Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107960 | RHN71890.1 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 8.51e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107960 | sp|Q9SJT8|SRS3_ARATH | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 3.13e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107960 | A0A396J239 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 4.07e-34 | 127 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1107960 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000200 | Msa1107960 | 0.909915 | 3.355575e-82 | -8.615850e-47 |
| Msa0006610 | Msa1107960 | 0.871232 | 7.991392e-67 | -8.615850e-47 |
| Msa0022690 | Msa1107960 | 0.937576 | 2.767287e-98 | -8.615850e-47 |
| Msa0033630 | Msa1107960 | 0.913036 | 9.794427e-84 | -8.615850e-47 |
| Msa1024130 | Msa1107960 | 0.983825 | 8.219516e-159 | -8.615850e-47 |
| Msa1107960 | Msa1140180 | 0.827375 | 1.619537e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107960 | MtrunA17_Chr2g0281741 | 41.848 | 184 | 36 | 3 | 1 | 113 | 1 | 184 | 7.83e-38 | 127 |
| Msa1107960 | MtrunA17_Chr4g0023901 | 96.364 | 55 | 2 | 0 | 1 | 55 | 1 | 55 | 1.30e-32 | 109 |
| Msa1107960 | MtrunA17_Chr4g0035591 | 86.792 | 53 | 7 | 0 | 68 | 120 | 9 | 61 | 8.24e-30 | 107 |
| Msa1107960 | MtrunA17_Chr0c01g0489181 | 86.957 | 46 | 6 | 0 | 68 | 113 | 56 | 101 | 1.17e-25 | 94.0 |
| Msa1107960 | MtrunA17_Chr8g0372461 | 50.000 | 60 | 30 | 0 | 61 | 120 | 103 | 162 | 2.48e-18 | 79.3 |
| Msa1107960 | MtrunA17_Chr8g0353111 | 55.932 | 59 | 22 | 1 | 68 | 122 | 113 | 171 | 3.72e-17 | 76.3 |
| Msa1107960 | MtrunA17_Chr3g0142171 | 60.000 | 45 | 18 | 0 | 76 | 120 | 83 | 127 | 6.21e-17 | 75.1 |
| Msa1107960 | MtrunA17_Chr1g0155791 | 50.820 | 61 | 30 | 0 | 60 | 120 | 103 | 163 | 2.17e-16 | 74.3 |
| Msa1107960 | MtrunA17_Chr5g0404781 | 63.415 | 41 | 15 | 0 | 77 | 117 | 98 | 138 | 4.52e-16 | 73.2 |
| Msa1107960 | MtrunA17_Chr5g0441921 | 64.286 | 42 | 15 | 0 | 79 | 120 | 124 | 165 | 9.08e-16 | 72.4 |
| Msa1107960 | MtrunA17_Chr3g0082511 | 56.000 | 50 | 21 | 1 | 79 | 128 | 134 | 182 | 1.63e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107960 | AT2G21400.3 | 64.583 | 48 | 17 | 0 | 73 | 120 | 4 | 51 | 2.96e-19 | 79.7 |
| Msa1107960 | AT2G21400.1 | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 3.18e-19 | 79.3 |
| Msa1107960 | AT2G21400.2 | 64.583 | 48 | 17 | 0 | 73 | 120 | 4 | 51 | 4.20e-19 | 79.7 |
| Msa1107960 | AT2G21400.4 | 64.583 | 48 | 17 | 0 | 73 | 120 | 3 | 50 | 4.72e-19 | 79.3 |
| Msa1107960 | AT1G75520.1 | 48.438 | 64 | 31 | 1 | 59 | 120 | 103 | 166 | 4.70e-17 | 76.6 |
| Msa1107960 | AT3G51060.1 | 61.364 | 44 | 17 | 0 | 77 | 120 | 142 | 185 | 7.99e-17 | 75.9 |
| Msa1107960 | AT4G36260.1 | 54.717 | 53 | 23 | 1 | 77 | 129 | 92 | 143 | 1.59e-16 | 74.7 |
| Msa1107960 | AT5G33210.2 | 59.091 | 44 | 18 | 0 | 77 | 120 | 15 | 58 | 4.02e-16 | 69.7 |
| Msa1107960 | AT5G66350.3 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 4.22e-16 | 73.6 |
| Msa1107960 | AT5G66350.2 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 5.49e-16 | 73.6 |
| Msa1107960 | AT5G66350.1 | 50.877 | 57 | 27 | 1 | 79 | 135 | 120 | 175 | 5.61e-16 | 73.6 |
| Msa1107960 | AT5G33210.1 | 59.091 | 44 | 18 | 0 | 77 | 120 | 50 | 93 | 2.28e-15 | 69.3 |
| Msa1107960 | AT1G19790.2 | 50.000 | 56 | 26 | 1 | 67 | 120 | 105 | 160 | 3.99e-15 | 71.2 |
| Msa1107960 | AT1G19790.1 | 50.000 | 56 | 26 | 1 | 67 | 120 | 105 | 160 | 3.99e-15 | 71.2 |
| Msa1107960 | AT5G12330.3 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 1.89e-14 | 68.2 |
| Msa1107960 | AT5G12330.4 | 59.524 | 42 | 17 | 0 | 79 | 120 | 199 | 240 | 4.17e-14 | 68.6 |
| Msa1107960 | AT5G12330.1 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 4.52e-14 | 68.2 |
| Msa1107960 | AT5G12330.2 | 59.524 | 42 | 17 | 0 | 79 | 120 | 112 | 153 | 4.52e-14 | 68.2 |
| Msa1107960 | AT3G54430.1 | 53.191 | 47 | 17 | 1 | 70 | 116 | 37 | 78 | 1.07e-13 | 65.1 |
| Msa1107960 | AT2G18120.1 | 44.828 | 58 | 32 | 0 | 77 | 134 | 70 | 127 | 1.25e-13 | 65.9 |
| Msa1107960 | AT2G18120.2 | 44.828 | 58 | 32 | 0 | 77 | 134 | 70 | 127 | 1.38e-13 | 65.5 |
Find 41 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTGTTTGGTGGAAGTT+GGG | 0.310395 | 7_3:-50400593 | None:intergenic |
| ATTGTTTGTTTGGTGGAAGT+TGG | 0.347178 | 7_3:-50400594 | None:intergenic |
| ATGCACAATCCTTCTTTGAT+TGG | 0.363056 | 7_3:-50402652 | None:intergenic |
| TTCGGTCATGATTGTTTGTT+TGG | 0.366531 | 7_3:-50400604 | None:intergenic |
