Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029060 | XP_003624197.1 | 96.029 | 277 | 9 | 1 | 1 | 277 | 1 | 275 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029060 | sp|Q42783|BCCP_SOYBN | 67.407 | 270 | 69 | 7 | 18 | 277 | 1 | 261 | 1.14e-94 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029060 | G7KRK6 | 96.029 | 277 | 9 | 1 | 1 | 277 | 1 | 275 | 0.0 | 520 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa1029060 | -0.800981 | 1.116573e-48 | -8.615850e-47 |
| Msa0029850 | Msa1029060 | -0.828527 | 8.553895e-55 | -8.615850e-47 |
| Msa0032470 | Msa1029060 | -0.840311 | 9.386320e-58 | -8.615850e-47 |
| Msa0034400 | Msa1029060 | -0.818779 | 1.640114e-52 | -8.615850e-47 |
| Msa0042550 | Msa1029060 | -0.806719 | 7.175081e-50 | -8.615850e-47 |
| Msa0043980 | Msa1029060 | -0.800860 | 1.182270e-48 | -8.615850e-47 |
| Msa0077180 | Msa1029060 | -0.846591 | 1.973375e-59 | -8.615850e-47 |
| Msa0083090 | Msa1029060 | -0.834745 | 2.508749e-56 | -8.615850e-47 |
| Msa0083130 | Msa1029060 | -0.817666 | 2.929771e-52 | -8.615850e-47 |
| Msa0086420 | Msa1029060 | -0.815248 | 1.019038e-51 | -8.615850e-47 |
| Msa0090550 | Msa1029060 | -0.802162 | 6.394382e-49 | -8.615850e-47 |
| Msa0104800 | Msa1029060 | -0.802531 | 5.368605e-49 | -8.615850e-47 |
| Msa0120530 | Msa1029060 | 0.822841 | 1.908908e-53 | -8.615850e-47 |
| Msa0616550 | Msa1029060 | -0.812503 | 4.103025e-51 | -8.615850e-47 |
| Msa0623990 | Msa1029060 | -0.816218 | 6.195024e-52 | -8.615850e-47 |
| Msa0624060 | Msa1029060 | -0.827016 | 1.974251e-54 | -8.615850e-47 |
| Msa0640940 | Msa1029060 | -0.803884 | 2.817393e-49 | -8.615850e-47 |
| Msa0654310 | Msa1029060 | -0.804138 | 2.494302e-49 | -8.615850e-47 |
| Msa0676130 | Msa1029060 | -0.818874 | 1.561054e-52 | -8.615850e-47 |
| Msa0676180 | Msa1029060 | -0.818992 | 1.467264e-52 | -8.615850e-47 |
| Msa0679360 | Msa1029060 | -0.804240 | 2.375284e-49 | -8.615850e-47 |
| Msa0696540 | Msa1029060 | -0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0705990 | Msa1029060 | -0.809194 | 2.134595e-50 | -8.615850e-47 |
| Msa0732600 | Msa1029060 | -0.805728 | 1.160605e-49 | -8.615850e-47 |
| Msa0745260 | Msa1029060 | 0.808882 | 2.488852e-50 | -8.615850e-47 |
| Msa0746440 | Msa1029060 | -0.828749 | 7.561188e-55 | -8.615850e-47 |
| Msa0749440 | Msa1029060 | -0.821241 | 4.481826e-53 | -8.615850e-47 |
| Msa0750850 | Msa1029060 | -0.814830 | 1.261811e-51 | -8.615850e-47 |
| Msa0751850 | Msa1029060 | -0.802197 | 6.288441e-49 | -8.615850e-47 |
| Msa0763890 | Msa1029060 | -0.828565 | 8.376015e-55 | -8.615850e-47 |
| Msa0763920 | Msa1029060 | -0.837364 | 5.430357e-57 | -8.615850e-47 |
| Msa0773590 | Msa1029060 | -0.807724 | 4.394619e-50 | -8.615850e-47 |
| Msa0796250 | Msa1029060 | -0.806770 | 6.998905e-50 | -8.615850e-47 |
| Msa0796300 | Msa1029060 | -0.819726 | 9.980921e-53 | -8.615850e-47 |
| Msa0805420 | Msa1029060 | -0.861640 | 8.898568e-64 | -8.615850e-47 |
| Msa0811040 | Msa1029060 | -0.800125 | 1.668656e-48 | -8.615850e-47 |
| Msa0818060 | Msa1029060 | -0.803523 | 3.347047e-49 | -8.615850e-47 |
| Msa0831150 | Msa1029060 | -0.811325 | 7.409525e-51 | -8.615850e-47 |
| Msa0831850 | Msa1029060 | -0.809139 | 2.192778e-50 | -8.615850e-47 |
| Msa0125050 | Msa1029060 | -0.802024 | 6.824660e-49 | -8.615850e-47 |
| Msa0129550 | Msa1029060 | -0.822787 | 1.965152e-53 | -8.615850e-47 |
| Msa0138020 | Msa1029060 | -0.804827 | 1.791898e-49 | -8.615850e-47 |
| Msa0139550 | Msa1029060 | 0.805940 | 1.047053e-49 | -8.615850e-47 |
| Msa0140500 | Msa1029060 | 0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa0142500 | Msa1029060 | -0.811717 | 6.087501e-51 | -8.615850e-47 |
| Msa0160960 | Msa1029060 | -0.814990 | 1.162769e-51 | -8.615850e-47 |
| Msa0163770 | Msa1029060 | 0.814967 | 1.176391e-51 | -8.615850e-47 |
| Msa0169820 | Msa1029060 | -0.824652 | 7.187035e-54 | -8.615850e-47 |
| Msa0172080 | Msa1029060 | -0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0175050 | Msa1029060 | -0.800236 | 1.584432e-48 | -8.615850e-47 |
| Msa0175420 | Msa1029060 | -0.824702 | 6.993255e-54 | -8.615850e-47 |
| Msa0175540 | Msa1029060 | -0.807428 | 5.079281e-50 | -8.615850e-47 |
| Msa0178510 | Msa1029060 | -0.812498 | 4.113193e-51 | -8.615850e-47 |
| Msa0183010 | Msa1029060 | 0.835452 | 1.664427e-56 | -8.615850e-47 |
| Msa0186950 | Msa1029060 | -0.817641 | 2.968343e-52 | -8.615850e-47 |
| Msa0189030 | Msa1029060 | -0.812187 | 4.809047e-51 | -8.615850e-47 |
| Msa0194080 | Msa1029060 | -0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa0200650 | Msa1029060 | -0.829429 | 5.172899e-55 | -8.615850e-47 |
| Msa0207040 | Msa1029060 | 0.821285 | 4.378399e-53 | -8.615850e-47 |
| Msa0218370 | Msa1029060 | -0.801680 | 8.033381e-49 | -8.615850e-47 |
| Msa0230640 | Msa1029060 | 0.831695 | 1.442820e-55 | -8.615850e-47 |
| Msa0232340 | Msa1029060 | -0.823937 | 1.058524e-53 | -8.615850e-47 |
| Msa0235940 | Msa1029060 | -0.822524 | 2.262723e-53 | -8.615850e-47 |
| Msa0236420 | Msa1029060 | -0.837591 | 4.750398e-57 | -8.615850e-47 |
| Msa0366210 | Msa1029060 | -0.811198 | 7.892600e-51 | -8.615850e-47 |
| Msa0381600 | Msa1029060 | 0.805013 | 1.638142e-49 | -8.615850e-47 |
| Msa0381610 | Msa1029060 | 0.809780 | 1.597309e-50 | -8.615850e-47 |
| Msa0389610 | Msa1029060 | 0.859921 | 2.960216e-63 | -8.615850e-47 |
| Msa0393620 | Msa1029060 | -0.808074 | 3.703039e-50 | -8.615850e-47 |
| Msa0394260 | Msa1029060 | -0.809819 | 1.567185e-50 | -8.615850e-47 |
| Msa0394470 | Msa1029060 | -0.802422 | 5.651995e-49 | -8.615850e-47 |
| Msa0398200 | Msa1029060 | -0.819570 | 1.083492e-52 | -8.615850e-47 |
| Msa0414140 | Msa1029060 | -0.824883 | 6.340079e-54 | -8.615850e-47 |
| Msa0422180 | Msa1029060 | -0.814182 | 1.754728e-51 | -8.615850e-47 |
| Msa0433410 | Msa1029060 | 0.826349 | 2.849123e-54 | -8.615850e-47 |
| Msa0468320 | Msa1029060 | -0.801028 | 1.092037e-48 | -8.615850e-47 |
| Msa0472960 | Msa1029060 | 0.870049 | 1.956423e-66 | -8.615850e-47 |
| Msa0992580 | Msa1029060 | -0.843819 | 1.108532e-58 | -8.615850e-47 |
| Msa0992600 | Msa1029060 | -0.839447 | 1.576080e-57 | -8.615850e-47 |
| Msa1006010 | Msa1029060 | 0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa1008750 | Msa1029060 | -0.821758 | 3.405617e-53 | -8.615850e-47 |
| Msa1029060 | Msa1033040 | 0.806151 | 9.456206e-50 | -8.615850e-47 |
| Msa1029060 | Msa1048070 | 0.818661 | 1.744811e-52 | -8.615850e-47 |
| Msa1029060 | Msa1063420 | -0.819626 | 1.052169e-52 | -8.615850e-47 |
| Msa1029060 | Msa1080330 | 0.964885 | 6.803197e-124 | -8.615850e-47 |
| Msa1029060 | Msa1081790 | 0.834691 | 2.588693e-56 | -8.615850e-47 |
| Msa1029060 | Msa1096060 | -0.809555 | 1.785831e-50 | -8.615850e-47 |
| Msa1029060 | Msa1100130 | 0.846698 | 1.844872e-59 | -8.615850e-47 |
| Msa1029060 | Msa1102790 | -0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa1029060 | Msa1121110 | -0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa1029060 | Msa1143020 | -0.817148 | 3.831703e-52 | -8.615850e-47 |
| Msa1029060 | Msa1156150 | 0.964529 | 1.928093e-123 | -8.615850e-47 |
| Msa1029060 | Msa1166090 | 0.819961 | 8.823136e-53 | -8.615850e-47 |
| Msa1029060 | Msa1177780 | -0.820627 | 6.207292e-53 | -8.615850e-47 |
| Msa1029060 | Msa1191050 | 0.831733 | 1.412196e-55 | -8.615850e-47 |
