Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033040 | XP_024627327.2 | 96.850 | 254 | 8 | 0 | 14 | 267 | 7 | 260 | 2.21e-174 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033040 | sp|Q4IPX8|SYM1_GIBZE | 33.918 | 171 | 107 | 3 | 92 | 258 | 3 | 171 | 5.92e-29 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033040 | A0A396H4D1 | 96.850 | 254 | 8 | 0 | 14 | 267 | 7 | 260 | 1.05e-174 | 491 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0840380 | Msa1033040 | -0.805243 | 1.466836e-49 | -8.615850e-47 |
| Msa0182790 | Msa1033040 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
| Msa0389610 | Msa1033040 | 0.824734 | 6.874774e-54 | -8.615850e-47 |
| Msa1029060 | Msa1033040 | 0.806151 | 9.456206e-50 | -8.615850e-47 |
| Msa1033040 | Msa1080330 | 0.802246 | 6.143763e-49 | -8.615850e-47 |
| Msa1033040 | Msa1156150 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
| Msa1033040 | Msa1191050 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0528610 | Msa1033040 | 0.811927 | 5.481402e-51 | -8.615850e-47 |
| Msa0876360 | Msa1033040 | -0.801555 | 8.520354e-49 | -8.615850e-47 |
| Msa0946280 | Msa1033040 | 0.812755 | 3.613497e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033040 | MtrunA17_Chr7g0255351 | 96.850 | 254 | 8 | 0 | 14 | 267 | 7 | 260 | 2.03e-178 | 491 |
| Msa1033040 | MtrunA17_Chr6g0465041 | 28.814 | 177 | 124 | 2 | 93 | 267 | 52 | 228 | 6.61e-22 | 91.3 |
| Msa1033040 | MtrunA17_Chr1g0207521 | 27.429 | 175 | 121 | 4 | 93 | 263 | 81 | 253 | 4.28e-19 | 84.0 |
| Msa1033040 | MtrunA17_Chr8g0390511 | 27.083 | 192 | 112 | 4 | 95 | 258 | 9 | 200 | 1.69e-15 | 73.6 |
| Msa1033040 | MtrunA17_Chr7g0255321 | 57.143 | 119 | 41 | 3 | 2 | 115 | 1 | 114 | 7.65e-15 | 72.8 |
| Msa1033040 | MtrunA17_Chr1g0187331 | 29.651 | 172 | 115 | 5 | 97 | 264 | 12 | 181 | 3.61e-14 | 69.3 |
| Msa1033040 | MtrunA17_Chr2g0288811 | 27.119 | 177 | 125 | 4 | 94 | 267 | 9 | 184 | 1.73e-12 | 64.3 |
| Msa1033040 | MtrunA17_Chr7g0255331 | 56.780 | 118 | 40 | 4 | 1 | 112 | 3 | 115 | 3.45e-12 | 65.5 |
| Msa1033040 | MtrunA17_Chr1g0147191 | 27.041 | 196 | 118 | 5 | 96 | 266 | 7 | 202 | 1.28e-11 | 62.8 |
| Msa1033040 | MtrunA17_Chr4g0040451 | 27.528 | 178 | 110 | 3 | 104 | 262 | 42 | 219 | 3.90e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033040 | AT5G19750.1 | 71.186 | 177 | 51 | 0 | 91 | 267 | 112 | 288 | 6.29e-90 | 268 |
| Msa1033040 | AT2G14860.1 | 28.902 | 173 | 121 | 2 | 93 | 263 | 73 | 245 | 3.88e-22 | 92.8 |
| Msa1033040 | AT5G43140.1 | 27.746 | 173 | 123 | 2 | 92 | 262 | 77 | 249 | 6.85e-21 | 89.4 |
| Msa1033040 | AT4G33905.1 | 27.907 | 172 | 122 | 2 | 93 | 262 | 82 | 253 | 1.76e-18 | 82.8 |
| Msa1033040 | AT4G14305.1 | 29.651 | 172 | 117 | 4 | 97 | 265 | 12 | 182 | 6.17e-15 | 71.6 |
| Msa1033040 | AT5G43140.2 | 29.730 | 111 | 77 | 1 | 92 | 201 | 77 | 187 | 1.43e-12 | 65.1 |
| Msa1033040 | AT4G04470.1 | 25.143 | 175 | 127 | 4 | 94 | 265 | 11 | 184 | 1.54e-12 | 65.1 |
| Msa1033040 | AT4G04470.2 | 25.143 | 175 | 127 | 4 | 94 | 265 | 11 | 184 | 1.54e-12 | 65.1 |
| Msa1033040 | AT3G24570.1 | 24.878 | 205 | 117 | 3 | 96 | 263 | 7 | 211 | 3.51e-12 | 65.1 |
Find 102 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTCCAACATTGCATTTC+TGG | 0.082502 | 7_1:+68121488 | Msa1033040:CDS |
| GAACATAAGTTTACCTATTT+TGG | 0.120688 | 7_1:-68123354 | None:intergenic |
| TTTAAATGTTATGGTAATTT+AGG | 0.152765 | 7_1:+68123927 | Msa1033040:three_prime_UTR |
| TAAACAAAACACCAACTTTA+TGG | 0.188890 | 7_1:+68118848 | Msa1033040:five_prime_UTR |
| TCTGCAATTCTTAACCTAAT+TGG | 0.197701 | 7_1:+68120184 | Msa1033040:CDS |
| ATTTGTTCCGCAACAATTTC+AGG | 0.214123 | 7_1:+68122333 | Msa1033040:CDS |
| TTCTAGCAAACTGGCAATTA+TGG | 0.222369 | 7_1:+68122284 | Msa1033040:CDS |
| TAAGAAAACTCCAAGGAATA+TGG | 0.243760 | 7_1:-68122060 | None:intergenic |
| TGCAGATGTTAAAGCCTTTA+CGG | 0.280586 | 7_1:-68120167 | None:intergenic |
| CAAAGAAGTTCTTCCAAAAT+AGG | 0.290408 | 7_1:+68123341 | Msa1033040:CDS |
| GGCAAATTAAATCTCCAATT+AGG | 0.308260 | 7_1:-68120198 | None:intergenic |
| GTTAAAGCCTTTACGGGAAC+AGG | 0.308774 | 7_1:-68120160 | None:intergenic |
| CAAAATTGCACCTGATGTTC+CGG | 0.308782 | 7_1:-68121897 | None:intergenic |
| GGGAGGTGGAAAGCGGTTAA+AGG | 0.313112 | 7_1:-68119089 | None:intergenic |
| TGCTGCCAATGTTGTTGCTT+TGG | 0.323599 | 7_1:+68123287 | Msa1033040:CDS |
| GTAACGTTGTAAAACCCTTT+TGG | 0.328437 | 7_1:+68118943 | Msa1033040:five_prime_UTR |
| ACTGGTGGAAATGGCGGCTC+TGG | 0.355126 | 7_1:+68119175 | Msa1033040:CDS |
| GCAGATGTTAAAGCCTTTAC+GGG | 0.383026 | 7_1:-68120166 | None:intergenic |
| GGCTCTGGAGGATGGAGTTC+CGG | 0.389173 | 7_1:+68119190 | Msa1033040:CDS |
| AGTCAATTGGTTACACTTCC+CGG | 0.398272 | 7_1:+68121878 | Msa1033040:CDS |
| GGAGGTGGAAAGCGGTTAAA+GGG | 0.403307 | 7_1:-68119088 | None:intergenic |
| GTTGAGTGTGCGTAAGTGTT+AGG | 0.405349 | 7_1:-68118809 | None:intergenic |
| GATGACGGTTCCGGCGGTAC+TGG | 0.414975 | 7_1:+68119157 | Msa1033040:CDS |
| CCGAAAATGATGTCTGGAAC+TGG | 0.422937 | 7_1:+68118968 | Msa1033040:exon |
| GTGTTGTTGGAAATTGAAGG+GGG | 0.425223 | 7_1:-68119063 | None:intergenic |
| TTTCTGCTGTTCTAGCAAAC+TGG | 0.427465 | 7_1:+68122275 | Msa1033040:CDS |
| AGGTGGAAAGCGGTTAAAGG+GGG | 0.429154 | 7_1:-68119086 | None:intergenic |
| GCCATCTCCGATGACGGTTC+CGG | 0.434434 | 7_1:+68119148 | Msa1033040:CDS |