| TAAGGGTTAGGGTGAAGAGG+TGG | 0.375340 | 7_3:-50400715 | None:intergenic |
| ACCGATCTGGAGTGAATTCA+TGG | 0.400497 | 7_3:-50400543 | None:intergenic |
| GGATTTGAGTTTGCCGTGTT+CGG | 0.412366 | 7_3:-50400622 | None:intergenic |
| GGTGAGGGAAACCGATGGCG+GGG | 0.413789 | 7_3:-50400739 | None:intergenic |
| GATTGCGGCGACGGCGGAGG+AGG | 0.416666 | 7_3:-50400657 | None:intergenic |
| AGGGTGAAGAGGTGGGAAAT+TGG | 0.418104 | 7_3:-50400707 | None:intergenic |
| GGGTGAGGGAAACCGATGGC+GGG | 0.424253 | 7_3:-50400740 | None:intergenic |
| TGTTTGTTTGGTGGAAGTTG+GGG | 0.425035 | 7_3:-50400592 | None:intergenic |
| AACGAAGCCACTCACCGATC+TGG | 0.446314 | 7_3:-50400556 | None:intergenic |
| GGGGTGAGGGAAACCGATGG+CGG | 0.446566 | 7_3:-50400741 | None:intergenic |
| GGGTAAGGGTTAGGGTGAAG+AGG | 0.448412 | 7_3:-50400718 | None:intergenic |
| TCCTGCTGATAGAAAATTAG+TGG | 0.464493 | 7_3:+50402745 | Msa1107960:CDS |
| GTGAGGGAAACCGATGGCGG+GGG | 0.471021 | 7_3:-50400738 | None:intergenic |
| CGGAGGAGGGTGGCCGAAGT+AGG | 0.477759 | 7_3:-50400643 | None:intergenic |
| GGTTGAAAGGATTGCGGCGA+CGG | 0.493819 | 7_3:-50400666 | None:intergenic |
| AAGGATTGCGGCGACGGCGG+AGG | 0.507727 | 7_3:-50400660 | None:intergenic |
| GAATCTTCAATCTCGATACA+TGG | 0.513961 | 7_3:-50402809 | None:intergenic |
| AAGGGTTAGGGTGAAGAGGT+GGG | 0.523980 | 7_3:-50400714 | None:intergenic |
| GCGGCGACGGCGGAGGAGGG+TGG | 0.525558 | 7_3:-50400653 | None:intergenic |
| GTTTGTTTGGTGGAAGTTGG+GGG | 0.531733 | 7_3:-50400591 | None:intergenic |
| GGTCATGATTGTTTGTTTGG+TGG | 0.539968 | 7_3:-50400601 | None:intergenic |
| CTCGTACTGAGGAGGTTGAA+AGG | 0.548056 | 7_3:-50400679 | None:intergenic |
| ATTGCGGCGACGGCGGAGGA+GGG | 0.550016 | 7_3:-50400656 | None:intergenic |
| CTGTGGGAACCAATCAAAGA+AGG | 0.552569 | 7_3:+50402643 | Msa1107960:CDS |
| GTCTAAAATGTCAAGACTGT+GGG | 0.562102 | 7_3:+50402627 | Msa1107960:CDS |
| CAAACAATCATGACCGAACA+CGG | 0.568465 | 7_3:+50400609 | Msa1107960:CDS |
| GGCAAACTCAAATCCTACTT+CGG | 0.572114 | 7_3:+50400630 | Msa1107960:CDS |
| AAGTGCTTCTGATATGTGTA+TGG | 0.578912 | 7_3:-50402718 | None:intergenic |
| TGAAAGGATTGCGGCGACGG+CGG | 0.584093 | 7_3:-50400663 | None:intergenic |
| AAAGATCTGAAATGCATCCA+CGG | 0.607375 | 7_3:+50402771 | Msa1107960:CDS |
| GGTCTAAAATGTCAAGACTG+TGG | 0.611012 | 7_3:+50402626 | Msa1107960:CDS |
| AATTGGAAAGACTCGTACTG+AGG | 0.630700 | 7_3:-50400690 | None:intergenic |
| ATACACATATCAGAAGCACT+TGG | 0.637813 | 7_3:+50402720 | Msa1107960:CDS |
| TCCATGAATTCACTCCAGAT+CGG | 0.641820 | 7_3:+50400542 | None:intergenic |
| TGGAAAGACTCGTACTGAGG+AGG | 0.658466 | 7_3:-50400687 | None:intergenic |
| TGAGGAGGTTGAAAGGATTG+CGG | 0.659256 | 7_3:-50400672 | None:intergenic |
| ATTCACTCCAGATCGGTGAG+TGG | 0.692086 | 7_3:+50400549 | Msa1107960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGAAATTTAATGATTT+TGG | + | chr7_3:50401009-50401028 | Msa1107960:intron | 10.0% |
| !!! | TTTAGAAATTTAATGATTTT+GGG | + | chr7_3:50401010-50401029 | Msa1107960:intron | 10.0% |
| !! | ATATAATCTATGATAAATAA+AGG | - | chr7_3:50402022-50402041 | None:intergenic | 10.0% |
| !!! | ATTTAGAAATTTAATGATTT+TGG | + | chr7_3:50401009-50401028 | Msa1107960:intron | 10.0% |
| !!! | TTTAGAAATTTAATGATTTT+GGG | + | chr7_3:50401010-50401029 | Msa1107960:intron | 10.0% |
| !! | ATATAATCTATGATAAATAA+AGG | - | chr7_3:50402022-50402041 | None:intergenic | 10.0% |
| !! | GTATATTTATCTTATTGTAA+TGG | + | chr7_3:50401169-50401188 | Msa1107960:intron | 15.0% |
| !!! | ACTTTTTAAGTTTATATAAG+TGG | - | chr7_3:50401346-50401365 | None:intergenic | 15.0% |
| !! | AAAATTATAAATTTACAGCA+TGG | - | chr7_3:50402402-50402421 | None:intergenic | 15.0% |
| !! | GTATATTTATCTTATTGTAA+TGG | + | chr7_3:50401169-50401188 | Msa1107960:intron | 15.0% |
| !!! | ACTTTTTAAGTTTATATAAG+TGG | - | chr7_3:50401346-50401365 | None:intergenic | 15.0% |
| !! | AAAATTATAAATTTACAGCA+TGG | - | chr7_3:50402402-50402421 | None:intergenic | 15.0% |
| !!! | GAGATTTTGTTATTTTTTGT+TGG | + | chr7_3:50401070-50401089 | Msa1107960:intron | 20.0% |
| !!! | TTTTAAGTTTATATAAGTGG+AGG | - | chr7_3:50401343-50401362 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTAGGAAAATATT+TGG | + | chr7_3:50401645-50401664 | Msa1107960:intron | 20.0% |
| !! | ACATATTATTCCAATACTAA+AGG | - | chr7_3:50401791-50401810 | None:intergenic | 20.0% |
| !! | ACAAAATGGTAAAACAAAAT+TGG | - | chr7_3:50401853-50401872 | None:intergenic | 20.0% |
| !! | AAATGTAGAAAATTTGGATT+TGG | + | chr7_3:50401885-50401904 | Msa1107960:intron | 20.0% |
| !!! | CTATAACATTTAACTTGATA+TGG | - | chr7_3:50402090-50402109 | None:intergenic | 20.0% |
