Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033330 | ABD33047.1 | 83.582 | 134 | 4 | 1 | 6 | 121 | 1 | 134 | 1.41e-63 | 217 |
| Msa1033330 | ABD33047.1 | 92.958 | 142 | 10 | 0 | 276 | 417 | 173 | 314 | 3.33e-89 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033330 | sp|Q6NLB1|FB118_ARATH | 48.062 | 129 | 67 | 0 | 284 | 412 | 236 | 364 | 2.00e-35 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033330 | Q2HSX6 | 83.582 | 134 | 4 | 1 | 6 | 121 | 1 | 134 | 6.72e-64 | 217 |
| Msa1033330 | Q2HSX6 | 92.958 | 142 | 10 | 0 | 276 | 417 | 173 | 314 | 1.59e-89 | 283 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1033330 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070230 | Msa1033330 | 0.856449 | 3.193621e-62 | -8.615850e-47 |
| Msa0747180 | Msa1033330 | 0.841068 | 5.943919e-58 | -8.615850e-47 |
| Msa0160900 | Msa1033330 | 0.882085 | 1.400348e-70 | -8.615850e-47 |
| Msa0270480 | Msa1033330 | 0.803102 | 4.090999e-49 | -8.615850e-47 |
| Msa0309040 | Msa1033330 | 0.873276 | 1.666887e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033330 | MtrunA17_Chr7g0256161 | 81.875 | 160 | 11 | 1 | 276 | 417 | 173 | 332 | 7.61e-88 | 270 |
| Msa1033330 | MtrunA17_Chr7g0256161 | 83.582 | 134 | 4 | 1 | 6 | 121 | 1 | 134 | 1.44e-67 | 218 |
| Msa1033330 | MtrunA17_Chr5g0401121 | 86.207 | 116 | 13 | 1 | 142 | 254 | 23 | 138 | 1.09e-64 | 204 |
| Msa1033330 | MtrunA17_Chr3g0082121 | 65.833 | 120 | 34 | 2 | 143 | 255 | 7 | 126 | 3.15e-43 | 160 |
| Msa1033330 | MtrunA17_Chr7g0256121 | 52.239 | 134 | 63 | 1 | 279 | 412 | 255 | 387 | 4.39e-43 | 155 |
| Msa1033330 | MtrunA17_Chr5g0441461 | 48.837 | 129 | 66 | 0 | 284 | 412 | 264 | 392 | 2.90e-37 | 139 |
| Msa1033330 | MtrunA17_Chr3g0094081 | 45.600 | 125 | 68 | 0 | 288 | 412 | 244 | 368 | 9.98e-34 | 129 |
| Msa1033330 | MtrunA17_Chr7g0256131 | 49.265 | 136 | 66 | 3 | 278 | 413 | 175 | 307 | 8.11e-31 | 120 |
| Msa1033330 | MtrunA17_Chr7g0256131 | 39.695 | 131 | 56 | 3 | 9 | 121 | 8 | 133 | 6.77e-19 | 87.0 |
| Msa1033330 | MtrunA17_Chr6g0458391 | 37.195 | 164 | 75 | 6 | 97 | 253 | 164 | 306 | 1.06e-19 | 91.7 |
| Msa1033330 | MtrunA17_Chr6g0458391 | 36.364 | 110 | 63 | 3 | 146 | 252 | 65 | 170 | 1.96e-12 | 69.3 |
| Msa1033330 | MtrunA17_Chr1g0203721 | 52.632 | 76 | 33 | 1 | 181 | 253 | 69 | 144 | 1.67e-17 | 85.1 |
