 | 7.352888e-51 | -8.615850e-47 |
| Msa0741900 | Msa0850500 | 0.848716 | 5.132475e-60 | -8.615850e-47 |
| Msa0743640 | Msa0850500 | 0.807726 | 4.391358e-50 | -8.615850e-47 |
| Msa0747780 | Msa0850500 | 0.813849 | 2.078014e-51 | -8.615850e-47 |
| Msa0754720 | Msa0850500 | -0.809149 | 2.182333e-50 | -8.615850e-47 |
| Msa0761580 | Msa0850500 | 0.806243 | 9.044055e-50 | -8.615850e-47 |
| Msa0763880 | Msa0850500 | 0.806255 | 8.989241e-50 | -8.615850e-47 |
| Msa0772020 | Msa0850500 | 0.913202 | 8.089306e-84 | -8.615850e-47 |
| Msa0772150 | Msa0850500 | 0.802979 | 4.337577e-49 | -8.615850e-47 |
| Msa0775440 | Msa0850500 | 0.801663 | 8.097105e-49 | -8.615850e-47 |
| Msa0782330 | Msa0850500 | 0.803341 | 3.651043e-49 | -8.615850e-47 |
| Msa0789270 | Msa0850500 | 0.801950 | 7.070112e-49 | -8.615850e-47 |
| Msa0789290 | Msa0850500 | 0.800329 | 1.516938e-48 | -8.615850e-47 |
| Msa0789300 | Msa0850500 | 0.800178 | 1.628353e-48 | -8.615850e-47 |
| Msa0790390 | Msa0850500 | -0.818556 | 1.842731e-52 | -8.615850e-47 |
| Msa0795960 | Msa0850500 | 0.805934 | 1.050414e-49 | -8.615850e-47 |
| Msa0803130 | Msa0850500 | 0.802768 | 4.795326e-49 | -8.615850e-47 |
| Msa0810020 | Msa0850500 | 0.930688 | 1.137531e-93 | -8.615850e-47 |
| Msa0812820 | Msa0850500 | 0.809096 | 2.239775e-50 | -8.615850e-47 |
| Msa0820670 | Msa0850500 | 0.841023 | 6.110654e-58 | -8.615850e-47 |
| Msa0822990 | Msa0850500 | 0.851268 | 9.912330e-61 | -8.615850e-47 |
| Msa0833940 | Msa0850500 | 0.808660 | 2.776373e-50 | -8.615850e-47 |
| Msa0837990 | Msa0850500 | 0.813603 | 2.354831e-51 | -8.615850e-47 |
| Msa0841490 | Msa0850500 | 0.800131 | 1.664394e-48 | -8.615850e-47 |
| Msa0128370 | Msa0850500 | 0.800530 | 1.380261e-48 | -8.615850e-47 |
| Msa0130570 | Msa0850500 | 0.825123 | 5.566264e-54 | -8.615850e-47 |
| Msa0134130 | Msa0850500 | 0.865507 | 5.616843e-65 | -8.615850e-47 |
| Msa0135980 | Msa0850500 | 0.818164 | 2.261561e-52 | -8.615850e-47 |
| Msa0139900 | Msa0850500 | 0.818063 | 2.383637e-52 | -8.615850e-47 |
| Msa0141550 | Msa0850500 | 0.800723 | 1.260638e-48 | -8.615850e-47 |
| Msa0141670 | Msa0850500 | 0.824502 | 7.798169e-54 | -8.615850e-47 |
| Msa0142870 | Msa0850500 | 0.809533 | 1.805013e-50 | -8.615850e-47 |
| Msa0143080 | Msa0850500 | 0.803273 | 3.771217e-49 | -8.615850e-47 |
| Msa0145950 | Msa0850500 | 0.814731 | 1.327069e-51 | -8.615850e-47 |
| Msa0146020 | Msa0850500 | 0.804826 | 1.793183e-49 | -8.615850e-47 |
| Msa0146470 | Msa0850500 | 0.806341 | 8.623030e-50 | -8.615850e-47 |
| Msa0149500 | Msa0850500 | 0.810699 | 1.012323e-50 | -8.615850e-47 |
| Msa0149560 | Msa0850500 | 0.850131 | 2.070520e-60 | -8.615850e-47 |
| Msa0151690 | Msa0850500 | 0.821821 | 3.292168e-53 | -8.615850e-47 |
| Msa0157020 | Msa0850500 | 0.802012 | 6.865545e-49 | -8.615850e-47 |
| Msa0161200 | Msa0850500 | 0.821659 | 3.589443e-53 | -8.615850e-47 |
| Msa0168100 | Msa0850500 | 0.828959 | 6.724741e-55 | -8.615850e-47 |
| Msa0169620 | Msa0850500 | 0.819670 | 1.028133e-52 | -8.615850e-47 |
| Msa0172350 | Msa0850500 | 0.804763 | 1.848217e-49 | -8.615850e-47 |
| Msa0176470 | Msa0850500 | 0.809002 | 2.345987e-50 | -8.615850e-47 |
| Msa0183610 | Msa0850500 | 0.819161 | 1.342779e-52 | -8.615850e-47 |
| Msa0183620 | Msa0850500 | 0.828745 | 7.577209e-55 | -8.615850e-47 |
| Msa0185390 | Msa0850500 | 0.821997 | 2.998198e-53 | -8.615850e-47 |
| Msa0188680 | Msa0850500 | -0.820311 | 7.334179e-53 | -8.615850e-47 |
| Msa0191040 | Msa0850500 | 0.818380 | 2.020340e-52 | -8.615850e-47 |
| Msa0194020 | Msa0850500 | 0.812163 | 4.869088e-51 | -8.615850e-47 |
| Msa0200970 | Msa0850500 | 0.844658 | 6.597479e-59 | -8.615850e-47 |
| Msa0203160 | Msa0850500 | 0.861497 | 9.841995e-64 | -8.615850e-47 |
| Msa0207000 | Msa0850500 | 0.847307 | 1.256356e-59 | -8.615850e-47 |
| Msa0208520 | Msa0850500 | 0.839908 | 1.195475e-57 | -8.615850e-47 |
| Msa0212370 | Msa0850500 | 0.800519 | 1.387406e-48 | -8.615850e-47 |
| Msa0219190 | Msa0850500 | 0.845939 | 2.969371e-59 | -8.615850e-47 |
| Msa0222070 | Msa0850500 | 0.815956 | 7.085299e-52 | -8.615850e-47 |
| Msa0222120 | Msa0850500 | 0.819697 | 1.013510e-52 | -8.615850e-47 |
| Msa0227490 | Msa0850500 | 0.813998 | 1.926772e-51 | -8.615850e-47 |
| Msa0227500 | Msa0850500 | 0.840274 | 9.596120e-58 | -8.615850e-47 |
| Msa0227510 | Msa0850500 | 0.801388 | 9.219359e-49 | -8.615850e-47 |
| Msa0233340 | Msa0850500 | 0.818010 | 2.450451e-52 | -8.615850e-47 |
| Msa0235890 | Msa0850500 | 0.847874 | 8.771304e-60 | -8.615850e-47 |
| Msa0369570 | Msa0850500 | 0.826215 | 3.064790e-54 | -8.615850e-47 |
| Msa0370600 | Msa0850500 | 0.830413 | 2.978739e-55 | -8.615850e-47 |