| TCCGGCGGTACTGGTGGAAA+TGG | 0.436326 | 7_1:+68119166 | Msa1033040:CDS |
| TTTCTCGGTCTTGTGCTAGT+TGG | 0.440054 | 7_1:+68121469 | Msa1033040:CDS |
| AAAATTGCACCTGATGTTCC+GGG | 0.442134 | 7_1:-68121896 | None:intergenic |
| GAGGTGGAAAGCGGTTAAAG+GGG | 0.443444 | 7_1:-68119087 | None:intergenic |
| AATTGGAGATTTAATTTGCC+AGG | 0.446331 | 7_1:+68120201 | Msa1033040:CDS |
| GGTGTTGTTGGAAATTGAAG+GGG | 0.447044 | 7_1:-68119064 | None:intergenic |
| TAATATTACATGCACTTTCG+TGG | 0.450237 | 7_1:+68123997 | Msa1033040:three_prime_UTR |
| GGTGGGCGGTTGAGGAGAAA+AGG | 0.451410 | 7_1:-68119041 | None:intergenic |
| TTTGCGGCTTGTACTTGATC+AGG | 0.451615 | 7_1:+68121916 | Msa1033040:CDS |
| TCAGGCCTGGGAGTAGCTGC+AGG | 0.452128 | 7_1:+68123877 | Msa1033040:intron |
| TTGGAGCCGAAAATGATGTC+TGG | 0.461474 | 7_1:+68118962 | Msa1033040:exon |
| GTTACACTTCCCGGAACATC+AGG | 0.467461 | 7_1:+68121887 | Msa1033040:CDS |
| GGGGTGTTGTTGGAAATTGA+AGG | 0.467790 | 7_1:-68119066 | None:intergenic |
| TGTTGTTGGAAATTGAAGGG+GGG | 0.469158 | 7_1:-68119062 | None:intergenic |
| GTATTTGTATCTGAGTCAAT+TGG | 0.472666 | 7_1:+68121865 | Msa1033040:CDS |
| CGCAGTTGAGCAAAGGGAGG+TGG | 0.474866 | 7_1:-68119103 | None:intergenic |
| TTGTTGATCTCACATGATGT+AGG | 0.476459 | 7_1:-68124027 | None:intergenic |
| GGTGGAAAGCGGTTAAAGGG+GGG | 0.476586 | 7_1:-68119085 | None:intergenic |
| ATCGGAGATGGCAGAGAGAC+GGG | 0.478747 | 7_1:-68119137 | None:intergenic |
| AGGATTTCTCTCCATAAAGT+TGG | 0.480166 | 7_1:-68118859 | None:intergenic |
| GAAATGGCGGCTCTGGAGGA+TGG | 0.480688 | 7_1:+68119182 | Msa1033040:CDS |
| AAAATACCCTGTTCCCGTAA+AGG | 0.483262 | 7_1:+68120153 | Msa1033040:CDS |
| AAGAAAACTCCAAGGAATAT+GGG | 0.487471 | 7_1:-68122059 | None:intergenic |
| CCAATGTTGTTGCTTTGGTG+TGG | 0.491917 | 7_1:+68123292 | Msa1033040:CDS |
| CTCTCTGCCATCTCCGATGA+CGG | 0.493453 | 7_1:+68119142 | Msa1033040:CDS |
| AGGAATGTCCTCTTCAAATC+CGG | 0.500940 | 7_1:-68121439 | None:intergenic |
| CGGAAACGCAGTTGAGCAAA+GGG | 0.501717 | 7_1:-68119109 | None:intergenic |
| CTGATGATGGAGGAGGTTCA+TGG | 0.502591 | 7_1:+68119224 | Msa1033040:CDS |
| ATGAACAACTAAGTGATCTC+AGG | 0.509547 | 7_1:-68124074 | None:intergenic |
| GACGGTTCCGGCGGTACTGG+TGG | 0.513649 | 7_1:+68119160 | Msa1033040:CDS |
| AGGAGAAAAGGTGACGGAGC+GGG | 0.529966 | 7_1:-68119029 | None:intergenic |
| GCCGGAACCGTCATCGGAGA+TGG | 0.536220 | 7_1:-68119149 | None:intergenic |
| ATCATCAGCTTCATTGTCAC+CGG | 0.539087 | 7_1:-68119209 | None:intergenic |
| TGACGGAGCGGGATAACAGA+AGG | 0.540095 | 7_1:-68119018 | None:intergenic |
| CAAGACCGAGAAACGAAAAG+AGG | 0.540458 | 7_1:-68121459 | None:intergenic |
| CTAAAGTTGAGAAATTGAAA+AGG | 0.548551 | 7_1:-68122310 | None:intergenic |
| GGTGGAAATGGCGGCTCTGG+AGG | 0.555616 | 7_1:+68119178 | Msa1033040:CDS |
| CATCGGAGATGGCAGAGAGA+CGG | 0.555627 | 7_1:-68119138 | None:intergenic |
| GCCATTTCCACCAGTACCGC+CGG | 0.558308 | 7_1:-68119167 | None:intergenic |
| TTTAGGTGAACATGAAAACT+AGG | 0.558942 | 7_1:+68123944 | Msa1033040:three_prime_UTR |
| AGCTTAGGCACAGCCTGTGA+TGG | 0.561039 | 7_1:-68122110 | None:intergenic |
| GTTCATGGTCATTCTTGTCA+TGG | 0.561499 | 7_1:+68119239 | Msa1033040:CDS |
| GGTGACAATGAAGCTGATGA+TGG | 0.562448 | 7_1:+68119211 | Msa1033040:CDS |
| AGTACCGCCGGAACCGTCAT+CGG | 0.563698 | 7_1:-68119155 | None:intergenic |
| CAGCTCCTGCAGCTACTCCC+AGG | 0.565109 | 7_1:-68123882 | None:intergenic |
| TCTTCATTGGTGACACTAGA+GGG | 0.566172 | 7_1:+68122083 | Msa1033040:CDS |
| ATCTTCATTGGTGACACTAG+AGG | 0.569274 | 7_1:+68122082 | Msa1033040:CDS |
| GGGTGTTGTTGGAAATTGAA+GGG | 0.570068 | 7_1:-68119065 | None:intergenic |
| GTGAGATCAACAAATTTGAA+AGG | 0.576547 | 7_1:+68124037 | Msa1033040:three_prime_UTR |
| ACGGAAACGCAGTTGAGCAA+AGG | 0.578014 | 7_1:-68119110 | None:intergenic |
| TATTACCAGAAATGCAATGT+TGG | 0.588658 | 7_1:-68121493 | None:intergenic |
| GACGGAGCGGGATAACAGAA+GGG | 0.590149 | 7_1:-68119017 | None:intergenic |
| TGGCAGAGAGACGGGAATGA+CGG | 0.590537 | 7_1:-68119129 | None:intergenic |
| AAGCAACAACATTGGCAGCA+AGG | 0.594671 | 7_1:-68123284 | None:intergenic |
| AATGATACCTGCTTAAGCTT+AGG | 0.595325 | 7_1:-68122125 | None:intergenic |
| GGCGGTACTGGTGGAAATGG+CGG | 0.595875 | 7_1:+68119169 | Msa1033040:CDS |
| ACTAGAGGGAAGGCCATCAC+AGG | 0.601060 | 7_1:+68122097 | Msa1033040:CDS |
| TGCAGACACCGGATTTGAAG+AGG | 0.602054 | 7_1:+68121431 | Msa1033040:CDS |
| ATCTCCGATGACGGTTCCGG+CGG | 0.614643 | 7_1:+68119151 | Msa1033040:CDS |
| AGTCTAACCTGAAATTGTTG+CGG | 0.618957 | 7_1:-68122340 | None:intergenic |
| CCACACCAAAGCAACAACAT+TGG | 0.624568 | 7_1:-68123292 | None:intergenic |
| CATTGGTGACACTAGAGGGA+AGG | 0.633202 | 7_1:+68122087 | Msa1033040:CDS |
| GAGGAGAAAAGGTGACGGAG+CGG | 0.643194 | 7_1:-68119030 | None:intergenic |
| TAAACACACACACAAAGCAA+AGG | 0.646000 | 7_1:+68118918 | Msa1033040:five_prime_UTR |
| TTAAAGCCTTTACGGGAACA+GGG | 0.646035 | 7_1:-68120159 | None:intergenic |
| ATGAAGATAAGAAAACTCCA+AGG | 0.657694 | 7_1:-68122067 | None:intergenic |
| GAGCAAAGGGAGGTGGAAAG+CGG | 0.658143 | 7_1:-68119096 | None:intergenic |
| AATGAAGCTGATGATGGAGG+AGG | 0.659950 | 7_1:+68119217 | Msa1033040:CDS |
| CGGTTGAGGAGAAAAGGTGA+CGG | 0.666866 | 7_1:-68119035 | None:intergenic |
| ACGGAGCGGGATAACAGAAG+GGG | 0.671481 | 7_1:-68119016 | None:intergenic |
