AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156150 MtrunA17_Chr7g0249511 96.390 277 8 1 1 277 1 275 0.0 523
Msa1156150 MtrunA17_Chr6g0454551 55.046 218 88 5 66 276 62 276 2.49e-62 197
Msa1156150 MtrunA17_Chr7g0218731 52.423 227 88 4 66 276 63 285 8.70e-59 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156150 AT5G16390.1 47.635 296 116 8 2 277 3 279 1.93e-71 221
Msa1156150 AT5G15530.1 50.661 227 85 5 59 276 45 253 6.60e-62 196
Msa1156150 AT5G16390.2 45.896 268 106 8 2 249 3 251 3.92e-55 179

Find 88 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGAGAGTTGTTGGAATT+AGG 0.229652 7_4:-44382810 None:intergenic
TCAACATCTGATTTGGCTTT+AGG 0.237476 7_4:-44383697 None:intergenic
GCTCTATTCAATCACAAATA+AGG 0.243185 7_4:-44388073 None:intergenic
CGGTGGTTCAACATCTGATT+TGG 0.261689 7_4:-44383704 None:intergenic
CTTACAGTATCAACGCTTAC+AGG 0.270452 7_4:-44387963 None:intergenic
GAATGTTTACCTCATTTAAC+TGG 0.275310 7_4:-44382974 None:intergenic
TTCAGTTTGAGTTTGATTCA+TGG 0.304360 7_4:+44382665 Msa1156150:exon
AGAGGCGGACGTGATGATTT+AGG 0.305522 7_4:-44384528 None:intergenic
TTCAACAAGGTTGCCCTTGA+TGG 0.321266 7_4:+44383655 Msa1156150:intron
GCAGGTTGAGGAGCATATTC+TGG 0.327362 7_4:-44384399 None:intergenic
ATGAGAAAAGCGTGCAGATT+TGG 0.332822 7_4:-44382760 None:intergenic
TCAGTTGAACCATCTTCTTC+AGG 0.335118 7_4:+44383736 Msa1156150:CDS
TACATGATTGGACTATGTTT+CGG 0.364024 7_4:+44388259 Msa1156150:three_prime_UTR
TTGAGTAGTGTGAGGCGTAT+AGG 0.368588 7_4:+44388144 Msa1156150:three_prime_UTR
ATTTAACTGGGCCTTAACCC+TGG 0.377458 7_4:-44382961 None:intergenic
GCTATTATGCCCCAGGGTTA+AGG 0.391263 7_4:+44382950 Msa1156150:CDS
TAAACTGTGAAGTACTAATC+AGG 0.422789 7_4:+44384355 Msa1156150:CDS
CTCTATTCAATCACAAATAA+GGG 0.424132 7_4:-44388072 None:intergenic
AGAGTATGTGATGGCGCAAC+AGG 0.424416 7_4:-44384456 None:intergenic
GGGCATAATAGCATATGATT+AGG 0.451440 7_4:-44382939 None:intergenic
TTTAACTGGGCCTTAACCCT+GGG 0.451990 7_4:-44382960 None:intergenic
TGTCGGATCGATGAAATCTA+AGG 0.457102 7_4:-44382623 None:intergenic
GGCTTTAGGAGGCACATCAT+TGG 0.466527 7_4:-44383683 None:intergenic
GTATTCACAACCTTCGCAAA+CGG 0.468806 7_4:+44384428 Msa1156150:CDS
GAAGTTGGCGTTGAAGGAGC+AGG 0.470077 7_4:-44384486 None:intergenic
TGAACCATCTTCTTCAGGCT+TGG 0.483109 7_4:+44383741 Msa1156150:CDS
ATCATATGCTATTATGCCCC+AGG 0.484549 7_4:+44382943 Msa1156150:CDS
ACTATGCAGGCTGATAAGTC+AGG 0.498671 7_4:+44387906 Msa1156150:intron
CCTCTTAAAAGCCCCATGGC+AGG 0.499067 7_4:+44384546 Msa1156150:CDS
AACGGAGGTTCACCCGGTGC+AGG 0.503250 7_4:-44384585 None:intergenic
TCGGTAGAATGTCCCTGCCA+TGG 0.503817 7_4:-44384559 None:intergenic
TGGAATTAGGAGAGAGACGA+GGG 0.509409 7_4:-44382797 None:intergenic
GATGATTTAGGTAGCTTGAC+AGG 0.515867 7_4:-44384516 None:intergenic
CATAATAGCATATGATTAGG+TGG 0.518130 7_4:-44382936 None:intergenic
GACGGAGTATTCAAGTAGAC+TGG 0.518813 7_4:+44388097 Msa1156150:three_prime_UTR
AGAGAGACGAGGGAAAGTGA+TGG 0.519967 7_4:-44382787 None:intergenic
GAGACGAGGGAAAGTGATGG+AGG 0.521390 7_4:-44382784 None:intergenic
GTTCACCCGGTGCAGGACTT+CGG 0.523121 7_4:-44384578 None:intergenic
GGTGGGAGACGAAGTAAAGA+AGG 0.523639 7_4:+44384691 Msa1156150:intron
TGAGGAGCATATTCTGGTTG+AGG 0.524502 7_4:-44384393 None:intergenic
ACATCTGATTTGGCTTTAGG+AGG 0.528612 7_4:-44383694 None:intergenic
AGGAGCAGCAGAAGGTGAAG+TGG 0.529974 7_4:-44382703 None:intergenic
ACAGGTGGCGCCGTTTGCGA+AGG 0.536548 7_4:-44384438 None:intergenic
AGAAAAGCGTGCAGATTTGG+TGG 0.540319 7_4:-44382757 None:intergenic
CTCTTAAAAGCCCCATGGCA+GGG 0.542024 7_4:+44384547 Msa1156150:CDS
GAATACAACAATGCAGGTTG+AGG 0.544649 7_4:-44384411 None:intergenic
GAAGAAGATGGTTCAACTGA+AGG 0.548422 7_4:-44383733 None:intergenic
TTAGGTAGCTTGACAGGAGG+GGG 0.550253 7_4:-44384510 None:intergenic
AGAAGGTGAAGTGGAGGACA+AGG 0.552162 7_4:-44382694 None:intergenic
GGAAGATCTACCTTCACAAA+CGG 0.553357 7_4:-44384603 None:intergenic
GGATGATAATCTGCAGGTCG+TGG 0.562572 7_4:+44388118 Msa1156150:three_prime_UTR
AGCAGCAGAAGGTGAAGTGG+AGG 0.563171 7_4:-44382700 None:intergenic
ATTTAGGTAGCTTGACAGGA+GGG 0.566371 7_4:-44384512 None:intergenic
TAGACTGGATGATAATCTGC+AGG 0.567583 7_4:+44388112 Msa1156150:three_prime_UTR
TTCACAAACGGAGGTTCACC+CGG 0.577004 7_4:-44384591 None:intergenic
CATCATTGGAAGAACCATCA+AGG 0.577639 7_4:-44383669 None:intergenic
TGTTGCGCCATCACATACTC+TGG 0.579696 7_4:+44384458 Msa1156150:CDS
TTGTGATTGAATAGAGCTGA+CGG 0.583002 7_4:+44388079 Msa1156150:exon
TCTGCCAAGCCTGAAGAAGA+TGG 0.583819 7_4:-44383745 None:intergenic
ATTCTACCGAAGTCCTGCAC+CGG 0.585909 7_4:+44384572 Msa1156150:CDS
AGTACTAATCAGGAAGAAAG+AGG 0.587578 7_4:+44384365 Msa1156150:CDS
ATAATAGCATATGATTAGGT+GGG 0.590780 7_4:-44382935 None:intergenic
GGTTGTGAATACAACAATGC+AGG 0.591023 7_4:-44384417 None:intergenic
GTGGGAGACGAAGTAAAGAA+GGG 0.592291 7_4:+44384692 Msa1156150:CDS
TTTAGGTAGCTTGACAGGAG+GGG 0.592826 7_4:-44384511 None:intergenic
GAAGCTGCAACAGTAACAGT+AGG 0.602939 7_4:-44382723 None:intergenic
TTGGAATTAGGAGAGAGACG+AGG 0.607140 7_4:-44382798 None:intergenic