| !! | CATATCAAGTTAAATGTTAT+AGG | + | chr7_3:50402088-50402107 | Msa1107960:intron | 20.0% |
| !! | AATTTAAAAGAATTACCAAC+AGG | - | chr7_3:50402155-50402174 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTAGGAAATTTA+TGG | + | chr7_3:50402269-50402288 | Msa1107960:intron | 20.0% |
| !!! | TTTATGAGTTTAAAACCTTT+TGG | - | chr7_3:50402528-50402547 | None:intergenic | 20.0% |
| !!! | GAGATTTTGTTATTTTTTGT+TGG | + | chr7_3:50401070-50401089 | Msa1107960:intron | 20.0% |
| !!! | TTTTAAGTTTATATAAGTGG+AGG | - | chr7_3:50401343-50401362 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTAGGAAAATATT+TGG | + | chr7_3:50401645-50401664 | Msa1107960:intron | 20.0% |
| !! | ACATATTATTCCAATACTAA+AGG | - | chr7_3:50401791-50401810 | None:intergenic | 20.0% |
| !! | ACAAAATGGTAAAACAAAAT+TGG | - | chr7_3:50401853-50401872 | None:intergenic | 20.0% |
| !! | AAATGTAGAAAATTTGGATT+TGG | + | chr7_3:50401885-50401904 | Msa1107960:intron | 20.0% |
| !!! | CTATAACATTTAACTTGATA+TGG | - | chr7_3:50402090-50402109 | None:intergenic | 20.0% |
| !! | CATATCAAGTTAAATGTTAT+AGG | + | chr7_3:50402088-50402107 | Msa1107960:intron | 20.0% |
| !! | AATTTAAAAGAATTACCAAC+AGG | - | chr7_3:50402155-50402174 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTAGGAAATTTA+TGG | + | chr7_3:50402269-50402288 | Msa1107960:intron | 20.0% |
| !!! | TTTATGAGTTTAAAACCTTT+TGG | - | chr7_3:50402528-50402547 | None:intergenic | 20.0% |
| ! | ACAAAATCTCCAAACAAAAA+GGG | - | chr7_3:50401060-50401079 | None:intergenic | 25.0% |
| ! | AACAAAATCTCCAAACAAAA+AGG | - | chr7_3:50401061-50401080 | None:intergenic | 25.0% |
| ! | GGTTTATACTTATCTAATCT+TGG | + | chr7_3:50401091-50401110 | Msa1107960:intron | 25.0% |
| !!! | GAGTTCTTTTTTGAATTCTT+AGG | + | chr7_3:50401292-50401311 | Msa1107960:intron | 25.0% |
| ! | TATTGTACTTTCAATTATGC+AGG | + | chr7_3:50401426-50401445 | Msa1107960:intron | 25.0% |
| ! | TTTCAATTATGCAGGATTTA+GGG | + | chr7_3:50401434-50401453 | Msa1107960:intron | 25.0% |
| ! | TGCTACTGTTCTATATAATA+AGG | + | chr7_3:50401540-50401559 | Msa1107960:intron | 25.0% |
| !! | TACAATCTATCATTCCTTTT+AGG | + | chr7_3:50401613-50401632 | Msa1107960:intron | 25.0% |
| ! | TAGAAAATTTGGATTTGGAT+TGG | + | chr7_3:50401890-50401909 | Msa1107960:intron | 25.0% |
| ! | TGATTTAAACTAACTTCAGT+TGG | + | chr7_3:50402047-50402066 | Msa1107960:intron | 25.0% |
| ! | ACATGTCAATTTAAGTAGTT+AGG | + | chr7_3:50402259-50402278 | Msa1107960:intron | 25.0% |
| ! | TATAAGGGAAACTAAATTCA+AGG | - | chr7_3:50402367-50402386 | None:intergenic | 25.0% |
| !! | GAATTTAGTTTCCCTTATAA+TGG | + | chr7_3:50402368-50402387 | Msa1107960:intron | 25.0% |
| ! | AAAATGTATTCAACCCAATT+AGG | + | chr7_3:50402584-50402603 | Msa1107960:intron | 25.0% |
| ! | AAATGTATTCAACCCAATTA+GGG | + | chr7_3:50402585-50402604 | Msa1107960:intron | 25.0% |
| ! | ACAAAATCTCCAAACAAAAA+GGG | - | chr7_3:50401060-50401079 | None:intergenic | 25.0% |
| ! | AACAAAATCTCCAAACAAAA+AGG | - | chr7_3:50401061-50401080 | None:intergenic | 25.0% |
| ! | GGTTTATACTTATCTAATCT+TGG | + | chr7_3:50401091-50401110 | Msa1107960:intron | 25.0% |
| !!! | GAGTTCTTTTTTGAATTCTT+AGG | + | chr7_3:50401292-50401311 | Msa1107960:intron | 25.0% |
| ! | TATTGTACTTTCAATTATGC+AGG | + | chr7_3:50401426-50401445 | Msa1107960:intron | 25.0% |
| ! | TTTCAATTATGCAGGATTTA+GGG | + | chr7_3:50401434-50401453 | Msa1107960:intron | 25.0% |
| ! | TGCTACTGTTCTATATAATA+AGG | + | chr7_3:50401540-50401559 | Msa1107960:intron | 25.0% |
| !! | TACAATCTATCATTCCTTTT+AGG | + | chr7_3:50401613-50401632 | Msa1107960:intron | 25.0% |
| ! | TAGAAAATTTGGATTTGGAT+TGG | + | chr7_3:50401890-50401909 | Msa1107960:intron | 25.0% |
| ! | TGATTTAAACTAACTTCAGT+TGG | + | chr7_3:50402047-50402066 | Msa1107960:intron | 25.0% |
| ! | ACATGTCAATTTAAGTAGTT+AGG | + | chr7_3:50402259-50402278 | Msa1107960:intron | 25.0% |
| ! | TATAAGGGAAACTAAATTCA+AGG | - | chr7_3:50402367-50402386 | None:intergenic | 25.0% |
| !! | GAATTTAGTTTCCCTTATAA+TGG | + | chr7_3:50402368-50402387 | Msa1107960:intron | 25.0% |
| ! | AAAATGTATTCAACCCAATT+AGG | + | chr7_3:50402584-50402603 | Msa1107960:intron | 25.0% |
| ! | AAATGTATTCAACCCAATTA+GGG | + | chr7_3:50402585-50402604 | Msa1107960:intron | 25.0% |
| TAGTAGCCATAACTGTAATA+GGG | - | chr7_3:50400803-50400822 | None:intergenic | 30.0% | |
| TTAGTAGCCATAACTGTAAT+AGG | - | chr7_3:50400804-50400823 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGCAAGAAGA+AGG | - | chr7_3:50400845-50400864 | None:intergenic | 30.0% | |