| GACAATGAAGCTGATGATGG+AGG | 0.686816 | 7_1:+68119214 | Msa1033040:CDS |
| GATAGACAAAGTGCAGACAC+CGG | 0.691289 | 7_1:+68121420 | Msa1033040:CDS |
| AAACGCAGTTGAGCAAAGGG+AGG | 0.710630 | 7_1:-68119106 | None:intergenic |
| CGGAGCGGGATAACAGAAGG+GGG | 0.725367 | 7_1:-68119015 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTAATTTGGTTA+GGG | + | chr7_1:68119289-68119308 | Msa1033040:intron | 10.0% |
| !!! | TTTTTGCTTATAATTAAAAA+CGG | - | chr7_1:68120362-68120381 | None:intergenic | 10.0% |
| !! | TTAAAAAGTAAACTAAATAT+TGG | - | chr7_1:68121307-68121326 | None:intergenic | 10.0% |
| !! | TCAATTTGAATATAAAAAAA+AGG | - | chr7_1:68122706-68122725 | None:intergenic | 10.0% |
| !!! | TATGTTATTTTTAAATGTTA+TGG | + | chr7_1:68123918-68123937 | Msa1033040:three_prime_UTR | 10.0% |
| !!! | GTTTTTATTTTAATTTGGTT+AGG | + | chr7_1:68119288-68119307 | Msa1033040:intron | 15.0% |
| !!! | TTTCATAAGCTATTTTAATA+AGG | - | chr7_1:68119610-68119629 | None:intergenic | 15.0% |
| !!! | AGCACTTATATTTATTTTTT+TGG | + | chr7_1:68119742-68119761 | Msa1033040:intron | 15.0% |
| !!! | AATTTGCTTATAATTAAGAA+CGG | + | chr7_1:68120469-68120488 | Msa1033040:intron | 15.0% |
| !!! | TTTGATATTCTAATTTTTGA+GGG | + | chr7_1:68122007-68122026 | Msa1033040:intron | 15.0% |
| !! | AAATCAAATAAAACTGTTAT+CGG | - | chr7_1:68122154-68122173 | None:intergenic | 15.0% |
| !! | TTTAAATGTTATGGTAATTT+AGG | + | chr7_1:68123927-68123946 | Msa1033040:three_prime_UTR | 15.0% |
| !!! | ATCATCATTTAACTTTTTTC+AGG | - | chr7_1:68118882-68118901 | None:intergenic | 20.0% |
| !!! | ATGTGATAATTTGTTTTCAT+AGG | - | chr7_1:68119424-68119443 | None:intergenic | 20.0% |
| !!! | ATTAAGCTTTTTATCCAAAT+AGG | + | chr7_1:68119583-68119602 | Msa1033040:intron | 20.0% |
| !!! | TTAAGCTTTTTATCCAAATA+GGG | + | chr7_1:68119584-68119603 | Msa1033040:intron | 20.0% |
| !! | AAAAAAGTTGAAAGAGAAAA+GGG | - | chr7_1:68120245-68120264 | None:intergenic | 20.0% |
| !! | AAGAGAACAGAAAATTAATA+AGG | - | chr7_1:68121051-68121070 | None:intergenic | 20.0% |
| !! | ATCATACATAAATCAATCAT+TGG | - | chr7_1:68121726-68121745 | None:intergenic | 20.0% |
| !! | TGATTTATGTATGATATTCT+TGG | + | chr7_1:68121731-68121750 | Msa1033040:intron | 20.0% |
| !!! | GTTTGATATTCTAATTTTTG+AGG | + | chr7_1:68122006-68122025 | Msa1033040:intron | 20.0% |
| !!! | ATCATATGTCATTTTTTATG+TGG | + | chr7_1:68122642-68122661 | Msa1033040:intron | 20.0% |
| !!! | TCATATGTCATTTTTTATGT+GGG | + | chr7_1:68122643-68122662 | Msa1033040:intron | 20.0% |
| !! | TTGAAAACAAGAAAAGTAAA+AGG | - | chr7_1:68122863-68122882 | None:intergenic | 20.0% |
| !! | TAGAAAACATACAAGTTAAA+GGG | - | chr7_1:68123150-68123169 | None:intergenic | 20.0% |
| !! | ATAGAAAACATACAAGTTAA+AGG | - | chr7_1:68123151-68123170 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGCAAAATGAATT+AGG | + | chr7_1:68123467-68123486 | Msa1033040:intron | 20.0% |
| !!! | ATCATTCTTCATAATTTTTC+AGG | + | chr7_1:68123859-68123878 | Msa1033040:intron | 20.0% |
| ! | TAAACAAAACACCAACTTTA+TGG | + | chr7_1:68118848-68118867 | Msa1033040:five_prime_UTR | 25.0% |
| !!! | TATTTTAATAAGGCCCTATT+TGG | - | chr7_1:68119600-68119619 | None:intergenic | 25.0% |
| ! | TGTAAGCAATTTAACTACAT+TGG | + | chr7_1:68119690-68119709 | Msa1033040:intron | 25.0% |
| ! | TTCATAAAAAACACTGTTAC+TGG | - | chr7_1:68119937-68119956 | None:intergenic | 25.0% |
| ! | ACATAATTGTTAATGCTATC+AGG | - | chr7_1:68120028-68120047 | None:intergenic | 25.0% |
| ! | ATGAATACACATCAAGTAAT+TGG | + | chr7_1:68120059-68120078 | Msa1033040:intron | 25.0% |
| ! | TAGAAAACAATTGTAATACC+TGG | - | chr7_1:68120222-68120241 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTGAAAGAGAAA+AGG | - | chr7_1:68120246-68120265 | None:intergenic | 25.0% |
| ! | TGCTTATAATTAAAAACGGA+AGG | - | chr7_1:68120358-68120377 | None:intergenic | 25.0% |
| ! | GATGTATGTGATTCATATTA+TGG | + | chr7_1:68120408-68120427 | Msa1033040:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr7_1:68120435-68120454 | None:intergenic | 25.0% |
| !!! | AAAGGTATCCAAATTATGTA+AGG | + | chr7_1:68120581-68120600 | Msa1033040:intron | 25.0% |
| !! | AAGGTATCCAAATTATGTAA+GGG | + | chr7_1:68120582-68120601 | Msa1033040:intron | 25.0% |
| ! | TAATAAATTGACTGCTGATA+AGG | - | chr7_1:68120884-68120903 | None:intergenic | 25.0% |
| ! | AAAAGTTCATTCCAAAGAAT+TGG | - | chr7_1:68120919-68120938 | None:intergenic | 25.0% |
| !!! | TTGGAATGAACTTTTTTTCA+CGG | + | chr7_1:68120924-68120943 | Msa1033040:intron | 25.0% |
| ! | TCCTTTCTGAATATTATCTT+TGG | + | chr7_1:68121110-68121129 | Msa1033040:intron | 25.0% |
| ! | CCTTTCTGAATATTATCTTT+GGG | + | chr7_1:68121111-68121130 | Msa1033040:intron | 25.0% |
| ! | AATATTATCTTTGGGCTTAT+GGG | + | chr7_1:68121119-68121138 | Msa1033040:intron | 25.0% |
| !! | CAAATATTTATTCTTTTCCC+CGG | + | chr7_1:68121688-68121707 | Msa1033040:intron | 25.0% |
| !!! | GACATACACTTTGATTTTAT+AGG | + | chr7_1:68121843-68121862 | Msa1033040:intron | 25.0% |
| ! | GTAAACTGTTATAATCATAG+TGG | + | chr7_1:68122184-68122203 | Msa1033040:intron | 25.0% |
| !! | ATCCTAAATTTTCATTTTGC+AGG | + | chr7_1:68122246-68122265 | Msa1033040:intron | 25.0% |
| ! | CTAAAGTTGAGAAATTGAAA+AGG | - | chr7_1:68122313-68122332 | None:intergenic | 25.0% |
| ! | ATTCTTCATCTTATGTCATA+TGG | + | chr7_1:68122565-68122584 | Msa1033040:intron | 25.0% |
