Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024130 | RHN71890.1 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 8.51e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024130 | sp|Q9SJT8|SRS3_ARATH | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 3.13e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024130 | A0A396J239 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 4.07e-34 | 127 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1024130 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000200 | Msa1024130 | 0.920643 | 9.861241e-88 | -8.615850e-47 |
| Msa0006610 | Msa1024130 | 0.853836 | 1.835687e-61 | -8.615850e-47 |
| Msa0022690 | Msa1024130 | 0.952828 | 1.041398e-110 | -8.615850e-47 |
| Msa0033630 | Msa1024130 | 0.902734 | 7.160131e-79 | -8.615850e-47 |
| Msa1024130 | Msa1107960 | 0.983825 | 8.219516e-159 | -8.615850e-47 |
| Msa1024130 | Msa1140180 | 0.819955 | 8.848112e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024130 | MtrunA17_Chr2g0281741 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 7.83e-38 | 127 |
| Msa1024130 | MtrunA17_Chr4g0023901 | 96.364 | 55 | 2 | 0 | 1 | 55 | 1 | 55 | 1.30e-32 | 109 |
| Msa1024130 | MtrunA17_Chr4g0035591 | 86.792 | 53 | 7 | 0 | 68 | 120 | 9 | 61 | 8.24e-30 | 107 |
| Msa1024130 | MtrunA17_Chr0c01g0489181 | 86.957 | 46 | 6 | 0 | 68 | 113 | 56 | 101 | 1.17e-25 | 94.0 |
| Msa1024130 | MtrunA17_Chr8g0372461 | 50.000 | 60 | 30 | 0 | 61 | 120 | 103 | 162 | 2.48e-18 | 79.3 |
| Msa1024130 | MtrunA17_Chr8g0353111 | 55.932 | 59 | 22 | 1 | 68 | 122 | 113 | 171 | 3.72e-17 | 76.3 |
| Msa1024130 | MtrunA17_Chr3g0142171 | 60.000 | 45 | 18 | 0 | 76 | 120 | 83 | 127 | 6.21e-17 | 75.1 |
| Msa1024130 | MtrunA17_Chr1g0155791 | 50.820 | 61 | 30 | 0 | 60 | 120 | 103 | 163 | 2.17e-16 | 74.3 |
| Msa1024130 | MtrunA17_Chr5g0404781 | 63.415 | 41 | 15 | 0 | 77 | 117 | 98 | 138 | 4.52e-16 | 73.2 |
| Msa1024130 | MtrunA17_Chr5g0441921 | 64.286 | 42 | 15 | 0 | 79 | 120 | 124 | 165 | 9.08e-16 | 72.4 |
| Msa1024130 | MtrunA17_Chr3g0082511 | 56.000 | 50 | 21 | 1 | 79 | 128 | 134 | 182 | 1.63e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024130 | AT2G21400.3 | 64.583 | 48 | 17 | 0 | 73 | 120 | 4 | 51 | 2.96e-19 | 79.7 |
| Msa1024130 | AT2G21400.1 | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 3.18e-19 | 79.3 |
| Msa1024130 | AT2G21400.2 | 64.583 | 48 | 17 | 0 | 73 | 120 | 4 | 51 | 4.20e-19 | 79.7 |
| Msa1024130 | AT2G21400.4 | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 4.72e-19 | 79.3 |
| Msa1024130 | AT1G75520.1 | 48.438 | 64 | 31 | 1 | 59 | 120 | 103 | 166 | 4.70e-17 | 76.6 |
| Msa1024130 | AT3G51060.1 | 61.364 | 44 | 17 | 0 | 77 | 120 | 142 | 185 | 7.99e-17 | 75.9 |
| Msa1024130 | AT4G36260.1 | 54.717 | 53 | 23 | 1 | 77 | 129 | 92 | 143 | 1.59e-16 | 74.7 |
| Msa1024130 | AT5G33210.2 | 59.091 | 44 | 18 | 0 | 77 | 120 | 15 | 58 | 4.02e-16 | 69.7 |
| Msa1024130 | AT5G66350.3 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 4.22e-16 | 73.6 |
| Msa1024130 | AT5G66350.2 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 5.49e-16 | 73.6 |
| Msa1024130 | AT5G66350.1 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 5.61e-16 | 73.6 |
| Msa1024130 | AT5G33210.1 | 59.091 | 44 | 18 | 0 | 77 | 120 | 50 | 93 | 2.28e-15 | 69.3 |
| Msa1024130 | AT1G19790.2 | 50.000 | 56 | 26 | 1 | 67 | 120 | 105 | 160 | 3.99e-15 | 71.2 |
| Msa1024130 | AT1G19790.1 | 50.000 | 56 | 26 | 1 | 67 | 120 | 105 | 160 | 3.99e-15 | 71.2 |
| Msa1024130 | AT5G12330.3 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 1.89e-14 | 68.2 |
| Msa1024130 | AT5G12330.4 | 59.524 | 42 | 17 | 0 | 79 | 120 | 199 | 240 | 4.17e-14 | 68.6 |
| Msa1024130 | AT5G12330.1 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 4.52e-14 | 68.2 |
| Msa1024130 | AT5G12330.2 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 4.52e-14 | 68.2 |
| Msa1024130 | AT3G54430.1 | 53.191 | 47 | 17 | 1 | 70 | 116 | 37 | 78 | 1.07e-13 | 65.1 |
| Msa1024130 | AT2G18120.1 | 44.828 | 58 | 32 | 0 | 77 | 134 | 70 | 127 | 1.25e-13 | 65.9 |
| Msa1024130 | AT2G18120.2 | 44.828 | 58 | 32 | 0 | 77 | 134 | 70 | 127 | 1.38e-13 | 65.5 |
Find 41 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTGTTTGGTGGAAGTT+GGG | 0.310395 | 7_1:-52645749 | None:intergenic |
| ATTGTTTGTTTGGTGGAAGT+TGG | 0.347178 | 7_1:-52645750 | None:intergenic |
| ATGCACAATCCTTCTTTGAT+TGG | 0.363056 | 7_1:-52647808 | None:intergenic |
| TTCGGTCATGATTGTTTGTT+TGG | 0.366531 | 7_1:-52645760 | None:intergenic |