| ! | TTATAGCTTATTTCTTCCAC+TGG | + | chr7_3:50400872-50400891 | Msa1107960:intron | 30.0% |
| ! | TATAGCTTATTTCTTCCACT+GGG | + | chr7_3:50400873-50400892 | Msa1107960:intron | 30.0% |
| GTTTATATAAGTGGAGGAAT+TGG | - | chr7_3:50401337-50401356 | None:intergenic | 30.0% | |
| ATAGAACTTTCTAAGTCAGA+AGG | - | chr7_3:50401409-50401428 | None:intergenic | 30.0% | |
| CTTTCAATTATGCAGGATTT+AGG | + | chr7_3:50401433-50401452 | Msa1107960:intron | 30.0% | |
| AAGGAATGATAGATTGTACT+TGG | - | chr7_3:50401611-50401630 | None:intergenic | 30.0% | |
| !! | ATCTATCATTCCTTTTAGGT+TGG | + | chr7_3:50401617-50401636 | Msa1107960:intron | 30.0% |
| AACATTATAGCCAACCTAAA+AGG | - | chr7_3:50401630-50401649 | None:intergenic | 30.0% | |
| ! | TGATTGACACTTGAGTATTT+TGG | + | chr7_3:50401679-50401698 | Msa1107960:intron | 30.0% |
| GAGAAAGATTTGAAAAAGAG+AGG | + | chr7_3:50401701-50401720 | Msa1107960:intron | 30.0% | |
| GACTGATAAGTATTAGAACT+TGG | + | chr7_3:50401734-50401753 | Msa1107960:intron | 30.0% | |
| TTGGAAAGTGACAACATAAA+AGG | - | chr7_3:50401834-50401853 | None:intergenic | 30.0% | |
| GGTGTCAAATGTAGAAAATT+TGG | + | chr7_3:50401879-50401898 | Msa1107960:intron | 30.0% | |
| AATTGAGCATAGAGAAACAA+AGG | - | chr7_3:50402119-50402138 | None:intergenic | 30.0% | |
| TGAGATGCATATATAACCAT+TGG | - | chr7_3:50402231-50402250 | None:intergenic | 30.0% | |
| TACTATATCCTCTATGTGAT+GGG | - | chr7_3:50402489-50402508 | None:intergenic | 30.0% | |
| ATACTATATCCTCTATGTGA+TGG | - | chr7_3:50402490-50402509 | None:intergenic | 30.0% | |
| !! | TTTAAAACCTTTTGGTCGTA+TGG | - | chr7_3:50402520-50402539 | None:intergenic | 30.0% |
| AATGTATTCAACCCAATTAG+GGG | + | chr7_3:50402586-50402605 | Msa1107960:intron | 30.0% | |
| TAGTAGCCATAACTGTAATA+GGG | - | chr7_3:50400803-50400822 | None:intergenic | 30.0% | |
| TTAGTAGCCATAACTGTAAT+AGG | - | chr7_3:50400804-50400823 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGCAAGAAGA+AGG | - | chr7_3:50400845-50400864 | None:intergenic | 30.0% | |
| ! | TTATAGCTTATTTCTTCCAC+TGG | + | chr7_3:50400872-50400891 | Msa1107960:intron | 30.0% |
| ! | TATAGCTTATTTCTTCCACT+GGG | + | chr7_3:50400873-50400892 | Msa1107960:intron | 30.0% |
| GTTTATATAAGTGGAGGAAT+TGG | - | chr7_3:50401337-50401356 | None:intergenic | 30.0% | |
| ATAGAACTTTCTAAGTCAGA+AGG | - | chr7_3:50401409-50401428 | None:intergenic | 30.0% | |
| CTTTCAATTATGCAGGATTT+AGG | + | chr7_3:50401433-50401452 | Msa1107960:intron | 30.0% | |
| AAGGAATGATAGATTGTACT+TGG | - | chr7_3:50401611-50401630 | None:intergenic | 30.0% | |
| !! | ATCTATCATTCCTTTTAGGT+TGG | + | chr7_3:50401617-50401636 | Msa1107960:intron | 30.0% |
| AACATTATAGCCAACCTAAA+AGG | - | chr7_3:50401630-50401649 | None:intergenic | 30.0% | |
| ! | TGATTGACACTTGAGTATTT+TGG | + | chr7_3:50401679-50401698 | Msa1107960:intron | 30.0% |
| GAGAAAGATTTGAAAAAGAG+AGG | + | chr7_3:50401701-50401720 | Msa1107960:intron | 30.0% | |
| GACTGATAAGTATTAGAACT+TGG | + | chr7_3:50401734-50401753 | Msa1107960:intron | 30.0% | |
| TTGGAAAGTGACAACATAAA+AGG | - | chr7_3:50401834-50401853 | None:intergenic | 30.0% | |
| GGTGTCAAATGTAGAAAATT+TGG | + | chr7_3:50401879-50401898 | Msa1107960:intron | 30.0% | |
| AATTGAGCATAGAGAAACAA+AGG | - | chr7_3:50402119-50402138 | None:intergenic | 30.0% | |
| TGAGATGCATATATAACCAT+TGG | - | chr7_3:50402231-50402250 | None:intergenic | 30.0% | |
| TACTATATCCTCTATGTGAT+GGG | - | chr7_3:50402489-50402508 | None:intergenic | 30.0% | |
| ATACTATATCCTCTATGTGA+TGG | - | chr7_3:50402490-50402509 | None:intergenic | 30.0% | |
| !! | TTTAAAACCTTTTGGTCGTA+TGG | - | chr7_3:50402520-50402539 | None:intergenic | 30.0% |
| AATGTATTCAACCCAATTAG+GGG | + | chr7_3:50402586-50402605 | Msa1107960:intron | 30.0% | |
| ! | TTGTTTGTTTGGTGGAAGTT+GGG | - | chr7_3:50400596-50400615 | None:intergenic | 35.0% |
| ! | ATTGTTTGTTTGGTGGAAGT+TGG | - | chr7_3:50400597-50400616 | None:intergenic | 35.0% |
| TTCGGTCATGATTGTTTGTT+TGG | - | chr7_3:50400607-50400626 | None:intergenic | 35.0% | |
| !! | TATGGCTACTAAGCTTTTTC+TGG | + | chr7_3:50400812-50400831 | Msa1107960:intron | 35.0% |
| !!! | TATTTTGATGAGCTCTGTGA+CGG | + | chr7_3:50400977-50400996 | Msa1107960:intron | 35.0% |
| ! | ATGCATCTTCCCTTTTTGTT+TGG | + | chr7_3:50401048-50401067 | Msa1107960:intron | 35.0% |
| CCAAGATATCAACAACAAAG+AGG | - | chr7_3:50401147-50401166 | None:intergenic | 35.0% | |
| !! | CCTCTTTGTTGTTGATATCT+TGG | + | chr7_3:50401144-50401163 | Msa1107960:intron | 35.0% |
| !! | GGTTGGCTATAATGTTTTGT+AGG | + | chr7_3:50401634-50401653 | Msa1107960:intron | 35.0% |