| !! | TAGTACATGCAATTTTACTT+TGG | + | chr7_1:68122728-68122747 | Msa1033040:intron | 25.0% |
| !! | AGTACATGCAATTTTACTTT+GGG | + | chr7_1:68122729-68122748 | Msa1033040:intron | 25.0% |
| ! | ATTTACATGCATTCTAAACT+TGG | - | chr7_1:68123254-68123273 | None:intergenic | 25.0% |
| ! | GAATGCATGTAAATAATTTC+AGG | + | chr7_1:68123260-68123279 | Msa1033040:intron | 25.0% |
| !! | GAACATAAGTTTACCTATTT+TGG | - | chr7_1:68123357-68123376 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr7_1:68123674-68123693 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr7_1:68123783-68123802 | Msa1033040:intron | 25.0% |
| ! | AAATTATGAAGAATGATCAG+TGG | - | chr7_1:68123856-68123875 | None:intergenic | 25.0% |
| ACTTGTATAAAGAGAGCTTA+TGG | + | chr7_1:68119341-68119360 | Msa1033040:intron | 30.0% | |
| ! | ATGTTTTCTTAAGCTCTTCA+AGG | + | chr7_1:68119442-68119461 | Msa1033040:intron | 30.0% |
| TCTAACACACTCTTAATTTC+AGG | + | chr7_1:68119831-68119850 | Msa1033040:intron | 30.0% | |
| ! | ACACTCTTAATTTCAGGTAA+AGG | + | chr7_1:68119837-68119856 | Msa1033040:intron | 30.0% |
| AAGTTGTAACACATATTGCA+TGG | + | chr7_1:68119998-68120017 | Msa1033040:intron | 30.0% | |
| ! | CAACTCATTGAACATGATTT+TGG | + | chr7_1:68120086-68120105 | Msa1033040:intron | 30.0% |
| TCTGCAATTCTTAACCTAAT+TGG | + | chr7_1:68120184-68120203 | Msa1033040:CDS | 30.0% | |
| GGCAAATTAAATCTCCAATT+AGG | - | chr7_1:68120201-68120220 | None:intergenic | 30.0% | |
| !! | AATTGGAGATTTAATTTGCC+AGG | + | chr7_1:68120201-68120220 | Msa1033040:CDS | 30.0% |
| TCAAGATGTATGAGATACAA+AGG | + | chr7_1:68120307-68120326 | Msa1033040:intron | 30.0% | |
| TTGCTTATAATTAAGAACGG+AGG | + | chr7_1:68120472-68120491 | Msa1033040:intron | 30.0% | |
| TGCTTATAATTAAGAACGGA+GGG | + | chr7_1:68120473-68120492 | Msa1033040:intron | 30.0% | |
| !!! | TACTTTTTTTCAAGCTGCTT+GGG | + | chr7_1:68120498-68120517 | Msa1033040:intron | 30.0% |
| AAAGCATAACTATTCTTCCT+CGG | - | chr7_1:68120627-68120646 | None:intergenic | 30.0% | |
| ! | AATAGTTATGCTTTAGCTCA+TGG | + | chr7_1:68120633-68120652 | Msa1033040:intron | 30.0% |
| ! | ATAGTTATGCTTTAGCTCAT+GGG | + | chr7_1:68120634-68120653 | Msa1033040:intron | 30.0% |
| TCTATGAATAAGATTGCTGA+TGG | + | chr7_1:68120684-68120703 | Msa1033040:intron | 30.0% | |
| CACTTATTCAGAACAAGATT+CGG | + | chr7_1:68120743-68120762 | Msa1033040:intron | 30.0% | |
| ACTTATTCAGAACAAGATTC+GGG | + | chr7_1:68120744-68120763 | Msa1033040:intron | 30.0% | |
| ! | TAACTAGCATTTTCAGCTTT+TGG | - | chr7_1:68120779-68120798 | None:intergenic | 30.0% |
| AAATCTCTCTACCAATTCTT+TGG | + | chr7_1:68120905-68120924 | Msa1033040:intron | 30.0% | |
| AACAGAAAATTAATAAGGCC+TGG | - | chr7_1:68121046-68121065 | None:intergenic | 30.0% | |
| !! | TCTCTTTGCTATTTATTAGC+AGG | + | chr7_1:68121065-68121084 | Msa1033040:intron | 30.0% |
| CCCAAAGATAATATTCAGAA+AGG | - | chr7_1:68121114-68121133 | None:intergenic | 30.0% | |
| GAATATTATCTTTGGGCTTA+TGG | + | chr7_1:68121118-68121137 | Msa1033040:intron | 30.0% | |
| ATATTATCTTTGGGCTTATG+GGG | + | chr7_1:68121120-68121139 | Msa1033040:intron | 30.0% | |
| TATTACCAGAAATGCAATGT+TGG | - | chr7_1:68121496-68121515 | None:intergenic | 30.0% | |
| GTATTTGTATCTGAGTCAAT+TGG | + | chr7_1:68121865-68121884 | Msa1033040:CDS | 30.0% | |
| GATATAAAGTGACAGTATGT+GGG | - | chr7_1:68121967-68121986 | None:intergenic | 30.0% | |
| TGATATAAAGTGACAGTATG+TGG | - | chr7_1:68121968-68121987 | None:intergenic | 30.0% | |
| ! | TTATTTTCTCCCATATTCCT+TGG | + | chr7_1:68122050-68122069 | Msa1033040:CDS | 30.0% |
| AAGAAAACTCCAAGGAATAT+GGG | - | chr7_1:68122062-68122081 | None:intergenic | 30.0% | |
| TAAGAAAACTCCAAGGAATA+TGG | - | chr7_1:68122063-68122082 | None:intergenic | 30.0% | |
| ATGAAGATAAGAAAACTCCA+AGG | - | chr7_1:68122070-68122089 | None:intergenic | 30.0% | |
| ! | TGGAGTTTTCTTATCTTCAT+TGG | + | chr7_1:68122070-68122089 | Msa1033040:CDS | 30.0% |
| CTCCTGCAAAATGAAAATTT+AGG | - | chr7_1:68122251-68122270 | None:intergenic | 30.0% | |
| ! | AAATTTTCATTTTGCAGGAG+TGG | + | chr7_1:68122251-68122270 | Msa1033040:intron | 30.0% |
| CTATATTAAAACCACCAAAC+AGG | - | chr7_1:68122426-68122445 | None:intergenic | 30.0% | |
| TCTGATAACAGTAGGAAATA+AGG | + | chr7_1:68122526-68122545 | Msa1033040:intron | 30.0% | |
| ATAACAGTAGGAAATAAGGA+AGG | + | chr7_1:68122530-68122549 | Msa1033040:intron | 30.0% | |
| ! | AAGTTCGTCAAGAAGATTTT+TGG | + | chr7_1:68122782-68122801 | Msa1033040:intron | 30.0% |
| ! | ATTTTCTCAAATGCCTGAAA+TGG | + | chr7_1:68123078-68123097 | Msa1033040:intron | 30.0% |
| GGTAACGACATTAAGAAAAT+GGG | - | chr7_1:68123233-68123252 | None:intergenic | 30.0% | |
| ! | TGGTAACGACATTAAGAAAA+TGG | - | chr7_1:68123234-68123253 | None:intergenic | 30.0% |
| CAAAGAAGTTCTTCCAAAAT+AGG | + | chr7_1:68123341-68123360 | Msa1033040:CDS | 30.0% | |
| GTAATAGAGCAAGATAACAT+TGG | - | chr7_1:68123396-68123415 | None:intergenic | 30.0% | |
| CAAACAACATTAAGACTCTT+GGG | + | chr7_1:68123536-68123555 | Msa1033040:intron | 30.0% | |
| TTTAGGTGAACATGAAAACT+AGG | + | chr7_1:68123944-68123963 | Msa1033040:three_prime_UTR | 30.0% | |
| TAATATTACATGCACTTTCG+TGG | + | chr7_1:68123997-68124016 | Msa1033040:three_prime_UTR | 30.0% | |
| GTGAGATCAACAAATTTGAA+AGG | + | chr7_1:68124037-68124056 | Msa1033040:three_prime_UTR | 30.0% | |