| TAAGGGTTAGGGTGAAGAGG+TGG | 0.375340 | 7_1:-52645871 | None:intergenic |
| ACCGATCTGGAGTGAATTCA+TGG | 0.400497 | 7_1:-52645699 | None:intergenic |
| GGATTTGAGTTTGCCGTGTT+CGG | 0.412366 | 7_1:-52645778 | None:intergenic |
| GGTGAGGGAAACCGATGGCG+GGG | 0.413789 | 7_1:-52645895 | None:intergenic |
| GATTGCGGCGACGGCGGAGG+AGG | 0.416666 | 7_1:-52645813 | None:intergenic |
| AGGGTGAAGAGGTGGGAAAT+TGG | 0.418104 | 7_1:-52645863 | None:intergenic |
| GGGTGAGGGAAACCGATGGC+GGG | 0.424253 | 7_1:-52645896 | None:intergenic |
| TGTTTGTTTGGTGGAAGTTG+GGG | 0.425035 | 7_1:-52645748 | None:intergenic |
| AACGAAGCCACTCACCGATC+TGG | 0.446314 | 7_1:-52645712 | None:intergenic |
| GGGGTGAGGGAAACCGATGG+CGG | 0.446566 | 7_1:-52645897 | None:intergenic |
| GGGTAAGGGTTAGGGTGAAG+AGG | 0.448412 | 7_1:-52645874 | None:intergenic |
| TCCTGCTGATAGAAAATTAG+TGG | 0.464493 | 7_1:+52647901 | Msa1024130:CDS |
| GTGAGGGAAACCGATGGCGG+GGG | 0.471021 | 7_1:-52645894 | None:intergenic |
| CGGAGGAGGGTGGCCGAAGT+AGG | 0.477759 | 7_1:-52645799 | None:intergenic |
| GGTTGAAAGGATTGCGGCGA+CGG | 0.493819 | 7_1:-52645822 | None:intergenic |
| AAGGATTGCGGCGACGGCGG+AGG | 0.507727 | 7_1:-52645816 | None:intergenic |
| GAATCTTCAATCTCGATACA+TGG | 0.513961 | 7_1:-52647965 | None:intergenic |
| AAGGGTTAGGGTGAAGAGGT+GGG | 0.523980 | 7_1:-52645870 | None:intergenic |
| GCGGCGACGGCGGAGGAGGG+TGG | 0.525558 | 7_1:-52645809 | None:intergenic |
| GTTTGTTTGGTGGAAGTTGG+GGG | 0.531733 | 7_1:-52645747 | None:intergenic |
| GGTCATGATTGTTTGTTTGG+TGG | 0.539968 | 7_1:-52645757 | None:intergenic |
| CTCGTACTGAGGAGGTTGAA+AGG | 0.548056 | 7_1:-52645835 | None:intergenic |
| ATTGCGGCGACGGCGGAGGA+GGG | 0.550016 | 7_1:-52645812 | None:intergenic |
| CTGTGGGAACCAATCAAAGA+AGG | 0.552569 | 7_1:+52647799 | Msa1024130:CDS |
| GTCTAAAATGTCAAGACTGT+GGG | 0.562102 | 7_1:+52647783 | Msa1024130:CDS |
| CAAACAATCATGACCGAACA+CGG | 0.568465 | 7_1:+52645765 | Msa1024130:CDS |
| GGCAAACTCAAATCCTACTT+CGG | 0.572114 | 7_1:+52645786 | Msa1024130:CDS |
| AAGTGCTTCTGATATGTGTA+TGG | 0.578912 | 7_1:-52647874 | None:intergenic |
| TGAAAGGATTGCGGCGACGG+CGG | 0.584093 | 7_1:-52645819 | None:intergenic |
| AAAGATCTGAAATGCATCCA+CGG | 0.607375 | 7_1:+52647927 | Msa1024130:CDS |
| GGTCTAAAATGTCAAGACTG+TGG | 0.611012 | 7_1:+52647782 | Msa1024130:CDS |
| AATTGGAAAGACTCGTACTG+AGG | 0.630700 | 7_1:-52645846 | None:intergenic |
| ATACACATATCAGAAGCACT+TGG | 0.637813 | 7_1:+52647876 | Msa1024130:CDS |
| TCCATGAATTCACTCCAGAT+CGG | 0.641820 | 7_1:+52645698 | None:intergenic |
| TGGAAAGACTCGTACTGAGG+AGG | 0.658466 | 7_1:-52645843 | None:intergenic |
| TGAGGAGGTTGAAAGGATTG+CGG | 0.659256 | 7_1:-52645828 | None:intergenic |
| ATTCACTCCAGATCGGTGAG+TGG | 0.692086 | 7_1:+52645705 | Msa1024130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGAAATTTAATGATTT+TGG | + | chr7_1:52646165-52646184 | Msa1024130:intron | 10.0% |
| !!! | TTTAGAAATTTAATGATTTT+GGG | + | chr7_1:52646166-52646185 | Msa1024130:intron | 10.0% |
| !! | ATATAATCTATGATAAATAA+AGG | - | chr7_1:52647178-52647197 | None:intergenic | 10.0% |
| !!! | ATTTAGAAATTTAATGATTT+TGG | + | chr7_1:52646165-52646184 | Msa1024130:intron | 10.0% |
| !!! | TTTAGAAATTTAATGATTTT+GGG | + | chr7_1:52646166-52646185 | Msa1024130:intron | 10.0% |
| !! | ATATAATCTATGATAAATAA+AGG | - | chr7_1:52647178-52647197 | None:intergenic | 10.0% |
| !! | GTATATTTATCTTATTGTAA+TGG | + | chr7_1:52646325-52646344 | Msa1024130:intron | 15.0% |
| !!! | ACTTTTTAAGTTTATATAAG+TGG | - | chr7_1:52646502-52646521 | None:intergenic | 15.0% |
| !! | AAAATTATAAATTTACAGCA+TGG | - | chr7_1:52647558-52647577 | None:intergenic | 15.0% |
| !! | GTATATTTATCTTATTGTAA+TGG | + | chr7_1:52646325-52646344 | Msa1024130:intron | 15.0% |
| !!! | ACTTTTTAAGTTTATATAAG+TGG | - | chr7_1:52646502-52646521 | None:intergenic | 15.0% |
| !! | AAAATTATAAATTTACAGCA+TGG | - | chr7_1:52647558-52647577 | None:intergenic | 15.0% |
| !!! | GAGATTTTGTTATTTTTTGT+TGG | + | chr7_1:52646226-52646245 | Msa1024130:intron | 20.0% |
| !!! | TTTTAAGTTTATATAAGTGG+AGG | - | chr7_1:52646499-52646518 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTAGGAAAATATT+TGG | + | chr7_1:52646801-52646820 | Msa1024130:intron | 20.0% |
| !! | ACATATTATTCCAATACTAA+AGG | - | chr7_1:52646947-52646966 | None:intergenic | 20.0% |
| !! | ACAAAATGGTAAAACAAAAT+TGG | - | chr7_1:52647009-52647028 | None:intergenic | 20.0% |
| !! | AAATGTAGAAAATTTGGATT+TGG | + | chr7_1:52647041-52647060 | Msa1024130:intron | 20.0% |
| !!! | CTATAACATTTAACTTGATA+TGG | - | chr7_1:52647246-52647265 | None:intergenic | 20.0% |