| Msa1029060 | Msa1196610 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa1029060 | Msa1207310 | -0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa1029060 | Msa1224580 | 0.800201 | 1.610540e-48 | -8.615850e-47 |
| Msa1029060 | Msa1242940 | -0.801935 | 7.118803e-49 | -8.615850e-47 |
| Msa1029060 | Msa1244720 | 0.828289 | 9.763587e-55 | -8.615850e-47 |
| Msa1029060 | Msa1248830 | -0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa1029060 | Msa1250110 | -0.816108 | 6.555022e-52 | -8.615850e-47 |
| Msa1029060 | Msa1250730 | -0.828738 | 7.607597e-55 | -8.615850e-47 |
| Msa1029060 | Msa1257800 | 0.806639 | 7.459236e-50 | -8.615850e-47 |
| Msa1029060 | Msa1264620 | -0.802702 | 4.948469e-49 | -8.615850e-47 |
| Msa1029060 | Msa1270660 | -0.836080 | 1.153617e-56 | -8.615850e-47 |
| Msa1029060 | Msa1270730 | -0.814251 | 1.694403e-51 | -8.615850e-47 |
| Msa1029060 | Msa1295330 | -0.820477 | 6.719118e-53 | -8.615850e-47 |
| Msa1029060 | Msa1305350 | -0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa1029060 | Msa1305810 | -0.810165 | 1.320332e-50 | -8.615850e-47 |
| Msa1029060 | Msa1307550 | -0.819322 | 1.234391e-52 | -8.615850e-47 |
| Msa1029060 | Msa1308870 | -0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa1029060 | Msa1316440 | -0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa1029060 | Msa1325860 | 0.828448 | 8.939686e-55 | -8.615850e-47 |
| Msa1029060 | Msa1328520 | -0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa1029060 | Msa1335230 | -0.818441 | 1.957436e-52 | -8.615850e-47 |
| Msa1029060 | Msa1335710 | -0.815097 | 1.100934e-51 | -8.615850e-47 |
| Msa1029060 | Msa1346840 | -0.807287 | 5.442048e-50 | -8.615850e-47 |
| Msa1029060 | Msa1349450 | -0.808306 | 3.304552e-50 | -8.615850e-47 |
| Msa1029060 | Msa1369920 | 0.823000 | 1.753099e-53 | -8.615850e-47 |
| Msa1029060 | Msa1370590 | -0.807801 | 4.233496e-50 | -8.615850e-47 |
| Msa1029060 | Msa1371940 | -0.818846 | 1.583846e-52 | -8.615850e-47 |
| Msa1029060 | Msa1372150 | -0.812649 | 3.811890e-51 | -8.615850e-47 |
| Msa1029060 | Msa1372290 | -0.856497 | 3.090341e-62 | -8.615850e-47 |
| Msa1029060 | Msa1376130 | -0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa1029060 | Msa1377570 | -0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa1029060 | Msa1378410 | -0.828065 | 1.105683e-54 | -8.615850e-47 |
| Msa1029060 | Msa1380900 | -0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa1029060 | Msa1384100 | -0.810905 | 9.134903e-51 | -8.615850e-47 |
| Msa1029060 | Msa1396400 | 0.820671 | 6.064226e-53 | -8.615850e-47 |
| Msa1029060 | Msa1401460 | -0.814752 | 1.313104e-51 | -8.615850e-47 |
| Msa1029060 | Msa1401990 | -0.823039 | 1.716733e-53 | -8.615850e-47 |
| Msa1029060 | Msa1404240 | 0.847326 | 1.241188e-59 | -8.615850e-47 |
| Msa1029060 | Msa1404300 | -0.815252 | 1.017070e-51 | -8.615850e-47 |
| Msa1029060 | Msa1406110 | 0.827194 | 1.790214e-54 | -8.615850e-47 |
| Msa1029060 | Msa1414420 | -0.800459 | 1.426778e-48 | -8.615850e-47 |
| Msa1029060 | Msa1423820 | -0.810153 | 1.328011e-50 | -8.615850e-47 |
| Msa1029060 | Msa1428780 | -0.815133 | 1.080772e-51 | -8.615850e-47 |
| Msa1029060 | Msa1437130 | -0.818092 | 2.347871e-52 | -8.615850e-47 |
| Msa1029060 | Msa1437730 | -0.810774 | 9.751973e-51 | -8.615850e-47 |
| Msa1029060 | Msa1442790 | -0.839957 | 1.161063e-57 | -8.615850e-47 |
| Msa1029060 | Msa1444120 | -0.813474 | 2.512810e-51 | -8.615850e-47 |
| Msa1029060 | Msa1445390 | 0.802036 | 6.787340e-49 | -8.615850e-47 |
| Msa1029060 | Msa1454890 | -0.800230 | 1.588832e-48 | -8.615850e-47 |
| Msa0241140 | Msa1029060 | -0.801801 | 7.587250e-49 | -8.615850e-47 |
| Msa0270960 | Msa1029060 | -0.837272 | 5.732777e-57 | -8.615850e-47 |
| Msa0271790 | Msa1029060 | -0.855416 | 6.404203e-62 | -8.615850e-47 |
| Msa0307310 | Msa1029060 | -0.804668 | 1.933972e-49 | -8.615850e-47 |
| Msa0309270 | Msa1029060 | -0.832712 | 8.082549e-56 | -8.615850e-47 |
| Msa0310430 | Msa1029060 | -0.850446 | 1.689522e-60 | -8.615850e-47 |
| Msa0322680 | Msa1029060 | -0.804609 | 1.989770e-49 | -8.615850e-47 |
| Msa0347750 | Msa1029060 | -0.805792 | 1.125133e-49 | -8.615850e-47 |
| Msa0347950 | Msa1029060 | -0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0350320 | Msa1029060 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
| Msa0482940 | Msa1029060 | -0.813151 | 2.959740e-51 | -8.615850e-47 |
| Msa0485490 | Msa1029060 | -0.813977 | 1.947643e-51 | -8.615850e-47 |
| Msa0510710 | Msa1029060 | 0.813395 | 2.615774e-51 | -8.615850e-47 |
| Msa0518440 | Msa1029060 | -0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0521010 | Msa1029060 | -0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0528610 | Msa1029060 | 0.839934 | 1.176968e-57 | -8.615850e-47 |
| Msa0547030 | Msa1029060 | 0.828987 | 6.621757e-55 | -8.615850e-47 |
| Msa0566350 | Msa1029060 | -0.864006 | 1.657803e-64 | -8.615850e-47 |
| Msa0566750 | Msa1029060 | -0.863702 | 2.062119e-64 | -8.615850e-47 |
| Msa0580180 | Msa1029060 | -0.806811 | 6.862996e-50 | -8.615850e-47 |
| Msa0600450 | Msa1029060 | -0.809791 | 1.589359e-50 | -8.615850e-47 |
| Msa0842770 | Msa1029060 | -0.845364 | 4.253215e-59 | -8.615850e-47 |
| Msa0844110 | Msa1029060 | -0.824448 | 8.027606e-54 | -8.615850e-47 |
| Msa0866400 | Msa1029060 | -0.816778 | 4.641030e-52 | -8.615850e-47 |
| Msa0866410 | Msa1029060 | -0.814151 | 1.783013e-51 | -8.615850e-47 |
| Msa0877710 | Msa1029060 | -0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0892570 | Msa1029060 | -0.802304 | 5.979053e-49 | -8.615850e-47 |
| Msa0921420 | Msa1029060 | -0.809470 | 1.862927e-50 | -8.615850e-47 |
| Msa0943970 | Msa1029060 | -0.807215 | 5.635901e-50 | -8.615850e-47 |
| Msa0946280 | Msa1029060 | 0.852241 | 5.254391e-61 | -8.615850e-47 |
| Msa0958030 | Msa1029060 | -0.830570 | 2.725820e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029060 | MtrunA17_Chr7g0249511 | 96.029 | 277 | 9 | 1 | 1 | 277 | 1 | 275 | 0.0 | 520 |
| Msa1029060 | MtrunA17_Chr6g0454551 | 55.046 | 218 | 88 | 5 | 66 | 276 | 62 | 276 | 2.09e-62 | 197 |
| Msa1029060 | MtrunA17_Chr7g0218731 | 52.423 | 227 | 88 | 4 | 66 | 276 | 63 | 285 | 8.34e-59 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029060 | AT5G16390.1 | 47.635 | 296 | 116 | 8 | 2 | 277 | 3 | 279 | 2.18e-71 | 221 |
| Msa1029060 | AT5G15530.1 | 51.364 | 220 | 81 | 4 | 66 | 276 | 51 | 253 | 9.13e-62 | 196 |
| Msa1029060 | AT5G16390.2 | 45.896 | 268 | 106 | 8 | 2 | 249 | 3 | 251 | 5.37e-55 | 178 |
Find 87 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAGAGAGTTGTTGGAATT+AGG | 0.229652 | 7_1:+62309581 | None:intergenic |
| TCAACATCTGATTTGGCTTT+AGG | 0.237476 | 7_1:+62308689 | None:intergenic |
| GCTCTATTCAATCACAAATA+AGG | 0.243185 | 7_1:+62304264 | None:intergenic |
| CGGTGGTTCAACATCTGATT+TGG | 0.261689 | 7_1:+62308682 | None:intergenic |
| CTTACAGTATCAACGCTTAC+AGG | 0.270452 | 7_1:+62304374 | None:intergenic |
| GAATGTTTACCTCATTTAAC+TGG | 0.275310 | 7_1:+62309412 | None:intergenic |
| TTCAGTTTGAGTTTGATTCA+TGG | 0.304360 | 7_1:-62309726 | Msa1029060:exon |
| AGAGGCGGACGTGATGATTT+AGG | 0.305522 | 7_1:+62307858 | None:intergenic |
| TTCAACAAGGTTGCCCTTGA+TGG | 0.321266 | 7_1:-62308731 | Msa1029060:intron |
| GCAGGTTGAGGAGCATATTC+TGG | 0.327362 | 7_1:+62307987 | None:intergenic |