| TTAGAACTTGGAACGAGATT+TGG | + | chr7_3:50401746-50401765 | Msa1107960:intron | 35.0% | |
| CAGTTCATCACCTTTAGTAT+TGG | + | chr7_3:50401778-50401797 | Msa1107960:intron | 35.0% | |
| AAGTGACAACATAAAAGGCA+TGG | - | chr7_3:50401829-50401848 | None:intergenic | 35.0% | |
| ! | GTTTTACCATTTTGTGCAGA+AGG | + | chr7_3:50401858-50401877 | Msa1107960:intron | 35.0% |
| AACTTCAGTTGGATCATGTA+AGG | + | chr7_3:50402058-50402077 | Msa1107960:intron | 35.0% | |
| TTGACTCAAATATCTCCTGT+TGG | + | chr7_3:50402137-50402156 | Msa1107960:intron | 35.0% | |
| CTTTGTCAGTTACAAACCAA+TGG | + | chr7_3:50402212-50402231 | Msa1107960:intron | 35.0% | |
| CCAATTACACAGTTATCGTA+CGG | + | chr7_3:50402298-50402317 | Msa1107960:intron | 35.0% | |
| ! | CTTTTATTCCCATCACATAG+AGG | + | chr7_3:50402478-50402497 | Msa1107960:intron | 35.0% |
| ATGTATTCAACCCAATTAGG+GGG | + | chr7_3:50402587-50402606 | Msa1107960:intron | 35.0% | |
| ! | GTCTAAAATGTCAAGACTGT+GGG | + | chr7_3:50402627-50402646 | Msa1107960:CDS | 35.0% |
| ATGCACAATCCTTCTTTGAT+TGG | - | chr7_3:50402655-50402674 | None:intergenic | 35.0% | |
| AAGTGCTTCTGATATGTGTA+TGG | - | chr7_3:50402721-50402740 | None:intergenic | 35.0% | |
| !! | ATACACATATCAGAAGCACT+TGG | + | chr7_3:50402720-50402739 | Msa1107960:CDS | 35.0% |
| TCCTGCTGATAGAAAATTAG+TGG | + | chr7_3:50402745-50402764 | Msa1107960:CDS | 35.0% | |
| ! | TCCACTAATTTTCTATCAGC+AGG | - | chr7_3:50402749-50402768 | None:intergenic | 35.0% |
| ! | AAAGATCTGAAATGCATCCA+CGG | + | chr7_3:50402771-50402790 | Msa1107960:CDS | 35.0% |
| ! | ATCTCGATACATGGCATTTT+AGG | - | chr7_3:50402803-50402822 | None:intergenic | 35.0% |
| GAATCTTCAATCTCGATACA+TGG | - | chr7_3:50402812-50402831 | None:intergenic | 35.0% | |
| ! | TTGTTTGTTTGGTGGAAGTT+GGG | - | chr7_3:50400596-50400615 | None:intergenic | 35.0% |
| ! | ATTGTTTGTTTGGTGGAAGT+TGG | - | chr7_3:50400597-50400616 | None:intergenic | 35.0% |
| TTCGGTCATGATTGTTTGTT+TGG | - | chr7_3:50400607-50400626 | None:intergenic | 35.0% | |
| !! | TATGGCTACTAAGCTTTTTC+TGG | + | chr7_3:50400812-50400831 | Msa1107960:intron | 35.0% |
| !!! | TATTTTGATGAGCTCTGTGA+CGG | + | chr7_3:50400977-50400996 | Msa1107960:intron | 35.0% |
| ! | ATGCATCTTCCCTTTTTGTT+TGG | + | chr7_3:50401048-50401067 | Msa1107960:intron | 35.0% |
| CCAAGATATCAACAACAAAG+AGG | - | chr7_3:50401147-50401166 | None:intergenic | 35.0% | |
| !! | CCTCTTTGTTGTTGATATCT+TGG | + | chr7_3:50401144-50401163 | Msa1107960:intron | 35.0% |
| !! | GGTTGGCTATAATGTTTTGT+AGG | + | chr7_3:50401634-50401653 | Msa1107960:intron | 35.0% |
| TTAGAACTTGGAACGAGATT+TGG | + | chr7_3:50401746-50401765 | Msa1107960:intron | 35.0% | |
| CAGTTCATCACCTTTAGTAT+TGG | + | chr7_3:50401778-50401797 | Msa1107960:intron | 35.0% | |
| AAGTGACAACATAAAAGGCA+TGG | - | chr7_3:50401829-50401848 | None:intergenic | 35.0% | |
| ! | GTTTTACCATTTTGTGCAGA+AGG | + | chr7_3:50401858-50401877 | Msa1107960:intron | 35.0% |
| AACTTCAGTTGGATCATGTA+AGG | + | chr7_3:50402058-50402077 | Msa1107960:intron | 35.0% | |
| TTGACTCAAATATCTCCTGT+TGG | + | chr7_3:50402137-50402156 | Msa1107960:intron | 35.0% | |
| CTTTGTCAGTTACAAACCAA+TGG | + | chr7_3:50402212-50402231 | Msa1107960:intron | 35.0% | |
| CCAATTACACAGTTATCGTA+CGG | + | chr7_3:50402298-50402317 | Msa1107960:intron | 35.0% | |
| ! | CTTTTATTCCCATCACATAG+AGG | + | chr7_3:50402478-50402497 | Msa1107960:intron | 35.0% |
| ATGTATTCAACCCAATTAGG+GGG | + | chr7_3:50402587-50402606 | Msa1107960:intron | 35.0% | |
| ! | GTCTAAAATGTCAAGACTGT+GGG | + | chr7_3:50402627-50402646 | Msa1107960:CDS | 35.0% |
| ATGCACAATCCTTCTTTGAT+TGG | - | chr7_3:50402655-50402674 | None:intergenic | 35.0% | |
| AAGTGCTTCTGATATGTGTA+TGG | - | chr7_3:50402721-50402740 | None:intergenic | 35.0% | |
| !! | ATACACATATCAGAAGCACT+TGG | + | chr7_3:50402720-50402739 | Msa1107960:CDS | 35.0% |
| TCCTGCTGATAGAAAATTAG+TGG | + | chr7_3:50402745-50402764 | Msa1107960:CDS | 35.0% | |
| ! | TCCACTAATTTTCTATCAGC+AGG | - | chr7_3:50402749-50402768 | None:intergenic | 35.0% |
| ! | AAAGATCTGAAATGCATCCA+CGG | + | chr7_3:50402771-50402790 | Msa1107960:CDS | 35.0% |
| ! | ATCTCGATACATGGCATTTT+AGG | - | chr7_3:50402803-50402822 | None:intergenic | 35.0% |
| GAATCTTCAATCTCGATACA+TGG | - | chr7_3:50402812-50402831 | None:intergenic | 35.0% | |
| ! | TGTTTGTTTGGTGGAAGTTG+GGG | - | chr7_3:50400595-50400614 | None:intergenic | 40.0% |
| GGTCATGATTGTTTGTTTGG+TGG | - | chr7_3:50400604-50400623 | None:intergenic | 40.0% | |
| CAAACAATCATGACCGAACA+CGG | + | chr7_3:50400609-50400628 | Msa1107960:CDS | 40.0% | |