| !! | CATATCAAGTTAAATGTTAT+AGG | + | chr7_1:52647244-52647263 | Msa1024130:intron | 20.0% |
| !! | AATTTAAAAGAATTACCAAC+AGG | - | chr7_1:52647311-52647330 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTAGGAAATTTA+TGG | + | chr7_1:52647425-52647444 | Msa1024130:intron | 20.0% |
| !!! | TTTATGAGTTTAAAACCTTT+TGG | - | chr7_1:52647684-52647703 | None:intergenic | 20.0% |
| !!! | GAGATTTTGTTATTTTTTGT+TGG | + | chr7_1:52646226-52646245 | Msa1024130:intron | 20.0% |
| !!! | TTTTAAGTTTATATAAGTGG+AGG | - | chr7_1:52646499-52646518 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTAGGAAAATATT+TGG | + | chr7_1:52646801-52646820 | Msa1024130:intron | 20.0% |
| !! | ACATATTATTCCAATACTAA+AGG | - | chr7_1:52646947-52646966 | None:intergenic | 20.0% |
| !! | ACAAAATGGTAAAACAAAAT+TGG | - | chr7_1:52647009-52647028 | None:intergenic | 20.0% |
| !! | AAATGTAGAAAATTTGGATT+TGG | + | chr7_1:52647041-52647060 | Msa1024130:intron | 20.0% |
| !!! | CTATAACATTTAACTTGATA+TGG | - | chr7_1:52647246-52647265 | None:intergenic | 20.0% |
| !! | CATATCAAGTTAAATGTTAT+AGG | + | chr7_1:52647244-52647263 | Msa1024130:intron | 20.0% |
| !! | AATTTAAAAGAATTACCAAC+AGG | - | chr7_1:52647311-52647330 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTAGGAAATTTA+TGG | + | chr7_1:52647425-52647444 | Msa1024130:intron | 20.0% |
| !!! | TTTATGAGTTTAAAACCTTT+TGG | - | chr7_1:52647684-52647703 | None:intergenic | 20.0% |
| ! | ACAAAATCTCCAAACAAAAA+GGG | - | chr7_1:52646216-52646235 | None:intergenic | 25.0% |
| ! | AACAAAATCTCCAAACAAAA+AGG | - | chr7_1:52646217-52646236 | None:intergenic | 25.0% |
| ! | GGTTTATACTTATCTAATCT+TGG | + | chr7_1:52646247-52646266 | Msa1024130:intron | 25.0% |
| !!! | GAGTTCTTTTTTGAATTCTT+AGG | + | chr7_1:52646448-52646467 | Msa1024130:intron | 25.0% |
| ! | TATTGTACTTTCAATTATGC+AGG | + | chr7_1:52646582-52646601 | Msa1024130:intron | 25.0% |
| ! | TTTCAATTATGCAGGATTTA+GGG | + | chr7_1:52646590-52646609 | Msa1024130:intron | 25.0% |
| ! | TGCTACTGTTCTATATAATA+AGG | + | chr7_1:52646696-52646715 | Msa1024130:intron | 25.0% |
| !! | TACAATCTATCATTCCTTTT+AGG | + | chr7_1:52646769-52646788 | Msa1024130:intron | 25.0% |
| ! | TAGAAAATTTGGATTTGGAT+TGG | + | chr7_1:52647046-52647065 | Msa1024130:intron | 25.0% |
| ! | TGATTTAAACTAACTTCAGT+TGG | + | chr7_1:52647203-52647222 | Msa1024130:intron | 25.0% |
| ! | ACATGTCAATTTAAGTAGTT+AGG | + | chr7_1:52647415-52647434 | Msa1024130:intron | 25.0% |
| ! | TATAAGGGAAACTAAATTCA+AGG | - | chr7_1:52647523-52647542 | None:intergenic | 25.0% |
| !! | GAATTTAGTTTCCCTTATAA+TGG | + | chr7_1:52647524-52647543 | Msa1024130:intron | 25.0% |
| ! | AAAATGTATTCAACCCAATT+AGG | + | chr7_1:52647740-52647759 | Msa1024130:intron | 25.0% |
| ! | AAATGTATTCAACCCAATTA+GGG | + | chr7_1:52647741-52647760 | Msa1024130:intron | 25.0% |
| ! | ACAAAATCTCCAAACAAAAA+GGG | - | chr7_1:52646216-52646235 | None:intergenic | 25.0% |
| ! | AACAAAATCTCCAAACAAAA+AGG | - | chr7_1:52646217-52646236 | None:intergenic | 25.0% |
| ! | GGTTTATACTTATCTAATCT+TGG | + | chr7_1:52646247-52646266 | Msa1024130:intron | 25.0% |
| !!! | GAGTTCTTTTTTGAATTCTT+AGG | + | chr7_1:52646448-52646467 | Msa1024130:intron | 25.0% |
| ! | TATTGTACTTTCAATTATGC+AGG | + | chr7_1:52646582-52646601 | Msa1024130:intron | 25.0% |
| ! | TTTCAATTATGCAGGATTTA+GGG | + | chr7_1:52646590-52646609 | Msa1024130:intron | 25.0% |
| ! | TGCTACTGTTCTATATAATA+AGG | + | chr7_1:52646696-52646715 | Msa1024130:intron | 25.0% |
| !! | TACAATCTATCATTCCTTTT+AGG | + | chr7_1:52646769-52646788 | Msa1024130:intron | 25.0% |
| ! | TAGAAAATTTGGATTTGGAT+TGG | + | chr7_1:52647046-52647065 | Msa1024130:intron | 25.0% |
| ! | TGATTTAAACTAACTTCAGT+TGG | + | chr7_1:52647203-52647222 | Msa1024130:intron | 25.0% |
| ! | ACATGTCAATTTAAGTAGTT+AGG | + | chr7_1:52647415-52647434 | Msa1024130:intron | 25.0% |
| ! | TATAAGGGAAACTAAATTCA+AGG | - | chr7_1:52647523-52647542 | None:intergenic | 25.0% |
| !! | GAATTTAGTTTCCCTTATAA+TGG | + | chr7_1:52647524-52647543 | Msa1024130:intron | 25.0% |
| ! | AAAATGTATTCAACCCAATT+AGG | + | chr7_1:52647740-52647759 | Msa1024130:intron | 25.0% |
| ! | AAATGTATTCAACCCAATTA+GGG | + | chr7_1:52647741-52647760 | Msa1024130:intron | 25.0% |
| TAGTAGCCATAACTGTAATA+GGG | - | chr7_1:52645959-52645978 | None:intergenic | 30.0% | |
| TTAGTAGCCATAACTGTAAT+AGG | - | chr7_1:52645960-52645979 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGCAAGAAGA+AGG | - | chr7_1:52646001-52646020 | None:intergenic | 30.0% | |