| Msa0371540 | Msa0850500 | 0.816117 | 6.524420e-52 | -8.615850e-47 |
| Msa0376510 | Msa0850500 | 0.804498 | 2.098411e-49 | -8.615850e-47 |
| Msa0378340 | Msa0850500 | 0.837001 | 6.722116e-57 | -8.615850e-47 |
| Msa0380920 | Msa0850500 | 0.804838 | 1.782772e-49 | -8.615850e-47 |
| Msa0382560 | Msa0850500 | 0.838261 | 3.194440e-57 | -8.615850e-47 |
| Msa0413930 | Msa0850500 | 0.829561 | 4.804580e-55 | -8.615850e-47 |
| Msa0418200 | Msa0850500 | 0.844421 | 7.640522e-59 | -8.615850e-47 |
| Msa0418220 | Msa0850500 | 0.829225 | 5.800023e-55 | -8.615850e-47 |
| Msa0420540 | Msa0850500 | 0.823166 | 1.603378e-53 | -8.615850e-47 |
| Msa0423360 | Msa0850500 | -0.827687 | 1.363669e-54 | -8.615850e-47 |
| Msa0426330 | Msa0850500 | 0.848702 | 5.178604e-60 | -8.615850e-47 |
| Msa0427690 | Msa0850500 | 0.836987 | 6.780583e-57 | -8.615850e-47 |
| Msa0430820 | Msa0850500 | 0.818370 | 2.030627e-52 | -8.615850e-47 |
| Msa0436460 | Msa0850500 | 0.845305 | 4.411458e-59 | -8.615850e-47 |
| Msa0436500 | Msa0850500 | 0.841044 | 6.031059e-58 | -8.615850e-47 |
| Msa0444010 | Msa0850500 | 0.825067 | 5.736009e-54 | -8.615850e-47 |
| Msa0458950 | Msa0850500 | 0.821953 | 3.069387e-53 | -8.615850e-47 |
| Msa0464540 | Msa0850500 | 0.821096 | 4.840787e-53 | -8.615850e-47 |
| Msa0464630 | Msa0850500 | 0.832072 | 1.164425e-55 | -8.615850e-47 |
| Msa0466060 | Msa0850500 | 0.802710 | 4.931354e-49 | -8.615850e-47 |
| Msa0469910 | Msa0850500 | -0.806307 | 8.764451e-50 | -8.615850e-47 |
| Msa0480320 | Msa0850500 | 0.810747 | 9.883672e-51 | -8.615850e-47 |
| Msa0243690 | Msa0850500 | 0.808881 | 2.491188e-50 | -8.615850e-47 |
| Msa0246280 | Msa0850500 | 0.822464 | 2.335790e-53 | -8.615850e-47 |
| Msa0248560 | Msa0850500 | 0.800233 | 1.586610e-48 | -8.615850e-47 |
| Msa0252180 | Msa0850500 | 0.812502 | 4.105740e-51 | -8.615850e-47 |
| Msa0259560 | Msa0850500 | 0.808485 | 3.026164e-50 | -8.615850e-47 |
| Msa0260970 | Msa0850500 | 0.808396 | 3.161620e-50 | -8.615850e-47 |
| Msa0263620 | Msa0850500 | 0.819339 | 1.223352e-52 | -8.615850e-47 |
| Msa0267760 | Msa0850500 | 0.804661 | 1.940845e-49 | -8.615850e-47 |
| Msa0270220 | Msa0850500 | -0.818924 | 1.520173e-52 | -8.615850e-47 |
| Msa0281570 | Msa0850500 | 0.822552 | 2.228452e-53 | -8.615850e-47 |
| Msa0288200 | Msa0850500 | 0.803393 | 3.561855e-49 | -8.615850e-47 |
| Msa0291040 | Msa0850500 | 0.807388 | 5.178670e-50 | -8.615850e-47 |
| Msa0295520 | Msa0850500 | 0.822008 | 2.980144e-53 | -8.615850e-47 |
| Msa0296760 | Msa0850500 | 0.821731 | 3.454677e-53 | -8.615850e-47 |
| Msa0297920 | Msa0850500 | 0.832562 | 8.805497e-56 | -8.615850e-47 |
| Msa0298240 | Msa0850500 | 0.814110 | 1.820669e-51 | -8.615850e-47 |
| Msa0298970 | Msa0850500 | 0.801629 | 8.227263e-49 | -8.615850e-47 |
| Msa0301180 | Msa0850500 | 0.842628 | 2.302604e-58 | -8.615850e-47 |
| Msa0307830 | Msa0850500 | -0.815466 | 9.114573e-52 | -8.615850e-47 |
| Msa0311690 | Msa0850500 | 0.819065 | 1.412586e-52 | -8.615850e-47 |
| Msa0315480 | Msa0850500 | 0.803251 | 3.810328e-49 | -8.615850e-47 |
| Msa0320540 | Msa0850500 | 0.837382 | 5.371016e-57 | -8.615850e-47 |
| Msa0326540 | Msa0850500 | 0.809282 | 2.043358e-50 | -8.615850e-47 |
| Msa0331780 | Msa0850500 | 0.847181 | 1.359978e-59 | -8.615850e-47 |
| Msa0331910 | Msa0850500 | 0.800340 | 1.508850e-48 | -8.615850e-47 |
| Msa0337850 | Msa0850500 | 0.809561 | 1.780669e-50 | -8.615850e-47 |
| Msa0342200 | Msa0850500 | 0.805202 | 1.496065e-49 | -8.615850e-47 |
| Msa0344070 | Msa0850500 | 0.824601 | 7.390799e-54 | -8.615850e-47 |
| Msa0484690 | Msa0850500 | 0.814324 | 1.632437e-51 | -8.615850e-47 |
| Msa0508400 | Msa0850500 | 0.804859 | 1.764738e-49 | -8.615850e-47 |
| Msa0508610 | Msa0850500 | 0.802940 | 4.419007e-49 | -8.615850e-47 |
| Msa0510440 | Msa0850500 | 0.840482 | 8.468752e-58 | -8.615850e-47 |
| Msa0511720 | Msa0850500 | -0.816328 | 5.853490e-52 | -8.615850e-47 |
| Msa0517340 | Msa0850500 | 0.811812 | 5.806106e-51 | -8.615850e-47 |
| Msa0518520 | Msa0850500 | 0.836541 | 8.809428e-57 | -8.615850e-47 |
| Msa0519200 | Msa0850500 | 0.809597 | 1.749202e-50 | -8.615850e-47 |
| Msa0524050 | Msa0850500 | 0.800665 | 1.295323e-48 | -8.615850e-47 |
| Msa0524090 | Msa0850500 | 0.815881 | 7.366908e-52 | -8.615850e-47 |
| Msa0524120 | Msa0850500 | 0.831856 | 1.316647e-55 | -8.615850e-47 |
| Msa0525240 | Msa0850500 | 0.839104 | 1.934136e-57 | -8.615850e-47 |
| Msa0526750 | Msa0850500 | 0.809204 | 2.124251e-50 | -8.615850e-47 |
| Msa0526890 | Msa0850500 | 0.811180 | 7.965778e-51 | -8.615850e-47 |
| Msa0527590 | Msa0850500 | 0.821317 | 4.305520e-53 | -8.615850e-47 |
| Msa0532300 | Msa0850500 | 0.804192 | 2.430970e-49 | -8.615850e-47 |