| Msa1033330 | MtrunA17_Chr7g0256141 | 35.556 | 135 | 78 | 3 | 279 | 413 | 182 | 307 | 4.15e-15 | 75.9 |
| Msa1033330 | MtrunA17_Chr4g0033611 | 46.753 | 77 | 37 | 2 | 175 | 248 | 76 | 151 | 7.22e-13 | 68.2 |
| Msa1033330 | MtrunA17_Chr6g0465451 | 38.346 | 133 | 74 | 5 | 284 | 413 | 186 | 313 | 1.39e-12 | 68.2 |
| Msa1033330 | MtrunA17_Chr2g0329421 | 44.156 | 77 | 39 | 2 | 175 | 248 | 27 | 102 | 6.07e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033330 | AT2G26850.1 | 48.062 | 129 | 67 | 0 | 284 | 412 | 236 | 364 | 2.04e-36 | 137 |
| Msa1033330 | AT2G32560.1 | 48.031 | 127 | 65 | 1 | 284 | 410 | 237 | 362 | 4.60e-35 | 133 |
| Msa1033330 | AT2G41170.1 | 42.963 | 135 | 76 | 1 | 282 | 416 | 235 | 368 | 1.92e-31 | 124 |
| Msa1033330 | AT2G41170.2 | 34.524 | 168 | 76 | 2 | 282 | 416 | 235 | 401 | 1.53e-25 | 107 |
| Msa1033330 | AT2G32560.2 | 44.595 | 74 | 41 | 0 | 284 | 357 | 237 | 310 | 5.22e-18 | 85.1 |
| Msa1033330 | AT3G59470.3 | 46.753 | 77 | 37 | 2 | 175 | 248 | 70 | 145 | 8.36e-12 | 65.5 |
| Msa1033330 | AT3G59470.1 | 46.753 | 77 | 37 | 2 | 175 | 248 | 70 | 145 | 8.36e-12 | 65.5 |
| Msa1033330 | AT3G59470.2 | 46.753 | 77 | 37 | 2 | 175 | 248 | 82 | 157 | 1.01e-11 | 65.5 |
Find 92 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTTCTCACCAGAATTT+TGG | 0.201635 | 7_1:-68383274 | None:intergenic |
| TTCGAGAATTCCATCTAAAA+TGG | 0.205263 | 7_1:-68378752 | None:intergenic |
| CATGCCATTGCCACTCCTTT+AGG | 0.220364 | 7_1:-68378903 | None:intergenic |
| CTCCAAAACTGATAGCTTTC+AGG | 0.225540 | 7_1:+68379514 | Msa1033330:CDS |
| TATTGCTCCTGCCAAAATTC+TGG | 0.274514 | 7_1:+68383263 | Msa1033330:CDS |
| TGCCTGAAAGCTATCAGTTT+TGG | 0.281146 | 7_1:-68379516 | None:intergenic |
| ATGCCATTGCCACTCCTTTA+GGG | 0.287945 | 7_1:-68378902 | None:intergenic |
| TCCTAATCTCATTTGACATT+TGG | 0.288109 | 7_1:-68381286 | None:intergenic |
| GAAAATTCGATCGGAAACTA+TGG | 0.294676 | 7_1:+68383463 | Msa1033330:CDS |
| GCTATGTCTTGGATCATATC+TGG | 0.347014 | 7_1:+68379023 | Msa1033330:CDS |
| TTAGGACACGCAGTGGGAAT+TGG | 0.368613 | 7_1:+68382917 | Msa1033330:intron |
| TATAGTAGGAAATGTGGTTT+TGG | 0.369598 | 7_1:+68380465 | Msa1033330:intron |
| AATTCCATCTAAAATGGATT+CGG | 0.373453 | 7_1:-68378746 | None:intergenic |
| GGTGAATGATATCGTGCAAC+AGG | 0.381657 | 7_1:+68380359 | Msa1033330:CDS |
| TTGTGGGGAATAATATCAAC+TGG | 0.390510 | 7_1:+68382944 | Msa1033330:CDS |