| GGCAAACTCAAATCCTACTT+CGG | + | chr7_3:50400630-50400649 | Msa1107960:CDS | 40.0% | |
| AATTGGAAAGACTCGTACTG+AGG | - | chr7_3:50400693-50400712 | None:intergenic | 40.0% | |
| ATAACTGTAATAGGGAGGAG+GGG | - | chr7_3:50400795-50400814 | None:intergenic | 40.0% | |
| CATAACTGTAATAGGGAGGA+GGG | - | chr7_3:50400796-50400815 | None:intergenic | 40.0% | |
| TAGCCATAACTGTAATAGGG+AGG | - | chr7_3:50400800-50400819 | None:intergenic | 40.0% | |
| AGCTACAAAACAAAACCCAG+TGG | - | chr7_3:50400891-50400910 | None:intergenic | 40.0% | |
| !! | ATTTTGATGAGCTCTGTGAC+GGG | + | chr7_3:50400978-50400997 | Msa1107960:intron | 40.0% |
| GTACCTTTGATGTAGTTGTG+TGG | + | chr7_3:50401562-50401581 | Msa1107960:intron | 40.0% | |
| GTACCACACAACTACATCAA+AGG | - | chr7_3:50401568-50401587 | None:intergenic | 40.0% | |
| GGACACAAACAGAGTACAAA+AGG | - | chr7_3:50401590-50401609 | None:intergenic | 40.0% | |
| TTGACACCTTCTGCACAAAA+TGG | - | chr7_3:50401867-50401886 | None:intergenic | 40.0% | |
| TGAGCATAGAGAAACAAAGG+AGG | - | chr7_3:50402116-50402135 | None:intergenic | 40.0% | |
| CCGTACGATAACTGTGTAAT+TGG | - | chr7_3:50402301-50402320 | None:intergenic | 40.0% | |
| TGGCAAAGCAGCCATTATAA+GGG | - | chr7_3:50402382-50402401 | None:intergenic | 40.0% | |
| ATGGCAAAGCAGCCATTATA+AGG | - | chr7_3:50402383-50402402 | None:intergenic | 40.0% | |
| AGTAACACCATACGACCAAA+AGG | + | chr7_3:50402510-50402529 | Msa1107960:intron | 40.0% | |
| ! | GGTCTAAAATGTCAAGACTG+TGG | + | chr7_3:50402626-50402645 | Msa1107960:CDS | 40.0% |
| ! | TGTTTGTTTGGTGGAAGTTG+GGG | - | chr7_3:50400595-50400614 | None:intergenic | 40.0% |
| GGTCATGATTGTTTGTTTGG+TGG | - | chr7_3:50400604-50400623 | None:intergenic | 40.0% | |
| CAAACAATCATGACCGAACA+CGG | + | chr7_3:50400609-50400628 | Msa1107960:CDS | 40.0% | |
| GGCAAACTCAAATCCTACTT+CGG | + | chr7_3:50400630-50400649 | Msa1107960:CDS | 40.0% | |
| AATTGGAAAGACTCGTACTG+AGG | - | chr7_3:50400693-50400712 | None:intergenic | 40.0% | |
| ATAACTGTAATAGGGAGGAG+GGG | - | chr7_3:50400795-50400814 | None:intergenic | 40.0% | |
| CATAACTGTAATAGGGAGGA+GGG | - | chr7_3:50400796-50400815 | None:intergenic | 40.0% | |
| TAGCCATAACTGTAATAGGG+AGG | - | chr7_3:50400800-50400819 | None:intergenic | 40.0% | |
| AGCTACAAAACAAAACCCAG+TGG | - | chr7_3:50400891-50400910 | None:intergenic | 40.0% | |
| !! | ATTTTGATGAGCTCTGTGAC+GGG | + | chr7_3:50400978-50400997 | Msa1107960:intron | 40.0% |
| GTACCTTTGATGTAGTTGTG+TGG | + | chr7_3:50401562-50401581 | Msa1107960:intron | 40.0% | |
| GTACCACACAACTACATCAA+AGG | - | chr7_3:50401568-50401587 | None:intergenic | 40.0% | |
| GGACACAAACAGAGTACAAA+AGG | - | chr7_3:50401590-50401609 | None:intergenic | 40.0% | |
| TTGACACCTTCTGCACAAAA+TGG | - | chr7_3:50401867-50401886 | None:intergenic | 40.0% | |
| TGAGCATAGAGAAACAAAGG+AGG | - | chr7_3:50402116-50402135 | None:intergenic | 40.0% | |
| CCGTACGATAACTGTGTAAT+TGG | - | chr7_3:50402301-50402320 | None:intergenic | 40.0% | |
| TGGCAAAGCAGCCATTATAA+GGG | - | chr7_3:50402382-50402401 | None:intergenic | 40.0% | |
| ATGGCAAAGCAGCCATTATA+AGG | - | chr7_3:50402383-50402402 | None:intergenic | 40.0% | |
| AGTAACACCATACGACCAAA+AGG | + | chr7_3:50402510-50402529 | Msa1107960:intron | 40.0% | |
| ! | GGTCTAAAATGTCAAGACTG+TGG | + | chr7_3:50402626-50402645 | Msa1107960:CDS | 40.0% |
| ! | GTTTGTTTGGTGGAAGTTGG+GGG | - | chr7_3:50400594-50400613 | None:intergenic | 45.0% |
| ! | GGATTTGAGTTTGCCGTGTT+CGG | - | chr7_3:50400625-50400644 | None:intergenic | 45.0% |
| TGAGGAGGTTGAAAGGATTG+CGG | - | chr7_3:50400675-50400694 | None:intergenic | 45.0% | |
| CCATAACTGTAATAGGGAGG+AGG | - | chr7_3:50400797-50400816 | None:intergenic | 45.0% | |
| CCTCCTCCCTATTACAGTTA+TGG | + | chr7_3:50400794-50400813 | Msa1107960:intron | 45.0% | |
| CACTTCTTCTCCCCCTAATT+GGG | - | chr7_3:50402600-50402619 | None:intergenic | 45.0% | |
| ACACTTCTTCTCCCCCTAAT+TGG | - | chr7_3:50402601-50402620 | None:intergenic | 45.0% | |
| !! | AGGGGGAGAAGAAGTGTTAA+AGG | + | chr7_3:50402604-50402623 | Msa1107960:intron | 45.0% |
| !! | GGGGGAGAAGAAGTGTTAAA+GGG | + | chr7_3:50402605-50402624 | Msa1107960:intron | 45.0% |
| CTGTGGGAACCAATCAAAGA+AGG | + | chr7_3:50402643-50402662 | Msa1107960:CDS | 45.0% | |
| ! | GTTTGTTTGGTGGAAGTTGG+GGG | - | chr7_3:50400594-50400613 | None:intergenic | 45.0% |
| ! | GGATTTGAGTTTGCCGTGTT+CGG | - | chr7_3:50400625-50400644 | None:intergenic | 45.0% |
| TGAGGAGGTTGAAAGGATTG+CGG | - | chr7_3:50400675-50400694 | None:intergenic | 45.0% | |