| Msa0534590 | Msa0850500 | 0.821832 | 3.274189e-53 | -8.615850e-47 |
| Msa0535030 | Msa0850500 | 0.800108 | 1.682242e-48 | -8.615850e-47 |
| Msa0538570 | Msa0850500 | 0.813456 | 2.535922e-51 | -8.615850e-47 |
| Msa0543850 | Msa0850500 | 0.815629 | 8.382542e-52 | -8.615850e-47 |
| Msa0546380 | Msa0850500 | 0.829674 | 4.509342e-55 | -8.615850e-47 |
| Msa0546740 | Msa0850500 | 0.815295 | 9.945878e-52 | -8.615850e-47 |
| Msa0547050 | Msa0850500 | 0.809432 | 1.897519e-50 | -8.615850e-47 |
| Msa0557630 | Msa0850500 | 0.835901 | 1.281436e-56 | -8.615850e-47 |
| Msa0558880 | Msa0850500 | 0.819308 | 1.243588e-52 | -8.615850e-47 |
| Msa0568450 | Msa0850500 | 0.804472 | 2.125468e-49 | -8.615850e-47 |
| Msa0575250 | Msa0850500 | 0.822825 | 1.925405e-53 | -8.615850e-47 |
| Msa0576420 | Msa0850500 | 0.818049 | 2.400881e-52 | -8.615850e-47 |
| Msa0581340 | Msa0850500 | 0.803071 | 4.152011e-49 | -8.615850e-47 |
| Msa0585730 | Msa0850500 | 0.813245 | 2.821906e-51 | -8.615850e-47 |
| Msa0590800 | Msa0850500 | 0.831450 | 1.657700e-55 | -8.615850e-47 |
| Msa0591770 | Msa0850500 | 0.814674 | 1.365894e-51 | -8.615850e-47 |
| Msa0594390 | Msa0850500 | 0.810124 | 1.346935e-50 | -8.615850e-47 |
| Msa0600390 | Msa0850500 | 0.826051 | 3.353455e-54 | -8.615850e-47 |
| Msa0843290 | Msa0850500 | 0.805435 | 1.337092e-49 | -8.615850e-47 |
| Msa0850500 | Msa0853320 | 0.821521 | 3.862626e-53 | -8.615850e-47 |
| Msa0850500 | Msa0862100 | 0.861488 | 9.903827e-64 | -8.615850e-47 |
| Msa0850500 | Msa0863760 | 0.804041 | 2.613435e-49 | -8.615850e-47 |
| Msa0850500 | Msa0870620 | 0.809963 | 1.458998e-50 | -8.615850e-47 |
| Msa0850500 | Msa0870690 | 0.817124 | 3.881075e-52 | -8.615850e-47 |
| Msa0850500 | Msa0872310 | 0.827592 | 1.436630e-54 | -8.615850e-47 |
| Msa0850500 | Msa0873190 | 0.826482 | 2.648229e-54 | -8.615850e-47 |
| Msa0850500 | Msa0880710 | 0.852241 | 5.253627e-61 | -8.615850e-47 |
| Msa0850500 | Msa0885060 | 0.841755 | 3.920324e-58 | -8.615850e-47 |
| Msa0850500 | Msa0886980 | 0.829447 | 5.120569e-55 | -8.615850e-47 |
| Msa0850500 | Msa0890250 | 0.831247 | 1.859634e-55 | -8.615850e-47 |
| Msa0850500 | Msa0903730 | 0.811549 | 6.621188e-51 | -8.615850e-47 |
| Msa0850500 | Msa0905550 | 0.863991 | 1.676041e-64 | -8.615850e-47 |
| Msa0850500 | Msa0906370 | 0.805996 | 1.019422e-49 | -8.615850e-47 |
| Msa0850500 | Msa0907700 | 0.819268 | 1.269696e-52 | -8.615850e-47 |
| Msa0850500 | Msa0922540 | 0.806503 | 7.971166e-50 | -8.615850e-47 |
| Msa0850500 | Msa0925160 | 0.821257 | 4.446018e-53 | -8.615850e-47 |
| Msa0850500 | Msa0930330 | 0.839823 | 1.258192e-57 | -8.615850e-47 |
| Msa0850500 | Msa0931480 | 0.810506 | 1.114154e-50 | -8.615850e-47 |
| Msa0850500 | Msa0931610 | 0.844176 | 8.890617e-59 | -8.615850e-47 |
| Msa0850500 | Msa0937550 | 0.844073 | 9.471874e-59 | -8.615850e-47 |
| Msa0850500 | Msa0938430 | 0.812895 | 3.367774e-51 | -8.615850e-47 |
| Msa0850500 | Msa0944710 | 0.805349 | 1.393627e-49 | -8.615850e-47 |
| Msa0850500 | Msa0946320 | 0.829166 | 5.992381e-55 | -8.615850e-47 |
| Msa0850500 | Msa0951460 | 0.803147 | 4.005704e-49 | -8.615850e-47 |
| Msa0850500 | Msa0951710 | 0.855643 | 5.496724e-62 | -8.615850e-47 |
| Msa0850500 | Msa0955260 | 0.806249 | 9.014224e-50 | -8.615850e-47 |
| Msa0850500 | Msa0958020 | 0.832628 | 8.480154e-56 | -8.615850e-47 |
| Msa0850500 | Msa0974750 | 0.841188 | 5.528227e-58 | -8.615850e-47 |
| Msa0850500 | Msa0975580 | 0.827611 | 1.422223e-54 | -8.615850e-47 |
| Msa0850500 | Msa0978000 | 0.811767 | 5.938957e-51 | -8.615850e-47 |
| Msa0850500 | Msa0979550 | 0.806075 | 9.809163e-50 | -8.615850e-47 |
| Msa0850500 | Msa0981000 | 0.800184 | 1.623485e-48 | -8.615850e-47 |
| Msa0850500 | Msa0988480 | 0.850191 | 1.991892e-60 | -8.615850e-47 |
| Msa0850500 | Msa0990520 | 0.843092 | 1.733339e-58 | -8.615850e-47 |
| Msa0850500 | Msa1002040 | 0.845906 | 3.032404e-59 | -8.615850e-47 |
| Msa0850500 | Msa1004500 | 0.816216 | 6.200344e-52 | -8.615850e-47 |
| Msa0850500 | Msa1007350 | 0.814116 | 1.814402e-51 | -8.615850e-47 |
| Msa0850500 | Msa1009000 | 0.812787 | 3.555698e-51 | -8.615850e-47 |
| Msa0850500 | Msa1014270 | 0.811029 | 8.586247e-51 | -8.615850e-47 |
| Msa0850500 | Msa1018790 | 0.838895 | 2.190972e-57 | -8.615850e-47 |
| Msa0850500 | Msa1023200 | 0.801498 | 8.751990e-49 | -8.615850e-47 |
| Msa0850500 | Msa1024140 | 0.809035 | 2.308064e-50 | -8.615850e-47 |
| Msa0850500 | Msa1030280 | 0.806915 | 6.524415e-50 | -8.615850e-47 |
| Msa0850500 | Msa1032450 | 0.801267 | 9.758532e-49 | -8.615850e-47 |
| Msa0850500 | Msa1033560 | 0.879258 | 1.442733e-69 | -8.615850e-47 |