| ! | TTATAGCTTATTTCTTCCAC+TGG | + | chr7_1:52646028-52646047 | Msa1024130:intron | 30.0% |
| ! | TATAGCTTATTTCTTCCACT+GGG | + | chr7_1:52646029-52646048 | Msa1024130:intron | 30.0% |
| GTTTATATAAGTGGAGGAAT+TGG | - | chr7_1:52646493-52646512 | None:intergenic | 30.0% | |
| ATAGAACTTTCTAAGTCAGA+AGG | - | chr7_1:52646565-52646584 | None:intergenic | 30.0% | |
| CTTTCAATTATGCAGGATTT+AGG | + | chr7_1:52646589-52646608 | Msa1024130:intron | 30.0% | |
| AAGGAATGATAGATTGTACT+TGG | - | chr7_1:52646767-52646786 | None:intergenic | 30.0% | |
| !! | ATCTATCATTCCTTTTAGGT+TGG | + | chr7_1:52646773-52646792 | Msa1024130:intron | 30.0% |
| AACATTATAGCCAACCTAAA+AGG | - | chr7_1:52646786-52646805 | None:intergenic | 30.0% | |
| ! | TGATTGACACTTGAGTATTT+TGG | + | chr7_1:52646835-52646854 | Msa1024130:intron | 30.0% |
| GAGAAAGATTTGAAAAAGAG+AGG | + | chr7_1:52646857-52646876 | Msa1024130:intron | 30.0% | |
| GACTGATAAGTATTAGAACT+TGG | + | chr7_1:52646890-52646909 | Msa1024130:intron | 30.0% | |
| TTGGAAAGTGACAACATAAA+AGG | - | chr7_1:52646990-52647009 | None:intergenic | 30.0% | |
| GGTGTCAAATGTAGAAAATT+TGG | + | chr7_1:52647035-52647054 | Msa1024130:intron | 30.0% | |
| AATTGAGCATAGAGAAACAA+AGG | - | chr7_1:52647275-52647294 | None:intergenic | 30.0% | |
| TGAGATGCATATATAACCAT+TGG | - | chr7_1:52647387-52647406 | None:intergenic | 30.0% | |
| TACTATATCCTCTATGTGAT+GGG | - | chr7_1:52647645-52647664 | None:intergenic | 30.0% | |
| ATACTATATCCTCTATGTGA+TGG | - | chr7_1:52647646-52647665 | None:intergenic | 30.0% | |
| !! | TTTAAAACCTTTTGGTCGTA+TGG | - | chr7_1:52647676-52647695 | None:intergenic | 30.0% |
| AATGTATTCAACCCAATTAG+GGG | + | chr7_1:52647742-52647761 | Msa1024130:intron | 30.0% | |
| TAGTAGCCATAACTGTAATA+GGG | - | chr7_1:52645959-52645978 | None:intergenic | 30.0% | |
| TTAGTAGCCATAACTGTAAT+AGG | - | chr7_1:52645960-52645979 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGCAAGAAGA+AGG | - | chr7_1:52646001-52646020 | None:intergenic | 30.0% | |
| ! | TTATAGCTTATTTCTTCCAC+TGG | + | chr7_1:52646028-52646047 | Msa1024130:intron | 30.0% |
| ! | TATAGCTTATTTCTTCCACT+GGG | + | chr7_1:52646029-52646048 | Msa1024130:intron | 30.0% |
| GTTTATATAAGTGGAGGAAT+TGG | - | chr7_1:52646493-52646512 | None:intergenic | 30.0% | |
| ATAGAACTTTCTAAGTCAGA+AGG | - | chr7_1:52646565-52646584 | None:intergenic | 30.0% | |
| CTTTCAATTATGCAGGATTT+AGG | + | chr7_1:52646589-52646608 | Msa1024130:intron | 30.0% | |
| AAGGAATGATAGATTGTACT+TGG | - | chr7_1:52646767-52646786 | None:intergenic | 30.0% | |
| !! | ATCTATCATTCCTTTTAGGT+TGG | + | chr7_1:52646773-52646792 | Msa1024130:intron | 30.0% |
| AACATTATAGCCAACCTAAA+AGG | - | chr7_1:52646786-52646805 | None:intergenic | 30.0% | |
| ! | TGATTGACACTTGAGTATTT+TGG | + | chr7_1:52646835-52646854 | Msa1024130:intron | 30.0% |
| GAGAAAGATTTGAAAAAGAG+AGG | + | chr7_1:52646857-52646876 | Msa1024130:intron | 30.0% | |
| GACTGATAAGTATTAGAACT+TGG | + | chr7_1:52646890-52646909 | Msa1024130:intron | 30.0% | |
| TTGGAAAGTGACAACATAAA+AGG | - | chr7_1:52646990-52647009 | None:intergenic | 30.0% | |
| GGTGTCAAATGTAGAAAATT+TGG | + | chr7_1:52647035-52647054 | Msa1024130:intron | 30.0% | |
| AATTGAGCATAGAGAAACAA+AGG | - | chr7_1:52647275-52647294 | None:intergenic | 30.0% | |
| TGAGATGCATATATAACCAT+TGG | - | chr7_1:52647387-52647406 | None:intergenic | 30.0% | |
| TACTATATCCTCTATGTGAT+GGG | - | chr7_1:52647645-52647664 | None:intergenic | 30.0% | |
| ATACTATATCCTCTATGTGA+TGG | - | chr7_1:52647646-52647665 | None:intergenic | 30.0% | |
| !! | TTTAAAACCTTTTGGTCGTA+TGG | - | chr7_1:52647676-52647695 | None:intergenic | 30.0% |
| AATGTATTCAACCCAATTAG+GGG | + | chr7_1:52647742-52647761 | Msa1024130:intron | 30.0% | |
| ! | TTGTTTGTTTGGTGGAAGTT+GGG | - | chr7_1:52645752-52645771 | None:intergenic | 35.0% |
| ! | ATTGTTTGTTTGGTGGAAGT+TGG | - | chr7_1:52645753-52645772 | None:intergenic | 35.0% |
| TTCGGTCATGATTGTTTGTT+TGG | - | chr7_1:52645763-52645782 | None:intergenic | 35.0% | |
| !! | TATGGCTACTAAGCTTTTTC+TGG | + | chr7_1:52645968-52645987 | Msa1024130:intron | 35.0% |
| !!! | TATTTTGATGAGCTCTGTGA+CGG | + | chr7_1:52646133-52646152 | Msa1024130:intron | 35.0% |
| ! | ATGCATCTTCCCTTTTTGTT+TGG | + | chr7_1:52646204-52646223 | Msa1024130:intron | 35.0% |
| CCAAGATATCAACAACAAAG+AGG | - | chr7_1:52646303-52646322 | None:intergenic | 35.0% | |
| !! | CCTCTTTGTTGTTGATATCT+TGG | + | chr7_1:52646300-52646319 | Msa1024130:intron | 35.0% |
| !! | GGTTGGCTATAATGTTTTGT+AGG | + | chr7_1:52646790-52646809 | Msa1024130:intron | 35.0% |