| CCATAACTGTAATAGGGAGG+AGG | - | chr7_3:50400797-50400816 | None:intergenic | 45.0% | |
| CCTCCTCCCTATTACAGTTA+TGG | + | chr7_3:50400794-50400813 | Msa1107960:intron | 45.0% | |
| CACTTCTTCTCCCCCTAATT+GGG | - | chr7_3:50402600-50402619 | None:intergenic | 45.0% | |
| ACACTTCTTCTCCCCCTAAT+TGG | - | chr7_3:50402601-50402620 | None:intergenic | 45.0% | |
| !! | AGGGGGAGAAGAAGTGTTAA+AGG | + | chr7_3:50402604-50402623 | Msa1107960:intron | 45.0% |
| !! | GGGGGAGAAGAAGTGTTAAA+GGG | + | chr7_3:50402605-50402624 | Msa1107960:intron | 45.0% |
| CTGTGGGAACCAATCAAAGA+AGG | + | chr7_3:50402643-50402662 | Msa1107960:CDS | 45.0% | |
| ATTCACTCCAGATCGGTGAG+TGG | + | chr7_3:50400549-50400568 | Msa1107960:CDS | 50.0% | |
| TTTGGTGGAAGTTGGGGGTT+AGG | - | chr7_3:50400589-50400608 | None:intergenic | 50.0% | |
| CTCGTACTGAGGAGGTTGAA+AGG | - | chr7_3:50400682-50400701 | None:intergenic | 50.0% | |
| TGGAAAGACTCGTACTGAGG+AGG | - | chr7_3:50400690-50400709 | None:intergenic | 50.0% | |
| AGGGTGAAGAGGTGGGAAAT+TGG | - | chr7_3:50400710-50400729 | None:intergenic | 50.0% | |
| AAGGGTTAGGGTGAAGAGGT+GGG | - | chr7_3:50400717-50400736 | None:intergenic | 50.0% | |
| TAAGGGTTAGGGTGAAGAGG+TGG | - | chr7_3:50400718-50400737 | None:intergenic | 50.0% | |
| ATTCACTCCAGATCGGTGAG+TGG | + | chr7_3:50400549-50400568 | Msa1107960:CDS | 50.0% | |
| TTTGGTGGAAGTTGGGGGTT+AGG | - | chr7_3:50400589-50400608 | None:intergenic | 50.0% | |
| CTCGTACTGAGGAGGTTGAA+AGG | - | chr7_3:50400682-50400701 | None:intergenic | 50.0% | |
| TGGAAAGACTCGTACTGAGG+AGG | - | chr7_3:50400690-50400709 | None:intergenic | 50.0% | |
| AGGGTGAAGAGGTGGGAAAT+TGG | - | chr7_3:50400710-50400729 | None:intergenic | 50.0% | |
| AAGGGTTAGGGTGAAGAGGT+GGG | - | chr7_3:50400717-50400736 | None:intergenic | 50.0% | |
| TAAGGGTTAGGGTGAAGAGG+TGG | - | chr7_3:50400718-50400737 | None:intergenic | 50.0% | |
| AACGAAGCCACTCACCGATC+TGG | - | chr7_3:50400559-50400578 | None:intergenic | 55.0% | |
| GTGGAAGTTGGGGGTTAGGA+GGG | - | chr7_3:50400585-50400604 | None:intergenic | 55.0% | |
| GGTTGAAAGGATTGCGGCGA+CGG | - | chr7_3:50400669-50400688 | None:intergenic | 55.0% | |
| GGGTAAGGGTTAGGGTGAAG+AGG | - | chr7_3:50400721-50400740 | None:intergenic | 55.0% | |
| ACTGTAATAGGGAGGAGGGG+CGG | - | chr7_3:50400792-50400811 | None:intergenic | 55.0% | |
| !!! | GGCATTTTAGGACTCTGCCG+TGG | - | chr7_3:50402791-50402810 | None:intergenic | 55.0% |
| AACGAAGCCACTCACCGATC+TGG | - | chr7_3:50400559-50400578 | None:intergenic | 55.0% | |
| GTGGAAGTTGGGGGTTAGGA+GGG | - | chr7_3:50400585-50400604 | None:intergenic | 55.0% | |
| GGTTGAAAGGATTGCGGCGA+CGG | - | chr7_3:50400669-50400688 | None:intergenic | 55.0% | |
| GGGTAAGGGTTAGGGTGAAG+AGG | - | chr7_3:50400721-50400740 | None:intergenic | 55.0% | |
| ACTGTAATAGGGAGGAGGGG+CGG | - | chr7_3:50400792-50400811 | None:intergenic | 55.0% | |
| !!! | GGCATTTTAGGACTCTGCCG+TGG | - | chr7_3:50402791-50402810 | None:intergenic | 55.0% |
| GGTGGAAGTTGGGGGTTAGG+AGG | - | chr7_3:50400586-50400605 | None:intergenic | 60.0% | |
| TGAAAGGATTGCGGCGACGG+CGG | - | chr7_3:50400666-50400685 | None:intergenic | 60.0% | |
| !! | GATGGCGGGGGTAAGGGTTA+GGG | - | chr7_3:50400729-50400748 | None:intergenic | 60.0% |
| CTAACCCTTACCCCCGCCAT+CGG | + | chr7_3:50400728-50400747 | Msa1107960:CDS | 60.0% | |
| !! | GAAACCGATGGCGGGGGTAA+GGG | - | chr7_3:50400735-50400754 | None:intergenic | 60.0% |
| TAATAGGGAGGAGGGGCGGA+GGG | - | chr7_3:50400788-50400807 | None:intergenic | 60.0% | |
| GGTGGAAGTTGGGGGTTAGG+AGG | - | chr7_3:50400586-50400605 | None:intergenic | 60.0% | |
| TGAAAGGATTGCGGCGACGG+CGG | - | chr7_3:50400666-50400685 | None:intergenic | 60.0% | |
| !! | GATGGCGGGGGTAAGGGTTA+GGG | - | chr7_3:50400729-50400748 | None:intergenic | 60.0% |
| CTAACCCTTACCCCCGCCAT+CGG | + | chr7_3:50400728-50400747 | Msa1107960:CDS | 60.0% | |
| !! | GAAACCGATGGCGGGGGTAA+GGG | - | chr7_3:50400735-50400754 | None:intergenic | 60.0% |
| TAATAGGGAGGAGGGGCGGA+GGG | - | chr7_3:50400788-50400807 | None:intergenic | 60.0% | |
| !! | CGATGGCGGGGGTAAGGGTT+AGG | - | chr7_3:50400730-50400749 | None:intergenic | 65.0% |
| !! | GGAAACCGATGGCGGGGGTA+AGG | - | chr7_3:50400736-50400755 | None:intergenic | 65.0% |
| ! | GTGAGGGAAACCGATGGCGG+GGG | - | chr7_3:50400741-50400760 | None:intergenic | 65.0% |
| GGTGAGGGAAACCGATGGCG+GGG | - | chr7_3:50400742-50400761 | None:intergenic | 65.0% | |
| GGGTGAGGGAAACCGATGGC+GGG | - | chr7_3:50400743-50400762 | None:intergenic | 65.0% | |
| GGGGTGAGGGAAACCGATGG+CGG | - | chr7_3:50400744-50400763 | None:intergenic | 65.0% | |