| Msa0850500 | Msa1038320 | 0.803864 | 2.843553e-49 | -8.615850e-47 |
| Msa0850500 | Msa1040890 | 0.803830 | 2.891082e-49 | -8.615850e-47 |
| Msa0850500 | Msa1041530 | 0.813790 | 2.141973e-51 | -8.615850e-47 |
| Msa0850500 | Msa1042670 | 0.807397 | 5.155646e-50 | -8.615850e-47 |
| Msa0850500 | Msa1044040 | 0.805014 | 1.637281e-49 | -8.615850e-47 |
| Msa0850500 | Msa1044340 | 0.830036 | 3.681736e-55 | -8.615850e-47 |
| Msa0850500 | Msa1045970 | 0.802283 | 6.039106e-49 | -8.615850e-47 |
| Msa0850500 | Msa1046870 | 0.811778 | 5.903742e-51 | -8.615850e-47 |
| Msa0850500 | Msa1055260 | 0.817593 | 3.043003e-52 | -8.615850e-47 |
| Msa0850500 | Msa1055280 | 0.823620 | 1.255694e-53 | -8.615850e-47 |
| Msa0850500 | Msa1055500 | 0.849732 | 2.676305e-60 | -8.615850e-47 |
| Msa0850500 | Msa1061500 | 0.831097 | 2.024782e-55 | -8.615850e-47 |
| Msa0850500 | Msa1061920 | 0.832136 | 1.123031e-55 | -8.615850e-47 |
| Msa0850500 | Msa1069300 | 0.802099 | 6.587511e-49 | -8.615850e-47 |
| Msa0850500 | Msa1072350 | 0.805033 | 1.622999e-49 | -8.615850e-47 |
| Msa0850500 | Msa1073340 | 0.810883 | 9.237941e-51 | -8.615850e-47 |
| Msa0850500 | Msa1073350 | 0.873365 | 1.555667e-67 | -8.615850e-47 |
| Msa0850500 | Msa1081570 | 0.807641 | 4.576764e-50 | -8.615850e-47 |
| Msa0850500 | Msa1095470 | 0.814169 | 1.766934e-51 | -8.615850e-47 |
| Msa0850500 | Msa1106810 | 0.850132 | 2.069250e-60 | -8.615850e-47 |
| Msa0850500 | Msa1107440 | 0.849744 | 2.656556e-60 | -8.615850e-47 |
| Msa0850500 | Msa1107970 | 0.807797 | 4.240787e-50 | -8.615850e-47 |
| Msa0850500 | Msa1112610 | 0.805616 | 1.224915e-49 | -8.615850e-47 |
| Msa0850500 | Msa1113850 | 0.869029 | 4.203546e-66 | -8.615850e-47 |
| Msa0850500 | Msa1116930 | 0.818293 | 2.114338e-52 | -8.615850e-47 |
| Msa0850500 | Msa1118140 | 0.806866 | 6.680989e-50 | -8.615850e-47 |
| Msa0850500 | Msa1120540 | 0.801100 | 1.056007e-48 | -8.615850e-47 |
| Msa0850500 | Msa1127140 | 0.809942 | 1.474322e-50 | -8.615850e-47 |
| Msa0850500 | Msa1130210 | -0.818161 | 2.264113e-52 | -8.615850e-47 |
| Msa0850500 | Msa1136230 | 0.823957 | 1.047129e-53 | -8.615850e-47 |
| Msa0850500 | Msa1139810 | 0.815875 | 7.386869e-52 | -8.615850e-47 |
| Msa0850500 | Msa1147270 | 0.805944 | 1.045388e-49 | -8.615850e-47 |
| Msa0850500 | Msa1149760 | 0.801681 | 8.026608e-49 | -8.615850e-47 |
| Msa0850500 | Msa1150230 | 0.809275 | 2.050462e-50 | -8.615850e-47 |
| Msa0850500 | Msa1150970 | 0.868308 | 7.191507e-66 | -8.615850e-47 |
| Msa0850500 | Msa1157160 | 0.804249 | 2.365118e-49 | -8.615850e-47 |
| Msa0850500 | Msa1159100 | 0.821797 | 3.335008e-53 | -8.615850e-47 |
| Msa0850500 | Msa1159360 | 0.851889 | 6.612742e-61 | -8.615850e-47 |
| Msa0850500 | Msa1160400 | 0.883496 | 4.270261e-71 | -8.615850e-47 |
| Msa0850500 | Msa1169990 | 0.800201 | 1.610228e-48 | -8.615850e-47 |
| Msa0850500 | Msa1172590 | 0.836265 | 1.035672e-56 | -8.615850e-47 |
| Msa0850500 | Msa1200920 | 0.813757 | 2.177130e-51 | -8.615850e-47 |
| Msa0850500 | Msa1201990 | 0.801429 | 9.044313e-49 | -8.615850e-47 |
| Msa0850500 | Msa1204120 | 0.806091 | 9.731870e-50 | -8.615850e-47 |
| Msa0850500 | Msa1210770 | 0.802120 | 6.521677e-49 | -8.615850e-47 |
| Msa0850500 | Msa1211090 | 0.803402 | 3.545741e-49 | -8.615850e-47 |
| Msa0850500 | Msa1213060 | 0.844409 | 7.694694e-59 | -8.615850e-47 |
| Msa0850500 | Msa1217860 | 0.808039 | 3.766144e-50 | -8.615850e-47 |
| Msa0850500 | Msa1218480 | 0.851206 | 1.032301e-60 | -8.615850e-47 |
| Msa0850500 | Msa1220230 | 0.815337 | 9.736538e-52 | -8.615850e-47 |
| Msa0850500 | Msa1220450 | -0.804083 | 2.561386e-49 | -8.615850e-47 |
| Msa0850500 | Msa1220460 | -0.804080 | 2.564672e-49 | -8.615850e-47 |
| Msa0850500 | Msa1220480 | -0.803622 | 3.192484e-49 | -8.615850e-47 |
| Msa0850500 | Msa1221260 | 0.801084 | 1.064074e-48 | -8.615850e-47 |
| Msa0850500 | Msa1221560 | 0.830087 | 3.577738e-55 | -8.615850e-47 |
| Msa0850500 | Msa1223160 | -0.808351 | 3.231830e-50 | -8.615850e-47 |
| Msa0850500 | Msa1224670 | 0.800452 | 1.431630e-48 | -8.615850e-47 |
| Msa0850500 | Msa1228610 | 0.809698 | 1.664086e-50 | -8.615850e-47 |
| Msa0850500 | Msa1237030 | 0.833424 | 5.376688e-56 | -8.615850e-47 |
| Msa0850500 | Msa1238480 | 0.804547 | 2.049963e-49 | -8.615850e-47 |
| Msa0850500 | Msa1249870 | 0.828367 | 9.354287e-55 | -8.615850e-47 |
| Msa0850500 | Msa1254190 | 0.846033 | 2.800154e-59 | -8.615850e-47 |
| Msa0850500 | Msa1254770 | 0.823864 | 1.100911e-53 | -8.615850e-47 |
| Msa0850500 | Msa1254800 | 0.820512 | 6.596393e-53 | -8.615850e-47 |
| Msa0850500 | Msa1258810 | 0.805926 | 1.054286e-49 | -8.615850e-47 |
| Msa0850500 | Msa1263030 | 0.813622 | 2.331436e-51 | -8.615850e-47 |