| TTAGAACTTGGAACGAGATT+TGG | + | chr7_1:52646902-52646921 | Msa1024130:intron | 35.0% | |
| CAGTTCATCACCTTTAGTAT+TGG | + | chr7_1:52646934-52646953 | Msa1024130:intron | 35.0% | |
| AAGTGACAACATAAAAGGCA+TGG | - | chr7_1:52646985-52647004 | None:intergenic | 35.0% | |
| ! | GTTTTACCATTTTGTGCAGA+AGG | + | chr7_1:52647014-52647033 | Msa1024130:intron | 35.0% |
| AACTTCAGTTGGATCATGTA+AGG | + | chr7_1:52647214-52647233 | Msa1024130:intron | 35.0% | |
| TTGACTCAAATATCTCCTGT+TGG | + | chr7_1:52647293-52647312 | Msa1024130:intron | 35.0% | |
| CTTTGTCAGTTACAAACCAA+TGG | + | chr7_1:52647368-52647387 | Msa1024130:intron | 35.0% | |
| CCAATTACACAGTTATCGTA+CGG | + | chr7_1:52647454-52647473 | Msa1024130:intron | 35.0% | |
| ! | CTTTTATTCCCATCACATAG+AGG | + | chr7_1:52647634-52647653 | Msa1024130:intron | 35.0% |
| ATGTATTCAACCCAATTAGG+GGG | + | chr7_1:52647743-52647762 | Msa1024130:intron | 35.0% | |
| ! | GTCTAAAATGTCAAGACTGT+GGG | + | chr7_1:52647783-52647802 | Msa1024130:CDS | 35.0% |
| ATGCACAATCCTTCTTTGAT+TGG | - | chr7_1:52647811-52647830 | None:intergenic | 35.0% | |
| AAGTGCTTCTGATATGTGTA+TGG | - | chr7_1:52647877-52647896 | None:intergenic | 35.0% | |
| !! | ATACACATATCAGAAGCACT+TGG | + | chr7_1:52647876-52647895 | Msa1024130:CDS | 35.0% |
| TCCTGCTGATAGAAAATTAG+TGG | + | chr7_1:52647901-52647920 | Msa1024130:CDS | 35.0% | |
| ! | TCCACTAATTTTCTATCAGC+AGG | - | chr7_1:52647905-52647924 | None:intergenic | 35.0% |
| ! | AAAGATCTGAAATGCATCCA+CGG | + | chr7_1:52647927-52647946 | Msa1024130:CDS | 35.0% |
| ! | ATCTCGATACATGGCATTTT+AGG | - | chr7_1:52647959-52647978 | None:intergenic | 35.0% |
| GAATCTTCAATCTCGATACA+TGG | - | chr7_1:52647968-52647987 | None:intergenic | 35.0% | |
| ! | TTGTTTGTTTGGTGGAAGTT+GGG | - | chr7_1:52645752-52645771 | None:intergenic | 35.0% |
| ! | ATTGTTTGTTTGGTGGAAGT+TGG | - | chr7_1:52645753-52645772 | None:intergenic | 35.0% |
| TTCGGTCATGATTGTTTGTT+TGG | - | chr7_1:52645763-52645782 | None:intergenic | 35.0% | |
| !! | TATGGCTACTAAGCTTTTTC+TGG | + | chr7_1:52645968-52645987 | Msa1024130:intron | 35.0% |
| !!! | TATTTTGATGAGCTCTGTGA+CGG | + | chr7_1:52646133-52646152 | Msa1024130:intron | 35.0% |
| ! | ATGCATCTTCCCTTTTTGTT+TGG | + | chr7_1:52646204-52646223 | Msa1024130:intron | 35.0% |
| CCAAGATATCAACAACAAAG+AGG | - | chr7_1:52646303-52646322 | None:intergenic | 35.0% | |
| !! | CCTCTTTGTTGTTGATATCT+TGG | + | chr7_1:52646300-52646319 | Msa1024130:intron | 35.0% |
| !! | GGTTGGCTATAATGTTTTGT+AGG | + | chr7_1:52646790-52646809 | Msa1024130:intron | 35.0% |
| TTAGAACTTGGAACGAGATT+TGG | + | chr7_1:52646902-52646921 | Msa1024130:intron | 35.0% | |
| CAGTTCATCACCTTTAGTAT+TGG | + | chr7_1:52646934-52646953 | Msa1024130:intron | 35.0% | |
| AAGTGACAACATAAAAGGCA+TGG | - | chr7_1:52646985-52647004 | None:intergenic | 35.0% | |
| ! | GTTTTACCATTTTGTGCAGA+AGG | + | chr7_1:52647014-52647033 | Msa1024130:intron | 35.0% |
| AACTTCAGTTGGATCATGTA+AGG | + | chr7_1:52647214-52647233 | Msa1024130:intron | 35.0% | |
| TTGACTCAAATATCTCCTGT+TGG | + | chr7_1:52647293-52647312 | Msa1024130:intron | 35.0% | |
| CTTTGTCAGTTACAAACCAA+TGG | + | chr7_1:52647368-52647387 | Msa1024130:intron | 35.0% | |
| CCAATTACACAGTTATCGTA+CGG | + | chr7_1:52647454-52647473 | Msa1024130:intron | 35.0% | |
| ! | CTTTTATTCCCATCACATAG+AGG | + | chr7_1:52647634-52647653 | Msa1024130:intron | 35.0% |
| ATGTATTCAACCCAATTAGG+GGG | + | chr7_1:52647743-52647762 | Msa1024130:intron | 35.0% | |
| ! | GTCTAAAATGTCAAGACTGT+GGG | + | chr7_1:52647783-52647802 | Msa1024130:CDS | 35.0% |
| ATGCACAATCCTTCTTTGAT+TGG | - | chr7_1:52647811-52647830 | None:intergenic | 35.0% | |
| AAGTGCTTCTGATATGTGTA+TGG | - | chr7_1:52647877-52647896 | None:intergenic | 35.0% | |
| !! | ATACACATATCAGAAGCACT+TGG | + | chr7_1:52647876-52647895 | Msa1024130:CDS | 35.0% |
| TCCTGCTGATAGAAAATTAG+TGG | + | chr7_1:52647901-52647920 | Msa1024130:CDS | 35.0% | |
| ! | TCCACTAATTTTCTATCAGC+AGG | - | chr7_1:52647905-52647924 | None:intergenic | 35.0% |
| ! | AAAGATCTGAAATGCATCCA+CGG | + | chr7_1:52647927-52647946 | Msa1024130:CDS | 35.0% |
| ! | ATCTCGATACATGGCATTTT+AGG | - | chr7_1:52647959-52647978 | None:intergenic | 35.0% |
| GAATCTTCAATCTCGATACA+TGG | - | chr7_1:52647968-52647987 | None:intergenic | 35.0% | |
| ! | TGTTTGTTTGGTGGAAGTTG+GGG | - | chr7_1:52645751-52645770 | None:intergenic | 40.0% |
| GGTCATGATTGTTTGTTTGG+TGG | - | chr7_1:52645760-52645779 | None:intergenic | 40.0% | |
| CAAACAATCATGACCGAACA+CGG | + | chr7_1:52645765-52645784 | Msa1024130:CDS | 40.0% | |