GGTTCAACTGAAGGTGCGGT+CGG 0.607776 7_4:-44383724 None:intergenic
GTATGTGATGGCGCAACAGG+TGG 0.609933 7_4:-44384453 None:intergenic
TTCTACCGAAGTCCTGCACC+GGG 0.615606 7_4:+44384573 Msa1156150:CDS
ATCATTGGAAGAACCATCAA+GGG 0.616659 7_4:-44383668 None:intergenic
AATGTTTACCTCATTTAACT+GGG 0.618081 7_4:-44382973 None:intergenic
AGGTGAAGTGGAGGACAAGG+AGG 0.619998 7_4:-44382691 None:intergenic
GGAAGAGCCAGAGTATGTGA+TGG 0.623698 7_4:-44384465 None:intergenic
CTATGCAGGCTGATAAGTCA+GGG 0.634299 7_4:+44387907 Msa1156150:intron
GGTTAAGGCCCAGTTAAATG+AGG 0.635624 7_4:+44382965 Msa1156150:CDS
GGGTGAACCTCCGTTTGTGA+AGG 0.635773 7_4:+44384593 Msa1156150:CDS
TCATATGCTATTATGCCCCA+GGG 0.636266 7_4:+44382944 Msa1156150:CDS
GACTATAGTTGAAATAATCG+CGG 0.639005 7_4:+44387929 Msa1156150:CDS
GATTTAGGTAGCTTGACAGG+AGG 0.644259 7_4:-44384513 None:intergenic
CGTGGTAGTTGAGTAGTGTG+AGG 0.652911 7_4:+44388136 Msa1156150:three_prime_UTR
TCCGCCTCTTAAAAGCCCCA+TGG 0.655613 7_4:+44384542 Msa1156150:CDS
AGATGGTTCAACTGAAGGTG+CGG 0.664821 7_4:-44383728 None:intergenic
TTAACTGGGCCTTAACCCTG+GGG 0.667597 7_4:-44382959 None:intergenic
GTAACAGTAGGAGCAGCAGA+AGG 0.674269 7_4:-44382711 None:intergenic
TGGGAGACGAAGTAAAGAAG+GGG 0.685600 7_4:+44384693 Msa1156150:CDS
GGTAGAATGTCCCTGCCATG+GGG 0.689727 7_4:-44384557 None:intergenic
AGATCTACCTTCACAAACGG+AGG 0.698623 7_4:-44384600 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATAATATTATTTTATT+TGG + chr7_4:44385131-44385150 Msa1156150:intron 0.0%
!! TAAGAAAAATAGTAATAAAT+AGG + chr7_4:44384100-44384119 Msa1156150:intron 10.0%
!! AAGAAAAATAGTAATAAATA+GGG + chr7_4:44384101-44384120 Msa1156150:intron 10.0%
!!! AAGTTTTTATGTTATTTTTA+TGG + chr7_4:44384773-44384792 Msa1156150:intron 10.0%
!!! CTTTATTTAAATGTTGAATT+TGG + chr7_4:44385247-44385266 Msa1156150:intron 15.0%
!!! TTTCTGAATATTTTGTTTTT+CGG + chr7_4:44386525-44386544 Msa1156150:intron 15.0%
!!! GTATATTAGGTTTTTATATT+GGG - chr7_4:44386993-44387012 None:intergenic 15.0%
!!! TGTATATTAGGTTTTTATAT+TGG - chr7_4:44386994-44387013 None:intergenic 15.0%
!!! TTCTTTTTGTTTTCTTTTTT+TGG + chr7_4:44387296-44387315 Msa1156150:intron 15.0%
!!! GTTTTGTTAGTATTTAAATA+AGG + chr7_4:44387388-44387407 Msa1156150:intron 15.0%
!!! TTATTATTTTAGTTCAGAAT+AGG + chr7_4:44387675-44387694 Msa1156150:intron 15.0%
!! CGAAGTATAGATATTAATTT+AGG - chr7_4:44382866-44382885 None:intergenic 20.0%
!! AACTTTCAAAACAAGAAAAT+TGG + chr7_4:44384065-44384084 Msa1156150:intron 20.0%
!! ATCTTAAAGAACTGTTAATT+TGG + chr7_4:44384188-44384207 Msa1156150:intron 20.0%
!!! ATTCTTTGTATAATGCTTTT+TGG + chr7_4:44384641-44384660 Msa1156150:intron 20.0%
!!! TCTTAATTTCTTTTGAGAAA+TGG + chr7_4:44384986-44385005 Msa1156150:intron 20.0%
!! AACATTTAAATAAAGCAAAG+AGG - chr7_4:44385242-44385261 None:intergenic 20.0%
!!! CAGTTTTATCAATATAAACA+TGG + chr7_4:44385481-44385500 Msa1156150:intron 20.0%
!! AAATAAAAGATGTTCAAAAG+TGG + chr7_4:44385621-44385640 Msa1156150:intron 20.0%
!!! TCTTATTGTGTTAGTTTATT+AGG + chr7_4:44385714-44385733 Msa1156150:intron 20.0%
!!! TAAAACATTTTTGTGTTATG+AGG - chr7_4:44386039-44386058 None:intergenic 20.0%
!!! TTTGAATTTTGTAGAATTGT+TGG - chr7_4:44386311-44386330 None:intergenic 20.0%
!! TTAATGATGATTCGATATAT+TGG + chr7_4:44386667-44386686 Msa1156150:intron 20.0%
!! TAAGACCTTATCTTTAATAT+AGG - chr7_4:44386708-44386727 None:intergenic 20.0%
!!! TTTTGTTTTCTTTTTTTGGT+AGG + chr7_4:44387300-44387319 Msa1156150:intron 20.0%
!! TGTTCACATATTATGAAATA+TGG - chr7_4:44387367-44387386 None:intergenic 20.0%
!! ATATTTCATAATATGTGAAC+AGG + chr7_4:44387366-44387385 Msa1156150:intron 20.0%
!! ATAAGAATACAACTATTAGA+AGG - chr7_4:44387554-44387573 None:intergenic 20.0%
!!! CTTAAATTTGATTTCTAACT+TGG + chr7_4:44387781-44387800 Msa1156150:intron 20.0%
!!! TGACTTTTTTATTTGCATTT+TGG - chr7_4:44387816-44387835 None:intergenic 20.0%
!! TTGATACTGTAAGTATATTT+CGG + chr7_4:44387973-44387992 Msa1156150:intron 20.0%
!!! ATTTTTAACTTCTACATGAT+TGG + chr7_4:44388247-44388266 Msa1156150:three_prime_UTR 20.0%
!!! ATTTTTGTAAAAGAAAGGAT+GGG - chr7_4:44388421-44388440 None:intergenic 20.0%
!!! AATCCATTTTTGTAAAAGAA+AGG - chr7_4:44388426-44388445 None:intergenic 20.0%
! ATAATAGCATATGATTAGGT+GGG - chr7_4:44382938-44382957 None:intergenic 25.0%
! AATGTTTACCTCATTTAACT+GGG - chr7_4:44382976-44382995 None:intergenic 25.0%
! TCAAATAAGTCAATTCAAAC+AGG - chr7_4:44383127-44383146 None:intergenic 25.0%
!! TTTATTCAAATCTGAAGTGT+CGG + chr7_4:44383393-44383412 Msa1156150:intron 25.0%
!! TTTTCCTCATTTAATCTAAG+AGG + chr7_4:44383443-44383462 Msa1156150:intron 25.0%
! TTTCCTCATTTAATCTAAGA+GGG + chr7_4:44383444-44383463 Msa1156150:intron 25.0%
!!! ATACATTTCTATGCTGATTT+TGG + chr7_4:44383617-44383636 Msa1156150:intron 25.0%
!! CAACTATTAATTTTGAACAG+AGG - chr7_4:44383863-44383882 None:intergenic 25.0%
! AGGTATAATTAATGATGCAT+TGG - chr7_4:44383939-44383958 None:intergenic 25.0%
! TCTGACATATAATTAATGAG+GGG - chr7_4:44383971-44383990 None:intergenic 25.0%