| Msa0850500 | Msa1265960 | 0.829551 | 4.832605e-55 | -8.615850e-47 |
| Msa0850500 | Msa1280130 | 0.802266 | 6.086995e-49 | -8.615850e-47 |
| Msa0850500 | Msa1281720 | 0.818858 | 1.573905e-52 | -8.615850e-47 |
| Msa0850500 | Msa1284030 | 0.810045 | 1.400839e-50 | -8.615850e-47 |
| Msa0850500 | Msa1308950 | 0.801557 | 8.514145e-49 | -8.615850e-47 |
| Msa0850500 | Msa1316170 | 0.801378 | 9.262516e-49 | -8.615850e-47 |
| Msa0850500 | Msa1321000 | 0.840289 | 9.511569e-58 | -8.615850e-47 |
| Msa0850500 | Msa1323060 | 0.836565 | 8.686791e-57 | -8.615850e-47 |
| Msa0850500 | Msa1327820 | 0.805096 | 1.574212e-49 | -8.615850e-47 |
| Msa0850500 | Msa1337340 | 0.800718 | 1.263420e-48 | -8.615850e-47 |
| Msa0850500 | Msa1341930 | 0.811763 | 5.949019e-51 | -8.615850e-47 |
| Msa0850500 | Msa1352290 | 0.813209 | 2.874261e-51 | -8.615850e-47 |
| Msa0850500 | Msa1354040 | 0.832118 | 1.134595e-55 | -8.615850e-47 |
| Msa0850500 | Msa1355400 | 0.838363 | 3.006991e-57 | -8.615850e-47 |
| Msa0850500 | Msa1362510 | 0.814960 | 1.180579e-51 | -8.615850e-47 |
| Msa0850500 | Msa1365200 | 0.836993 | 6.756889e-57 | -8.615850e-47 |
| Msa0850500 | Msa1367940 | 0.821852 | 3.238678e-53 | -8.615850e-47 |
| Msa0850500 | Msa1373510 | 0.804598 | 2.000475e-49 | -8.615850e-47 |
| Msa0850500 | Msa1374440 | 0.811683 | 6.191572e-51 | -8.615850e-47 |
| Msa0850500 | Msa1379990 | 0.864162 | 1.482798e-64 | -8.615850e-47 |
| Msa0850500 | Msa1381130 | 0.819988 | 8.699032e-53 | -8.615850e-47 |
| Msa0850500 | Msa1382720 | 0.827642 | 1.397390e-54 | -8.615850e-47 |
| Msa0850500 | Msa1390310 | 0.811972 | 5.357745e-51 | -8.615850e-47 |
| Msa0850500 | Msa1403580 | -0.820557 | 6.439413e-53 | -8.615850e-47 |
| Msa0850500 | Msa1405180 | 0.820586 | 6.344387e-53 | -8.615850e-47 |
| Msa0850500 | Msa1420060 | 0.863472 | 2.429545e-64 | -8.615850e-47 |
| Msa0850500 | Msa1422270 | 0.807226 | 5.605302e-50 | -8.615850e-47 |
| Msa0850500 | Msa1428290 | 0.816793 | 4.603226e-52 | -8.615850e-47 |
| Msa0850500 | Msa1429420 | 0.848582 | 5.592763e-60 | -8.615850e-47 |
| Msa0850500 | Msa1429830 | 0.826731 | 2.309577e-54 | -8.615850e-47 |
| Msa0850500 | Msa1431000 | 0.834943 | 2.237566e-56 | -8.615850e-47 |
| Msa0850500 | Msa1435040 | 0.805200 | 1.497487e-49 | -8.615850e-47 |
| Msa0850500 | Msa1435670 | 0.844088 | 9.387487e-59 | -8.615850e-47 |
| Msa0850500 | Msa1439670 | 0.816458 | 5.473635e-52 | -8.615850e-47 |
| Msa0850500 | Msa1439960 | 0.810722 | 1.000841e-50 | -8.615850e-47 |
| Msa0850500 | Msa1440340 | 0.850690 | 1.442281e-60 | -8.615850e-47 |
| Msa0850500 | Msa1443290 | -0.816941 | 4.266022e-52 | -8.615850e-47 |
| Msa0850500 | Msa1444450 | 0.810169 | 1.317419e-50 | -8.615850e-47 |
| Msa0850500 | Msa1445790 | 0.808564 | 2.910943e-50 | -8.615850e-47 |
| Msa0850500 | Msa1449880 | 0.805687 | 1.183336e-49 | -8.615850e-47 |
| Msa0850500 | Msa1455620 | 0.836535 | 8.838299e-57 | -8.615850e-47 |
| Msa0850500 | Msa1460010 | 0.802745 | 4.848022e-49 | -8.615850e-47 |
| Msa0850500 | Msa1464560 | 0.836649 | 8.269616e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850500 | MtrunA17_Chr5g0425991 | 91.324 | 219 | 13 | 1 | 1 | 219 | 1 | 213 | 1.20e-140 | 392 |
| Msa0850500 | MtrunA17_Chr3g0115791 | 58.333 | 168 | 47 | 9 | 64 | 218 | 2 | 159 | 9.20e-48 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850500 | AT1G78170.1 | 36.522 | 230 | 109 | 10 | 1 | 211 | 1 | 212 | 1.50e-25 | 99.8 |
| Msa0850500 | AT4G08910.1 | 39.286 | 112 | 52 | 2 | 108 | 203 | 86 | 197 | 2.33e-17 | 77.8 |
| Msa0850500 | AT1G22250.1 | 42.609 | 115 | 59 | 2 | 111 | 218 | 85 | 199 | 2.56e-17 | 77.4 |
Find 39 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCACATAGACTTATTTAT+TGG | 0.127321 | 5_4:-39777568 | None:intergenic |
| TTCTGATCAAGAATTCTTTA+AGG | 0.147055 | 5_4:+39776765 | Msa0850500:CDS |
| CACCTTTGCCTTCAGATAAA+TGG | 0.203598 | 5_4:+39776848 | Msa0850500:CDS |
| TTAAGAACATACATAAATTT+AGG | 0.233603 | 5_4:-39777776 | None:intergenic |
| CTTCACAAAAGAAGAGAAAA+TGG | 0.266395 | 5_4:+39776728 | Msa0850500:CDS |
| GCGAAGTTCTATATCAAATA+TGG | 0.295622 | 5_4:-39776818 | None:intergenic |
| AAACCACTCTTGTTTGAATA+TGG | 0.302002 | 5_4:+39776645 | Msa0850500:exon |
| TATTATATATTTAAAACAAA+AGG | 0.330628 | 5_4:+39777614 | Msa0850500:three_prime_UTR |
| CAAGAACAACCACTTCTAAT+TGG | 0.345178 | 5_4:+39777544 | Msa0850500:three_prime_UTR |
| ATACATAAATATGATGATTA+TGG | 0.348413 | 5_4:-39777728 | None:intergenic |
| ATCTATTAGCAAGAATAAAA+AGG | 0.355406 | 5_4:+39777299 | Msa0850500:CDS |
| AAGGATCTTACACATGATCT+AGG | 0.356603 | 5_4:+39776784 | Msa0850500:CDS |
| GGATGCATGAATTTGCAATT+AGG | 0.374086 | 5_4:-39777459 | None:intergenic |