| GGCAAACTCAAATCCTACTT+CGG | + | chr7_1:52645786-52645805 | Msa1024130:CDS | 40.0% | |
| AATTGGAAAGACTCGTACTG+AGG | - | chr7_1:52645849-52645868 | None:intergenic | 40.0% | |
| ATAACTGTAATAGGGAGGAG+GGG | - | chr7_1:52645951-52645970 | None:intergenic | 40.0% | |
| CATAACTGTAATAGGGAGGA+GGG | - | chr7_1:52645952-52645971 | None:intergenic | 40.0% | |
| TAGCCATAACTGTAATAGGG+AGG | - | chr7_1:52645956-52645975 | None:intergenic | 40.0% | |
| AGCTACAAAACAAAACCCAG+TGG | - | chr7_1:52646047-52646066 | None:intergenic | 40.0% | |
| !! | ATTTTGATGAGCTCTGTGAC+GGG | + | chr7_1:52646134-52646153 | Msa1024130:intron | 40.0% |
| GTACCTTTGATGTAGTTGTG+TGG | + | chr7_1:52646718-52646737 | Msa1024130:intron | 40.0% | |
| GTACCACACAACTACATCAA+AGG | - | chr7_1:52646724-52646743 | None:intergenic | 40.0% | |
| GGACACAAACAGAGTACAAA+AGG | - | chr7_1:52646746-52646765 | None:intergenic | 40.0% | |
| TTGACACCTTCTGCACAAAA+TGG | - | chr7_1:52647023-52647042 | None:intergenic | 40.0% | |
| TGAGCATAGAGAAACAAAGG+AGG | - | chr7_1:52647272-52647291 | None:intergenic | 40.0% | |
| CCGTACGATAACTGTGTAAT+TGG | - | chr7_1:52647457-52647476 | None:intergenic | 40.0% | |
| TGGCAAAGCAGCCATTATAA+GGG | - | chr7_1:52647538-52647557 | None:intergenic | 40.0% | |
| ATGGCAAAGCAGCCATTATA+AGG | - | chr7_1:52647539-52647558 | None:intergenic | 40.0% | |
| AGTAACACCATACGACCAAA+AGG | + | chr7_1:52647666-52647685 | Msa1024130:intron | 40.0% | |
| ! | GGTCTAAAATGTCAAGACTG+TGG | + | chr7_1:52647782-52647801 | Msa1024130:CDS | 40.0% |
| ! | TGTTTGTTTGGTGGAAGTTG+GGG | - | chr7_1:52645751-52645770 | None:intergenic | 40.0% |
| GGTCATGATTGTTTGTTTGG+TGG | - | chr7_1:52645760-52645779 | None:intergenic | 40.0% | |
| CAAACAATCATGACCGAACA+CGG | + | chr7_1:52645765-52645784 | Msa1024130:CDS | 40.0% | |
| GGCAAACTCAAATCCTACTT+CGG | + | chr7_1:52645786-52645805 | Msa1024130:CDS | 40.0% | |
| AATTGGAAAGACTCGTACTG+AGG | - | chr7_1:52645849-52645868 | None:intergenic | 40.0% | |
| ATAACTGTAATAGGGAGGAG+GGG | - | chr7_1:52645951-52645970 | None:intergenic | 40.0% | |
| CATAACTGTAATAGGGAGGA+GGG | - | chr7_1:52645952-52645971 | None:intergenic | 40.0% | |
| TAGCCATAACTGTAATAGGG+AGG | - | chr7_1:52645956-52645975 | None:intergenic | 40.0% | |
| AGCTACAAAACAAAACCCAG+TGG | - | chr7_1:52646047-52646066 | None:intergenic | 40.0% | |
| !! | ATTTTGATGAGCTCTGTGAC+GGG | + | chr7_1:52646134-52646153 | Msa1024130:intron | 40.0% |
| GTACCTTTGATGTAGTTGTG+TGG | + | chr7_1:52646718-52646737 | Msa1024130:intron | 40.0% | |
| GTACCACACAACTACATCAA+AGG | - | chr7_1:52646724-52646743 | None:intergenic | 40.0% | |
| GGACACAAACAGAGTACAAA+AGG | - | chr7_1:52646746-52646765 | None:intergenic | 40.0% | |
| TTGACACCTTCTGCACAAAA+TGG | - | chr7_1:52647023-52647042 | None:intergenic | 40.0% | |
| TGAGCATAGAGAAACAAAGG+AGG | - | chr7_1:52647272-52647291 | None:intergenic | 40.0% | |
| CCGTACGATAACTGTGTAAT+TGG | - | chr7_1:52647457-52647476 | None:intergenic | 40.0% | |
| TGGCAAAGCAGCCATTATAA+GGG | - | chr7_1:52647538-52647557 | None:intergenic | 40.0% | |
| ATGGCAAAGCAGCCATTATA+AGG | - | chr7_1:52647539-52647558 | None:intergenic | 40.0% | |
| AGTAACACCATACGACCAAA+AGG | + | chr7_1:52647666-52647685 | Msa1024130:intron | 40.0% | |
| ! | GGTCTAAAATGTCAAGACTG+TGG | + | chr7_1:52647782-52647801 | Msa1024130:CDS | 40.0% |
| ! | GTTTGTTTGGTGGAAGTTGG+GGG | - | chr7_1:52645750-52645769 | None:intergenic | 45.0% |
| ! | GGATTTGAGTTTGCCGTGTT+CGG | - | chr7_1:52645781-52645800 | None:intergenic | 45.0% |
| TGAGGAGGTTGAAAGGATTG+CGG | - | chr7_1:52645831-52645850 | None:intergenic | 45.0% | |
| CCATAACTGTAATAGGGAGG+AGG | - | chr7_1:52645953-52645972 | None:intergenic | 45.0% | |
| CCTCCTCCCTATTACAGTTA+TGG | + | chr7_1:52645950-52645969 | Msa1024130:intron | 45.0% | |
| CACTTCTTCTCCCCCTAATT+GGG | - | chr7_1:52647756-52647775 | None:intergenic | 45.0% | |
| ACACTTCTTCTCCCCCTAAT+TGG | - | chr7_1:52647757-52647776 | None:intergenic | 45.0% | |
| !! | AGGGGGAGAAGAAGTGTTAA+AGG | + | chr7_1:52647760-52647779 | Msa1024130:intron | 45.0% |
| !! | GGGGGAGAAGAAGTGTTAAA+GGG | + | chr7_1:52647761-52647780 | Msa1024130:intron | 45.0% |
| CTGTGGGAACCAATCAAAGA+AGG | + | chr7_1:52647799-52647818 | Msa1024130:CDS | 45.0% | |
| ! | GTTTGTTTGGTGGAAGTTGG+GGG | - | chr7_1:52645750-52645769 | None:intergenic | 45.0% |
| ! | GGATTTGAGTTTGCCGTGTT+CGG | - | chr7_1:52645781-52645800 | None:intergenic | 45.0% |
| TGAGGAGGTTGAAAGGATTG+CGG | - | chr7_1:52645831-52645850 | None:intergenic | 45.0% | |