| GTCGGGGTGAGGGAAACCGA+TGG | - | chr7_3:50400747-50400766 | None:intergenic | 65.0% | |
| TCGGATCCAGGAGGACGGTC+GGG | - | chr7_3:50400764-50400783 | None:intergenic | 65.0% | |
| GTCGGATCCAGGAGGACGGT+CGG | - | chr7_3:50400765-50400784 | None:intergenic | 65.0% | |
| AGGGGTCGGATCCAGGAGGA+CGG | - | chr7_3:50400769-50400788 | None:intergenic | 65.0% | |
| AATAGGGAGGAGGGGCGGAG+GGG | - | chr7_3:50400787-50400806 | None:intergenic | 65.0% | |
| GTAATAGGGAGGAGGGGCGG+AGG | - | chr7_3:50400789-50400808 | None:intergenic | 65.0% | |
| !! | CGATGGCGGGGGTAAGGGTT+AGG | - | chr7_3:50400730-50400749 | None:intergenic | 65.0% |
| !! | GGAAACCGATGGCGGGGGTA+AGG | - | chr7_3:50400736-50400755 | None:intergenic | 65.0% |
| ! | GTGAGGGAAACCGATGGCGG+GGG | - | chr7_3:50400741-50400760 | None:intergenic | 65.0% |
| GGTGAGGGAAACCGATGGCG+GGG | - | chr7_3:50400742-50400761 | None:intergenic | 65.0% | |
| GGGTGAGGGAAACCGATGGC+GGG | - | chr7_3:50400743-50400762 | None:intergenic | 65.0% | |
| GGGGTGAGGGAAACCGATGG+CGG | - | chr7_3:50400744-50400763 | None:intergenic | 65.0% | |
| GTCGGGGTGAGGGAAACCGA+TGG | - | chr7_3:50400747-50400766 | None:intergenic | 65.0% | |
| TCGGATCCAGGAGGACGGTC+GGG | - | chr7_3:50400764-50400783 | None:intergenic | 65.0% | |
| GTCGGATCCAGGAGGACGGT+CGG | - | chr7_3:50400765-50400784 | None:intergenic | 65.0% | |
| AGGGGTCGGATCCAGGAGGA+CGG | - | chr7_3:50400769-50400788 | None:intergenic | 65.0% | |
| AATAGGGAGGAGGGGCGGAG+GGG | - | chr7_3:50400787-50400806 | None:intergenic | 65.0% | |
| GTAATAGGGAGGAGGGGCGG+AGG | - | chr7_3:50400789-50400808 | None:intergenic | 65.0% | |
| CGGAGGAGGGTGGCCGAAGT+AGG | - | chr7_3:50400646-50400665 | None:intergenic | 70.0% | |
| ATTGCGGCGACGGCGGAGGA+GGG | - | chr7_3:50400659-50400678 | None:intergenic | 70.0% | |
| AAGGATTGCGGCGACGGCGG+AGG | - | chr7_3:50400663-50400682 | None:intergenic | 70.0% | |
| CAGGAGGACGGTCGGGGTGA+GGG | - | chr7_3:50400757-50400776 | None:intergenic | 70.0% | |
| CGGATCCAGGAGGACGGTCG+GGG | - | chr7_3:50400763-50400782 | None:intergenic | 70.0% | |
| CGGAGGAGGGTGGCCGAAGT+AGG | - | chr7_3:50400646-50400665 | None:intergenic | 70.0% | |
| ATTGCGGCGACGGCGGAGGA+GGG | - | chr7_3:50400659-50400678 | None:intergenic | 70.0% | |
| AAGGATTGCGGCGACGGCGG+AGG | - | chr7_3:50400663-50400682 | None:intergenic | 70.0% | |
| CAGGAGGACGGTCGGGGTGA+GGG | - | chr7_3:50400757-50400776 | None:intergenic | 70.0% | |
| CGGATCCAGGAGGACGGTCG+GGG | - | chr7_3:50400763-50400782 | None:intergenic | 70.0% | |
| GATTGCGGCGACGGCGGAGG+AGG | - | chr7_3:50400660-50400679 | None:intergenic | 75.0% | |
| CCAGGAGGACGGTCGGGGTG+AGG | - | chr7_3:50400758-50400777 | None:intergenic | 75.0% | |
| CCTCACCCCGACCGTCCTCC+TGG | + | chr7_3:50400755-50400774 | Msa1107960:intron | 75.0% | |
| GCGGAGGGGTCGGATCCAGG+AGG | - | chr7_3:50400773-50400792 | None:intergenic | 75.0% | |
| GATTGCGGCGACGGCGGAGG+AGG | - | chr7_3:50400660-50400679 | None:intergenic | 75.0% | |
| CCAGGAGGACGGTCGGGGTG+AGG | - | chr7_3:50400758-50400777 | None:intergenic | 75.0% | |
| CCTCACCCCGACCGTCCTCC+TGG | + | chr7_3:50400755-50400774 | Msa1107960:intron | 75.0% | |
| GCGGAGGGGTCGGATCCAGG+AGG | - | chr7_3:50400773-50400792 | None:intergenic | 75.0% | |
| ! | GGGGCGGAGGGGTCGGATCC+AGG | - | chr7_3:50400776-50400795 | None:intergenic | 80.0% |
| ! | GGGAGGAGGGGCGGAGGGGT+CGG | - | chr7_3:50400783-50400802 | None:intergenic | 80.0% |
| ! | GGGGCGGAGGGGTCGGATCC+AGG | - | chr7_3:50400776-50400795 | None:intergenic | 80.0% |
| ! | GGGAGGAGGGGCGGAGGGGT+CGG | - | chr7_3:50400783-50400802 | None:intergenic | 80.0% |
| ! | GCGGCGACGGCGGAGGAGGG+TGG | - | chr7_3:50400656-50400675 | None:intergenic | 85.0% |
| ! | GCGGCGACGGCGGAGGAGGG+TGG | - | chr7_3:50400656-50400675 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 50400545 | 50402838 | 50400545 | ID=Msa1107960;Name=Msa1107960 |
| chr7_3 | mRNA | 50400545 | 50402838 | 50400545 | ID=Msa1107960-mRNA-1;Parent=Msa1107960;Name=Msa1107960-mRNA-1;_AED=0.39;_eAED=0.60;_QI=0|0|0|1|1|1|2|0|145 |
| chr7_3 | exon | 50400545 | 50400749 | 50400545 | ID=Msa1107960-mRNA-1:exon:10323;Parent=Msa1107960-mRNA-1 |
| chr7_3 | exon | 50402606 | 50402838 | 50402606 | ID=Msa1107960-mRNA-1:exon:10324;Parent=Msa1107960-mRNA-1 |
| chr7_3 | CDS | 50400545 | 50400749 | 50400545 | ID=Msa1107960-mRNA-1:cds;Parent=Msa1107960-mRNA-1 |
| chr7_3 | CDS | 50402606 | 50402838 | 50402606 | ID=Msa1107960-mRNA-1:cds;Parent=Msa1107960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