| AGATTAGGATCTAACACAAT+TGG | 0.392936 | 7_1:+68381300 | Msa1033330:CDS |
| GACACCGCGTCTACCCTCTT+TGG | 0.402002 | 7_1:-68380556 | None:intergenic |
| TGCTATGCAGACATAACAAT+GGG | 0.420056 | 7_1:+68383431 | Msa1033330:CDS |
| TTATTATTGTATAGAGACTT+TGG | 0.420259 | 7_1:+68383360 | Msa1033330:intron |
| TAATGTACCACACTTGGAAA+TGG | 0.424296 | 7_1:+68380401 | Msa1033330:CDS |
| GGAAACACTCAAACTCCTTA+TGG | 0.424494 | 7_1:+68383072 | Msa1033330:CDS |
| ATTCCATCTAAAATGGATTC+GGG | 0.425250 | 7_1:-68378745 | None:intergenic |
| GACCGGTGGTATGCTGTTAT+TGG | 0.429595 | 7_1:+68383209 | Msa1033330:intron |
| TACACCTTCAACCATTGGAT+TGG | 0.436578 | 7_1:-68380328 | None:intergenic |
| CATTGGTGATGTTGCCCTAA+AGG | 0.444840 | 7_1:+68378888 | Msa1033330:CDS |
| ATTGTCAAATAACTTTAAGA+TGG | 0.447951 | 7_1:+68379074 | Msa1033330:CDS |
| CAAAAGTGGGGAAGAGTCAT+TGG | 0.454981 | 7_1:+68378871 | Msa1033330:CDS |
| GGACTTTGAGTCTGAGGCCT+TGG | 0.461262 | 7_1:+68380422 | Msa1033330:CDS |
| AGTGGGAATTGGAGGATTGT+GGG | 0.462225 | 7_1:+68382928 | Msa1033330:CDS |
| TCTTGGCCTATGCTATGTCT+TGG | 0.462615 | 7_1:+68379012 | Msa1033330:CDS |
| AACAGGATGTTTAGCACGTA+TGG | 0.468473 | 7_1:+68380623 | Msa1033330:CDS |
| ATGGAAGTCTACATGAGATT+AGG | 0.477147 | 7_1:+68381261 | Msa1033330:CDS |
| TCCAAATGTCAAATGAGATT+AGG | 0.485144 | 7_1:+68381285 | Msa1033330:CDS |
| CAAATCAATAATATTCAGAA+TGG | 0.488128 | 7_1:+68378967 | Msa1033330:CDS |
| CAGTGGGAATTGGAGGATTG+TGG | 0.494172 | 7_1:+68382927 | Msa1033330:CDS |
| TTGAATTTCAATATGATCCC+CGG | 0.494249 | 7_1:-68383043 | None:intergenic |
| GGGATCATATTGAAATTCAA+TGG | 0.497444 | 7_1:+68383046 | Msa1033330:CDS |
| TGTTATCAAGATCTAAAGCC+CGG | 0.502300 | 7_1:+68383024 | Msa1033330:CDS |
| GATTAGGATCTAACACAATT+GGG | 0.506965 | 7_1:+68381301 | Msa1033330:CDS |
| GGACACGCAGTGGGAATTGG+AGG | 0.509405 | 7_1:+68382920 | Msa1033330:intron |
| AAAATTCGATCGGAAACTAT+GGG | 0.516302 | 7_1:+68383464 | Msa1033330:CDS |
| ACATCCAATCCAATGGTTGA+AGG | 0.531051 | 7_1:+68380324 | Msa1033330:CDS |
| AAATTCAGATGAAGCAAAAG+TGG | 0.535525 | 7_1:+68378857 | Msa1033330:intron |
| GCTCGAGCAGAAACTAGAAC+AGG | 0.536024 | 7_1:+68380606 | Msa1033330:CDS |
| TGATGAGTTCTATTGGTGAA+AGG | 0.537762 | 7_1:-68378777 | None:intergenic |
| ACATGAAGAGGTTTCAACTA+AGG | 0.539591 | 7_1:-68382983 | None:intergenic |
| ACGTGATTACTTAACAAAAG+AGG | 0.543276 | 7_1:+68380584 | Msa1033330:CDS |