| ATGAGAAAAGCGTGCAGATT+TGG | 0.332822 | 7_1:+62309631 | None:intergenic |
| TCAGTTGAACCATCTTCTTC+AGG | 0.335118 | 7_1:-62308650 | Msa1029060:CDS |
| TACATGATTGGACTATGTTT+CGG | 0.364024 | 7_1:-62304078 | Msa1029060:three_prime_UTR |
| TTGAGTAGTGTGAGGCGTAT+AGG | 0.368588 | 7_1:-62304193 | Msa1029060:three_prime_UTR |
| ATTTAACTGGGCCTTAACCC+TGG | 0.377458 | 7_1:+62309425 | None:intergenic |
| GCTATTATGCCCCAGGGTTA+AGG | 0.391263 | 7_1:-62309436 | Msa1029060:CDS |
| TAAACTGTGAAGTACTAATC+AGG | 0.422789 | 7_1:-62308031 | Msa1029060:CDS |
| CTCTATTCAATCACAAATAA+GGG | 0.424132 | 7_1:+62304265 | None:intergenic |
| AGAGTATGTGATGGCGCAAC+AGG | 0.424416 | 7_1:+62307930 | None:intergenic |
| GGGCATAATAGCATATGATT+AGG | 0.451440 | 7_1:+62309447 | None:intergenic |
| TTTAACTGGGCCTTAACCCT+GGG | 0.451990 | 7_1:+62309426 | None:intergenic |
| TGTCGGATCGATGAAATCTA+AGG | 0.457102 | 7_1:+62309768 | None:intergenic |
| GGCTTTAGGAGGCACATCAT+TGG | 0.466527 | 7_1:+62308703 | None:intergenic |
| GTATTCACAACCTTCGCAAA+CGG | 0.468806 | 7_1:-62307958 | Msa1029060:CDS |
| GAAGTTGGCGTTGAAGGAGC+AGG | 0.470077 | 7_1:+62307900 | None:intergenic |
| TGAACCATCTTCTTCAGGCT+TGG | 0.483109 | 7_1:-62308645 | Msa1029060:CDS |
| ATCATATGCTATTATGCCCC+AGG | 0.484549 | 7_1:-62309443 | Msa1029060:CDS |
| ACTATGCAGGCTGATAAGTC+AGG | 0.498671 | 7_1:-62304431 | Msa1029060:intron |
| CCTCTTAAAAGCCCCATGGC+AGG | 0.499067 | 7_1:-62307840 | Msa1029060:CDS |
| AACGGAGGTTCACCCGGTGC+AGG | 0.503250 | 7_1:+62307801 | None:intergenic |
| TCGGTAGAATGTCCCTGCCA+TGG | 0.503817 | 7_1:+62307827 | None:intergenic |
| TGGAATTAGGAGAGAGACGA+GGG | 0.509409 | 7_1:+62309594 | None:intergenic |
| GATGATTTAGGTAGCTTGAC+AGG | 0.515867 | 7_1:+62307870 | None:intergenic |
| GACGGAGTATTCAAGTAGAC+TGG | 0.518813 | 7_1:-62304240 | Msa1029060:three_prime_UTR |
| AGAGAGACGAGGGAAAGTGA+TGG | 0.519967 | 7_1:+62309604 | None:intergenic |
| GAGACGAGGGAAAGTGATGG+AGG | 0.521390 | 7_1:+62309607 | None:intergenic |
| GTTCACCCGGTGCAGGACTT+CGG | 0.523121 | 7_1:+62307808 | None:intergenic |
| GGTGGGAGACGAAGTAAAGA+AGG | 0.523639 | 7_1:-62307695 | Msa1029060:CDS |
| TGAGGAGCATATTCTGGTTG+AGG | 0.524502 | 7_1:+62307993 | None:intergenic |
| ACATCTGATTTGGCTTTAGG+AGG | 0.528612 | 7_1:+62308692 | None:intergenic |
| ACAGGTGGCGCCGTTTGCGA+AGG | 0.536548 | 7_1:+62307948 | None:intergenic |
| AGAAAAGCGTGCAGATTTGG+TGG | 0.540319 | 7_1:+62309634 | None:intergenic |
| CTCTTAAAAGCCCCATGGCA+GGG | 0.542024 | 7_1:-62307839 | Msa1029060:CDS |
| AGAAGGCGAAGTGGAGGACA+AGG | 0.543674 | 7_1:+62309697 | None:intergenic |
| GAATACAACAATGCAGGTTG+AGG | 0.544649 | 7_1:+62307975 | None:intergenic |
| GAAGAAGATGGTTCAACTGA+AGG | 0.548422 | 7_1:+62308653 | None:intergenic |
| TTAGGTAGCTTGACAGGAGG+GGG | 0.550253 | 7_1:+62307876 | None:intergenic |
| GGAAGATCTACCTTCACAAA+CGG | 0.553357 | 7_1:+62307783 | None:intergenic |
| AGCAGCAGAAGGCGAAGTGG+AGG | 0.555447 | 7_1:+62309691 | None:intergenic |
| GGATGATAATCTGCAGGTCG+TGG | 0.562572 | 7_1:-62304219 | Msa1029060:three_prime_UTR |
| ATTTAGGTAGCTTGACAGGA+GGG | 0.566371 | 7_1:+62307874 | None:intergenic |
| TAGACTGGATGATAATCTGC+AGG | 0.567583 | 7_1:-62304225 | Msa1029060:three_prime_UTR |
| TTCACAAACGGAGGTTCACC+CGG | 0.577004 | 7_1:+62307795 | None:intergenic |
| CATCATTGGAAGAACCATCA+AGG | 0.577639 | 7_1:+62308717 | None:intergenic |
| TGTTGCGCCATCACATACTC+TGG | 0.579696 | 7_1:-62307928 | Msa1029060:CDS |
| AGGAGCAGCAGAAGGCGAAG+TGG | 0.582368 | 7_1:+62309688 | None:intergenic |
| TTGTGATTGAATAGAGCTGA+CGG | 0.583002 | 7_1:-62304258 | Msa1029060:exon |
| TCTGCCAAGCCTGAAGAAGA+TGG | 0.583819 | 7_1:+62308641 | None:intergenic |
| ATTCTACCGAAGTCCTGCAC+CGG | 0.585909 | 7_1:-62307814 | Msa1029060:CDS |
| CATAATAGCATATGATTAGG+TGG | 0.587014 | 7_1:+62309450 | None:intergenic |
| AGTACTAATCAGGAAGAAAG+AGG | 0.587578 | 7_1:-62308021 | Msa1029060:CDS |
| GGTTGTGAATACAACAATGC+AGG | 0.591023 | 7_1:+62307969 | None:intergenic |
| GTGGGAGACGAAGTAAAGAA+GGG | 0.592291 | 7_1:-62307694 | Msa1029060:CDS |
| TTTAGGTAGCTTGACAGGAG+GGG | 0.592826 | 7_1:+62307875 | None:intergenic |
| GAAGCTGCAACAGTAACAGT+AGG | 0.602939 | 7_1:+62309668 | None:intergenic |
| TTGGAATTAGGAGAGAGACG+AGG | 0.607140 | 7_1:+62309593 | None:intergenic |
| GGTTCAACTGAAGGTGCGGT+CGG | 0.607776 | 7_1:+62308662 | None:intergenic |
| GTATGTGATGGCGCAACAGG+TGG | 0.609933 | 7_1:+62307933 | None:intergenic |
| AGGCGAAGTGGAGGACAAGG+AGG | 0.614326 | 7_1:+62309700 | None:intergenic |
| TTCTACCGAAGTCCTGCACC+GGG | 0.615606 | 7_1:-62307813 | Msa1029060:CDS |
| ATCATTGGAAGAACCATCAA+GGG | 0.616659 | 7_1:+62308718 | None:intergenic |
| AATGTTTACCTCATTTAACT+GGG | 0.618081 | 7_1:+62309413 | None:intergenic |
| GGAAGAGCCAGAGTATGTGA+TGG | 0.623698 | 7_1:+62307921 | None:intergenic |
| CTATGCAGGCTGATAAGTCA+GGG | 0.634299 | 7_1:-62304430 | Msa1029060:intron |
| GGTTAAGGCCCAGTTAAATG+AGG | 0.635624 | 7_1:-62309421 | Msa1029060:intron |
| GGGTGAACCTCCGTTTGTGA+AGG | 0.635773 | 7_1:-62307793 | Msa1029060:intron |
| TCATATGCTATTATGCCCCA+GGG | 0.636266 | 7_1:-62309442 | Msa1029060:CDS |
| GACTATAGTTGAAATAATCG+CGG | 0.639005 | 7_1:-62304408 | Msa1029060:CDS |
| GATTTAGGTAGCTTGACAGG+AGG | 0.644259 | 7_1:+62307873 | None:intergenic |
| CGTGGTAGTTGAGTAGTGTG+AGG | 0.652911 | 7_1:-62304201 | Msa1029060:three_prime_UTR |
| TCCGCCTCTTAAAAGCCCCA+TGG | 0.655613 | 7_1:-62307844 | Msa1029060:CDS |
| GTAACAGTAGGAGCAGCAGA+AGG | 0.655990 | 7_1:+62309680 | None:intergenic |
| AGATGGTTCAACTGAAGGTG+CGG | 0.664821 | 7_1:+62308658 | None:intergenic |
| TTAACTGGGCCTTAACCCTG+GGG | 0.667597 | 7_1:+62309427 | None:intergenic |
| TGGGAGACGAAGTAAAGAAG+GGG | 0.685600 | 7_1:-62307693 | Msa1029060:CDS |
| GGTAGAATGTCCCTGCCATG+GGG | 0.689727 | 7_1:+62307829 | None:intergenic |
| AGATCTACCTTCACAAACGG+AGG | 0.698623 | 7_1:+62307786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATAATATTATTTTATT+TGG | - | chr7_1:62306454-62306473 | Msa1029060:intron | 0.0% |
| !! | TAAGAAAAATAGTAATAAAT+AGG | - | chr7_1:62305423-62305442 | Msa1029060:intron | 10.0% |
| !! | AAGAAAAATAGTAATAAATA+GGG | - | chr7_1:62305424-62305443 | Msa1029060:intron | 10.0% |
| !!! | AAGTTTTTATGTTATTTTTA+TGG | - | chr7_1:62306096-62306115 | Msa1029060:intron | 10.0% |
| !!! | CTTTATTTAAATGTTGAATT+TGG | - | chr7_1:62306570-62306589 | Msa1029060:intron | 15.0% |
| !!! | TTTCTGAATATTTTGTTTTT+CGG | - | chr7_1:62307848-62307867 | Msa1029060:CDS | 15.0% |
| !!! | GTATATTAGGTTTTTATATT+GGG | + | chr7_1:62308315-62308334 | None:intergenic | 15.0% |
| !!! | TGTATATTAGGTTTTTATAT+TGG | + | chr7_1:62308316-62308335 | None:intergenic | 15.0% |
| !!! | TTCTTTTTGTTTTCTTTTTT+TGG | - | chr7_1:62308666-62308685 | Msa1029060:CDS | 15.0% |
| !!! | GTTTTGTTAGTATTTAAATA+AGG | - | chr7_1:62308758-62308777 | Msa1029060:intron | 15.0% |
| !!! | TTATTATTTTAGTTCAGAAT+AGG | - | chr7_1:62309047-62309066 | Msa1029060:intron | 15.0% |
| !! | CGAAGTATAGATATTAATTT+AGG | + | chr7_1:62304184-62304203 | None:intergenic | 20.0% |
| !! | TCAAATAATTCAATTCAAAC+AGG | + | chr7_1:62304450-62304469 | None:intergenic | 20.0% |
| !! | AACTTTCAAAACAAGAAAAT+TGG | - | chr7_1:62305388-62305407 | Msa1029060:intron | 20.0% |
| !! | ATCTTAAAGAACTGTTAATT+TGG | - | chr7_1:62305511-62305530 | Msa1029060:intron | 20.0% |
| !!! | ATTCTTTGTATAATGCTTTT+TGG | - | chr7_1:62305964-62305983 | Msa1029060:intron | 20.0% |