| AGGATTTCTCTCCATAAAGT+TGG | - | chr7_1:68118862-68118881 | None:intergenic | 35.0% | |
| TAAACACACACACAAAGCAA+AGG | + | chr7_1:68118918-68118937 | Msa1033040:five_prime_UTR | 35.0% | |
| ! | GTAACGTTGTAAAACCCTTT+TGG | + | chr7_1:68118943-68118962 | Msa1033040:five_prime_UTR | 35.0% |
| TAATTTGGTTAGGGTGTGTT+TGG | + | chr7_1:68119298-68119317 | Msa1033040:intron | 35.0% | |
| AGCTTATGGCATGTTTGAAT+TGG | + | chr7_1:68119355-68119374 | Msa1033040:intron | 35.0% | |
| TGCAGATGTTAAAGCCTTTA+CGG | - | chr7_1:68120170-68120189 | None:intergenic | 35.0% | |
| !!! | GTACTTTTTTTCAAGCTGCT+TGG | + | chr7_1:68120497-68120516 | Msa1033040:intron | 35.0% |
| ATTTGCAATCTCATAGTGTG+CGG | + | chr7_1:68120556-68120575 | Msa1033040:intron | 35.0% | |
| TCATTGATGCACAGCATATT+GGG | + | chr7_1:68120972-68120991 | Msa1033040:intron | 35.0% | |
| TTAATAAGGCCTGGACTTAA+AGG | - | chr7_1:68121037-68121056 | None:intergenic | 35.0% | |
| TATTATCTTTGGGCTTATGG+GGG | + | chr7_1:68121121-68121140 | Msa1033040:intron | 35.0% | |
| !! | TGGTCAATCTTCTTTGGTTT+TGG | + | chr7_1:68121148-68121167 | Msa1033040:intron | 35.0% |
| !!! | TTTGGTTTTGGTATCAAGCT+TGG | + | chr7_1:68121160-68121179 | Msa1033040:intron | 35.0% |
| ! | ACATTCCTCTTTTCGTTTCT+CGG | + | chr7_1:68121454-68121473 | Msa1033040:CDS | 35.0% |
| AAATACCAACGCAGATTCTA+GGG | - | chr7_1:68121519-68121538 | None:intergenic | 35.0% | |
| CCACGTATTATTATACGCAT+TGG | - | chr7_1:68121615-68121634 | None:intergenic | 35.0% | |
| CCAATGCGTATAATAATACG+TGG | + | chr7_1:68121612-68121631 | Msa1033040:intron | 35.0% | |
| TGCAAAAAAACAACAGCACA+AGG | - | chr7_1:68121659-68121678 | None:intergenic | 35.0% | |
| TCATTGGACTCTAACAATAC+CGG | - | chr7_1:68121710-68121729 | None:intergenic | 35.0% | |
| !!! | TGCTGGAAGTCGTTTTAATT+TGG | - | chr7_1:68121759-68121778 | None:intergenic | 35.0% |
| GTGTATGTCAAGAAAGACAA+CGG | - | chr7_1:68121832-68121851 | None:intergenic | 35.0% | |
| AATGATACCTGCTTAAGCTT+AGG | - | chr7_1:68122128-68122147 | None:intergenic | 35.0% | |
| TTCTAGCAAACTGGCAATTA+TGG | + | chr7_1:68122284-68122303 | Msa1033040:CDS | 35.0% | |
| ATTTGTTCCGCAACAATTTC+AGG | + | chr7_1:68122333-68122352 | Msa1033040:CDS | 35.0% | |
| AGTCTAACCTGAAATTGTTG+CGG | - | chr7_1:68122343-68122362 | None:intergenic | 35.0% | |
| ATCCATAGTCTGATAACAGT+AGG | + | chr7_1:68122518-68122537 | Msa1033040:intron | 35.0% | |
| TTCCTACTGTTATCAGACTA+TGG | - | chr7_1:68122523-68122542 | None:intergenic | 35.0% | |
| !!! | TCATTTTTTATGTGGGCGAT+GGG | + | chr7_1:68122650-68122669 | Msa1033040:intron | 35.0% |
| ! | ACATGCAATTTTACTTTGGG+TGG | + | chr7_1:68122732-68122751 | Msa1033040:intron | 35.0% |
| TTGACGAACTTTCGAAAAAC+AGG | - | chr7_1:68122773-68122792 | None:intergenic | 35.0% | |
| !! | AGATTTTTGGATGCACGAAA+TGG | + | chr7_1:68122795-68122814 | Msa1033040:intron | 35.0% |
| TAAGGTATAGATGCATGTGT+GGG | - | chr7_1:68123013-68123032 | None:intergenic | 35.0% | |
| CAATTATCTAAGTCCACCTA+AGG | - | chr7_1:68123031-68123050 | None:intergenic | 35.0% | |
| ACCATATATACCTCCATTTC+AGG | - | chr7_1:68123094-68123113 | None:intergenic | 35.0% | |
| TATCTTGCTCTATTACCTGT+AGG | + | chr7_1:68123400-68123419 | Msa1033040:intron | 35.0% | |
| TATGTACACTTGAATCCTAC+AGG | - | chr7_1:68123418-68123437 | None:intergenic | 35.0% | |
| TTCAAGTGTACATAAGCAGT+AGG | + | chr7_1:68123424-68123443 | Msa1033040:intron | 35.0% | |
| AATTAGGCAGTACTAACCAA+AGG | + | chr7_1:68123483-68123502 | Msa1033040:intron | 35.0% | |
| ! | TAATGTTGTTTGCATTTCCG+AGG | - | chr7_1:68123528-68123547 | None:intergenic | 35.0% |
| GCAAACAACATTAAGACTCT+TGG | + | chr7_1:68123535-68123554 | Msa1033040:intron | 35.0% | |
| AACATTAAGACTCTTGGGAA+GGG | + | chr7_1:68123541-68123560 | Msa1033040:intron | 35.0% | |
| !!! | TCTTCATAATTTTTCAGGCC+TGG | + | chr7_1:68123864-68123883 | Msa1033040:intron | 35.0% |
| !!! | CTTCATAATTTTTCAGGCCT+GGG | + | chr7_1:68123865-68123884 | Msa1033040:intron | 35.0% |
| TTGTTGATCTCACATGATGT+AGG | - | chr7_1:68124030-68124049 | None:intergenic | 35.0% | |
| ATGAACAACTAAGTGATCTC+AGG | - | chr7_1:68124077-68124096 | None:intergenic | 35.0% | |
| ! | CATCATTTTCGGCTCCAAAA+GGG | - | chr7_1:68118960-68118979 | None:intergenic | 40.0% |
| ! | ACATCATTTTCGGCTCCAAA+AGG | - | chr7_1:68118961-68118980 | None:intergenic | 40.0% |
| ! | CCAGTTCCAGACATCATTTT+CGG | - | chr7_1:68118971-68118990 | None:intergenic | 40.0% |
| TGTTGTTGGAAATTGAAGGG+GGG | - | chr7_1:68119065-68119084 | None:intergenic | 40.0% | |
| ! | GTGTTGTTGGAAATTGAAGG+GGG | - | chr7_1:68119066-68119085 | None:intergenic | 40.0% |
| !! | GGTGTTGTTGGAAATTGAAG+GGG | - | chr7_1:68119067-68119086 | None:intergenic | 40.0% |
| !! | GGGTGTTGTTGGAAATTGAA+GGG | - | chr7_1:68119068-68119087 | None:intergenic | 40.0% |
| ATCATCAGCTTCATTGTCAC+CGG | - | chr7_1:68119212-68119231 | None:intergenic | 40.0% | |
| GTTCATGGTCATTCTTGTCA+TGG | + | chr7_1:68119239-68119258 | Msa1033040:CDS | 40.0% | |
| GTAACATGACACTTGACTAC+AGG | + | chr7_1:68120113-68120132 | Msa1033040:intron | 40.0% | |
| AAAATACCCTGTTCCCGTAA+AGG | + | chr7_1:68120153-68120172 | Msa1033040:CDS | 40.0% | |
| TTAAAGCCTTTACGGGAACA+GGG | - | chr7_1:68120162-68120181 | None:intergenic | 40.0% | |
| GCAGATGTTAAAGCCTTTAC+GGG | - | chr7_1:68120169-68120188 | None:intergenic | 40.0% | |
| CTCGGAACCCTTACATAATT+TGG | - | chr7_1:68120592-68120611 | None:intergenic | 40.0% | |