| AATGAGTATAGTAGGAAATG+TGG | 0.549866 | 7_1:+68380459 | Msa1033330:intron |
| TGTTAGTAATGTACCACACT+TGG | 0.560348 | 7_1:+68380395 | Msa1033330:CDS |
| ACATCTATAACAGCTGAGGA+AGG | 0.565554 | 7_1:+68378928 | Msa1033330:CDS |
| GGAAATGGACTTTGAGTCTG+AGG | 0.567953 | 7_1:+68380416 | Msa1033330:CDS |
| ATTATAAAATTCATATGCCA+AGG | 0.568982 | 7_1:-68380439 | None:intergenic |
| TGAATTTCAATATGATCCCC+GGG | 0.570137 | 7_1:-68383042 | None:intergenic |
| GTTATCAAGATCTAAAGCCC+GGG | 0.570756 | 7_1:+68383025 | Msa1033330:CDS |
| AATATTCAGAATGGATCACT+TGG | 0.583761 | 7_1:+68378976 | Msa1033330:CDS |
| AATTCAGATGAAGCAAAAGT+GGG | 0.588080 | 7_1:+68378858 | Msa1033330:intron |
| AAAATTTGTGTGCTCCAAAG+AGG | 0.589431 | 7_1:+68380542 | Msa1033330:CDS |
| TTGCCCTAAAGGAGTGGCAA+TGG | 0.589949 | 7_1:+68378899 | Msa1033330:CDS |
| GAAGAGGTTTCAACTAAGGA+TGG | 0.597002 | 7_1:-68382979 | None:intergenic |
| AAACTGATAGCTTTCAGGCA+AGG | 0.599110 | 7_1:+68379519 | Msa1033330:CDS |
| CACGTGGCGAACACATGAAG+AGG | 0.602213 | 7_1:-68382995 | None:intergenic |
| CTTCTCATGCTTGACCCACG+AGG | 0.606294 | 7_1:-68383403 | None:intergenic |
| CCTTTAACAGAAGCTGACAA+TGG | 0.612454 | 7_1:+68381242 | Msa1033330:intron |
| CATATTGAAATTCAATGGAG+AGG | 0.612888 | 7_1:+68383051 | Msa1033330:CDS |
| GAATATTACATCCAATCCAA+TGG | 0.614280 | 7_1:+68380317 | Msa1033330:CDS |
| AAATTTGTGTGCTCCAAAGA+GGG | 0.614397 | 7_1:+68380543 | Msa1033330:CDS |
| GACCAATAACAGCATACCAC+CGG | 0.620745 | 7_1:-68383211 | None:intergenic |
| CATCTATAACAGCTGAGGAA+GGG | 0.621056 | 7_1:+68378929 | Msa1033330:CDS |
| GTGGGAATTGGAGGATTGTG+GGG | 0.621376 | 7_1:+68382929 | Msa1033330:CDS |
| TTTGGAGTCATAGCTAAGCA+AGG | 0.621452 | 7_1:-68379498 | None:intergenic |
| TCAGGGACTATATGTTCATG+AGG | 0.623752 | 7_1:+68379475 | Msa1033330:intron |
| GAACAAGCAGAAAATTCGAT+CGG | 0.628740 | 7_1:+68383454 | Msa1033330:CDS |
| TCAAAGTCCATTTCCAAGTG+TGG | 0.632466 | 7_1:-68380408 | None:intergenic |
| TTCTCATGCTTGACCCACGA+GGG | 0.633241 | 7_1:-68383402 | None:intergenic |
| ATGCTATGCAGACATAACAA+TGG | 0.634236 | 7_1:+68383430 | Msa1033330:CDS |
| TATGATCCAAGACATAGCAT+AGG | 0.639455 | 7_1:-68379018 | None:intergenic |
| GAGTTCAAGCAATACCCTCG+TGG | 0.644171 | 7_1:+68383388 | Msa1033330:CDS |
| AAATTCGATCGGAAACTATG+GGG | 0.646216 | 7_1:+68383465 | Msa1033330:CDS |
| TTATTGTATAGAGACTTTGG+TGG | 0.646680 | 7_1:+68383363 | Msa1033330:intron |