! GTCTGACATATAATTAATGA+GGG - chr7_4:44383972-44383991 None:intergenic 25.0%
! TGTCTGACATATAATTAATG+AGG - chr7_4:44383973-44383992 None:intergenic 25.0%
! AGCACGCATTTATTAATAAT+TGG + chr7_4:44384034-44384053 Msa1156150:intron 25.0%
! TTTCAAAACAAGAAAATTGG+TGG + chr7_4:44384068-44384087 Msa1156150:intron 25.0%
! TATCAAGAAATGCGATAAAT+TGG - chr7_4:44384157-44384176 None:intergenic 25.0%
!! AAAGAACTGTTAATTTGGAA+TGG + chr7_4:44384193-44384212 Msa1156150:intron 25.0%
! TATATGAAGGATTCTTTCTT+AGG + chr7_4:44384670-44384689 Msa1156150:intron 25.0%
! TACATACTATGACTCTATAA+GGG + chr7_4:44384822-44384841 Msa1156150:intron 25.0%
! TCTTCATTTCATTTGAGAAA+TGG - chr7_4:44384860-44384879 None:intergenic 25.0%
! ACATATATTACGCATTTATG+TGG - chr7_4:44384914-44384933 None:intergenic 25.0%
! ATACACACAAAACTATAGAA+TGG + chr7_4:44384960-44384979 Msa1156150:intron 25.0%
! TTAGGATTCTCTTCATTTAA+TGG + chr7_4:44385074-44385093 Msa1156150:intron 25.0%
! GTAATATAAATCTTTACCGT+GGG - chr7_4:44385361-44385380 None:intergenic 25.0%
! AGTAATATAAATCTTTACCG+TGG - chr7_4:44385362-44385381 None:intergenic 25.0%
! TTTATGACACCAAAGTATAT+AGG + chr7_4:44385416-44385435 Msa1156150:intron 25.0%
! AAATAAGCACCTATATACTT+TGG - chr7_4:44385428-44385447 None:intergenic 25.0%
! CAAAGGAAAATCTTAATTAC+TGG + chr7_4:44385451-44385470 Msa1156150:intron 25.0%
! ACACAATAAGATTTGAAAAC+AGG - chr7_4:44385705-44385724 None:intergenic 25.0%
!! TATTGTGTTAGTTTATTAGG+AGG + chr7_4:44385717-44385736 Msa1156150:intron 25.0%
!! ATTGTGTTAGTTTATTAGGA+GGG + chr7_4:44385718-44385737 Msa1156150:intron 25.0%
! TTTGGATTGAAGAATATCAT+TGG + chr7_4:44385820-44385839 Msa1156150:intron 25.0%
!! GGTGGAATTTTAGATTTATT+GGG - chr7_4:44386174-44386193 None:intergenic 25.0%
!! AGGTGGAATTTTAGATTTAT+TGG - chr7_4:44386175-44386194 None:intergenic 25.0%
!! TAGAATTGTTGGTGAAAAAA+TGG - chr7_4:44386300-44386319 None:intergenic 25.0%
! CTGACTCAAAAACATAAATT+CGG + chr7_4:44386447-44386466 Msa1156150:intron 25.0%
! GTGATATATTCTGAATATCT+TGG + chr7_4:44386618-44386637 Msa1156150:intron 25.0%
! CATTAAGCTAGTGATTTATT+TGG - chr7_4:44386653-44386672 None:intergenic 25.0%
! ACCTTATCTTTAATATAGGT+GGG - chr7_4:44386704-44386723 None:intergenic 25.0%
! TTACTAGAGTTTATAAAGAG+TGG + chr7_4:44386725-44386744 Msa1156150:intron 25.0%
!! CCATATTAGGTTTTTATACA+GGG - chr7_4:44386792-44386811 None:intergenic 25.0%
! AGTTATTGTTTCATGGTTAA+AGG - chr7_4:44387169-44387188 None:intergenic 25.0%
!! CTTTTCTCAATTTGATTACT+TGG - chr7_4:44387211-44387230 None:intergenic 25.0%
! TTTGTTCCTATTCTCTTTAA+CGG + chr7_4:44387324-44387343 Msa1156150:intron 25.0%
! TTGATGCAATGTTTATTGTA+TGG - chr7_4:44387744-44387763 None:intergenic 25.0%
! CTCTATTCAATCACAAATAA+GGG - chr7_4:44388075-44388094 None:intergenic 25.0%
!!! AGGAAGATTTTGTTTTGAAT+TGG + chr7_4:44388164-44388183 Msa1156150:three_prime_UTR 25.0%
! AGAAGTTAAAAATATGCGTA+GGG - chr7_4:44388240-44388259 None:intergenic 25.0%
! TAGAAGTTAAAAATATGCGT+AGG - chr7_4:44388241-44388260 None:intergenic 25.0%
! AGCTTAAAAAGAAACTAGAA+TGG - chr7_4:44388358-44388377 None:intergenic 25.0%
!!! TCTAGTTTCTTTTTAAGCTT+AGG + chr7_4:44388359-44388378 Msa1156150:three_prime_UTR 25.0%
!!! CTAGTTTCTTTTTAAGCTTA+GGG + chr7_4:44388360-44388379 Msa1156150:three_prime_UTR 25.0%
!!! TAGTTTCTTTTTAAGCTTAG+GGG + chr7_4:44388361-44388380 Msa1156150:three_prime_UTR 25.0%
!! CATTTTTGTAAAAGAAAGGA+TGG - chr7_4:44388422-44388441 None:intergenic 25.0%
!! CATCCTTTCTTTTACAAAAA+TGG + chr7_4:44388420-44388439 Msa1156150:three_prime_UTR 25.0%
!!! TTTTACAAAAATGGATTCAC+TGG + chr7_4:44388429-44388448 Msa1156150:three_prime_UTR 25.0%
!!! AAGCAAGTTTTGATTGATGT+CGG - chr7_4:44382643-44382662 None:intergenic 30.0%
! TTCAGTTTGAGTTTGATTCA+TGG + chr7_4:44382665-44382684 Msa1156150:exon 30.0%
GAAGATAAAATGTGATACCT+TGG - chr7_4:44382844-44382863 None:intergenic 30.0%
ATTTATGTATGTCTCTGTGT+AGG + chr7_4:44382908-44382927 Msa1156150:intron 30.0%
TTTATGTATGTCTCTGTGTA+GGG + chr7_4:44382909-44382928 Msa1156150:intron 30.0%
CATAATAGCATATGATTAGG+TGG - chr7_4:44382939-44382958 None:intergenic 30.0%
GAATGTTTACCTCATTTAAC+TGG - chr7_4:44382977-44382996 None:intergenic 30.0%
GATAGATATGGAGTGTAAAA+GGG - chr7_4:44383001-44383020 None:intergenic 30.0%
TGATAGATATGGAGTGTAAA+AGG - chr7_4:44383002-44383021 None:intergenic 30.0%
!! AACACTTTGAGAGACTATTT+TGG + chr7_4:44383164-44383183 Msa1156150:intron 30.0%
ACACAATTACAGTCATTGAT+TGG + chr7_4:44383486-44383505 Msa1156150:intron 30.0%
! TCTATCAAGAGAACAGATTT+TGG - chr7_4:44383571-44383590 None:intergenic 30.0%
CATAGAAATGTATGTCTATG+TGG - chr7_4:44383610-44383629 None:intergenic 30.0%
!! TGATTTTGGTCTCTCTTTTT+TGG + chr7_4:44383631-44383650 Msa1156150:intron 30.0%
TTAATGAGGGGAAAATAAGA+AGG - chr7_4:44383959-44383978 None:intergenic 30.0%
!! AATGCGTGCTTGATAATTTT+TGG - chr7_4:44384024-44384043 None:intergenic 30.0%
GCTAAAACTATTATGTCCAT+TGG + chr7_4:44384131-44384150 Msa1156150:intron 30.0%
! TAAACTGTGAAGTACTAATC+AGG + chr7_4:44384355-44384374 Msa1156150:CDS 30.0%