| CAAATTATACAACTCCTTAG+AGG | 0.387146 | 5_4:-39777658 | None:intergenic |
| ATTATATATTTAAAACAAAA+GGG | 0.432410 | 5_4:+39777615 | Msa0850500:three_prime_UTR |
| TTAATCTACCTCTACCTCTA+AGG | 0.434008 | 5_4:+39777644 | Msa0850500:three_prime_UTR |
| GTATGTTTCTTAATGCTGTA+AGG | 0.449888 | 5_4:+39777806 | Msa0850500:three_prime_UTR |
| GCAACAATACCTCACAGTTC+AGG | 0.455526 | 5_4:+39776870 | Msa0850500:CDS |
| AATTTGGAAGGGTTCTGATC+TGG | 0.466878 | 5_4:-39777486 | None:intergenic |
| GAAGGGTTCTGATCTGGTGG+TGG | 0.491999 | 5_4:-39777480 | None:intergenic |
| AAGAATTCTTGATCAGAAAG+TGG | 0.498028 | 5_4:-39776760 | None:intergenic |
| AAGGAGTTGTATAATTTGAC+TGG | 0.504963 | 5_4:+39777663 | Msa0850500:three_prime_UTR |
| TAAGTACTACTAATTCATCA+TGG | 0.522676 | 5_4:+39777334 | Msa0850500:CDS |
| TTCACAAAAGAAGAGAAAAT+GGG | 0.522716 | 5_4:+39776729 | Msa0850500:CDS |
| ATACAACTCCTTAGAGGTAG+AGG | 0.527574 | 5_4:-39777652 | None:intergenic |
| TATTGTTGCCATTTATCTGA+AGG | 0.533510 | 5_4:-39776856 | None:intergenic |
| AGGATCTTACACATGATCTA+GGG | 0.553583 | 5_4:+39776785 | Msa0850500:CDS |
| TGTGAAGCATCAAAATCTGT+AGG | 0.557840 | 5_4:-39776712 | None:intergenic |
| CACATGTCAAATTAAGCTCA+AGG | 0.558418 | 5_4:-39777218 | None:intergenic |
| AATTTGCAATTAGGACAAGA+AGG | 0.564845 | 5_4:-39777450 | None:intergenic |
| TTTATTGGACCAATTAGAAG+TGG | 0.571145 | 5_4:-39777553 | None:intergenic |
| TTGGAAGGGTTCTGATCTGG+TGG | 0.597114 | 5_4:-39777483 | None:intergenic |
| TGCCATTTATCTGAAGGCAA+AGG | 0.597180 | 5_4:-39776850 | None:intergenic |
| TGGTTATCATCATCATCAGA+TGG | 0.614533 | 5_4:+39777354 | Msa0850500:CDS |
| TATTTATGTATATATAAGAG+TGG | 0.623638 | 5_4:+39777740 | Msa0850500:three_prime_UTR |
| AGACCATATTCAAACAAGAG+TGG | 0.639805 | 5_4:-39776648 | None:intergenic |
| TATGATGATTATGGTACACA+AGG | 0.666866 | 5_4:-39777719 | None:intergenic |
| TTGTATGAAGTGTCACATGT+TGG | 0.683627 | 5_4:+39777407 | Msa0850500:CDS |
| TATTATATACCTGAACTGTG+AGG | 0.723748 | 5_4:-39776879 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATATATTAACCT+CGG | - | chr5_4:39776958-39776977 | None:intergenic | 10.0% |
| !! | AAAATAAAATATATTAACCT+CGG | - | chr5_4:39776958-39776977 | None:intergenic | 10.0% |
| !!! | GAGGTTAATATATTTTATTT+TGG | + | chr5_4:39776957-39776976 | Msa0850500:intron | 15.0% |
| !! | TTATAATATTATTGCTACAT+CGG | - | chr5_4:39777004-39777023 | None:intergenic | 15.0% |
| !! | ATACATAAATATGATGATTA+TGG | - | chr5_4:39777731-39777750 | None:intergenic | 15.0% |
| !! | TATTTATGTATATATAAGAG+TGG | + | chr5_4:39777740-39777759 | Msa0850500:three_prime_UTR | 15.0% |
| !! | TTAAGAACATACATAAATTT+AGG | - | chr5_4:39777779-39777798 | None:intergenic | 15.0% |
| !!! | GAGGTTAATATATTTTATTT+TGG | + | chr5_4:39776957-39776976 | Msa0850500:intron | 15.0% |
| !! | TTATAATATTATTGCTACAT+CGG | - | chr5_4:39777004-39777023 | None:intergenic | 15.0% |
| !! | ATACATAAATATGATGATTA+TGG | - | chr5_4:39777731-39777750 | None:intergenic | 15.0% |
| !! | TATTTATGTATATATAAGAG+TGG | + | chr5_4:39777740-39777759 | Msa0850500:three_prime_UTR | 15.0% |
| !! | TTAAGAACATACATAAATTT+AGG | - | chr5_4:39777779-39777798 | None:intergenic | 15.0% |
| !! | ATCTATTAGCAAGAATAAAA+AGG | + | chr5_4:39777299-39777318 | Msa0850500:CDS | 20.0% |
| !! | AATCACATAGACTTATTTAT+TGG | - | chr5_4:39777571-39777590 | None:intergenic | 20.0% |
| !! | ATCTATTAGCAAGAATAAAA+AGG | + | chr5_4:39777299-39777318 | Msa0850500:CDS | 20.0% |
| !! | AATCACATAGACTTATTTAT+TGG | - | chr5_4:39777571-39777590 | None:intergenic | 20.0% |
| ! | TTCACAAAAGAAGAGAAAAT+GGG | + | chr5_4:39776729-39776748 | Msa0850500:CDS | 25.0% |
| ! | TTCTGATCAAGAATTCTTTA+AGG | + | chr5_4:39776765-39776784 | Msa0850500:CDS | 25.0% |
| ! | CGAAAATGTGCTTATAAAAA+GGG | - | chr5_4:39776914-39776933 | None:intergenic | 25.0% |
| ! | TAAGTACTACTAATTCATCA+TGG | + | chr5_4:39777334-39777353 | Msa0850500:CDS | 25.0% |
| ! | TTCTCTTCAAAAATTTGGAA+GGG | - | chr5_4:39777500-39777519 | None:intergenic | 25.0% |
| ! | TTCACAAAAGAAGAGAAAAT+GGG | + | chr5_4:39776729-39776748 | Msa0850500:CDS | 25.0% |
| ! | TTCTGATCAAGAATTCTTTA+AGG | + | chr5_4:39776765-39776784 | Msa0850500:CDS | 25.0% |
| ! | CGAAAATGTGCTTATAAAAA+GGG | - | chr5_4:39776914-39776933 | None:intergenic | 25.0% |
| ! | TAAGTACTACTAATTCATCA+TGG | + | chr5_4:39777334-39777353 | Msa0850500:CDS | 25.0% |
| ! | TTCTCTTCAAAAATTTGGAA+GGG | - | chr5_4:39777500-39777519 | None:intergenic | 25.0% |
| ! | AAACCACTCTTGTTTGAATA+TGG | + | chr5_4:39776645-39776664 | Msa0850500:exon | 30.0% |
| CTTCACAAAAGAAGAGAAAA+TGG | + | chr5_4:39776728-39776747 | Msa0850500:CDS | 30.0% | |