| TAAGGGTTCCGAGAATTTAG+AGG | + | chr7_1:68120599-68120618 | Msa1033040:intron | 40.0% | |
| GAACAATATCCTCATGCCAA+AGG | - | chr7_1:68120666-68120685 | None:intergenic | 40.0% | |
| ! | CTAGCATTTTCAGCTTTTGG+TGG | - | chr7_1:68120776-68120795 | None:intergenic | 40.0% |
| TTGACTGCTGATAAGGACAT+TGG | - | chr7_1:68120877-68120896 | None:intergenic | 40.0% | |
| CTCATTGATGCACAGCATAT+TGG | + | chr7_1:68120971-68120990 | Msa1033040:intron | 40.0% | |
| CTCTGATTTCAACAAGAGCT+GGG | + | chr7_1:68120995-68121014 | Msa1033040:intron | 40.0% | |
| GGTGTTTGGTCAATCTTCTT+TGG | + | chr7_1:68121142-68121161 | Msa1033040:intron | 40.0% | |
| AGGAATGTCCTCTTCAAATC+CGG | - | chr7_1:68121442-68121461 | None:intergenic | 40.0% | |
| TTGGTCCAACATTGCATTTC+TGG | + | chr7_1:68121488-68121507 | Msa1033040:CDS | 40.0% | |
| TAATACCCTAGAATCTGCGT+TGG | + | chr7_1:68121511-68121530 | Msa1033040:intron | 40.0% | |
| GAAATACCAACGCAGATTCT+AGG | - | chr7_1:68121520-68121539 | None:intergenic | 40.0% | |
| ATTGGACTCTAACAATACCG+GGG | - | chr7_1:68121708-68121727 | None:intergenic | 40.0% | |
| CATTGGACTCTAACAATACC+GGG | - | chr7_1:68121709-68121728 | None:intergenic | 40.0% | |
| AACGACTTCCAGCATATACT+TGG | + | chr7_1:68121765-68121784 | Msa1033040:intron | 40.0% | |
| !! | CACTAGAGTGTTGATGAAGT+CGG | + | chr7_1:68121794-68121813 | Msa1033040:intron | 40.0% |
| !! | ACTAGAGTGTTGATGAAGTC+GGG | + | chr7_1:68121795-68121814 | Msa1033040:intron | 40.0% |
| AGTCAATTGGTTACACTTCC+CGG | + | chr7_1:68121878-68121897 | Msa1033040:CDS | 40.0% | |
| AAAATTGCACCTGATGTTCC+GGG | - | chr7_1:68121899-68121918 | None:intergenic | 40.0% | |
| CAAAATTGCACCTGATGTTC+CGG | - | chr7_1:68121900-68121919 | None:intergenic | 40.0% | |
| ! | GAACATCAGGTGCAATTTTG+CGG | + | chr7_1:68121900-68121919 | Msa1033040:CDS | 40.0% |
| ! | ATCTTCATTGGTGACACTAG+AGG | + | chr7_1:68122082-68122101 | Msa1033040:CDS | 40.0% |
| ! | TCTTCATTGGTGACACTAGA+GGG | + | chr7_1:68122083-68122102 | Msa1033040:CDS | 40.0% |
| TTTCTGCTGTTCTAGCAAAC+TGG | + | chr7_1:68122275-68122294 | Msa1033040:CDS | 40.0% | |
| TCAAGTTCATTTGAGCACAC+TGG | + | chr7_1:68122470-68122489 | Msa1033040:intron | 40.0% | |
| CTTATGTCATATGGCTCGTA+TGG | + | chr7_1:68122574-68122593 | Msa1033040:intron | 40.0% | |
| !!! | GTCATTTTTTATGTGGGCGA+TGG | + | chr7_1:68122649-68122668 | Msa1033040:intron | 40.0% |
| !!! | CATTTTTTATGTGGGCGATG+GGG | + | chr7_1:68122651-68122670 | Msa1033040:intron | 40.0% |
| ! | TGCTTGCTGACAATTTCAGA+AGG | + | chr7_1:68122829-68122848 | Msa1033040:intron | 40.0% |
| GTCGTCTTAATTTCATGTGC+AGG | - | chr7_1:68122905-68122924 | None:intergenic | 40.0% | |
| !!! | ACCACTTGTCATTTTCCAAG+TGG | + | chr7_1:68122923-68122942 | Msa1033040:intron | 40.0% |
| ACCACTTGGAAAATGACAAG+TGG | - | chr7_1:68122927-68122946 | None:intergenic | 40.0% | |
| !!! | TTGTCATTTTCCAAGTGGTG+TGG | + | chr7_1:68122928-68122947 | Msa1033040:intron | 40.0% |
| !!! | TGTCATTTTCCAAGTGGTGT+GGG | + | chr7_1:68122929-68122948 | Msa1033040:intron | 40.0% |
| CTAAGGTATAGATGCATGTG+TGG | - | chr7_1:68123014-68123033 | None:intergenic | 40.0% | |
| CACACATGCATCTATACCTT+AGG | + | chr7_1:68123012-68123031 | Msa1033040:intron | 40.0% | |
| ACATGCATCTATACCTTAGG+TGG | + | chr7_1:68123015-68123034 | Msa1033040:intron | 40.0% | |
| CAGGCATTTGAGAAAATTCG+CGG | - | chr7_1:68123075-68123094 | None:intergenic | 40.0% | |
| TTCTCAAATGCCTGAAATGG+AGG | + | chr7_1:68123081-68123100 | Msa1033040:intron | 40.0% | |
| ! | GCCTGAAATGGAGGTATATA+TGG | + | chr7_1:68123090-68123109 | Msa1033040:intron | 40.0% |
| CATTGGATGCTGTGCATTTA+AGG | - | chr7_1:68123379-68123398 | None:intergenic | 40.0% | |
| CAGTACTAACCAAAGGTCTT+AGG | + | chr7_1:68123490-68123509 | Msa1033040:intron | 40.0% | |
| TTAGGCTCAAATCCTATCCT+CGG | + | chr7_1:68123508-68123527 | Msa1033040:intron | 40.0% | |
| TTGTTTGCATTTCCGAGGAT+AGG | - | chr7_1:68123523-68123542 | None:intergenic | 40.0% | |
| CAACATTAAGACTCTTGGGA+AGG | + | chr7_1:68123540-68123559 | Msa1033040:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr7_1:68123670-68123689 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr7_1:68123671-68123690 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr7_1:68123786-68123805 | Msa1033040:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr7_1:68123787-68123806 | Msa1033040:intron | 40.0% | |
| ATGATGAGATTTACACCCTC+CGG | - | chr7_1:68123805-68123824 | None:intergenic | 40.0% | |
| GGTGTAAATCTCATCATCGT+TGG | + | chr7_1:68123808-68123827 | Msa1033040:intron | 40.0% | |
| TTGGAGCCGAAAATGATGTC+TGG | + | chr7_1:68118962-68118981 | Msa1033040:exon | 45.0% | |
| ! | CCGAAAATGATGTCTGGAAC+TGG | + | chr7_1:68118968-68118987 | Msa1033040:exon | 45.0% |
| ! | GGATAACAGAAGGGGGTTTT+GGG | - | chr7_1:68119011-68119030 | None:intergenic | 45.0% |
| !! | GGGGTGTTGTTGGAAATTGA+AGG | - | chr7_1:68119069-68119088 | None:intergenic | 45.0% |
| GGTGACAATGAAGCTGATGA+TGG | + | chr7_1:68119211-68119230 | Msa1033040:CDS | 45.0% | |
| !! | GACAATGAAGCTGATGATGG+AGG | + | chr7_1:68119214-68119233 | Msa1033040:CDS | 45.0% |
| !! | AATGAAGCTGATGATGGAGG+AGG | + | chr7_1:68119217-68119236 | Msa1033040:CDS | 45.0% |
| GTTAAAGCCTTTACGGGAAC+AGG | - | chr7_1:68120163-68120182 | None:intergenic | 45.0% | |