!! TTTTTGGCAGCTTTATATGA+AGG + chr7_4:44384657-44384676 Msa1156150:intron 30.0%
!! GTAACTGCTGTCTAAAATTT+TGG + chr7_4:44384795-44384814 Msa1156150:intron 30.0%
CTACATACTATGACTCTATA+AGG + chr7_4:44384821-44384840 Msa1156150:intron 30.0%
!! ATTTCTTTTGAGAAATGGAG+AGG + chr7_4:44384991-44385010 Msa1156150:intron 30.0%
!! ATTTAATGGAAAGTGCCATT+TGG + chr7_4:44385088-44385107 Msa1156150:intron 30.0%
AAATGGCACTTTCCATTAAA+CGG + chr7_4:44385202-44385221 Msa1156150:intron 30.0%
AAATAAAGCAAAGAGGAGTT+GGG - chr7_4:44385235-44385254 None:intergenic 30.0%
TAAATAAAGCAAAGAGGAGT+TGG - chr7_4:44385236-44385255 None:intergenic 30.0%
CTATATAATGTACGACATGA+TGG + chr7_4:44385274-44385293 Msa1156150:intron 30.0%
! GTTTGTATTTTTCTTTCCCA+CGG + chr7_4:44385342-44385361 Msa1156150:intron 30.0%
!!! ATAGGTGCTTATTTTTGCAA+AGG + chr7_4:44385434-44385453 Msa1156150:intron 30.0%
GACAGATATAATAGGTGTTA+GGG + chr7_4:44385528-44385547 Msa1156150:intron 30.0%
!!! TGGTCATTGTATTTTGATTG+TGG + chr7_4:44385651-44385670 Msa1156150:intron 30.0%
TTTGAAAACAGGCTTGAATT+GGG - chr7_4:44385694-44385713 None:intergenic 30.0%
ATTTGAAAACAGGCTTGAAT+TGG - chr7_4:44385695-44385714 None:intergenic 30.0%
AACATGTTAGGTAGACAATT+AGG + chr7_4:44385774-44385793 Msa1156150:intron 30.0%
ACATGTTAGGTAGACAATTA+GGG + chr7_4:44385775-44385794 Msa1156150:intron 30.0%
TATCATTGGAATGAAAGAAG+AGG + chr7_4:44385834-44385853 Msa1156150:intron 30.0%
!! TTGTTGCGAAAGTTTTGTAT+TGG + chr7_4:44385971-44385990 Msa1156150:intron 30.0%
!! GAATAAAGAGAGTTCTGAAA+AGG + chr7_4:44386000-44386019 Msa1156150:intron 30.0%
TCCTTGGTTATTCAAACAAA+GGG - chr7_4:44386066-44386085 None:intergenic 30.0%
TTCCTTGGTTATTCAAACAA+AGG - chr7_4:44386067-44386086 None:intergenic 30.0%
TTCTACAAAATTCAAACGTG+AGG + chr7_4:44386315-44386334 Msa1156150:intron 30.0%
TCTACAAAATTCAAACGTGA+GGG + chr7_4:44386316-44386335 Msa1156150:intron 30.0%
!!! TTTTAGTTTTTACCACACTC+TGG + chr7_4:44386472-44386491 Msa1156150:intron 30.0%
CAGAAAAACAAAATAGAGCA+AGG - chr7_4:44386511-44386530 None:intergenic 30.0%
GATATTCAGAATATATCACC+AGG - chr7_4:44386617-44386636 None:intergenic 30.0%
AGTGATTTATTTGGATGTTC+AGG - chr7_4:44386644-44386663 None:intergenic 30.0%
TCCCACCTATATTAAAGATA+AGG + chr7_4:44386700-44386719 Msa1156150:intron 30.0%
GACCTTATCTTTAATATAGG+TGG - chr7_4:44386705-44386724 None:intergenic 30.0%
!! TCTAACTCATCCTTTAAAAC+CGG - chr7_4:44386769-44386788 None:intergenic 30.0%
CCCTGTATAAAAACCTAATA+TGG + chr7_4:44386789-44386808 Msa1156150:intron 30.0%
! GCCATATTAGGTTTTTATAC+AGG - chr7_4:44386793-44386812 None:intergenic 30.0%
GGTAAGTGTATATAAACGAT+GGG - chr7_4:44386840-44386859 None:intergenic 30.0%
TGGTAAGTGTATATAAACGA+TGG - chr7_4:44386841-44386860 None:intergenic 30.0%
GTCTTATCCTTAATCTATGT+GGG - chr7_4:44386907-44386926 None:intergenic 30.0%
ACTCTTTATAAACTCTAGTC+AGG - chr7_4:44386929-44386948 None:intergenic 30.0%
!! TTGTTTTGTAAGGATGAGTT+AGG + chr7_4:44386967-44386986 Msa1156150:intron 30.0%
CCAAGCTATGTTTGTATATT+AGG - chr7_4:44387006-44387025 None:intergenic 30.0%
CCTAATATACAAACATAGCT+TGG + chr7_4:44387003-44387022 Msa1156150:intron 30.0%
CTCAGTAAGTTATTGTTTCA+TGG - chr7_4:44387176-44387195 None:intergenic 30.0%
AAATATGGACTTCTGCATAA+AGG - chr7_4:44387352-44387371 None:intergenic 30.0%
!!! ACGTGTAGGTTTTTTTGTTA+AGG + chr7_4:44387457-44387476 Msa1156150:intron 30.0%
ACTATATTTGTGTACTATGC+AGG + chr7_4:44387893-44387912 Msa1156150:intron 30.0%
GACTATAGTTGAAATAATCG+CGG + chr7_4:44387929-44387948 Msa1156150:CDS 30.0%
AAATCAAACCTCTAATGACA+AGG - chr7_4:44388035-44388054 None:intergenic 30.0%
GCTCTATTCAATCACAAATA+AGG - chr7_4:44388076-44388095 None:intergenic 30.0%
!!! GATTTTGTTTTGAATTGGAG+TGG + chr7_4:44388169-44388188 Msa1156150:three_prime_UTR 30.0%
TACATGATTGGACTATGTTT+CGG + chr7_4:44388259-44388278 Msa1156150:three_prime_UTR 30.0%
! TTTCGGTGAACTTTTCTTTT+TGG + chr7_4:44388276-44388295 Msa1156150:three_prime_UTR 30.0%
! TTACTGTTTTGTGTTCAGTG+GGG - chr7_4:44382600-44382619 None:intergenic 35.0%
! CTTACTGTTTTGTGTTCAGT+GGG - chr7_4:44382601-44382620 None:intergenic 35.0%
! ACTTACTGTTTTGTGTTCAG+TGG - chr7_4:44382602-44382621 None:intergenic 35.0%
GGGCATAATAGCATATGATT+AGG - chr7_4:44382942-44382961 None:intergenic 35.0%
! TGTCTGTGTGTTGATAGATA+TGG - chr7_4:44383013-44383032 None:intergenic 35.0%
CTACGTGTCAATATCATGTT+CGG - chr7_4:44383042-44383061 None:intergenic 35.0%
GTAAGCGCTTATCATGAATA+GGG - chr7_4:44383350-44383369 None:intergenic 35.0%
ATGCCCTCTTAGATTAAATG+AGG - chr7_4:44383450-44383469 None:intergenic 35.0%
!!! AATCTAAGAGGGCATTTTAG+AGG + chr7_4:44383455-44383474 Msa1156150:intron 35.0%
!!! TCTCTTTTTTGGCTTCAACA+AGG + chr7_4:44383642-44383661 Msa1156150:intron 35.0%
ATCATTGGAAGAACCATCAA+GGG - chr7_4:44383671-44383690 None:intergenic 35.0%
!! TCAACATCTGATTTGGCTTT+AGG - chr7_4:44383700-44383719 None:intergenic 35.0%
AAATGCGATAAATTGGCCAA+TGG - chr7_4:44384150-44384169 None:intergenic 35.0%
! GAACTGTTAATTTGGAATGG+AGG + chr7_4:44384196-44384215 Msa1156150:intron 35.0%