| AGTTCAAGCAATACCCTCGT+GGG | 0.648443 | 7_1:+68383389 | Msa1033330:CDS |
| TGTAACATCTATAACAGCTG+AGG | 0.660056 | 7_1:+68378924 | Msa1033330:CDS |
| TGCTCCAAAGAGGGTAGACG+CGG | 0.660484 | 7_1:+68380552 | Msa1033330:CDS |
| AATTCGATCGGAAACTATGG+GGG | 0.660724 | 7_1:+68383466 | Msa1033330:CDS |
| TTTCATTTAGGACACGCAGT+GGG | 0.661479 | 7_1:+68382911 | Msa1033330:intron |
| GTGAATGATATCGTGCAACA+GGG | 0.667513 | 7_1:+68380360 | Msa1033330:CDS |
| CTTGATAACAATCAGACACG+TGG | 0.688449 | 7_1:-68383011 | None:intergenic |
| TTATCAAGATCTAAAGCCCG+GGG | 0.692370 | 7_1:+68383026 | Msa1033330:CDS |
| TGTGGGGAATAATATCAACT+GGG | 0.693326 | 7_1:+68382945 | Msa1033330:CDS |
| GTGATGTTGCCCTAAAGGAG+TGG | 0.714141 | 7_1:+68378893 | Msa1033330:CDS |
| ATTCAGATGAAGCAAAAGTG+GGG | 0.721498 | 7_1:+68378859 | Msa1033330:intron |
| GTTTCATTTAGGACACGCAG+TGG | 0.723229 | 7_1:+68382910 | Msa1033330:intron |
| GCTATGCAGACATAACAATG+GGG | 0.804816 | 7_1:+68383432 | Msa1033330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTTTCTTTCA+GGG | + | chr7_1:68379458-68379477 | Msa1033330:intron | 10.0% |
| !!! | ATTTTATTTATAGATTTGAT+GGG | + | chr7_1:68379650-68379669 | Msa1033330:intron | 10.0% |
| !! | TGTTAAAAAAAATATGAATA+TGG | + | chr7_1:68381610-68381629 | Msa1033330:intron | 10.0% |
| !! | TATATGATAATATCATAATT+GGG | - | chr7_1:68382318-68382337 | Msa1033340:intron | 10.0% |
| !! | ATATATGATAATATCATAAT+TGG | - | chr7_1:68382319-68382338 | Msa1033340:intron | 10.0% |
| !!! | ATTTTTTTTAACAAAAGTTT+AGG | - | chr7_1:68383140-68383159 | None:intergenic | 10.0% |
| !!! | CATTATTATTTTTTTCTTTC+AGG | + | chr7_1:68379457-68379476 | Msa1033330:intron | 15.0% |
| !!! | GATTTTATTTATAGATTTGA+TGG | + | chr7_1:68379649-68379668 | Msa1033330:intron | 15.0% |
| !!! | AATTTTATAATGAGTATAGT+AGG | + | chr7_1:68380451-68380470 | Msa1033330:intron | 15.0% |
| !!! | CTACTTTTATCTTATAATTT+GGG | + | chr7_1:68381435-68381454 | Msa1033330:intron | 15.0% |
| !!! | TAAATGAAACACATTTTAAT+CGG | - | chr7_1:68382900-68382919 | None:intergenic | 15.0% |
| !!! | AATGTAGAAGAGATAATTTT+TGG | + | chr7_1:68378833-68378852 | Msa1033330:intron | 20.0% |
| !!! | ATGTAGAAGAGATAATTTTT+GGG | + | chr7_1:68378834-68378853 | Msa1033330:intron | 20.0% |
| !! | CAAATCAATAATATTCAGAA+TGG | + | chr7_1:68378967-68378986 | Msa1033330:CDS | 20.0% |
| !!! | ATTGTCAAATAACTTTAAGA+TGG | + | chr7_1:68379074-68379093 | Msa1033330:CDS | 20.0% |