| AAGAATTCTTGATCAGAAAG+TGG | - | chr5_4:39776763-39776782 | None:intergenic | 30.0% | |
| GCGAAGTTCTATATCAAATA+TGG | - | chr5_4:39776821-39776840 | None:intergenic | 30.0% | |
| ! | TATTGTTGCCATTTATCTGA+AGG | - | chr5_4:39776859-39776878 | None:intergenic | 30.0% |
| TATTATATACCTGAACTGTG+AGG | - | chr5_4:39776882-39776901 | None:intergenic | 30.0% | |
| GCGAAAATGTGCTTATAAAA+AGG | - | chr5_4:39776915-39776934 | None:intergenic | 30.0% | |
| ! | TTAAATTTTCTCATGCAGTC+AGG | + | chr5_4:39777093-39777112 | Msa0850500:intron | 30.0% |
| ! | TAAATTTTCTCATGCAGTCA+GGG | + | chr5_4:39777094-39777113 | Msa0850500:intron | 30.0% |
| !!! | GAGATGATTTTTCAGGTAAA+GGG | - | chr5_4:39777179-39777198 | None:intergenic | 30.0% |
| !!! | AGAGATGATTTTTCAGGTAA+AGG | - | chr5_4:39777180-39777199 | None:intergenic | 30.0% |
| TTACCTGAAAAATCATCTCT+AGG | + | chr5_4:39777180-39777199 | Msa0850500:CDS | 30.0% | |
| AATTTGCAATTAGGACAAGA+AGG | - | chr5_4:39777453-39777472 | None:intergenic | 30.0% | |
| GTTCTCTTCAAAAATTTGGA+AGG | - | chr5_4:39777501-39777520 | None:intergenic | 30.0% | |
| CCTTGTTCTCTTCAAAAATT+TGG | - | chr5_4:39777505-39777524 | None:intergenic | 30.0% | |
| !! | CCAAATTTTTGAAGAGAACA+AGG | + | chr5_4:39777502-39777521 | Msa0850500:CDS | 30.0% |
| TTTATTGGACCAATTAGAAG+TGG | - | chr5_4:39777556-39777575 | None:intergenic | 30.0% | |
| CAAATTATACAACTCCTTAG+AGG | - | chr5_4:39777661-39777680 | None:intergenic | 30.0% | |
| AAGGAGTTGTATAATTTGAC+TGG | + | chr5_4:39777663-39777682 | Msa0850500:three_prime_UTR | 30.0% | |
| TATGATGATTATGGTACACA+AGG | - | chr5_4:39777722-39777741 | None:intergenic | 30.0% | |
| GTATGTTTCTTAATGCTGTA+AGG | + | chr5_4:39777806-39777825 | Msa0850500:three_prime_UTR | 30.0% | |
| ! | TTTTCTCAACTCTTTCTTTC+TGG | - | chr5_4:39776628-39776647 | None:intergenic | 30.0% |
| ! | AAACCACTCTTGTTTGAATA+TGG | + | chr5_4:39776645-39776664 | Msa0850500:exon | 30.0% |
| CTTCACAAAAGAAGAGAAAA+TGG | + | chr5_4:39776728-39776747 | Msa0850500:CDS | 30.0% | |
| AAGAATTCTTGATCAGAAAG+TGG | - | chr5_4:39776763-39776782 | None:intergenic | 30.0% | |
| GCGAAGTTCTATATCAAATA+TGG | - | chr5_4:39776821-39776840 | None:intergenic | 30.0% | |
| ! | TATTGTTGCCATTTATCTGA+AGG | - | chr5_4:39776859-39776878 | None:intergenic | 30.0% |
| TATTATATACCTGAACTGTG+AGG | - | chr5_4:39776882-39776901 | None:intergenic | 30.0% | |
| GCGAAAATGTGCTTATAAAA+AGG | - | chr5_4:39776915-39776934 | None:intergenic | 30.0% | |
| ! | TTAAATTTTCTCATGCAGTC+AGG | + | chr5_4:39777093-39777112 | Msa0850500:intron | 30.0% |
| ! | TAAATTTTCTCATGCAGTCA+GGG | + | chr5_4:39777094-39777113 | Msa0850500:intron | 30.0% |
| !!! | GAGATGATTTTTCAGGTAAA+GGG | - | chr5_4:39777179-39777198 | None:intergenic | 30.0% |
| !!! | AGAGATGATTTTTCAGGTAA+AGG | - | chr5_4:39777180-39777199 | None:intergenic | 30.0% |
| TTACCTGAAAAATCATCTCT+AGG | + | chr5_4:39777180-39777199 | Msa0850500:CDS | 30.0% | |
| AATTTGCAATTAGGACAAGA+AGG | - | chr5_4:39777453-39777472 | None:intergenic | 30.0% | |
| GTTCTCTTCAAAAATTTGGA+AGG | - | chr5_4:39777501-39777520 | None:intergenic | 30.0% | |
| CCTTGTTCTCTTCAAAAATT+TGG | - | chr5_4:39777505-39777524 | None:intergenic | 30.0% | |
| !! | CCAAATTTTTGAAGAGAACA+AGG | + | chr5_4:39777502-39777521 | Msa0850500:CDS | 30.0% |
| TTTATTGGACCAATTAGAAG+TGG | - | chr5_4:39777556-39777575 | None:intergenic | 30.0% | |
| CAAATTATACAACTCCTTAG+AGG | - | chr5_4:39777661-39777680 | None:intergenic | 30.0% | |
| AAGGAGTTGTATAATTTGAC+TGG | + | chr5_4:39777663-39777682 | Msa0850500:three_prime_UTR | 30.0% | |
| TATGATGATTATGGTACACA+AGG | - | chr5_4:39777722-39777741 | None:intergenic | 30.0% | |
| GTATGTTTCTTAATGCTGTA+AGG | + | chr5_4:39777806-39777825 | Msa0850500:three_prime_UTR | 30.0% | |
| AGACCATATTCAAACAAGAG+TGG | - | chr5_4:39776651-39776670 | None:intergenic | 35.0% | |
| ACTAACCATGAGTCCAAAAA+AGG | + | chr5_4:39776684-39776703 | Msa0850500:CDS | 35.0% | |
| !!! | AGATTCCTTTTTTGGACTCA+TGG | - | chr5_4:39776692-39776711 | None:intergenic | 35.0% |
| !!! | TCTGTAGGAGATTCCTTTTT+TGG | - | chr5_4:39776700-39776719 | None:intergenic | 35.0% |
| ! | TGTGAAGCATCAAAATCTGT+AGG | - | chr5_4:39776715-39776734 | None:intergenic | 35.0% |
| AAGGATCTTACACATGATCT+AGG | + | chr5_4:39776784-39776803 | Msa0850500:CDS | 35.0% | |
| AGGATCTTACACATGATCTA+GGG | + | chr5_4:39776785-39776804 | Msa0850500:CDS | 35.0% | |
| !! | CTAGTTTTTAATTAGAGCCG+AGG | + | chr5_4:39776938-39776957 | Msa0850500:intron | 35.0% |
| ! | TGACCTAGAGATGATTTTTC+AGG | - | chr5_4:39777186-39777205 | None:intergenic | 35.0% |
| CACATGTCAAATTAAGCTCA+AGG | - | chr5_4:39777221-39777240 | None:intergenic | 35.0% | |