!! ATGGAGGAAGTACTTATTGT+TGG + chr7_4:44384212-44384231 Msa1156150:intron 35.0%
CTGCAGTAGAAAAATACACA+AGG - chr7_4:44384291-44384310 None:intergenic 35.0%
! CTTGTGTATTTTTCTACTGC+AGG + chr7_4:44384289-44384308 Msa1156150:intron 35.0%
AGTACTAATCAGGAAGAAAG+AGG + chr7_4:44384365-44384384 Msa1156150:CDS 35.0%
ATGAAGGATTCTTTCTTAGG+TGG + chr7_4:44384673-44384692 Msa1156150:intron 35.0%
TGAAGGATTCTTTCTTAGGT+GGG + chr7_4:44384674-44384693 Msa1156150:intron 35.0%
TTCTTTCTCTTTGCTGAGTT+AGG + chr7_4:44385056-44385075 Msa1156150:intron 35.0%
TGAGTTTATCTCTCTCCAAA+TGG - chr7_4:44385106-44385125 None:intergenic 35.0%
TGAGTCTATCTTCCTCTAAA+TGG + chr7_4:44385185-44385204 Msa1156150:intron 35.0%
!! TAATGGAAAGTGCCATTTAG+AGG - chr7_4:44385200-44385219 None:intergenic 35.0%
TCAATATAAACATGGCGTTG+CGG + chr7_4:44385489-44385508 Msa1156150:intron 35.0%
CGAAACACGACAGATATAAT+AGG + chr7_4:44385520-44385539 Msa1156150:intron 35.0%
CGACAGATATAATAGGTGTT+AGG + chr7_4:44385527-44385546 Msa1156150:intron 35.0%
GATCTTGTGTCAGTCATTAT+TGG - chr7_4:44385554-44385573 None:intergenic 35.0%
! ATTTTGTCAAATTTCTGCCG+TGG - chr7_4:44385592-44385611 None:intergenic 35.0%
ACGGCAGAAATTTGACAAAA+TGG + chr7_4:44385591-44385610 Msa1156150:intron 35.0%
TGTTCAAAAGTGGAGTAGAA+TGG + chr7_4:44385631-44385650 Msa1156150:intron 35.0%
ATGACTACTAGGAACATGTT+AGG + chr7_4:44385762-44385781 Msa1156150:intron 35.0%
AAACAACCGAAACTAAAGTG+AGG + chr7_4:44385892-44385911 Msa1156150:intron 35.0%
AACTTTCGCAACAATGAAGA+GGG - chr7_4:44385965-44385984 None:intergenic 35.0%
AAACTTTCGCAACAATGAAG+AGG - chr7_4:44385966-44385985 None:intergenic 35.0%
! TCCCTTTGTTTGAATAACCA+AGG + chr7_4:44386062-44386081 Msa1156150:intron 35.0%
!!! TGGTTCTTTCAAGTTTTCCT+TGG - chr7_4:44386082-44386101 None:intergenic 35.0%
! TTTGGGAAAGGCTTGTTTAA+TGG - chr7_4:44386127-44386146 None:intergenic 35.0%
GTGTTACATATGTTGTTCTG+CGG - chr7_4:44386210-44386229 None:intergenic 35.0%
TTCTTGTTGAACAAGTTCCA+AGG - chr7_4:44386254-44386273 None:intergenic 35.0%
! TTTCAGGTCTATGAATCTGT+GGG + chr7_4:44386396-44386415 Msa1156150:intron 35.0%
! GTAGTTGGTATAAGCCTATA+AGG + chr7_4:44386564-44386583 Msa1156150:intron 35.0%
! AAACAACAGCTAAGCCTTAT+AGG - chr7_4:44386581-44386600 None:intergenic 35.0%
TTCAGAATATATCACCAGGT+AGG - chr7_4:44386613-44386632 None:intergenic 35.0%
TCTTTAATATAGGTGGGACT+TGG - chr7_4:44386698-44386717 None:intergenic 35.0%
!! ACCTTGAAATCCGGTTTTAA+AGG + chr7_4:44386756-44386775 Msa1156150:intron 35.0%
!! TCCTTTAAAACCGGATTTCA+AGG - chr7_4:44386760-44386779 None:intergenic 35.0%
AAGTGTATATAAACGATGGG+TGG - chr7_4:44386837-44386856 None:intergenic 35.0%
AACAAGTCCCACATAGATTA+AGG + chr7_4:44386897-44386916 Msa1156150:intron 35.0%
! GGTCTTATCCTTAATCTATG+TGG - chr7_4:44386908-44386927 None:intergenic 35.0%
CCTTACAAAACAAGTGTTCA+AGG - chr7_4:44386960-44386979 None:intergenic 35.0%
!!! CCTTGAACACTTGTTTTGTA+AGG + chr7_4:44386957-44386976 Msa1156150:intron 35.0%
CAAACATAGCTTGGAAACTT+AGG + chr7_4:44387012-44387031 Msa1156150:intron 35.0%
!!! AACTGTGGTTTTATTGTCGA+GGG - chr7_4:44387137-44387156 None:intergenic 35.0%
!!! TAACTGTGGTTTTATTGTCG+AGG - chr7_4:44387138-44387157 None:intergenic 35.0%
!! TAAAGGCATCACTATAACTG+TGG - chr7_4:44387152-44387171 None:intergenic 35.0%
AAGCTGAATGAGACACATAA+AGG + chr7_4:44387228-44387247 Msa1156150:intron 35.0%
! TATAGGTGGATTTATTCCTC+AGG + chr7_4:44387266-44387285 Msa1156150:intron 35.0%
CAAAAAGAACAATCATCCTG+AGG - chr7_4:44387285-44387304 None:intergenic 35.0%
AAGGAACCGTTAAAGAGAAT+AGG - chr7_4:44387333-44387352 None:intergenic 35.0%
!! ACAAGTTTGTTAACACGTGT+AGG + chr7_4:44387443-44387462 Msa1156150:intron 35.0%
!!! ACTTCACTTCACTGTTTTTG+TGG + chr7_4:44387701-44387720 Msa1156150:intron 35.0%
!!! CTTCACTTCACTGTTTTTGT+GGG + chr7_4:44387702-44387721 Msa1156150:intron 35.0%
!!! TTCACTGTTTTTGTGGGTTA+TGG + chr7_4:44387708-44387727 Msa1156150:intron 35.0%
CTTGTGAGTACTAGTCAATA+GGG - chr7_4:44388000-44388019 None:intergenic 35.0%
ACTTGTGAGTACTAGTCAAT+AGG - chr7_4:44388001-44388020 None:intergenic 35.0%
ACCAATATCCTTGTCATTAG+AGG + chr7_4:44388024-44388043 Msa1156150:intron 35.0%
ACCTCTAATGACAAGGATAT+TGG - chr7_4:44388028-44388047 None:intergenic 35.0%
TTGTGATTGAATAGAGCTGA+CGG + chr7_4:44388079-44388098 Msa1156150:exon 35.0%
GTTAAAAATATGCGTAGGGT+GGG - chr7_4:44388236-44388255 None:intergenic 35.0%
AGTTAAAAATATGCGTAGGG+TGG - chr7_4:44388237-44388256 None:intergenic 35.0%
TGTCGGATCGATGAAATCTA+AGG - chr7_4:44382626-44382645 None:intergenic 40.0%
! ATGAGAAAAGCGTGCAGATT+TGG - chr7_4:44382763-44382782 None:intergenic 40.0%
GTGATACCTTGGTGAAAAAG+CGG - chr7_4:44382833-44382852 None:intergenic 40.0%
ATCATATGCTATTATGCCCC+AGG + chr7_4:44382943-44382962 Msa1156150:CDS 40.0%
TCATATGCTATTATGCCCCA+GGG + chr7_4:44382944-44382963 Msa1156150:CDS 40.0%
AACCATATGTGTTGCAGTGT+CGG + chr7_4:44383066-44383085 Msa1156150:intron 40.0%
!! CATGTTCGTAAGCTGTTTTC+AGG + chr7_4:44383217-44383236 Msa1156150:intron 40.0%