| !! | AAGTCGATTAATTTATTCTT+TGG | + | chr7_1:68379346-68379365 | Msa1033330:intron | 20.0% |
| !! | TATTTGTTTATACTTTCAAC+AGG | + | chr7_1:68379603-68379622 | Msa1033330:intron | 20.0% |
| !!! | CATGAATATTTGAAAGTATT+TGG | + | chr7_1:68380210-68380229 | Msa1033330:intron | 20.0% |
| !! | TATTCACATTATCTAGAAAA+TGG | - | chr7_1:68380302-68380321 | None:intergenic | 20.0% |
| !! | ATTATAAAATTCATATGCCA+AGG | - | chr7_1:68380442-68380461 | None:intergenic | 20.0% |
| !!! | ACATTACTACTTTTTCTATT+AGG | + | chr7_1:68381342-68381361 | Msa1033330:intron | 20.0% |
| !!! | CATTACTACTTTTTCTATTA+GGG | + | chr7_1:68381343-68381362 | Msa1033330:intron | 20.0% |
| !!! | ATTACTACTTTTTCTATTAG+GGG | + | chr7_1:68381344-68381363 | Msa1033330:intron | 20.0% |
| !!! | TCTGATATACTAGTTTATTT+TGG | + | chr7_1:68381412-68381431 | Msa1033330:intron | 20.0% |
| !!! | GCTACTTTTATCTTATAATT+TGG | + | chr7_1:68381434-68381453 | Msa1033330:intron | 20.0% |
| !! | TATTTCACATTATAGCAAAA+TGG | - | chr7_1:68381505-68381524 | Msa1033340:CDS | 20.0% |
| !!! | TAATTTTATTGACAACGAAT+GGG | + | chr7_1:68381697-68381716 | Msa1033330:intron | 20.0% |
| !!! | TCATATGTGTTTTAGATTTT+GGG | - | chr7_1:68382139-68382158 | Msa1033340:intron | 20.0% |
| !! | AATACAATTCAATACAATGT+TGG | + | chr7_1:68382160-68382179 | Msa1033330:intron | 20.0% |
| !! | ATACAATTCAATACAATGTT+GGG | + | chr7_1:68382161-68382180 | Msa1033330:intron | 20.0% |
| !!! | CACTTTGTATTTTATTTTAC+TGG | - | chr7_1:68382425-68382444 | Msa1033340:intron | 20.0% |
| !! | AATTGTTCATATCAATTTAG+AGG | - | chr7_1:68382452-68382471 | Msa1033340:intron | 20.0% |
| !!! | AAATGAAACACATTTTAATC+GGG | - | chr7_1:68382899-68382918 | None:intergenic | 20.0% |
| !! | GATTAAAATGTGTTTCATTT+AGG | + | chr7_1:68382899-68382918 | Msa1033330:intron | 20.0% |
| !! | TTATTATTGTATAGAGACTT+TGG | + | chr7_1:68383360-68383379 | Msa1033330:intron | 20.0% |
| !! | AATTCCATCTAAAATGGATT+CGG | - | chr7_1:68378749-68378768 | None:intergenic | 25.0% |
| !! | AAACTATGACTCTTTAAAGA+TGG | - | chr7_1:68379387-68379406 | None:intergenic | 25.0% |
| ! | GATCTCAATTTCTTAAGAAA+TGG | - | chr7_1:68379725-68379744 | None:intergenic | 25.0% |
| ! | AGAAGAGAATATGAAGAAAA+CGG | + | chr7_1:68379852-68379871 | Msa1033330:intron | 25.0% |
| ! | GACAAAGAACAAAATCTTAT+CGG | - | chr7_1:68380169-68380188 | None:intergenic | 25.0% |