| TGGTTATCATCATCATCAGA+TGG | + | chr5_4:39777354-39777373 | Msa0850500:CDS | 35.0% | |
| ! | TTGTATGAAGTGTCACATGT+TGG | + | chr5_4:39777407-39777426 | Msa0850500:CDS | 35.0% |
| GGATGCATGAATTTGCAATT+AGG | - | chr5_4:39777462-39777481 | None:intergenic | 35.0% | |
| CAAGAACAACCACTTCTAAT+TGG | + | chr5_4:39777544-39777563 | Msa0850500:three_prime_UTR | 35.0% | |
| TTAATCTACCTCTACCTCTA+AGG | + | chr5_4:39777644-39777663 | Msa0850500:three_prime_UTR | 35.0% | |
| AGACCATATTCAAACAAGAG+TGG | - | chr5_4:39776651-39776670 | None:intergenic | 35.0% | |
| ACTAACCATGAGTCCAAAAA+AGG | + | chr5_4:39776684-39776703 | Msa0850500:CDS | 35.0% | |
| !!! | AGATTCCTTTTTTGGACTCA+TGG | - | chr5_4:39776692-39776711 | None:intergenic | 35.0% |
| !!! | TCTGTAGGAGATTCCTTTTT+TGG | - | chr5_4:39776700-39776719 | None:intergenic | 35.0% |
| ! | TGTGAAGCATCAAAATCTGT+AGG | - | chr5_4:39776715-39776734 | None:intergenic | 35.0% |
| AAGGATCTTACACATGATCT+AGG | + | chr5_4:39776784-39776803 | Msa0850500:CDS | 35.0% | |
| AGGATCTTACACATGATCTA+GGG | + | chr5_4:39776785-39776804 | Msa0850500:CDS | 35.0% | |
| !! | CTAGTTTTTAATTAGAGCCG+AGG | + | chr5_4:39776938-39776957 | Msa0850500:intron | 35.0% |
| ! | TGACCTAGAGATGATTTTTC+AGG | - | chr5_4:39777186-39777205 | None:intergenic | 35.0% |
| CACATGTCAAATTAAGCTCA+AGG | - | chr5_4:39777221-39777240 | None:intergenic | 35.0% | |
| TGGTTATCATCATCATCAGA+TGG | + | chr5_4:39777354-39777373 | Msa0850500:CDS | 35.0% | |
| ! | TTGTATGAAGTGTCACATGT+TGG | + | chr5_4:39777407-39777426 | Msa0850500:CDS | 35.0% |
| GGATGCATGAATTTGCAATT+AGG | - | chr5_4:39777462-39777481 | None:intergenic | 35.0% | |
| CAAGAACAACCACTTCTAAT+TGG | + | chr5_4:39777544-39777563 | Msa0850500:three_prime_UTR | 35.0% | |
| TTAATCTACCTCTACCTCTA+AGG | + | chr5_4:39777644-39777663 | Msa0850500:three_prime_UTR | 35.0% | |
| CACCTTTGCCTTCAGATAAA+TGG | + | chr5_4:39776848-39776867 | Msa0850500:CDS | 40.0% | |
| ! | TGCCATTTATCTGAAGGCAA+AGG | - | chr5_4:39776853-39776872 | None:intergenic | 40.0% |
| ! | AATTTGGAAGGGTTCTGATC+TGG | - | chr5_4:39777489-39777508 | None:intergenic | 40.0% |
| ATACAACTCCTTAGAGGTAG+AGG | - | chr5_4:39777655-39777674 | None:intergenic | 40.0% | |
| CACCTTTGCCTTCAGATAAA+TGG | + | chr5_4:39776848-39776867 | Msa0850500:CDS | 40.0% | |
| ! | TGCCATTTATCTGAAGGCAA+AGG | - | chr5_4:39776853-39776872 | None:intergenic | 40.0% |
| ! | AATTTGGAAGGGTTCTGATC+TGG | - | chr5_4:39777489-39777508 | None:intergenic | 40.0% |
| ATACAACTCCTTAGAGGTAG+AGG | - | chr5_4:39777655-39777674 | None:intergenic | 40.0% | |
| !!! | CTGAAGGCAAAGGTGTTTTG+AGG | - | chr5_4:39776843-39776862 | None:intergenic | 45.0% |
| GCAACAATACCTCACAGTTC+AGG | + | chr5_4:39776870-39776889 | Msa0850500:CDS | 45.0% | |
| !!! | CTGAAGGCAAAGGTGTTTTG+AGG | - | chr5_4:39776843-39776862 | None:intergenic | 45.0% |
| GCAACAATACCTCACAGTTC+AGG | + | chr5_4:39776870-39776889 | Msa0850500:CDS | 45.0% | |
| !!! | TATTATATATTTAAAACAAA+AGG | + | chr5_4:39777614-39777633 | Msa0850500:three_prime_UTR | 5.0% |
| !!! | ATTATATATTTAAAACAAAA+GGG | + | chr5_4:39777615-39777634 | Msa0850500:three_prime_UTR | 5.0% |
| !!! | TATTATATATTTAAAACAAA+AGG | + | chr5_4:39777614-39777633 | Msa0850500:three_prime_UTR | 5.0% |
| !!! | ATTATATATTTAAAACAAAA+GGG | + | chr5_4:39777615-39777634 | Msa0850500:three_prime_UTR | 5.0% |
| ! | TTGGAAGGGTTCTGATCTGG+TGG | - | chr5_4:39777486-39777505 | None:intergenic | 50.0% |
| ! | TTGGAAGGGTTCTGATCTGG+TGG | - | chr5_4:39777486-39777505 | None:intergenic | 50.0% |
| ! | GAAGGGTTCTGATCTGGTGG+TGG | - | chr5_4:39777483-39777502 | None:intergenic | 55.0% |
| ! | GAAGGGTTCTGATCTGGTGG+TGG | - | chr5_4:39777483-39777502 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 39776628 | 39777861 | 39776628 | ID=Msa0850500;Name=Msa0850500 |
| chr5_4 | mRNA | 39776628 | 39777861 | 39776628 | ID=Msa0850500-mRNA-1;Parent=Msa0850500;Name=Msa0850500-mRNA-1;_AED=0.02;_eAED=0.02;_QI=36|1|1|1|1|1|2|319|219 |
| chr5_4 | exon | 39776628 | 39776891 | 39776628 | ID=Msa0850500-mRNA-1:exon:12608;Parent=Msa0850500-mRNA-1 |
| chr5_4 | exon | 39777111 | 39777861 | 39777111 | ID=Msa0850500-mRNA-1:exon:12609;Parent=Msa0850500-mRNA-1 |
| chr5_4 | five_prime_UTR | 39776628 | 39776663 | 39776628 | ID=Msa0850500-mRNA-1:five_prime_utr;Parent=Msa0850500-mRNA-1 |
| chr5_4 | CDS | 39776664 | 39776891 | 39776664 | ID=Msa0850500-mRNA-1:cds;Parent=Msa0850500-mRNA-1 |
| chr5_4 | CDS | 39777111 | 39777542 | 39777111 | ID=Msa0850500-mRNA-1:cds;Parent=Msa0850500-mRNA-1 |
| chr5_4 | three_prime_UTR | 39777543 | 39777861 | 39777543 | ID=Msa0850500-mRNA-1:three_prime_utr;Parent=Msa0850500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