| !! | AAATATATTACGCATTTATG+TGG | + | chr7_1:62306237-62306256 | None:intergenic | 20.0% |
| !!! | TCTTAATTTCTTTTGAGAAA+TGG | - | chr7_1:62306309-62306328 | Msa1029060:intron | 20.0% |
| !! | AACATTTAAATAAAGCAAAG+AGG | + | chr7_1:62306565-62306584 | None:intergenic | 20.0% |
| !!! | CAGTTTTATCAATATAAACA+TGG | - | chr7_1:62306804-62306823 | Msa1029060:intron | 20.0% |
| !! | AAATAAAAGATGTTCAAAAG+TGG | - | chr7_1:62306944-62306963 | Msa1029060:intron | 20.0% |
| !!! | TCTTATTGTGTTAGTTTATT+AGG | - | chr7_1:62307037-62307056 | Msa1029060:intron | 20.0% |
| !!! | TAAAACATTTTTGTGTTATG+AGG | + | chr7_1:62307362-62307381 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTGTAGAATTGT+TGG | + | chr7_1:62307634-62307653 | None:intergenic | 20.0% |
| !! | TTAATGATGATTCGATATAT+TGG | - | chr7_1:62307990-62308009 | Msa1029060:CDS | 20.0% |
| !! | TAAGACCTTATCTTTAATAT+AGG | + | chr7_1:62308031-62308050 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTCTTTTTTTGGT+AGG | - | chr7_1:62308670-62308689 | Msa1029060:CDS | 20.0% |
| !! | TGTTCACATATTATGAAATA+TGG | + | chr7_1:62308737-62308756 | None:intergenic | 20.0% |
| !! | ATATTTCATAATATGTGAAC+AGG | - | chr7_1:62308736-62308755 | Msa1029060:intron | 20.0% |
| !! | ATAAGAATACAACTATTAGA+AGG | + | chr7_1:62308926-62308945 | None:intergenic | 20.0% |
| !!! | CTTAAATTTGATTTCTAACT+TGG | - | chr7_1:62309153-62309172 | Msa1029060:intron | 20.0% |
| !!! | TGACTTTTTTATTTGCATTT+TGG | + | chr7_1:62309188-62309207 | None:intergenic | 20.0% |
| !! | TTGATACTGTAAGTATATTT+CGG | - | chr7_1:62309345-62309364 | Msa1029060:intron | 20.0% |
| !!! | ATTTTTAACTTCTACATGAT+TGG | - | chr7_1:62309619-62309638 | Msa1029060:CDS | 20.0% |
| !!! | ATTTTTGTAAAAGAAAGGAT+GGG | + | chr7_1:62309793-62309812 | None:intergenic | 20.0% |
| !!! | AATCCATTTTTGTAAAAGAA+AGG | + | chr7_1:62309798-62309817 | None:intergenic | 20.0% |
| ! | AATGTTTACCTCATTTAACT+GGG | + | chr7_1:62304299-62304318 | None:intergenic | 25.0% |
| !! | TTTATTCAAATCTGAAGTGT+CGG | - | chr7_1:62304716-62304735 | Msa1029060:intron | 25.0% |
| !! | TTTTCCTCATTTAATCTAAG+AGG | - | chr7_1:62304766-62304785 | Msa1029060:intron | 25.0% |
| ! | TTTCCTCATTTAATCTAAGA+GGG | - | chr7_1:62304767-62304786 | Msa1029060:intron | 25.0% |
| !!! | ATACATTTCTATGCTGATTT+TGG | - | chr7_1:62304940-62304959 | Msa1029060:intron | 25.0% |
| !! | CAACTATTAATTTTGAACAG+AGG | + | chr7_1:62305186-62305205 | None:intergenic | 25.0% |
| ! | AGGTATAATTAATGATGCAT+TGG | + | chr7_1:62305262-62305281 | None:intergenic | 25.0% |
| ! | TCTGACATATAATTAATGAG+GGG | + | chr7_1:62305294-62305313 | None:intergenic | 25.0% |
| ! | GTCTGACATATAATTAATGA+GGG | + | chr7_1:62305295-62305314 | None:intergenic | 25.0% |
| ! | TGTCTGACATATAATTAATG+AGG | + | chr7_1:62305296-62305315 | None:intergenic | 25.0% |
| ! | AGCACGCATTTATTAATAAT+TGG | - | chr7_1:62305357-62305376 | Msa1029060:intron | 25.0% |
| ! | TTTCAAAACAAGAAAATTGG+TGG | - | chr7_1:62305391-62305410 | Msa1029060:intron | 25.0% |
| ! | TATCAAGAAATGCGATAAAT+TGG | + | chr7_1:62305480-62305499 | None:intergenic | 25.0% |
| !! | AAAGAACTGTTAATTTGGAA+TGG | - | chr7_1:62305516-62305535 | Msa1029060:intron | 25.0% |
| ! | TATATGAAGGATTCTTTCTT+AGG | - | chr7_1:62305993-62306012 | Msa1029060:intron | 25.0% |
| ! | TACATACTATGACTCTATAA+GGG | - | chr7_1:62306145-62306164 | Msa1029060:intron | 25.0% |
| ! | TCTTCATTTCATTTGAGAAA+TGG | + | chr7_1:62306183-62306202 | None:intergenic | 25.0% |
| ! | ATACACACAAAACTATAGAA+TGG | - | chr7_1:62306283-62306302 | Msa1029060:intron | 25.0% |
| ! | TTAGGATTCTCTTCATTTAA+TGG | - | chr7_1:62306397-62306416 | Msa1029060:intron | 25.0% |
| ! | GTAATATAAATCTTTACCGT+GGG | + | chr7_1:62306684-62306703 | None:intergenic | 25.0% |
| ! | AGTAATATAAATCTTTACCG+TGG | + | chr7_1:62306685-62306704 | None:intergenic | 25.0% |
| ! | TTTATGACACCAAAGTATAT+AGG | - | chr7_1:62306739-62306758 | Msa1029060:intron | 25.0% |
| ! | AAATAAGCACCTATATACTT+TGG | + | chr7_1:62306751-62306770 | None:intergenic | 25.0% |
| ! | CAAAGGAAAATCTTAATTAC+TGG | - | chr7_1:62306774-62306793 | Msa1029060:intron | 25.0% |
| ! | ACACAATAAGATTTGAAAAC+AGG | + | chr7_1:62307028-62307047 | None:intergenic | 25.0% |
| !! | TATTGTGTTAGTTTATTAGG+AGG | - | chr7_1:62307040-62307059 | Msa1029060:intron | 25.0% |
| !! | ATTGTGTTAGTTTATTAGGA+GGG | - | chr7_1:62307041-62307060 | Msa1029060:intron | 25.0% |
| ! | TTTGGATTGAAGAATATCAT+TGG | - | chr7_1:62307143-62307162 | Msa1029060:intron | 25.0% |
| !! | GGTGGAATTTTAGATTTATT+GGG | + | chr7_1:62307497-62307516 | None:intergenic | 25.0% |
| !! | AGGTGGAATTTTAGATTTAT+TGG | + | chr7_1:62307498-62307517 | None:intergenic | 25.0% |
| !! | TAGAATTGTTGGTGAAAAAA+TGG | + | chr7_1:62307623-62307642 | None:intergenic | 25.0% |
| ! | CTGACTCAAAAACATAAATT+CGG | - | chr7_1:62307770-62307789 | Msa1029060:intron | 25.0% |
| ! | GTGATATATTCTGAATATCT+TGG | - | chr7_1:62307941-62307960 | Msa1029060:CDS | 25.0% |
| ! | CATTAAGCTAGTGATTTATT+TGG | + | chr7_1:62307976-62307995 | None:intergenic | 25.0% |
| ! | ACCTTATCTTTAATATAGGT+GGG | + | chr7_1:62308027-62308046 | None:intergenic | 25.0% |
| ! | TTACTAGAGTTTATAAAGAG+TGG | - | chr7_1:62308048-62308067 | Msa1029060:CDS | 25.0% |
| !! | CCATATTAGGTTTTTATACA+GGG | + | chr7_1:62308115-62308134 | None:intergenic | 25.0% |
| ! | AGTTATTGTTTCATGGTTAA+AGG | + | chr7_1:62308491-62308510 | None:intergenic | 25.0% |
| !! | CTTTTCTCAATTTGATTACT+TGG | + | chr7_1:62308581-62308600 | None:intergenic | 25.0% |
| ! | TTTGTTCCTATTCTCTTTAA+CGG | - | chr7_1:62308694-62308713 | Msa1029060:CDS | 25.0% |
| !!! | ATGTGTAGGTTTTTTTGTTA+AGG | - | chr7_1:62308829-62308848 | Msa1029060:intron | 25.0% |
| ! | GTATTCTTATGTCATTCATA+AGG | - | chr7_1:62308936-62308955 | Msa1029060:intron | 25.0% |
| ! | TTGATGCAATGTTTATTGTA+TGG | + | chr7_1:62309116-62309135 | None:intergenic | 25.0% |
| ! | CTCTATTCAATCACAAATAA+GGG | + | chr7_1:62309447-62309466 | None:intergenic | 25.0% |
| !!! | AGGAAGATTTTGTTTTGAAT+TGG | - | chr7_1:62309536-62309555 | Msa1029060:intron | 25.0% |
| ! | AGAAGTTAAAAATATGCGTA+GGG | + | chr7_1:62309612-62309631 | None:intergenic | 25.0% |
| ! | TAGAAGTTAAAAATATGCGT+AGG | + | chr7_1:62309613-62309632 | None:intergenic | 25.0% |
| ! | AGCTTAAAAAGAAACTAGAA+TGG | + | chr7_1:62309730-62309749 | None:intergenic | 25.0% |
| !!! | TCTAGTTTCTTTTTAAGCTT+AGG | - | chr7_1:62309731-62309750 | Msa1029060:five_prime_UTR | 25.0% |
| !!! | CTAGTTTCTTTTTAAGCTTA+GGG | - | chr7_1:62309732-62309751 | Msa1029060:five_prime_UTR | 25.0% |
| !!! | TAGTTTCTTTTTAAGCTTAG+GGG | - | chr7_1:62309733-62309752 | Msa1029060:five_prime_UTR | 25.0% |
| !! | CATTTTTGTAAAAGAAAGGA+TGG | + | chr7_1:62309794-62309813 | None:intergenic | 25.0% |
| !! | CATCCTTTCTTTTACAAAAA+TGG | - | chr7_1:62309792-62309811 | Msa1029060:five_prime_UTR | 25.0% |
| !!! | TTTTACAAAAATGGATTCAC+TGG | - | chr7_1:62309801-62309820 | Msa1029060:five_prime_UTR | 25.0% |
| !!! | AAGCAAGTTTTGATTGATGT+CGG | + | chr7_1:62303961-62303980 | None:intergenic | 30.0% |
| ! | TTCAGTTTGAGTTTGATTCA+TGG | - | chr7_1:62303983-62304002 | Msa1029060:three_prime_UTR | 30.0% |
| GAAGATAAAATGTGATACCT+TGG | + | chr7_1:62304162-62304181 | None:intergenic | 30.0% | |
| CATAATAGCATATGATTAGG+TGG | + | chr7_1:62304262-62304281 | None:intergenic | 30.0% | |