CGTAAGCGCTTATCATGAAT+AGG - chr7_4:44383351-44383370 None:intergenic 40.0%
CATCATTGGAAGAACCATCA+AGG - chr7_4:44383672-44383691 None:intergenic 40.0%
!! ACATCTGATTTGGCTTTAGG+AGG - chr7_4:44383697-44383716 None:intergenic 40.0%
GAAGAAGATGGTTCAACTGA+AGG - chr7_4:44383736-44383755 None:intergenic 40.0%
TCAGTTGAACCATCTTCTTC+AGG + chr7_4:44383736-44383755 Msa1156150:CDS 40.0%
AGTTCAAGATTGAAGCAGCT+GGG - chr7_4:44383826-44383845 None:intergenic 40.0%
AAGTTCAAGATTGAAGCAGC+TGG - chr7_4:44383827-44383846 None:intergenic 40.0%
GAATACAACAATGCAGGTTG+AGG - chr7_4:44384414-44384433 None:intergenic 40.0%
GGTTGTGAATACAACAATGC+AGG - chr7_4:44384420-44384439 None:intergenic 40.0%
GTATTCACAACCTTCGCAAA+CGG + chr7_4:44384428-44384447 Msa1156150:CDS 40.0%
ATTTAGGTAGCTTGACAGGA+GGG - chr7_4:44384515-44384534 None:intergenic 40.0%
GATGATTTAGGTAGCTTGAC+AGG - chr7_4:44384519-44384538 None:intergenic 40.0%
GGAAGATCTACCTTCACAAA+CGG - chr7_4:44384606-44384625 None:intergenic 40.0%
CAGCAAAGAGAAAGAAAGAG+AGG - chr7_4:44385052-44385071 None:intergenic 40.0%
GCACTTTCCATTAAACGGAT+AGG + chr7_4:44385207-44385226 Msa1156150:intron 40.0%
TTGGGATCCTATCCGTTTAA+TGG - chr7_4:44385217-44385236 None:intergenic 40.0%
AACAGGCTTGAATTGGGAAA+TGG - chr7_4:44385688-44385707 None:intergenic 40.0%
TGAGCTGCATAATGACTACT+AGG + chr7_4:44385751-44385770 Msa1156150:intron 40.0%
! AACATCACTTGCTGAGTTGA+CGG - chr7_4:44385802-44385821 None:intergenic 40.0%
TCAACTCAGCAAGTGATGTT+TGG + chr7_4:44385802-44385821 Msa1156150:intron 40.0%
!! GAATGAAAGAAGAGGCATCA+AGG + chr7_4:44385842-44385861 Msa1156150:intron 40.0%
! TCTCTGCCTCACTTTAGTTT+CGG - chr7_4:44385901-44385920 None:intergenic 40.0%
TCACTCTAGTGCTCTTCAAA+TGG - chr7_4:44386102-44386121 None:intergenic 40.0%
CCTTTCCCAAAACAAGTCTA+GGG + chr7_4:44386136-44386155 Msa1156150:intron 40.0%
CTTTCCCAAAACAAGTCTAG+GGG + chr7_4:44386137-44386156 Msa1156150:intron 40.0%
!! TTCACCCCTAGACTTGTTTT+GGG - chr7_4:44386144-44386163 None:intergenic 40.0%
AAGAATTACTGCAAGCTCTG+TGG + chr7_4:44386269-44386288 Msa1156150:intron 40.0%
AGAATTACTGCAAGCTCTGT+GGG + chr7_4:44386270-44386289 Msa1156150:intron 40.0%
AAAATTCAAACGTGAGGGCT+AGG + chr7_4:44386321-44386340 Msa1156150:intron 40.0%
! CTTTCAGGTCTATGAATCTG+TGG + chr7_4:44386395-44386414 Msa1156150:intron 40.0%
AAAATAGAGCAAGGCATACC+AGG - chr7_4:44386502-44386521 None:intergenic 40.0%
TATACCAACTACTGAGGAGA+CGG - chr7_4:44386556-44386575 None:intergenic 40.0%
TAGGCTTATACCAACTACTG+AGG - chr7_4:44386562-44386581 None:intergenic 40.0%
! AAGGCTTAGCTGTTGTTTGT+TGG + chr7_4:44386583-44386602 Msa1156150:intron 40.0%
AAACCGGATTTCAAGGTGAA+GGG - chr7_4:44386753-44386772 None:intergenic 40.0%
AAAACCGGATTTCAAGGTGA+AGG - chr7_4:44386754-44386773 None:intergenic 40.0%
TTACCAAGTCCAATAGTGCT+GGG + chr7_4:44386855-44386874 Msa1156150:intron 40.0%
!!! ACTGTGGTTTTATTGTCGAG+GGG - chr7_4:44387136-44387155 None:intergenic 40.0%
CTGAATGAGACACATAAAGG+AGG + chr7_4:44387231-44387250 Msa1156150:intron 40.0%
! GGAGGAAAGAGAAAGCATAT+AGG + chr7_4:44387249-44387268 Msa1156150:intron 40.0%
! GGAAAGAGAAAGCATATAGG+TGG + chr7_4:44387252-44387271 Msa1156150:intron 40.0%
CTTACAGTATCAACGCTTAC+AGG - chr7_4:44387966-44387985 None:intergenic 40.0%
ATCACAAATAAGGGCTGCAA+GGG - chr7_4:44388066-44388085 None:intergenic 40.0%
AATCACAAATAAGGGCTGCA+AGG - chr7_4:44388067-44388086 None:intergenic 40.0%
TAGACTGGATGATAATCTGC+AGG + chr7_4:44388112-44388131 Msa1156150:three_prime_UTR 40.0%
!! TTTTAAGCTTAGGGGAGCAT+TGG + chr7_4:44388369-44388388 Msa1156150:three_prime_UTR 40.0%
GAAGCTGCAACAGTAACAGT+AGG - chr7_4:44382726-44382745 None:intergenic 45.0%
! AGAAAAGCGTGCAGATTTGG+TGG - chr7_4:44382760-44382779 None:intergenic 45.0%
TGGAATTAGGAGAGAGACGA+GGG - chr7_4:44382800-44382819 None:intergenic 45.0%
TTGGAATTAGGAGAGAGACG+AGG - chr7_4:44382801-44382820 None:intergenic 45.0%
CGGAGAGAGTTGTTGGAATT+AGG - chr7_4:44382813-44382832 None:intergenic 45.0%
GAAAAAGCGGAGAGAGTTGT+TGG - chr7_4:44382820-44382839 None:intergenic 45.0%
TTTAACTGGGCCTTAACCCT+GGG - chr7_4:44382963-44382982 None:intergenic 45.0%
ATTTAACTGGGCCTTAACCC+TGG - chr7_4:44382964-44382983 None:intergenic 45.0%
GGTTAAGGCCCAGTTAAATG+AGG + chr7_4:44382965-44382984 Msa1156150:CDS 45.0%
TACCGACACTGCAACACATA+TGG - chr7_4:44383071-44383090 None:intergenic 45.0%
TTCAACAAGGTTGCCCTTGA+TGG + chr7_4:44383655-44383674 Msa1156150:intron 45.0%
CGGTGGTTCAACATCTGATT+TGG - chr7_4:44383707-44383726 None:intergenic 45.0%
AGATGGTTCAACTGAAGGTG+CGG - chr7_4:44383731-44383750 None:intergenic 45.0%
TGAACCATCTTCTTCAGGCT+TGG + chr7_4:44383741-44383760 Msa1156150:CDS 45.0%
! TGAGGAGCATATTCTGGTTG+AGG - chr7_4:44384396-44384415 None:intergenic 45.0%
TTTAGGTAGCTTGACAGGAG+GGG - chr7_4:44384514-44384533 None:intergenic 45.0%
GATTTAGGTAGCTTGACAGG+AGG - chr7_4:44384516-44384535 None:intergenic 45.0%
AGATCTACCTTCACAAACGG+AGG - chr7_4:44384603-44384622 None:intergenic 45.0%
GTGGGAGACGAAGTAAAGAA+GGG + chr7_4:44384692-44384711 Msa1156150:CDS 45.0%