| CCATAACTGTAATAGGGAGG+AGG | - | chr7_1:52645953-52645972 | None:intergenic | 45.0% | |
| CCTCCTCCCTATTACAGTTA+TGG | + | chr7_1:52645950-52645969 | Msa1024130:intron | 45.0% | |
| CACTTCTTCTCCCCCTAATT+GGG | - | chr7_1:52647756-52647775 | None:intergenic | 45.0% | |
| ACACTTCTTCTCCCCCTAAT+TGG | - | chr7_1:52647757-52647776 | None:intergenic | 45.0% | |
| !! | AGGGGGAGAAGAAGTGTTAA+AGG | + | chr7_1:52647760-52647779 | Msa1024130:intron | 45.0% |
| !! | GGGGGAGAAGAAGTGTTAAA+GGG | + | chr7_1:52647761-52647780 | Msa1024130:intron | 45.0% |
| CTGTGGGAACCAATCAAAGA+AGG | + | chr7_1:52647799-52647818 | Msa1024130:CDS | 45.0% | |
| ATTCACTCCAGATCGGTGAG+TGG | + | chr7_1:52645705-52645724 | Msa1024130:CDS | 50.0% | |
| TTTGGTGGAAGTTGGGGGTT+AGG | - | chr7_1:52645745-52645764 | None:intergenic | 50.0% | |
| CTCGTACTGAGGAGGTTGAA+AGG | - | chr7_1:52645838-52645857 | None:intergenic | 50.0% | |
| TGGAAAGACTCGTACTGAGG+AGG | - | chr7_1:52645846-52645865 | None:intergenic | 50.0% | |
| AGGGTGAAGAGGTGGGAAAT+TGG | - | chr7_1:52645866-52645885 | None:intergenic | 50.0% | |
| AAGGGTTAGGGTGAAGAGGT+GGG | - | chr7_1:52645873-52645892 | None:intergenic | 50.0% | |
| TAAGGGTTAGGGTGAAGAGG+TGG | - | chr7_1:52645874-52645893 | None:intergenic | 50.0% | |
| ATTCACTCCAGATCGGTGAG+TGG | + | chr7_1:52645705-52645724 | Msa1024130:CDS | 50.0% | |
| TTTGGTGGAAGTTGGGGGTT+AGG | - | chr7_1:52645745-52645764 | None:intergenic | 50.0% | |
| CTCGTACTGAGGAGGTTGAA+AGG | - | chr7_1:52645838-52645857 | None:intergenic | 50.0% | |
| TGGAAAGACTCGTACTGAGG+AGG | - | chr7_1:52645846-52645865 | None:intergenic | 50.0% | |
| AGGGTGAAGAGGTGGGAAAT+TGG | - | chr7_1:52645866-52645885 | None:intergenic | 50.0% | |
| AAGGGTTAGGGTGAAGAGGT+GGG | - | chr7_1:52645873-52645892 | None:intergenic | 50.0% | |
| TAAGGGTTAGGGTGAAGAGG+TGG | - | chr7_1:52645874-52645893 | None:intergenic | 50.0% | |
| AACGAAGCCACTCACCGATC+TGG | - | chr7_1:52645715-52645734 | None:intergenic | 55.0% | |
| GTGGAAGTTGGGGGTTAGGA+GGG | - | chr7_1:52645741-52645760 | None:intergenic | 55.0% | |
| GGTTGAAAGGATTGCGGCGA+CGG | - | chr7_1:52645825-52645844 | None:intergenic | 55.0% | |
| GGGTAAGGGTTAGGGTGAAG+AGG | - | chr7_1:52645877-52645896 | None:intergenic | 55.0% | |
| ACTGTAATAGGGAGGAGGGG+CGG | - | chr7_1:52645948-52645967 | None:intergenic | 55.0% | |
| !!! | GGCATTTTAGGACTCTGCCG+TGG | - | chr7_1:52647947-52647966 | None:intergenic | 55.0% |
| AACGAAGCCACTCACCGATC+TGG | - | chr7_1:52645715-52645734 | None:intergenic | 55.0% | |
| GTGGAAGTTGGGGGTTAGGA+GGG | - | chr7_1:52645741-52645760 | None:intergenic | 55.0% | |
| GGTTGAAAGGATTGCGGCGA+CGG | - | chr7_1:52645825-52645844 | None:intergenic | 55.0% | |
| GGGTAAGGGTTAGGGTGAAG+AGG | - | chr7_1:52645877-52645896 | None:intergenic | 55.0% | |
| ACTGTAATAGGGAGGAGGGG+CGG | - | chr7_1:52645948-52645967 | None:intergenic | 55.0% | |
| !!! | GGCATTTTAGGACTCTGCCG+TGG | - | chr7_1:52647947-52647966 | None:intergenic | 55.0% |
| GGTGGAAGTTGGGGGTTAGG+AGG | - | chr7_1:52645742-52645761 | None:intergenic | 60.0% | |
| TGAAAGGATTGCGGCGACGG+CGG | - | chr7_1:52645822-52645841 | None:intergenic | 60.0% | |
| !! | GATGGCGGGGGTAAGGGTTA+GGG | - | chr7_1:52645885-52645904 | None:intergenic | 60.0% |
| CTAACCCTTACCCCCGCCAT+CGG | + | chr7_1:52645884-52645903 | Msa1024130:CDS | 60.0% | |
| !! | GAAACCGATGGCGGGGGTAA+GGG | - | chr7_1:52645891-52645910 | None:intergenic | 60.0% |
| TAATAGGGAGGAGGGGCGGA+GGG | - | chr7_1:52645944-52645963 | None:intergenic | 60.0% | |
| GGTGGAAGTTGGGGGTTAGG+AGG | - | chr7_1:52645742-52645761 | None:intergenic | 60.0% | |
| TGAAAGGATTGCGGCGACGG+CGG | - | chr7_1:52645822-52645841 | None:intergenic | 60.0% | |
| !! | GATGGCGGGGGTAAGGGTTA+GGG | - | chr7_1:52645885-52645904 | None:intergenic | 60.0% |
| CTAACCCTTACCCCCGCCAT+CGG | + | chr7_1:52645884-52645903 | Msa1024130:CDS | 60.0% | |
| !! | GAAACCGATGGCGGGGGTAA+GGG | - | chr7_1:52645891-52645910 | None:intergenic | 60.0% |
| TAATAGGGAGGAGGGGCGGA+GGG | - | chr7_1:52645944-52645963 | None:intergenic | 60.0% | |
| !! | CGATGGCGGGGGTAAGGGTT+AGG | - | chr7_1:52645886-52645905 | None:intergenic | 65.0% |
| !! | GGAAACCGATGGCGGGGGTA+AGG | - | chr7_1:52645892-52645911 | None:intergenic | 65.0% |
| ! | GTGAGGGAAACCGATGGCGG+GGG | - | chr7_1:52645897-52645916 | None:intergenic | 65.0% |
| GGTGAGGGAAACCGATGGCG+GGG | - | chr7_1:52645898-52645917 | None:intergenic | 65.0% | |
| GGGTGAGGGAAACCGATGGC+GGG | - | chr7_1:52645899-52645918 | None:intergenic | 65.0% | |
| GGGGTGAGGGAAACCGATGG+CGG | - | chr7_1:52645900-52645919 | None:intergenic | 65.0% | |