| GAATGTTTACCTCATTTAAC+TGG | + | chr7_1:62304300-62304319 | None:intergenic | 30.0% | |
| GATAGATATGGAGTGTAAAA+GGG | + | chr7_1:62304324-62304343 | None:intergenic | 30.0% | |
| TGATAGATATGGAGTGTAAA+AGG | + | chr7_1:62304325-62304344 | None:intergenic | 30.0% | |
| ! | AAACACTTGAGAGACTATTT+TGG | - | chr7_1:62304486-62304505 | Msa1029060:intron | 30.0% |
| ATAAGCGCTTATCATGAATA+GGG | + | chr7_1:62304673-62304692 | None:intergenic | 30.0% | |
| ACACAATTACAGTCATTGAT+TGG | - | chr7_1:62304809-62304828 | Msa1029060:intron | 30.0% | |
| ! | TCTATCAAGAGAACAGATTT+TGG | + | chr7_1:62304894-62304913 | None:intergenic | 30.0% |
| CATAGAAATGTATGTCTATG+TGG | + | chr7_1:62304933-62304952 | None:intergenic | 30.0% | |
| !! | TGATTTTGGTCTCTCTTTTT+TGG | - | chr7_1:62304954-62304973 | Msa1029060:intron | 30.0% |
| TTAATGAGGGGAAAATAAGA+AGG | + | chr7_1:62305282-62305301 | None:intergenic | 30.0% | |
| !! | AATGCGTGCTTGATAATTTT+TGG | + | chr7_1:62305347-62305366 | None:intergenic | 30.0% |
| GCTAAAACTATTATGTCCAT+TGG | - | chr7_1:62305454-62305473 | Msa1029060:intron | 30.0% | |
| ! | TAAACTGTGAAGTACTAATC+AGG | - | chr7_1:62305678-62305697 | Msa1029060:intron | 30.0% |
| !! | TTTTTGGCAGCTTTATATGA+AGG | - | chr7_1:62305980-62305999 | Msa1029060:intron | 30.0% |
| !! | GTAACTGCTGTCTAAAATTT+TGG | - | chr7_1:62306118-62306137 | Msa1029060:intron | 30.0% |
| CTACATACTATGACTCTATA+AGG | - | chr7_1:62306144-62306163 | Msa1029060:intron | 30.0% | |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | - | chr7_1:62306314-62306333 | Msa1029060:intron | 30.0% |
| !! | ATTTAATGGAAAGTGCCATT+TGG | - | chr7_1:62306411-62306430 | Msa1029060:intron | 30.0% |
| AAATGGCACTTTCCATTAAA+CGG | - | chr7_1:62306525-62306544 | Msa1029060:intron | 30.0% | |
| AAATAAAGCAAAGAGGAGTT+GGG | + | chr7_1:62306558-62306577 | None:intergenic | 30.0% | |
| TAAATAAAGCAAAGAGGAGT+TGG | + | chr7_1:62306559-62306578 | None:intergenic | 30.0% | |
| CTATATAATGTACGACATGA+TGG | - | chr7_1:62306597-62306616 | Msa1029060:intron | 30.0% | |
| ! | GTTTGTATTTTTCTTTCCCA+CGG | - | chr7_1:62306665-62306684 | Msa1029060:intron | 30.0% |
| !!! | ATAGGTGCTTATTTTTGCAA+AGG | - | chr7_1:62306757-62306776 | Msa1029060:intron | 30.0% |
| GACAGATATAATAGGTGTTA+GGG | - | chr7_1:62306851-62306870 | Msa1029060:intron | 30.0% | |
| !!! | TGGTCATTGTATTTTGATTG+TGG | - | chr7_1:62306974-62306993 | Msa1029060:intron | 30.0% |
| TTTGAAAACAGGCTTGAATT+GGG | + | chr7_1:62307017-62307036 | None:intergenic | 30.0% | |
| ATTTGAAAACAGGCTTGAAT+TGG | + | chr7_1:62307018-62307037 | None:intergenic | 30.0% | |
| AACATGTTAGGTAGACAATT+AGG | - | chr7_1:62307097-62307116 | Msa1029060:intron | 30.0% | |
| ACATGTTAGGTAGACAATTA+GGG | - | chr7_1:62307098-62307117 | Msa1029060:intron | 30.0% | |
| TATCATTGGAATGAAAGAAG+AGG | - | chr7_1:62307157-62307176 | Msa1029060:intron | 30.0% | |
| !! | TTGTTGCGAAAGTTTTGTAT+TGG | - | chr7_1:62307294-62307313 | Msa1029060:intron | 30.0% |
| !! | GAATAAAGAGAGTTCTGAAA+AGG | - | chr7_1:62307323-62307342 | Msa1029060:intron | 30.0% |
| TCCTTGGTTATTCAAACAAA+GGG | + | chr7_1:62307389-62307408 | None:intergenic | 30.0% | |
| TTCCTTGGTTATTCAAACAA+AGG | + | chr7_1:62307390-62307409 | None:intergenic | 30.0% | |
| TTCTACAAAATTCAAACGTG+AGG | - | chr7_1:62307638-62307657 | Msa1029060:intron | 30.0% | |
| TCTACAAAATTCAAACGTGA+GGG | - | chr7_1:62307639-62307658 | Msa1029060:intron | 30.0% | |
| !!! | TTTTAGTTTTTACCACACTC+TGG | - | chr7_1:62307795-62307814 | Msa1029060:CDS | 30.0% |
| CAGAAAAACAAAATAGAGCA+AGG | + | chr7_1:62307834-62307853 | None:intergenic | 30.0% | |
| GATATTCAGAATATATCACC+AGG | + | chr7_1:62307940-62307959 | None:intergenic | 30.0% | |
| AGTGATTTATTTGGATGTTC+AGG | + | chr7_1:62307967-62307986 | None:intergenic | 30.0% | |
| TCCCACCTATATTAAAGATA+AGG | - | chr7_1:62308023-62308042 | Msa1029060:CDS | 30.0% | |
| GACCTTATCTTTAATATAGG+TGG | + | chr7_1:62308028-62308047 | None:intergenic | 30.0% | |
| !! | TCTAACTCATCCTTTAAAAC+CGG | + | chr7_1:62308092-62308111 | None:intergenic | 30.0% |
| CCCTGTATAAAAACCTAATA+TGG | - | chr7_1:62308112-62308131 | Msa1029060:intron | 30.0% | |
| ! | GCCATATTAGGTTTTTATAC+AGG | + | chr7_1:62308116-62308135 | None:intergenic | 30.0% |
| GGTAAGTGTATATAAACGAT+GGG | + | chr7_1:62308163-62308182 | None:intergenic | 30.0% | |
| TGGTAAGTGTATATAAACGA+TGG | + | chr7_1:62308164-62308183 | None:intergenic | 30.0% | |
| GTCTTATCCTTAATCTATGT+GGG | + | chr7_1:62308230-62308249 | None:intergenic | 30.0% | |
| !! | TTGTTTTGTAAGGATGAGTT+AGG | - | chr7_1:62308289-62308308 | Msa1029060:intron | 30.0% |
| CCAAGCTATGTTTGTATATT+AGG | + | chr7_1:62308328-62308347 | None:intergenic | 30.0% | |
| CCTAATATACAAACATAGCT+TGG | - | chr7_1:62308325-62308344 | Msa1029060:intron | 30.0% | |
| CTCAGTAAGTTATTGTTTCA+TGG | + | chr7_1:62308498-62308517 | None:intergenic | 30.0% | |
| TGTTTCATGGTTTGATTACT+TGG | + | chr7_1:62308533-62308552 | None:intergenic | 30.0% | |
| CTCAGTAAGTTATTGTTTCA+TGG | + | chr7_1:62308498-62308517 | None:intergenic | 30.0% | |
| AAATATGGACTTCTGCATAA+AGG | + | chr7_1:62308722-62308741 | None:intergenic | 30.0% | |
| !! | AAGTTTGTTAACACATGTGT+AGG | - | chr7_1:62308815-62308834 | Msa1029060:intron | 30.0% |
| TTCTTATGTCATTCATAAGG+AGG | - | chr7_1:62308939-62308958 | Msa1029060:intron | 30.0% | |
| ACTATATTTGTGTACTATGC+AGG | - | chr7_1:62309265-62309284 | Msa1029060:intron | 30.0% | |
| GACTATAGTTGAAATAATCG+CGG | - | chr7_1:62309301-62309320 | Msa1029060:intron | 30.0% | |
| AAATCAAACCTCTAATGACA+AGG | + | chr7_1:62309407-62309426 | None:intergenic | 30.0% | |
| GCTCTATTCAATCACAAATA+AGG | + | chr7_1:62309448-62309467 | None:intergenic | 30.0% | |
| !!! | GATTTTGTTTTGAATTGGAG+TGG | - | chr7_1:62309541-62309560 | Msa1029060:intron | 30.0% |
| TACATGATTGGACTATGTTT+CGG | - | chr7_1:62309631-62309650 | Msa1029060:CDS | 30.0% | |
| ! | TTTCGGTGAACTTTTCTTTT+TGG | - | chr7_1:62309648-62309667 | Msa1029060:CDS | 30.0% |
| ! | TTACTGTTTTGTGTTCAGTG+GGG | + | chr7_1:62303918-62303937 | None:intergenic | 35.0% |
| ! | CTTACTGTTTTGTGTTCAGT+GGG | + | chr7_1:62303919-62303938 | None:intergenic | 35.0% |
| ! | ACTTACTGTTTTGTGTTCAG+TGG | + | chr7_1:62303920-62303939 | None:intergenic | 35.0% |
| ! | TGTATGTCTTTTCTCTGTGT+AGG | - | chr7_1:62304231-62304250 | Msa1029060:three_prime_UTR | 35.0% |
| ! | GTATGTCTTTTCTCTGTGTA+GGG | - | chr7_1:62304232-62304251 | Msa1029060:three_prime_UTR | 35.0% |
| GGGCATAATAGCATATGATT+AGG | + | chr7_1:62304265-62304284 | None:intergenic | 35.0% | |
| ! | TGTCTGTGTGTTGATAGATA+TGG | + | chr7_1:62304336-62304355 | None:intergenic | 35.0% |
| CTACGTGTCAATATCATGTT+CGG | + | chr7_1:62304365-62304384 | None:intergenic | 35.0% | |
| CATAAGCGCTTATCATGAAT+AGG | + | chr7_1:62304674-62304693 | None:intergenic | 35.0% | |
| ATGCCCTCTTAGATTAAATG+AGG | + | chr7_1:62304773-62304792 | None:intergenic | 35.0% | |
| !!! | AATCTAAGAGGGCATTTTAG+AGG | - | chr7_1:62304778-62304797 | Msa1029060:intron | 35.0% |
| !!! | TCTCTTTTTTGGCTTCAACA+AGG | - | chr7_1:62304965-62304984 | Msa1029060:intron | 35.0% |
| ATCATTGGAAGAACCATCAA+GGG | + | chr7_1:62304994-62305013 | None:intergenic | 35.0% | |
| !! | TCAACATCTGATTTGGCTTT+AGG | + | chr7_1:62305023-62305042 | None:intergenic | 35.0% |
| AAATGCGATAAATTGGCCAA+TGG | + | chr7_1:62305473-62305492 | None:intergenic | 35.0% | |