| !!! | TTTTATTTGCATATTCTCGA+CGG | - | chr7_1:68380494-68380513 | None:intergenic | 25.0% |
| ! | GCAAATAAAAGCAAAAAAGA+TGG | + | chr7_1:68380504-68380523 | Msa1033330:CDS | 25.0% |
| ! | GAAGATTGGAAATGAAAAAA+AGG | + | chr7_1:68380662-68380681 | Msa1033330:intron | 25.0% |
| ! | TGGATAAAAAGAGACAAAAA+AGG | + | chr7_1:68380787-68380806 | Msa1033330:intron | 25.0% |
| !!! | TGTTACTTTTACTACTATGT+AGG | + | chr7_1:68380882-68380901 | Msa1033330:intron | 25.0% |
| ! | AAGGAAGAGAAAGAAAAAAT+TGG | + | chr7_1:68380948-68380967 | Msa1033330:intron | 25.0% |
| ! | CACATGTTAAAAAGAAAGTA+TGG | - | chr7_1:68380983-68381002 | None:intergenic | 25.0% |
| !! | TGTTACTTCTACTATTATGT+AGG | + | chr7_1:68381109-68381128 | Msa1033330:intron | 25.0% |
| ! | TGATCAACAAAATGCAATAT+AGG | - | chr7_1:68381371-68381390 | None:intergenic | 25.0% |
| !!! | CATTTTGTTGATCACTTTTT+GGG | + | chr7_1:68381377-68381396 | Msa1033330:intron | 25.0% |
| ! | GCTATAATGTGAAATAGAAA+AGG | + | chr7_1:68381509-68381528 | Msa1033330:intron | 25.0% |
| ! | AGCATATCAAATGTAATGTT+TGG | - | chr7_1:68381678-68381697 | Msa1033340:intron | 25.0% |
| !! | CTAATTTTATTGACAACGAA+TGG | + | chr7_1:68381696-68381715 | Msa1033330:intron | 25.0% |
| ! | AAACAAACCAATACAAACAA+GGG | + | chr7_1:68381757-68381776 | Msa1033330:intron | 25.0% |
| !!! | TTATTTTGGTAGTCTCTTTA+GGG | - | chr7_1:68381830-68381849 | Msa1033340:intron | 25.0% |
| !!! | TTTATTTTGGTAGTCTCTTT+AGG | - | chr7_1:68381831-68381850 | Msa1033340:intron | 25.0% |
| !!! | CATATGTGTTTTAGATTTTG+GGG | - | chr7_1:68382138-68382157 | Msa1033340:intron | 25.0% |
| !!! | GTCATATGTGTTTTAGATTT+TGG | - | chr7_1:68382140-68382159 | Msa1033340:intron | 25.0% |
| ! | TGATAATATCATAATTGGGA+GGG | - | chr7_1:68382314-68382333 | Msa1033340:intron | 25.0% |
| ! | ATGATAATATCATAATTGGG+AGG | - | chr7_1:68382315-68382334 | Msa1033340:intron | 25.0% |
| ! | GAAAAAAAAGTCAGAAAACA+TGG | - | chr7_1:68382774-68382793 | None:intergenic | 25.0% |
| ! | TTGAAGATCTCAATTTCTTA+AGG | + | chr7_1:68382855-68382874 | Msa1033330:intron | 25.0% |
| ! | ATCTCAATTTCTTAAGGAAA+TGG | + | chr7_1:68382861-68382880 | Msa1033330:intron | 25.0% |
| !! | CATTTTCATTACAAGAATCT+AGG | - | chr7_1:68383238-68383257 | None:intergenic | 25.0% |
| !! | AAAATTTCTCACCAGAATTT+TGG | - | chr7_1:68383277-68383296 | None:intergenic | 25.0% |