| GTCGGGGTGAGGGAAACCGA+TGG | - | chr7_1:52645903-52645922 | None:intergenic | 65.0% | |
| TCGGATCCAGGAGGACGGTC+GGG | - | chr7_1:52645920-52645939 | None:intergenic | 65.0% | |
| GTCGGATCCAGGAGGACGGT+CGG | - | chr7_1:52645921-52645940 | None:intergenic | 65.0% | |
| AGGGGTCGGATCCAGGAGGA+CGG | - | chr7_1:52645925-52645944 | None:intergenic | 65.0% | |
| AATAGGGAGGAGGGGCGGAG+GGG | - | chr7_1:52645943-52645962 | None:intergenic | 65.0% | |
| GTAATAGGGAGGAGGGGCGG+AGG | - | chr7_1:52645945-52645964 | None:intergenic | 65.0% | |
| !! | CGATGGCGGGGGTAAGGGTT+AGG | - | chr7_1:52645886-52645905 | None:intergenic | 65.0% |
| !! | GGAAACCGATGGCGGGGGTA+AGG | - | chr7_1:52645892-52645911 | None:intergenic | 65.0% |
| ! | GTGAGGGAAACCGATGGCGG+GGG | - | chr7_1:52645897-52645916 | None:intergenic | 65.0% |
| GGTGAGGGAAACCGATGGCG+GGG | - | chr7_1:52645898-52645917 | None:intergenic | 65.0% | |
| GGGTGAGGGAAACCGATGGC+GGG | - | chr7_1:52645899-52645918 | None:intergenic | 65.0% | |
| GGGGTGAGGGAAACCGATGG+CGG | - | chr7_1:52645900-52645919 | None:intergenic | 65.0% | |
| GTCGGGGTGAGGGAAACCGA+TGG | - | chr7_1:52645903-52645922 | None:intergenic | 65.0% | |
| TCGGATCCAGGAGGACGGTC+GGG | - | chr7_1:52645920-52645939 | None:intergenic | 65.0% | |
| GTCGGATCCAGGAGGACGGT+CGG | - | chr7_1:52645921-52645940 | None:intergenic | 65.0% | |
| AGGGGTCGGATCCAGGAGGA+CGG | - | chr7_1:52645925-52645944 | None:intergenic | 65.0% | |
| AATAGGGAGGAGGGGCGGAG+GGG | - | chr7_1:52645943-52645962 | None:intergenic | 65.0% | |
| GTAATAGGGAGGAGGGGCGG+AGG | - | chr7_1:52645945-52645964 | None:intergenic | 65.0% | |
| CGGAGGAGGGTGGCCGAAGT+AGG | - | chr7_1:52645802-52645821 | None:intergenic | 70.0% | |
| ATTGCGGCGACGGCGGAGGA+GGG | - | chr7_1:52645815-52645834 | None:intergenic | 70.0% | |
| AAGGATTGCGGCGACGGCGG+AGG | - | chr7_1:52645819-52645838 | None:intergenic | 70.0% | |
| CAGGAGGACGGTCGGGGTGA+GGG | - | chr7_1:52645913-52645932 | None:intergenic | 70.0% | |
| CGGATCCAGGAGGACGGTCG+GGG | - | chr7_1:52645919-52645938 | None:intergenic | 70.0% | |
| CGGAGGAGGGTGGCCGAAGT+AGG | - | chr7_1:52645802-52645821 | None:intergenic | 70.0% | |
| ATTGCGGCGACGGCGGAGGA+GGG | - | chr7_1:52645815-52645834 | None:intergenic | 70.0% | |
| AAGGATTGCGGCGACGGCGG+AGG | - | chr7_1:52645819-52645838 | None:intergenic | 70.0% | |
| CAGGAGGACGGTCGGGGTGA+GGG | - | chr7_1:52645913-52645932 | None:intergenic | 70.0% | |
| CGGATCCAGGAGGACGGTCG+GGG | - | chr7_1:52645919-52645938 | None:intergenic | 70.0% | |
| GATTGCGGCGACGGCGGAGG+AGG | - | chr7_1:52645816-52645835 | None:intergenic | 75.0% | |
| CCAGGAGGACGGTCGGGGTG+AGG | - | chr7_1:52645914-52645933 | None:intergenic | 75.0% | |
| CCTCACCCCGACCGTCCTCC+TGG | + | chr7_1:52645911-52645930 | Msa1024130:intron | 75.0% | |
| GCGGAGGGGTCGGATCCAGG+AGG | - | chr7_1:52645929-52645948 | None:intergenic | 75.0% | |
| GATTGCGGCGACGGCGGAGG+AGG | - | chr7_1:52645816-52645835 | None:intergenic | 75.0% | |
| CCAGGAGGACGGTCGGGGTG+AGG | - | chr7_1:52645914-52645933 | None:intergenic | 75.0% | |
| CCTCACCCCGACCGTCCTCC+TGG | + | chr7_1:52645911-52645930 | Msa1024130:intron | 75.0% | |
| GCGGAGGGGTCGGATCCAGG+AGG | - | chr7_1:52645929-52645948 | None:intergenic | 75.0% | |
| ! | GGGGCGGAGGGGTCGGATCC+AGG | - | chr7_1:52645932-52645951 | None:intergenic | 80.0% |
| ! | GGGAGGAGGGGCGGAGGGGT+CGG | - | chr7_1:52645939-52645958 | None:intergenic | 80.0% |
| ! | GGGGCGGAGGGGTCGGATCC+AGG | - | chr7_1:52645932-52645951 | None:intergenic | 80.0% |
| ! | GGGAGGAGGGGCGGAGGGGT+CGG | - | chr7_1:52645939-52645958 | None:intergenic | 80.0% |
| ! | GCGGCGACGGCGGAGGAGGG+TGG | - | chr7_1:52645812-52645831 | None:intergenic | 85.0% |
| ! | GCGGCGACGGCGGAGGAGGG+TGG | - | chr7_1:52645812-52645831 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 52645701 | 52647994 | 52645701 | ID=Msa1024130;Name=Msa1024130 |
| chr7_1 | mRNA | 52645701 | 52647994 | 52645701 | ID=Msa1024130-mRNA-1;Parent=Msa1024130;Name=Msa1024130-mRNA-1;_AED=0.39;_eAED=0.60;_QI=0|0|0|1|1|1|2|0|145 |
| chr7_1 | exon | 52645701 | 52645905 | 52645701 | ID=Msa1024130-mRNA-1:exon:10460;Parent=Msa1024130-mRNA-1 |
| chr7_1 | exon | 52647762 | 52647994 | 52647762 | ID=Msa1024130-mRNA-1:exon:10461;Parent=Msa1024130-mRNA-1 |
| chr7_1 | CDS | 52645701 | 52645905 | 52645701 | ID=Msa1024130-mRNA-1:cds;Parent=Msa1024130-mRNA-1 |
| chr7_1 | CDS | 52647762 | 52647994 | 52647762 | ID=Msa1024130-mRNA-1:cds;Parent=Msa1024130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