| !!! | TTTTTCAAGCTGCTTGGGCA+TGG | + | chr7_1:68120503-68120522 | Msa1033040:intron | 45.0% |
| GGCATGGCTTAACTCTTTAG+TGG | + | chr7_1:68120519-68120538 | Msa1033040:intron | 45.0% | |
| ATCTCATAGTGTGCGGACAA+AGG | + | chr7_1:68120563-68120582 | Msa1033040:intron | 45.0% | |
| AGCTCATGGGATCAAACCTT+TGG | + | chr7_1:68120647-68120666 | Msa1033040:intron | 45.0% | |
| GCTCTGATTTCAACAAGAGC+TGG | + | chr7_1:68120994-68121013 | Msa1033040:intron | 45.0% | |
| TAAGGCCTGGACTTAAAGGA+GGG | - | chr7_1:68121033-68121052 | None:intergenic | 45.0% | |
| ATAAGGCCTGGACTTAAAGG+AGG | - | chr7_1:68121034-68121053 | None:intergenic | 45.0% | |
| GATAGACAAAGTGCAGACAC+CGG | + | chr7_1:68121420-68121439 | Msa1033040:CDS | 45.0% | |
| CAAGACCGAGAAACGAAAAG+AGG | - | chr7_1:68121462-68121481 | None:intergenic | 45.0% | |
| ! | TTTCTCGGTCTTGTGCTAGT+TGG | + | chr7_1:68121469-68121488 | Msa1033040:CDS | 45.0% |
| CTTCCAGCATATACTTGGCA+TGG | + | chr7_1:68121770-68121789 | Msa1033040:intron | 45.0% | |
| TGACCATGCCAAGTATATGC+TGG | - | chr7_1:68121776-68121795 | None:intergenic | 45.0% | |
| TTTGCGGCTTGTACTTGATC+AGG | + | chr7_1:68121916-68121935 | Msa1033040:CDS | 45.0% | |
| AGTGACAGTATGTGGGTCAA+GGG | - | chr7_1:68121960-68121979 | None:intergenic | 45.0% | |
| AAGTGACAGTATGTGGGTCA+AGG | - | chr7_1:68121961-68121980 | None:intergenic | 45.0% | |
| !! | TCGTCACTCTGAAACCTGTT+TGG | + | chr7_1:68122409-68122428 | Msa1033040:intron | 45.0% |
| !! | TCACTCTGAAACCTGTTTGG+TGG | + | chr7_1:68122412-68122431 | Msa1033040:intron | 45.0% |
| !! | GTCATTTTCCAAGTGGTGTG+GGG | + | chr7_1:68122930-68122949 | Msa1033040:intron | 45.0% |
| AAGCAACAACATTGGCAGCA+AGG | - | chr7_1:68123287-68123306 | None:intergenic | 45.0% | |
| ! | TGCTGCCAATGTTGTTGCTT+TGG | + | chr7_1:68123287-68123306 | Msa1033040:CDS | 45.0% |
| CCACACCAAAGCAACAACAT+TGG | - | chr7_1:68123295-68123314 | None:intergenic | 45.0% | |
| !! | CCAATGTTGTTGCTTTGGTG+TGG | + | chr7_1:68123292-68123311 | Msa1033040:CDS | 45.0% |
| GGATTTGAGCCTAAGACCTT+TGG | - | chr7_1:68123502-68123521 | None:intergenic | 45.0% | |
| !!! | GAAGGGTTTTGTTGTCCATG+TGG | + | chr7_1:68123558-68123577 | Msa1033040:intron | 45.0% |
| TGTAACACAGCTATGTCCTG+AGG | - | chr7_1:68123588-68123607 | None:intergenic | 45.0% | |
| AGCTTAGCTAATACACCCTC+CGG | + | chr7_1:68123652-68123671 | Msa1033040:intron | 45.0% | |
| !!! | AATTAGTTTTTATTTTAATT+TGG | + | chr7_1:68119283-68119302 | Msa1033040:intron | 5.0% |
| !! | ATAAAAATTAAACTAAATAT+TGG | - | chr7_1:68121230-68121249 | None:intergenic | 5.0% |
| ! | GGGATAACAGAAGGGGGTTT+TGG | - | chr7_1:68119012-68119031 | None:intergenic | 50.0% |
| CGGTTGAGGAGAAAAGGTGA+CGG | - | chr7_1:68119038-68119057 | None:intergenic | 50.0% | |
| GTTGGAAATTGAAGGGGGGT+GGG | - | chr7_1:68119061-68119080 | None:intergenic | 50.0% | |
| TGTTGGAAATTGAAGGGGGG+TGG | - | chr7_1:68119062-68119081 | None:intergenic | 50.0% | |
| AGGTGGAAAGCGGTTAAAGG+GGG | - | chr7_1:68119089-68119108 | None:intergenic | 50.0% | |
| GAGGTGGAAAGCGGTTAAAG+GGG | - | chr7_1:68119090-68119109 | None:intergenic | 50.0% | |
| GGAGGTGGAAAGCGGTTAAA+GGG | - | chr7_1:68119091-68119110 | None:intergenic | 50.0% | |
| AAACGCAGTTGAGCAAAGGG+AGG | - | chr7_1:68119109-68119128 | None:intergenic | 50.0% | |
| CGGAAACGCAGTTGAGCAAA+GGG | - | chr7_1:68119112-68119131 | None:intergenic | 50.0% | |
| ACGGAAACGCAGTTGAGCAA+AGG | - | chr7_1:68119113-68119132 | None:intergenic | 50.0% | |
| !! | CTGATGATGGAGGAGGTTCA+TGG | + | chr7_1:68119224-68119243 | Msa1033040:CDS | 50.0% |
| !! | CCTCGGTGCCTCTAAATTCT+CGG | - | chr7_1:68120610-68120629 | None:intergenic | 50.0% |
| GGGATCAAACCTTTGGCATG+AGG | + | chr7_1:68120654-68120673 | Msa1033040:intron | 50.0% | |
| !! | TGGACTTAAAGGAGGGTGTC+TGG | - | chr7_1:68121026-68121045 | None:intergenic | 50.0% |
| AGACACCCTCCTTTAAGTCC+AGG | + | chr7_1:68121025-68121044 | Msa1033040:intron | 50.0% | |
| !! | TTTGGGCTTATGGGGGTGTT+TGG | + | chr7_1:68121128-68121147 | Msa1033040:intron | 50.0% |
| TGCAGACACCGGATTTGAAG+AGG | + | chr7_1:68121431-68121450 | Msa1033040:CDS | 50.0% | |
| GTTACACTTCCCGGAACATC+AGG | + | chr7_1:68121887-68121906 | Msa1033040:CDS | 50.0% | |
| ATCAGGTAGTGCCCTTCTGT+TGG | + | chr7_1:68121933-68121952 | Msa1033040:intron | 50.0% | |
| ! | CATTGGTGACACTAGAGGGA+AGG | + | chr7_1:68122087-68122106 | Msa1033040:CDS | 50.0% |
| AACACAGCTATGTCCTGAGG+CGG | - | chr7_1:68123585-68123604 | None:intergenic | 50.0% | |
| ACGGAGCGGGATAACAGAAG+GGG | - | chr7_1:68119019-68119038 | None:intergenic | 55.0% | |
| GACGGAGCGGGATAACAGAA+GGG | - | chr7_1:68119020-68119039 | None:intergenic | 55.0% | |
| TGACGGAGCGGGATAACAGA+AGG | - | chr7_1:68119021-68119040 | None:intergenic | 55.0% | |
| !! | AGGAGAAAAGGTGACGGAGC+GGG | - | chr7_1:68119032-68119051 | None:intergenic | 55.0% |
| !! | GAGGAGAAAAGGTGACGGAG+CGG | - | chr7_1:68119033-68119052 | None:intergenic | 55.0% |
| !! | CGGTTAAAGGGGGGTGTTGT+TGG | - | chr7_1:68119079-68119098 | None:intergenic | 55.0% |
| GGTGGAAAGCGGTTAAAGGG+GGG | - | chr7_1:68119088-68119107 | None:intergenic | 55.0% | |
| GGGAGGTGGAAAGCGGTTAA+AGG | - | chr7_1:68119092-68119111 | None:intergenic | 55.0% | |
| GAGCAAAGGGAGGTGGAAAG+CGG | - | chr7_1:68119099-68119118 | None:intergenic | 55.0% | |
| TGGCAGAGAGACGGGAATGA+CGG | - | chr7_1:68119132-68119151 | None:intergenic | 55.0% | |