| ! | GAACTGTTAATTTGGAATGG+AGG | - | chr7_1:62305519-62305538 | Msa1029060:intron | 35.0% |
| !! | ATGGAGGAAGTACTTATTGT+TGG | - | chr7_1:62305535-62305554 | Msa1029060:intron | 35.0% |
| CTGCAGTAGAAAAATACACA+AGG | + | chr7_1:62305614-62305633 | None:intergenic | 35.0% | |
| ! | CTTGTGTATTTTTCTACTGC+AGG | - | chr7_1:62305612-62305631 | Msa1029060:intron | 35.0% |
| AGTACTAATCAGGAAGAAAG+AGG | - | chr7_1:62305688-62305707 | Msa1029060:intron | 35.0% | |
| ATGAAGGATTCTTTCTTAGG+TGG | - | chr7_1:62305996-62306015 | Msa1029060:intron | 35.0% | |
| TGAAGGATTCTTTCTTAGGT+GGG | - | chr7_1:62305997-62306016 | Msa1029060:intron | 35.0% | |
| TTCTTTCTCTTTGCTGAGTT+AGG | - | chr7_1:62306379-62306398 | Msa1029060:intron | 35.0% | |
| TGAGTTTATCTCTCTCCAAA+TGG | + | chr7_1:62306429-62306448 | None:intergenic | 35.0% | |
| TGAGTCTATCTTCCTCTAAA+TGG | - | chr7_1:62306508-62306527 | Msa1029060:intron | 35.0% | |
| !! | TAATGGAAAGTGCCATTTAG+AGG | + | chr7_1:62306523-62306542 | None:intergenic | 35.0% |
| TCAATATAAACATGGCGTTG+CGG | - | chr7_1:62306812-62306831 | Msa1029060:intron | 35.0% | |
| CGAAACACGACAGATATAAT+AGG | - | chr7_1:62306843-62306862 | Msa1029060:intron | 35.0% | |
| CGACAGATATAATAGGTGTT+AGG | - | chr7_1:62306850-62306869 | Msa1029060:intron | 35.0% | |
| GATCTTGTGTCAGTCATTAT+TGG | + | chr7_1:62306877-62306896 | None:intergenic | 35.0% | |
| ! | ATTTTGTCAAATTTCTGCCG+TGG | + | chr7_1:62306915-62306934 | None:intergenic | 35.0% |
| ACGGCAGAAATTTGACAAAA+TGG | - | chr7_1:62306914-62306933 | Msa1029060:intron | 35.0% | |
| TGTTCAAAAGTGGAGTAGAA+TGG | - | chr7_1:62306954-62306973 | Msa1029060:intron | 35.0% | |
| ATGACTACTAGGAACATGTT+AGG | - | chr7_1:62307085-62307104 | Msa1029060:intron | 35.0% | |
| AAACAACCGAAACTAAAGTG+AGG | - | chr7_1:62307215-62307234 | Msa1029060:intron | 35.0% | |
| AACTTTCGCAACAATGAAGA+GGG | + | chr7_1:62307288-62307307 | None:intergenic | 35.0% | |
| AAACTTTCGCAACAATGAAG+AGG | + | chr7_1:62307289-62307308 | None:intergenic | 35.0% | |
| ! | TCCCTTTGTTTGAATAACCA+AGG | - | chr7_1:62307385-62307404 | Msa1029060:intron | 35.0% |
| !!! | TGGTTCTTTCAAGTTTTCCT+TGG | + | chr7_1:62307405-62307424 | None:intergenic | 35.0% |
| ! | TTTGGGAAAGGCTTGTTTAA+TGG | + | chr7_1:62307450-62307469 | None:intergenic | 35.0% |
| TTCTTGTTGAACAAGTTCCA+AGG | + | chr7_1:62307577-62307596 | None:intergenic | 35.0% | |
| ! | TTTCAGGTCTATGAATCTGT+GGG | - | chr7_1:62307719-62307738 | Msa1029060:intron | 35.0% |
| ! | GTAGTTGGTATAAGCCTATA+AGG | - | chr7_1:62307887-62307906 | Msa1029060:CDS | 35.0% |
| ! | AAACAACAGCTAAGCCTTAT+AGG | + | chr7_1:62307904-62307923 | None:intergenic | 35.0% |
| TTCAGAATATATCACCAGGT+AGG | + | chr7_1:62307936-62307955 | None:intergenic | 35.0% | |
| TCTTTAATATAGGTGGGACT+TGG | + | chr7_1:62308021-62308040 | None:intergenic | 35.0% | |
| !! | ACCTTGAAATCCGGTTTTAA+AGG | - | chr7_1:62308079-62308098 | Msa1029060:intron | 35.0% |
| !! | TCCTTTAAAACCGGATTTCA+AGG | + | chr7_1:62308083-62308102 | None:intergenic | 35.0% |
| AAGTGTATATAAACGATGGG+TGG | + | chr7_1:62308160-62308179 | None:intergenic | 35.0% | |
| AACAAGTCCCACATAGATTA+AGG | - | chr7_1:62308220-62308239 | Msa1029060:intron | 35.0% | |
| ! | GGTCTTATCCTTAATCTATG+TGG | + | chr7_1:62308231-62308250 | None:intergenic | 35.0% |
| CACTCTTTATAACTCTAGTC+AGG | + | chr7_1:62308252-62308271 | None:intergenic | 35.0% | |
| CCTTACAAAACAAGTGTTCA+AGG | + | chr7_1:62308282-62308301 | None:intergenic | 35.0% | |
| !!! | CCTTGAACACTTGTTTTGTA+AGG | - | chr7_1:62308279-62308298 | Msa1029060:intron | 35.0% |
| CAAACATAGCTTGGAAACTT+AGG | - | chr7_1:62308334-62308353 | Msa1029060:intron | 35.0% | |
| !!! | AACTGTGGTTTTATTGTCGA+GGG | + | chr7_1:62308459-62308478 | None:intergenic | 35.0% |
| !!! | TAACTGTGGTTTTATTGTCG+AGG | + | chr7_1:62308460-62308479 | None:intergenic | 35.0% |
| !! | TAAAGGCATCACTATAACTG+TGG | + | chr7_1:62308474-62308493 | None:intergenic | 35.0% |
| AAGCTGAATGAGACACATAA+AGG | - | chr7_1:62308598-62308617 | Msa1029060:CDS | 35.0% | |
| ! | TATAGGTGGATTTATTCCTC+AGG | - | chr7_1:62308636-62308655 | Msa1029060:CDS | 35.0% |
| CAAAAAGAACAATCATCCTG+AGG | + | chr7_1:62308655-62308674 | None:intergenic | 35.0% | |
| AAGGAACCGTTAAAGAGAAT+AGG | + | chr7_1:62308703-62308722 | None:intergenic | 35.0% | |
| !!! | ACTTCACTTCACTGTTTTTG+TGG | - | chr7_1:62309073-62309092 | Msa1029060:intron | 35.0% |
| !!! | CTTCACTTCACTGTTTTTGT+GGG | - | chr7_1:62309074-62309093 | Msa1029060:intron | 35.0% |
| !!! | TTCACTGTTTTTGTGGGTTA+TGG | - | chr7_1:62309080-62309099 | Msa1029060:intron | 35.0% |
| CTTGTGAGTACTAGTCAATA+GGG | + | chr7_1:62309372-62309391 | None:intergenic | 35.0% | |
| ACTTGTGAGTACTAGTCAAT+AGG | + | chr7_1:62309373-62309392 | None:intergenic | 35.0% | |
| ACCAATATCCTTGTCATTAG+AGG | - | chr7_1:62309396-62309415 | Msa1029060:intron | 35.0% | |
| ACCTCTAATGACAAGGATAT+TGG | + | chr7_1:62309400-62309419 | None:intergenic | 35.0% | |
| TTGTGATTGAATAGAGCTGA+CGG | - | chr7_1:62309451-62309470 | Msa1029060:CDS | 35.0% | |
| GTTAAAAATATGCGTAGGGT+GGG | + | chr7_1:62309608-62309627 | None:intergenic | 35.0% | |
| AGTTAAAAATATGCGTAGGG+TGG | + | chr7_1:62309609-62309628 | None:intergenic | 35.0% | |
| TGTCGGATCGATGAAATCTA+AGG | + | chr7_1:62303944-62303963 | None:intergenic | 40.0% | |
| ! | ATGAGAAAAGCGTGCAGATT+TGG | + | chr7_1:62304081-62304100 | None:intergenic | 40.0% |
| GTGATACCTTGGTGAAAAAG+CGG | + | chr7_1:62304151-62304170 | None:intergenic | 40.0% | |
| ATCATATGCTATTATGCCCC+AGG | - | chr7_1:62304266-62304285 | Msa1029060:exon | 40.0% | |
| TCATATGCTATTATGCCCCA+GGG | - | chr7_1:62304267-62304286 | Msa1029060:CDS | 40.0% | |
| AACCATATGTGTTGCAGTGT+CGG | - | chr7_1:62304389-62304408 | Msa1029060:CDS | 40.0% | |
| !! | CATGTTCGTAAGCTGTTTTC+AGG | - | chr7_1:62304539-62304558 | Msa1029060:intron | 40.0% |
| CATCATTGGAAGAACCATCA+AGG | + | chr7_1:62304995-62305014 | None:intergenic | 40.0% | |
| !! | ACATCTGATTTGGCTTTAGG+AGG | + | chr7_1:62305020-62305039 | None:intergenic | 40.0% |
| GAAGAAGATGGTTCAACTGA+AGG | + | chr7_1:62305059-62305078 | None:intergenic | 40.0% | |
| TCAGTTGAACCATCTTCTTC+AGG | - | chr7_1:62305059-62305078 | Msa1029060:intron | 40.0% | |
| AGTTCAAGATTGAAGCAGCT+GGG | + | chr7_1:62305149-62305168 | None:intergenic | 40.0% | |
| AAGTTCAAGATTGAAGCAGC+TGG | + | chr7_1:62305150-62305169 | None:intergenic | 40.0% | |
| GAATACAACAATGCAGGTTG+AGG | + | chr7_1:62305737-62305756 | None:intergenic | 40.0% | |
| GGTTGTGAATACAACAATGC+AGG | + | chr7_1:62305743-62305762 | None:intergenic | 40.0% | |
| GTATTCACAACCTTCGCAAA+CGG | - | chr7_1:62305751-62305770 | Msa1029060:intron | 40.0% | |
| ATTTAGGTAGCTTGACAGGA+GGG | + | chr7_1:62305838-62305857 | None:intergenic | 40.0% | |
| GATGATTTAGGTAGCTTGAC+AGG | + | chr7_1:62305842-62305861 | None:intergenic | 40.0% | |
| GGAAGATCTACCTTCACAAA+CGG | + | chr7_1:62305929-62305948 | None:intergenic | 40.0% | |
| CAGCAAAGAGAAAGAAAGAG+AGG | + | chr7_1:62306375-62306394 | None:intergenic | 40.0% | |
| GCACTTTCCATTAAACGGAT+AGG | - | chr7_1:62306530-62306549 | Msa1029060:intron | 40.0% | |
| TTGGGATCCTATCCGTTTAA+TGG | + | chr7_1:62306540-62306559 | None:intergenic | 40.0% | |
| AACAGGCTTGAATTGGGAAA+TGG | + | chr7_1:62307011-62307030 | None:intergenic | 40.0% | |
| TGAGCTGCATAATGACTACT+AGG | - | chr7_1:62307074-62307093 | Msa1029060:intron | 40.0% | |