TGGGAGACGAAGTAAAGAAG+GGG + chr7_4:44384693-44384712 Msa1156150:CDS 45.0%
TGAACAAGTGCATCCTACAG+AGG - chr7_4:44385026-44385045 None:intergenic 45.0%
ATCTGTCGTGTTTCGTCCAT+AGG - chr7_4:44385515-44385534 None:intergenic 45.0%
!! TGAAAGAAGAGGCATCAAGG+AGG + chr7_4:44385845-44385864 Msa1156150:intron 45.0%
!! AAGAGGCATCAAGGAGGTTA+AGG + chr7_4:44385851-44385870 Msa1156150:intron 45.0%
GCCTTTCCCAAAACAAGTCT+AGG + chr7_4:44386135-44386154 Msa1156150:intron 45.0%
!!! CCCTAGACTTGTTTTGGGAA+AGG - chr7_4:44386139-44386158 None:intergenic 45.0%
!! CTTCACCCCTAGACTTGTTT+TGG - chr7_4:44386145-44386164 None:intergenic 45.0%
ATGTTGTTCTGCGGCATCTT+CGG - chr7_4:44386201-44386220 None:intergenic 45.0%
! GATGTGTGCTGCTCTAGTTA+AGG - chr7_4:44386369-44386388 None:intergenic 45.0%
GCACACATCACATGACTTTC+AGG + chr7_4:44386380-44386399 Msa1156150:intron 45.0%
!!! TTACCACACTCTGGTTTTCC+TGG + chr7_4:44386481-44386500 Msa1156150:intron 45.0%
ATACCAGGAAAACCAGAGTG+TGG - chr7_4:44386487-44386506 None:intergenic 45.0%
ATACCAACTACTGAGGAGAC+GGG - chr7_4:44386555-44386574 None:intergenic 45.0%
!! TGTTTGTTGGTAGTCCTACC+TGG + chr7_4:44386596-44386615 Msa1156150:intron 45.0%
! GTAGGCTCTGATGCCATATT+AGG - chr7_4:44386805-44386824 None:intergenic 45.0%
CTTACCAAGTCCAATAGTGC+TGG + chr7_4:44386854-44386873 Msa1156150:intron 45.0%
ACTATGCAGGCTGATAAGTC+AGG + chr7_4:44387906-44387925 Msa1156150:intron 45.0%
CTATGCAGGCTGATAAGTCA+GGG + chr7_4:44387907-44387926 Msa1156150:intron 45.0%
! GACGGAGTATTCAAGTAGAC+TGG + chr7_4:44388097-44388116 Msa1156150:three_prime_UTR 45.0%
TTGAGTAGTGTGAGGCGTAT+AGG + chr7_4:44388144-44388163 Msa1156150:three_prime_UTR 45.0%
!!! TTTTTATTTTTTTTTACTTT+TGG - chr7_4:44383891-44383910 None:intergenic 5.0%
!! AAGAATAATATATAATTAAA+CGG - chr7_4:44384627-44384646 None:intergenic 5.0%
AGAAGGTGAAGTGGAGGACA+AGG - chr7_4:44382697-44382716 None:intergenic 50.0%
GTAACAGTAGGAGCAGCAGA+AGG - chr7_4:44382714-44382733 None:intergenic 50.0%
AGAGAGACGAGGGAAAGTGA+TGG - chr7_4:44382790-44382809 None:intergenic 50.0%
!!! CTCTCTCCGCTTTTTCACCA+AGG + chr7_4:44382824-44382843 Msa1156150:CDS 50.0%
GCTATTATGCCCCAGGGTTA+AGG + chr7_4:44382950-44382969 Msa1156150:CDS 50.0%
TTAACTGGGCCTTAACCCTG+GGG - chr7_4:44382962-44382981 None:intergenic 50.0%
TGTGTCAGACATCACCTGAG+AGG + chr7_4:44383098-44383117 Msa1156150:intron 50.0%
ATTCAAACAGGACGCCTCTC+AGG - chr7_4:44383115-44383134 None:intergenic 50.0%
!! GGCTTTAGGAGGCACATCAT+TGG - chr7_4:44383686-44383705 None:intergenic 50.0%
TCTGCCAAGCCTGAAGAAGA+TGG - chr7_4:44383748-44383767 None:intergenic 50.0%
! GCAGGTTGAGGAGCATATTC+TGG - chr7_4:44384402-44384421 None:intergenic 50.0%
! AGAGTATGTGATGGCGCAAC+AGG - chr7_4:44384459-44384478 None:intergenic 50.0%
TGTTGCGCCATCACATACTC+TGG + chr7_4:44384458-44384477 Msa1156150:CDS 50.0%
GGAAGAGCCAGAGTATGTGA+TGG - chr7_4:44384468-44384487 None:intergenic 50.0%
TTAGGTAGCTTGACAGGAGG+GGG - chr7_4:44384513-44384532 None:intergenic 50.0%
AGAGGCGGACGTGATGATTT+AGG - chr7_4:44384531-44384550 None:intergenic 50.0%
CTCTTAAAAGCCCCATGGCA+GGG + chr7_4:44384547-44384566 Msa1156150:CDS 50.0%
ATTCTACCGAAGTCCTGCAC+CGG + chr7_4:44384572-44384591 Msa1156150:CDS 50.0%
TTCACAAACGGAGGTTCACC+CGG - chr7_4:44384594-44384613 None:intergenic 50.0%
GGTGGGAGACGAAGTAAAGA+AGG + chr7_4:44384691-44384710 Msa1156150:intron 50.0%
GAGGATTCCTACTCCTCTGT+AGG + chr7_4:44385010-44385029 Msa1156150:intron 50.0%
AGTGCATCCTACAGAGGAGT+AGG - chr7_4:44385020-44385039 None:intergenic 50.0%
TCCACCATGCTAAAACGCCA+CGG + chr7_4:44385572-44385591 Msa1156150:intron 50.0%
CGCAACAATGAAGAGGGTCA+AGG - chr7_4:44385959-44385978 None:intergenic 50.0%
CCAAGGAGAGCAAGATGTTC+TGG - chr7_4:44386237-44386256 None:intergenic 50.0%
CCAGAACATCTTGCTCTCCT+TGG + chr7_4:44386234-44386253 Msa1156150:intron 50.0%
TACCAACTACTGAGGAGACG+GGG - chr7_4:44386554-44386573 None:intergenic 50.0%
GCACCCTTCACCTTGAAATC+CGG + chr7_4:44386747-44386766 Msa1156150:intron 50.0%
ATGCCCAGCACTATTGGACT+TGG - chr7_4:44386861-44386880 None:intergenic 50.0%
! CAATAGTGCTGGGCATGAGA+GGG + chr7_4:44386865-44386884 Msa1156150:intron 50.0%
GGATGATAATCTGCAGGTCG+TGG + chr7_4:44388118-44388137 Msa1156150:three_prime_UTR 50.0%
CGTGGTAGTTGAGTAGTGTG+AGG + chr7_4:44388136-44388155 Msa1156150:three_prime_UTR 50.0%
AGGTGAAGTGGAGGACAAGG+AGG - chr7_4:44382694-44382713 None:intergenic 55.0%
AGCAGCAGAAGGTGAAGTGG+AGG - chr7_4:44382703-44382722 None:intergenic 55.0%
AGGAGCAGCAGAAGGTGAAG+TGG - chr7_4:44382706-44382725 None:intergenic 55.0%
GAGACGAGGGAAAGTGATGG+AGG - chr7_4:44382787-44382806 None:intergenic 55.0%
! GGTTCAACTGAAGGTGCGGT+CGG - chr7_4:44383727-44383746 None:intergenic 55.0%
! GTATGTGATGGCGCAACAGG+TGG - chr7_4:44384456-44384475 None:intergenic 55.0%
! GAAGTTGGCGTTGAAGGAGC+AGG - chr7_4:44384489-44384508 None:intergenic 55.0%
TTGACAGGAGGGGGAGAAGT+TGG - chr7_4:44384504-44384523 None:intergenic 55.0%
TCCGCCTCTTAAAAGCCCCA+TGG + chr7_4:44384542-44384561 Msa1156150:CDS 55.0%