| ATCGGAGATGGCAGAGAGAC+GGG | - | chr7_1:68119140-68119159 | None:intergenic | 55.0% | |
| CATCGGAGATGGCAGAGAGA+CGG | - | chr7_1:68119141-68119160 | None:intergenic | 55.0% | |
| CTCTCTGCCATCTCCGATGA+CGG | + | chr7_1:68119142-68119161 | Msa1033040:CDS | 55.0% | |
| !! | CCGAGAATTTAGAGGCACCG+AGG | + | chr7_1:68120607-68120626 | Msa1033040:intron | 55.0% |
| GGGTCAAGGGACCAACAGAA+GGG | - | chr7_1:68121947-68121966 | None:intergenic | 55.0% | |
| TGGGTCAAGGGACCAACAGA+AGG | - | chr7_1:68121948-68121967 | None:intergenic | 55.0% | |
| ACTAGAGGGAAGGCCATCAC+AGG | + | chr7_1:68122097-68122116 | Msa1033040:CDS | 55.0% | |
| AGCTTAGGCACAGCCTGTGA+TGG | - | chr7_1:68122113-68122132 | None:intergenic | 55.0% | |
| GGCTGTGCCTAAGCTTAAGC+AGG | + | chr7_1:68122118-68122137 | Msa1033040:CDS | 55.0% | |
| TTGTGATGCCCCACACCACT+TGG | - | chr7_1:68122941-68122960 | None:intergenic | 55.0% | |
| ! | AAGTGGTGTGGGGCATCACA+AGG | + | chr7_1:68122940-68122959 | Msa1033040:intron | 55.0% |
| ! | AGTGGTGTGGGGCATCACAA+GGG | + | chr7_1:68122941-68122960 | Msa1033040:intron | 55.0% |
| CGGAGCGGGATAACAGAAGG+GGG | - | chr7_1:68119018-68119037 | None:intergenic | 60.0% | |
| GGTGGGCGGTTGAGGAGAAA+AGG | - | chr7_1:68119044-68119063 | None:intergenic | 60.0% | |
| GGAAATTGAAGGGGGGTGGG+CGG | - | chr7_1:68119058-68119077 | None:intergenic | 60.0% | |
| CGCAGTTGAGCAAAGGGAGG+TGG | - | chr7_1:68119106-68119125 | None:intergenic | 60.0% | |
| ! | GCCATCTCCGATGACGGTTC+CGG | + | chr7_1:68119148-68119167 | Msa1033040:CDS | 60.0% |
| ! | ATCTCCGATGACGGTTCCGG+CGG | + | chr7_1:68119151-68119170 | Msa1033040:CDS | 60.0% |
| AGTACCGCCGGAACCGTCAT+CGG | - | chr7_1:68119158-68119177 | None:intergenic | 60.0% | |
| !! | TCCGGCGGTACTGGTGGAAA+TGG | + | chr7_1:68119166-68119185 | Msa1033040:CDS | 60.0% |
| GCCATTTCCACCAGTACCGC+CGG | - | chr7_1:68119170-68119189 | None:intergenic | 60.0% | |
| !! | GGCGGTACTGGTGGAAATGG+CGG | + | chr7_1:68119169-68119188 | Msa1033040:CDS | 60.0% |
| ACTGGTGGAAATGGCGGCTC+TGG | + | chr7_1:68119175-68119194 | Msa1033040:CDS | 60.0% | |
| !! | GAAATGGCGGCTCTGGAGGA+TGG | + | chr7_1:68119182-68119201 | Msa1033040:CDS | 60.0% |
| !! | GGCTCTGGAGGATGGAGTTC+CGG | + | chr7_1:68119190-68119209 | Msa1033040:CDS | 60.0% |
| TTGTCCATGTGGTCCGCCTC+AGG | + | chr7_1:68123569-68123588 | Msa1033040:intron | 60.0% | |
| ATGTCCTGAGGCGGACCACA+TGG | - | chr7_1:68123576-68123595 | None:intergenic | 60.0% | |
| GCCGGAACCGTCATCGGAGA+TGG | - | chr7_1:68119152-68119171 | None:intergenic | 65.0% | |
| ! | GATGACGGTTCCGGCGGTAC+TGG | + | chr7_1:68119157-68119176 | Msa1033040:CDS | 65.0% |
| ! | GGTGGAAATGGCGGCTCTGG+AGG | + | chr7_1:68119178-68119197 | Msa1033040:CDS | 65.0% |
| ! | GGGCGATGGGGCATCTCACA+AGG | + | chr7_1:68122663-68122682 | Msa1033040:intron | 65.0% |
| TCAGGCCTGGGAGTAGCTGC+AGG | + | chr7_1:68123877-68123896 | Msa1033040:intron | 65.0% | |
| CAGCTCCTGCAGCTACTCCC+AGG | - | chr7_1:68123885-68123904 | None:intergenic | 65.0% | |
| TGAAGGGGGGTGGGCGGTTG+AGG | - | chr7_1:68119052-68119071 | None:intergenic | 70.0% | |
| ! | GACGGTTCCGGCGGTACTGG+TGG | + | chr7_1:68119160-68119179 | Msa1033040:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 68118810 | 68124118 | 68118810 | ID=Msa1033040;Name=Msa1033040 |
| chr7_1 | mRNA | 68118810 | 68124118 | 68118810 | ID=Msa1033040-mRNA-1;Parent=Msa1033040;Name=Msa1033040-mRNA-1;_AED=0.28;_eAED=0.28;_QI=164|1|1|1|0.85|0.87|8|238|267 |
| chr7_1 | exon | 68118810 | 68119260 | 68118810 | ID=Msa1033040-mRNA-1:exon:15820;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68120135 | 68120222 | 68120135 | ID=Msa1033040-mRNA-1:exon:15821;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68121415 | 68121509 | 68121415 | ID=Msa1033040-mRNA-1:exon:15822;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68121865 | 68121937 | 68121865 | ID=Msa1033040-mRNA-1:exon:15823;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68122047 | 68122139 | 68122047 | ID=Msa1033040-mRNA-1:exon:15824;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68122268 | 68122354 | 68122268 | ID=Msa1033040-mRNA-1:exon:15825;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68123282 | 68123362 | 68123282 | ID=Msa1033040-mRNA-1:exon:15826;Parent=Msa1033040-mRNA-1 |
| chr7_1 | exon | 68123881 | 68124118 | 68123881 | ID=Msa1033040-mRNA-1:exon:15827;Parent=Msa1033040-mRNA-1 |
| chr7_1 | five_prime_UTR | 68118810 | 68118973 | 68118810 | ID=Msa1033040-mRNA-1:five_prime_utr;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68118974 | 68119260 | 68118974 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68120135 | 68120222 | 68120135 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68121415 | 68121509 | 68121415 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68121865 | 68121937 | 68121865 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68122047 | 68122139 | 68122047 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68122268 | 68122354 | 68122268 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | CDS | 68123282 | 68123362 | 68123282 | ID=Msa1033040-mRNA-1:cds;Parent=Msa1033040-mRNA-1 |
| chr7_1 | three_prime_UTR | 68123881 | 68124118 | 68123881 | ID=Msa1033040-mRNA-1:three_prime_utr;Parent=Msa1033040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