| ! | AACATCACTTGCTGAGTTGA+CGG | + | chr7_1:62307125-62307144 | None:intergenic | 40.0% |
| TCAACTCAGCAAGTGATGTT+TGG | - | chr7_1:62307125-62307144 | Msa1029060:intron | 40.0% | |
| !! | GAATGAAAGAAGAGGCATCA+AGG | - | chr7_1:62307165-62307184 | Msa1029060:intron | 40.0% |
| ! | TCTCTGCCTCACTTTAGTTT+CGG | + | chr7_1:62307224-62307243 | None:intergenic | 40.0% |
| TCACTCTAGTGCTCTTCAAA+TGG | + | chr7_1:62307425-62307444 | None:intergenic | 40.0% | |
| CCTTTCCCAAAACAAGTCTA+GGG | - | chr7_1:62307459-62307478 | Msa1029060:intron | 40.0% | |
| CTTTCCCAAAACAAGTCTAG+GGG | - | chr7_1:62307460-62307479 | Msa1029060:intron | 40.0% | |
| !! | TTCACCCCTAGACTTGTTTT+GGG | + | chr7_1:62307467-62307486 | None:intergenic | 40.0% |
| GTGCTACATATGTTGTTCTG+CGG | + | chr7_1:62307533-62307552 | None:intergenic | 40.0% | |
| AAGAATTACTGCAAGCTCTG+TGG | - | chr7_1:62307592-62307611 | Msa1029060:intron | 40.0% | |
| AGAATTACTGCAAGCTCTGT+GGG | - | chr7_1:62307593-62307612 | Msa1029060:intron | 40.0% | |
| AAAATTCAAACGTGAGGGCT+AGG | - | chr7_1:62307644-62307663 | Msa1029060:intron | 40.0% | |
| ! | CTTTCAGGTCTATGAATCTG+TGG | - | chr7_1:62307718-62307737 | Msa1029060:intron | 40.0% |
| AAAATAGAGCAAGGCATACC+AGG | + | chr7_1:62307825-62307844 | None:intergenic | 40.0% | |
| TATACCAACTACTGAGGAGA+CGG | + | chr7_1:62307879-62307898 | None:intergenic | 40.0% | |
| TAGGCTTATACCAACTACTG+AGG | + | chr7_1:62307885-62307904 | None:intergenic | 40.0% | |
| ! | AAGGCTTAGCTGTTGTTTGT+TGG | - | chr7_1:62307906-62307925 | Msa1029060:CDS | 40.0% |
| AAACCGGATTTCAAGGTGAA+GGG | + | chr7_1:62308076-62308095 | None:intergenic | 40.0% | |
| AAAACCGGATTTCAAGGTGA+AGG | + | chr7_1:62308077-62308096 | None:intergenic | 40.0% | |
| TTACCAAGTCCAATAGTGCT+GGG | - | chr7_1:62308178-62308197 | Msa1029060:intron | 40.0% | |
| !!! | ACTGTGGTTTTATTGTCGAG+GGG | + | chr7_1:62308458-62308477 | None:intergenic | 40.0% |
| CTGAATGAGACACATAAAGG+AGG | - | chr7_1:62308601-62308620 | Msa1029060:CDS | 40.0% | |
| ! | GGAGGAAAGAGAAAGCATAT+AGG | - | chr7_1:62308619-62308638 | Msa1029060:CDS | 40.0% |
| ! | GGAAAGAGAAAGCATATAGG+TGG | - | chr7_1:62308622-62308641 | Msa1029060:CDS | 40.0% |
| CTTACAGTATCAACGCTTAC+AGG | + | chr7_1:62309338-62309357 | None:intergenic | 40.0% | |
| ATCACAAATAAGGGCTGCAA+GGG | + | chr7_1:62309438-62309457 | None:intergenic | 40.0% | |
| AATCACAAATAAGGGCTGCA+AGG | + | chr7_1:62309439-62309458 | None:intergenic | 40.0% | |
| TAGACTGGATGATAATCTGC+AGG | - | chr7_1:62309484-62309503 | Msa1029060:intron | 40.0% | |
| !! | TTTTAAGCTTAGGGGAGCAT+TGG | - | chr7_1:62309741-62309760 | Msa1029060:five_prime_UTR | 40.0% |
| GAAGCTGCAACAGTAACAGT+AGG | + | chr7_1:62304044-62304063 | None:intergenic | 45.0% | |
| ! | AGAAAAGCGTGCAGATTTGG+TGG | + | chr7_1:62304078-62304097 | None:intergenic | 45.0% |
| TGGAATTAGGAGAGAGACGA+GGG | + | chr7_1:62304118-62304137 | None:intergenic | 45.0% | |
| TTGGAATTAGGAGAGAGACG+AGG | + | chr7_1:62304119-62304138 | None:intergenic | 45.0% | |
| CGGAGAGAGTTGTTGGAATT+AGG | + | chr7_1:62304131-62304150 | None:intergenic | 45.0% | |
| GAAAAAGCGGAGAGAGTTGT+TGG | + | chr7_1:62304138-62304157 | None:intergenic | 45.0% | |
| ! | GTCTTTTCTCTGTGTAGGGA+TGG | - | chr7_1:62304236-62304255 | Msa1029060:three_prime_UTR | 45.0% |
| TTTAACTGGGCCTTAACCCT+GGG | + | chr7_1:62304286-62304305 | None:intergenic | 45.0% | |
| ATTTAACTGGGCCTTAACCC+TGG | + | chr7_1:62304287-62304306 | None:intergenic | 45.0% | |
| GGTTAAGGCCCAGTTAAATG+AGG | - | chr7_1:62304288-62304307 | Msa1029060:intron | 45.0% | |
| TACCGACACTGCAACACATA+TGG | + | chr7_1:62304394-62304413 | None:intergenic | 45.0% | |
| TTCAACAAGGTTGCCCTTGA+TGG | - | chr7_1:62304978-62304997 | Msa1029060:intron | 45.0% | |
| CGGTGGTTCAACATCTGATT+TGG | + | chr7_1:62305030-62305049 | None:intergenic | 45.0% | |
| AGATGGTTCAACTGAAGGTG+CGG | + | chr7_1:62305054-62305073 | None:intergenic | 45.0% | |
| TGAACCATCTTCTTCAGGCT+TGG | - | chr7_1:62305064-62305083 | Msa1029060:intron | 45.0% | |
| ! | TGAGGAGCATATTCTGGTTG+AGG | + | chr7_1:62305719-62305738 | None:intergenic | 45.0% |
| TTTAGGTAGCTTGACAGGAG+GGG | + | chr7_1:62305837-62305856 | None:intergenic | 45.0% | |
| GATTTAGGTAGCTTGACAGG+AGG | + | chr7_1:62305839-62305858 | None:intergenic | 45.0% | |
| AGATCTACCTTCACAAACGG+AGG | + | chr7_1:62305926-62305945 | None:intergenic | 45.0% | |
| GTGGGAGACGAAGTAAAGAA+GGG | - | chr7_1:62306015-62306034 | Msa1029060:intron | 45.0% | |
| TGGGAGACGAAGTAAAGAAG+GGG | - | chr7_1:62306016-62306035 | Msa1029060:intron | 45.0% | |
| TGAACAAGTGCATCCTACAG+AGG | + | chr7_1:62306349-62306368 | None:intergenic | 45.0% | |
| ATCTGTCGTGTTTCGTCCAT+AGG | + | chr7_1:62306838-62306857 | None:intergenic | 45.0% | |
| !! | TGAAAGAAGAGGCATCAAGG+AGG | - | chr7_1:62307168-62307187 | Msa1029060:intron | 45.0% |
| !! | AAGAGGCATCAAGGAGGTTA+AGG | - | chr7_1:62307174-62307193 | Msa1029060:intron | 45.0% |
| GCCTTTCCCAAAACAAGTCT+AGG | - | chr7_1:62307458-62307477 | Msa1029060:intron | 45.0% | |
| !!! | CCCTAGACTTGTTTTGGGAA+AGG | + | chr7_1:62307462-62307481 | None:intergenic | 45.0% |
| !! | CTTCACCCCTAGACTTGTTT+TGG | + | chr7_1:62307468-62307487 | None:intergenic | 45.0% |
| ATGTTGTTCTGCGGCATCTT+CGG | + | chr7_1:62307524-62307543 | None:intergenic | 45.0% | |
| ! | GATGTGTGCTGCTCTAGTTA+AGG | + | chr7_1:62307692-62307711 | None:intergenic | 45.0% |
| GCACACATCACATGACTTTC+AGG | - | chr7_1:62307703-62307722 | Msa1029060:intron | 45.0% | |
| !!! | TTACCACACTCTGGTTTTCC+TGG | - | chr7_1:62307804-62307823 | Msa1029060:CDS | 45.0% |
| ATACCAGGAAAACCAGAGTG+TGG | + | chr7_1:62307810-62307829 | None:intergenic | 45.0% | |
| ATACCAACTACTGAGGAGAC+GGG | + | chr7_1:62307878-62307897 | None:intergenic | 45.0% | |
| !! | TGTTTGTTGGTAGTCCTACC+TGG | - | chr7_1:62307919-62307938 | Msa1029060:CDS | 45.0% |
| ! | GTAGGCTCTGATGCCATATT+AGG | + | chr7_1:62308128-62308147 | None:intergenic | 45.0% |
| CTTACCAAGTCCAATAGTGC+TGG | - | chr7_1:62308177-62308196 | Msa1029060:intron | 45.0% | |
| ACTATGCAGGCTGATAAGTC+AGG | - | chr7_1:62309278-62309297 | Msa1029060:intron | 45.0% | |
| CTATGCAGGCTGATAAGTCA+GGG | - | chr7_1:62309279-62309298 | Msa1029060:intron | 45.0% | |
| ! | GACGGAGTATTCAAGTAGAC+TGG | - | chr7_1:62309469-62309488 | Msa1029060:intron | 45.0% |
| TTGAGTAGTGTGAGGCGTAT+AGG | - | chr7_1:62309516-62309535 | Msa1029060:intron | 45.0% | |
| !!! | TTTTTATTTTTTTTTACTTT+TGG | + | chr7_1:62305214-62305233 | None:intergenic | 5.0% |
| !! | AAGAATAATATATAATTAAA+CGG | + | chr7_1:62305950-62305969 | None:intergenic | 5.0% |
| GTAACAGTAGGAGCAGCAGA+AGG | + | chr7_1:62304032-62304051 | None:intergenic | 50.0% | |
| AGAGAGACGAGGGAAAGTGA+TGG | + | chr7_1:62304108-62304127 | None:intergenic | 50.0% | |
| !!! | CTCTCTCCGCTTTTTCACCA+AGG | - | chr7_1:62304142-62304161 | Msa1029060:three_prime_UTR | 50.0% |
| GCTATTATGCCCCAGGGTTA+AGG | - | chr7_1:62304273-62304292 | Msa1029060:intron | 50.0% | |
| TTAACTGGGCCTTAACCCTG+GGG | + | chr7_1:62304285-62304304 | None:intergenic | 50.0% | |
| TGTGTCAGACATCACCTGAG+AGG | - | chr7_1:62304421-62304440 | Msa1029060:CDS | 50.0% | |
| ATTCAAACAGGACGCCTCTC+AGG | + | chr7_1:62304438-62304457 | None:intergenic | 50.0% | |
| !! | GGCTTTAGGAGGCACATCAT+TGG | + | chr7_1:62305009-62305028 | None:intergenic | 50.0% |