!! GCCATGGGGCTTTTAAGAGG+CGG - chr7_4:44384546-44384565 None:intergenic 55.0%
! CCTGCCATGGGGCTTTTAAG+AGG - chr7_4:44384549-44384568 None:intergenic 55.0%
CCTCTTAAAAGCCCCATGGC+AGG + chr7_4:44384546-44384565 Msa1156150:CDS 55.0%
GGTAGAATGTCCCTGCCATG+GGG - chr7_4:44384560-44384579 None:intergenic 55.0%
CGGTAGAATGTCCCTGCCAT+GGG - chr7_4:44384561-44384580 None:intergenic 55.0%
TCGGTAGAATGTCCCTGCCA+TGG - chr7_4:44384562-44384581 None:intergenic 55.0%
TTCTACCGAAGTCCTGCACC+GGG + chr7_4:44384573-44384592 Msa1156150:CDS 55.0%
GGGTGAACCTCCGTTTGTGA+AGG + chr7_4:44384593-44384612 Msa1156150:CDS 55.0%
AAACATGGCGTTGCGGCCTA+TGG + chr7_4:44385496-44385515 Msa1156150:intron 55.0%
!! TCTGCCGTGGCGTTTTAGCA+TGG - chr7_4:44385579-44385598 None:intergenic 55.0%
TTCTGCGGCATCTTCGGTTG+AGG - chr7_4:44386195-44386214 None:intergenic 55.0%
! GGCATCAGAGCCTACCGATT+CGG + chr7_4:44386810-44386829 Msa1156150:intron 55.0%
!! GCATCAGAGCCTACCGATTC+GGG + chr7_4:44386811-44386830 Msa1156150:intron 55.0%
AAACGATGGGTGGCCCGAAT+CGG - chr7_4:44386827-44386846 None:intergenic 55.0%
CCTCTCATGCCCAGCACTAT+TGG - chr7_4:44386867-44386886 None:intergenic 55.0%
! CCAATAGTGCTGGGCATGAG+AGG + chr7_4:44386864-44386883 Msa1156150:intron 55.0%
! CTGGGCATGAGAGGGTGTAT+TGG + chr7_4:44386873-44386892 Msa1156150:intron 55.0%
! TCAACTGAAGGTGCGGTCGG+TGG - chr7_4:44383724-44383743 None:intergenic 60.0%
! GGGGGAGAAGTTGGCGTTGA+AGG - chr7_4:44384495-44384514 None:intergenic 60.0%
GTTCACCCGGTGCAGGACTT+CGG - chr7_4:44384581-44384600 None:intergenic 60.0%
!! GCCGTGGCGTTTTAGCATGG+TGG - chr7_4:44385576-44385595 None:intergenic 60.0%
TGCGGCATCTTCGGTTGAGG+TGG - chr7_4:44386192-44386211 None:intergenic 60.0%
GACCCCGTCTCCTCAGTAGT+TGG + chr7_4:44386549-44386568 Msa1156150:intron 60.0%
ACAGGTGGCGCCGTTTGCGA+AGG - chr7_4:44384441-44384460 None:intergenic 65.0%
AACGGAGGTTCACCCGGTGC+AGG - chr7_4:44384588-44384607 None:intergenic 65.0%
GATGGGTGGCCCGAATCGGT+AGG - chr7_4:44386823-44386842 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 44382583 44388458 44382583 ID=Msa1156150;Name=Msa1156150
chr7_4 mRNA 44382583 44388458 44382583 ID=Msa1156150-mRNA-1;Parent=Msa1156150;Name=Msa1156150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=101|1|1|1|1|1|7|366|277
chr7_4 exon 44382583 44382845 44382583 ID=Msa1156150-mRNA-1:exon:11282;Parent=Msa1156150-mRNA-1
chr7_4 exon 44382930 44382986 44382930 ID=Msa1156150-mRNA-1:exon:11283;Parent=Msa1156150-mRNA-1
chr7_4 exon 44383664 44383815 44383664 ID=Msa1156150-mRNA-1:exon:11284;Parent=Msa1156150-mRNA-1
chr7_4 exon 44384311 44384614 44384311 ID=Msa1156150-mRNA-1:exon:11285;Parent=Msa1156150-mRNA-1
chr7_4 exon 44384692 44384763 44384692 ID=Msa1156150-mRNA-1:exon:11286;Parent=Msa1156150-mRNA-1
chr7_4 exon 44387915 44387980 44387915 ID=Msa1156150-mRNA-1:exon:11287;Parent=Msa1156150-mRNA-1
chr7_4 exon 44388072 44388458 44388072 ID=Msa1156150-mRNA-1:exon:11288;Parent=Msa1156150-mRNA-1
chr7_4 five_prime_UTR 44382583 44382683 44382583 ID=Msa1156150-mRNA-1:five_prime_utr;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44382684 44382845 44382684 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44382930 44382986 44382930 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44383664 44383815 44383664 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44384311 44384614 44384311 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44384692 44384763 44384692 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44387915 44387980 44387915 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 CDS 44388072 44388092 44388072 ID=Msa1156150-mRNA-1:cds;Parent=Msa1156150-mRNA-1
chr7_4 three_prime_UTR 44388093 44388458 44388093 ID=Msa1156150-mRNA-1:three_prime_utr;Parent=Msa1156150-mRNA-1
Gene Sequence

>Msa1156150

ATGGCTTCCTCCTTGTCCTCCACTTCACCTTCTGCTGCTCCTACTGTTACTGTTGCAGCTTCAGCTTCAGCTTCCACCAAATCTGCACGCTTTTCTCATTCCTCCATCACTTTCCCTCGTCTCTCTCCTAATTCCAACAACTCTCTCCGCTTTTTCACCAAGGGATGCCCACCTAATCATATGCTATTATGCCCCAGGGTTAAGGCCCAGTTAAATGAGGTTGCCCTTGATGGTTCTTCCAATGATGTGCCTCCTAAAGCCAAATCAGATGTTGAACCACCGACCGCACCTTCAGTTGAACCATCTTCTTCAGGCTTGGCAGATCAAGAATCAATCTCTGAACTTTTTGATCAAATTGCAAGTCTTGTCAAGCTTGTTGATTCAAGAGACATTGTAGAATTGAAGCTGAAGCAGCTAAACTGTGAAGTACTAATCAGGAAGAAAGAGGCTATGCCTCAACCAGAATATGCTCCTCAACCTGCATTGTTGTATTCACAACCTTCGCAAACGGCGCCACCTGTTGCGCCATCACATACTCTGGCTCTTCCTGCTCCTTCAACGCCAACTTCTCCCCCTCCTGTCAAGCTACCTAAATCATCACGTCCGCCTCTTAAAAGCCCCATGGCAGGGACATTCTACCGAAGTCCTGCACCGGGTGAACCTCCGTTTGTGAAGGTGGGAGACGAAGTAAAGAAGGGGCAAGTCGTGTGCATCATTGAAGCAATGAAATTGATGAATGAAATTGAAGCTGATAAGTCAGGGACTATAGTTGAAATAATCGCGGAAGATGCTAAGCCTGTAAGCGTTGATACTCCCTTATTTGTGATTGAATAG

Protein sequence

>Msa1156150

MASSLSSTSPSAAPTVTVAASASASTKSARFSHSSITFPRLSPNSNNSLRFFTKGCPPNHMLLCPRVKAQLNEVALDGSSNDVPPKAKSDVEPPTAPSVEPSSSGLADQESISELFDQIASLVKLVDSRDIVELKLKQLNCEVLIRKKEAMPQPEYAPQPALLYSQPSQTAPPVAPSHTLALPAPSTPTSPPPVKLPKSSRPPLKSPMAGTFYRSPAPGEPPFVKVGDEVKKGQVVCIIEAMKLMNEIEADKSGTIVEIIAEDAKPVSVDTPLFVIE*