| TCTGCCAAGCCTGAAGAAGA+TGG | + | chr7_1:62305071-62305090 | None:intergenic | 50.0% | |
| ! | GCAGGTTGAGGAGCATATTC+TGG | + | chr7_1:62305725-62305744 | None:intergenic | 50.0% |
| ! | AGAGTATGTGATGGCGCAAC+AGG | + | chr7_1:62305782-62305801 | None:intergenic | 50.0% |
| TGTTGCGCCATCACATACTC+TGG | - | chr7_1:62305781-62305800 | Msa1029060:intron | 50.0% | |
| GGAAGAGCCAGAGTATGTGA+TGG | + | chr7_1:62305791-62305810 | None:intergenic | 50.0% | |
| TTAGGTAGCTTGACAGGAGG+GGG | + | chr7_1:62305836-62305855 | None:intergenic | 50.0% | |
| AGAGGCGGACGTGATGATTT+AGG | + | chr7_1:62305854-62305873 | None:intergenic | 50.0% | |
| CTCTTAAAAGCCCCATGGCA+GGG | - | chr7_1:62305870-62305889 | Msa1029060:intron | 50.0% | |
| ATTCTACCGAAGTCCTGCAC+CGG | - | chr7_1:62305895-62305914 | Msa1029060:intron | 50.0% | |
| TTCACAAACGGAGGTTCACC+CGG | + | chr7_1:62305917-62305936 | None:intergenic | 50.0% | |
| GGTGGGAGACGAAGTAAAGA+AGG | - | chr7_1:62306014-62306033 | Msa1029060:intron | 50.0% | |
| GAGGATTCCTACTCCTCTGT+AGG | - | chr7_1:62306333-62306352 | Msa1029060:intron | 50.0% | |
| AGTGCATCCTACAGAGGAGT+AGG | + | chr7_1:62306343-62306362 | None:intergenic | 50.0% | |
| TCCACCATGCTAAAACGCCA+CGG | - | chr7_1:62306895-62306914 | Msa1029060:intron | 50.0% | |
| CGCAACAATGAAGAGGGTCA+AGG | + | chr7_1:62307282-62307301 | None:intergenic | 50.0% | |
| CCAAGGAGAGCAAGATGTTC+TGG | + | chr7_1:62307560-62307579 | None:intergenic | 50.0% | |
| CCAGAACATCTTGCTCTCCT+TGG | - | chr7_1:62307557-62307576 | Msa1029060:intron | 50.0% | |
| TACCAACTACTGAGGAGACG+GGG | + | chr7_1:62307877-62307896 | None:intergenic | 50.0% | |
| GCACCCTTCACCTTGAAATC+CGG | - | chr7_1:62308070-62308089 | Msa1029060:CDS | 50.0% | |
| ATGCCCAGCACTATTGGACT+TGG | + | chr7_1:62308184-62308203 | None:intergenic | 50.0% | |
| ! | CAATAGTGCTGGGCATGAGA+GGG | - | chr7_1:62308188-62308207 | Msa1029060:intron | 50.0% |
| GGATGATAATCTGCAGGTCG+TGG | - | chr7_1:62309490-62309509 | Msa1029060:intron | 50.0% | |
| CGTGGTAGTTGAGTAGTGTG+AGG | - | chr7_1:62309508-62309527 | Msa1029060:intron | 50.0% | |
| AGAAGGCGAAGTGGAGGACA+AGG | + | chr7_1:62304015-62304034 | None:intergenic | 55.0% | |
| GAGACGAGGGAAAGTGATGG+AGG | + | chr7_1:62304105-62304124 | None:intergenic | 55.0% | |
| ! | GGTTCAACTGAAGGTGCGGT+CGG | + | chr7_1:62305050-62305069 | None:intergenic | 55.0% |
| ! | GTATGTGATGGCGCAACAGG+TGG | + | chr7_1:62305779-62305798 | None:intergenic | 55.0% |
| ! | GAAGTTGGCGTTGAAGGAGC+AGG | + | chr7_1:62305812-62305831 | None:intergenic | 55.0% |
| TTGACAGGAGGGGGAGAAGT+TGG | + | chr7_1:62305827-62305846 | None:intergenic | 55.0% | |
| TCCGCCTCTTAAAAGCCCCA+TGG | - | chr7_1:62305865-62305884 | Msa1029060:intron | 55.0% | |
| !! | GCCATGGGGCTTTTAAGAGG+CGG | + | chr7_1:62305869-62305888 | None:intergenic | 55.0% |
| ! | CCTGCCATGGGGCTTTTAAG+AGG | + | chr7_1:62305872-62305891 | None:intergenic | 55.0% |
| CCTCTTAAAAGCCCCATGGC+AGG | - | chr7_1:62305869-62305888 | Msa1029060:intron | 55.0% | |
| GGTAGAATGTCCCTGCCATG+GGG | + | chr7_1:62305883-62305902 | None:intergenic | 55.0% | |
| CGGTAGAATGTCCCTGCCAT+GGG | + | chr7_1:62305884-62305903 | None:intergenic | 55.0% | |
| TCGGTAGAATGTCCCTGCCA+TGG | + | chr7_1:62305885-62305904 | None:intergenic | 55.0% | |
| TTCTACCGAAGTCCTGCACC+GGG | - | chr7_1:62305896-62305915 | Msa1029060:intron | 55.0% | |
| GGGTGAACCTCCGTTTGTGA+AGG | - | chr7_1:62305916-62305935 | Msa1029060:intron | 55.0% | |
| AAACATGGCGTTGCGGCCTA+TGG | - | chr7_1:62306819-62306838 | Msa1029060:intron | 55.0% | |
| !! | TCTGCCGTGGCGTTTTAGCA+TGG | + | chr7_1:62306902-62306921 | None:intergenic | 55.0% |
| TTCTGCGGCATCTTCGGTTG+AGG | + | chr7_1:62307518-62307537 | None:intergenic | 55.0% | |
| ! | GGCATCAGAGCCTACCGATT+CGG | - | chr7_1:62308133-62308152 | Msa1029060:intron | 55.0% |
| !! | GCATCAGAGCCTACCGATTC+GGG | - | chr7_1:62308134-62308153 | Msa1029060:intron | 55.0% |
| AAACGATGGGTGGCCCGAAT+CGG | + | chr7_1:62308150-62308169 | None:intergenic | 55.0% | |
| CCTCTCATGCCCAGCACTAT+TGG | + | chr7_1:62308190-62308209 | None:intergenic | 55.0% | |
| ! | CCAATAGTGCTGGGCATGAG+AGG | - | chr7_1:62308187-62308206 | Msa1029060:intron | 55.0% |
| ! | CTGGGCATGAGAGGGTGTAT+TGG | - | chr7_1:62308196-62308215 | Msa1029060:intron | 55.0% |
| AGGCGAAGTGGAGGACAAGG+AGG | + | chr7_1:62304012-62304031 | None:intergenic | 60.0% | |
| AGCAGCAGAAGGCGAAGTGG+AGG | + | chr7_1:62304021-62304040 | None:intergenic | 60.0% | |
| AGGAGCAGCAGAAGGCGAAG+TGG | + | chr7_1:62304024-62304043 | None:intergenic | 60.0% | |
| ! | TCAACTGAAGGTGCGGTCGG+TGG | + | chr7_1:62305047-62305066 | None:intergenic | 60.0% |
| ! | GGGGGAGAAGTTGGCGTTGA+AGG | + | chr7_1:62305818-62305837 | None:intergenic | 60.0% |
| GTTCACCCGGTGCAGGACTT+CGG | + | chr7_1:62305904-62305923 | None:intergenic | 60.0% | |
| !! | GCCGTGGCGTTTTAGCATGG+TGG | + | chr7_1:62306899-62306918 | None:intergenic | 60.0% |
| TGCGGCATCTTCGGTTGAGG+TGG | + | chr7_1:62307515-62307534 | None:intergenic | 60.0% | |
| GACCCCGTCTCCTCAGTAGT+TGG | - | chr7_1:62307872-62307891 | Msa1029060:CDS | 60.0% | |
| ACAGGTGGCGCCGTTTGCGA+AGG | + | chr7_1:62305764-62305783 | None:intergenic | 65.0% | |
| AACGGAGGTTCACCCGGTGC+AGG | + | chr7_1:62305911-62305930 | None:intergenic | 65.0% | |
| GATGGGTGGCCCGAATCGGT+AGG | + | chr7_1:62308146-62308165 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62303901 | 62309830 | 62303901 | ID=Msa1029060;Name=Msa1029060 |
| chr7_1 | mRNA | 62303901 | 62309830 | 62303901 | ID=Msa1029060-mRNA-1;Parent=Msa1029060;Name=Msa1029060-mRNA-1;_AED=0.04;_eAED=0.04;_QI=101|1|1|1|1|1|7|366|277 |
| chr7_1 | exon | 62303901 | 62304287 | 62303901 | ID=Msa1029060-mRNA-1:exon:13326;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62304379 | 62304444 | 62304379 | ID=Msa1029060-mRNA-1:exon:13325;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62307645 | 62307716 | 62307645 | ID=Msa1029060-mRNA-1:exon:13324;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62307794 | 62308097 | 62307794 | ID=Msa1029060-mRNA-1:exon:13323;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62308593 | 62308744 | 62308593 | ID=Msa1029060-mRNA-1:exon:13322;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62309422 | 62309478 | 62309422 | ID=Msa1029060-mRNA-1:exon:13321;Parent=Msa1029060-mRNA-1 |
| chr7_1 | exon | 62309568 | 62309830 | 62309568 | ID=Msa1029060-mRNA-1:exon:13320;Parent=Msa1029060-mRNA-1 |
| chr7_1 | five_prime_UTR | 62309730 | 62309830 | 62309730 | ID=Msa1029060-mRNA-1:five_prime_utr;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62309568 | 62309729 | 62309568 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62309422 | 62309478 | 62309422 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62308593 | 62308744 | 62308593 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62307794 | 62308097 | 62307794 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62307645 | 62307716 | 62307645 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62304379 | 62304444 | 62304379 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | CDS | 62304267 | 62304287 | 62304267 | ID=Msa1029060-mRNA-1:cds;Parent=Msa1029060-mRNA-1 |
| chr7_1 | three_prime_UTR | 62303901 | 62304266 | 62303901 | ID=Msa1029060-mRNA-1:three_prime_utr;Parent=Msa1029060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