| ! | ATGAAGAAGAGATTGAAAAA+TGG | + | chr7_1:68383506-68383525 | Msa1033330:CDS | 25.0% |
| ! | ATTCCATCTAAAATGGATTC+GGG | - | chr7_1:68378748-68378767 | None:intergenic | 30.0% |
| TTCGAGAATTCCATCTAAAA+TGG | - | chr7_1:68378755-68378774 | None:intergenic | 30.0% | |
| !! | GACATTTTGATGAGTTCTAT+TGG | - | chr7_1:68378787-68378806 | None:intergenic | 30.0% |
| AAATTCAGATGAAGCAAAAG+TGG | + | chr7_1:68378857-68378876 | Msa1033330:intron | 30.0% | |
| AATTCAGATGAAGCAAAAGT+GGG | + | chr7_1:68378858-68378877 | Msa1033330:intron | 30.0% | |
| AATATTCAGAATGGATCACT+TGG | + | chr7_1:68378976-68378995 | Msa1033330:CDS | 30.0% | |
| GTTTCCAGCTCAATTATTTA+GGG | + | chr7_1:68379131-68379150 | Msa1033330:intron | 30.0% | |
| TTTACCCTAAATAATTGAGC+TGG | - | chr7_1:68379138-68379157 | None:intergenic | 30.0% | |
| GGTTTAGCAATTTGATTACA+TGG | + | chr7_1:68379671-68379690 | Msa1033330:intron | 30.0% | |
| TTAGCAATTTGATTACATGG+AGG | + | chr7_1:68379674-68379693 | Msa1033330:intron | 30.0% | |
| TTACATGGAGGTGATTAAAA+TGG | + | chr7_1:68379686-68379705 | Msa1033330:intron | 30.0% | |
| TACATGGAGGTGATTAAAAT+GGG | + | chr7_1:68379687-68379706 | Msa1033330:intron | 30.0% | |
| CAATTTCTTAAGAAATGGAG+AGG | - | chr7_1:68379720-68379739 | None:intergenic | 30.0% | |
| TTAAAATGAATCTCAGCCAT+TGG | - | chr7_1:68379793-68379812 | None:intergenic | 30.0% | |
| AAAGTGAAACCAAATGATGA+TGG | - | chr7_1:68379974-68379993 | None:intergenic | 30.0% | |
| GAATATTACATCCAATCCAA+TGG | + | chr7_1:68380317-68380336 | Msa1033330:CDS | 30.0% | |
| AATGAGTATAGTAGGAAATG+TGG | + | chr7_1:68380459-68380478 | Msa1033330:intron | 30.0% | |
| ! | TATAGTAGGAAATGTGGTTT+TGG | + | chr7_1:68380465-68380484 | Msa1033330:intron | 30.0% |
| ACGTGATTACTTAACAAAAG+AGG | + | chr7_1:68380584-68380603 | Msa1033330:CDS | 30.0% | |
| ! | GTATGGTTATTTCACTTGAT+CGG | + | chr7_1:68380640-68380659 | Msa1033330:intron | 30.0% |
| TGAAAAAAAGGATCAGAATG+TGG | + | chr7_1:68380674-68380693 | Msa1033330:intron | 30.0% | |
| GCTTAGATAGGACTAAAAAA+AGG | + | chr7_1:68380742-68380761 | Msa1033330:intron | 30.0% | |
| GGCTAAGAGAAAGAAAAAAT+TGG | + | chr7_1:68380818-68380837 | Msa1033330:intron | 30.0% | |
| TCCAAATGTCAAATGAGATT+AGG | + | chr7_1:68381285-68381304 | Msa1033330:CDS | 30.0% | |
| TCCTAATCTCATTTGACATT+TGG | - | chr7_1:68381289-68381308 | None:intergenic | 30.0% | |
| AGATTAGGATCTAACACAAT+TGG | + | chr7_1:68381300-68381319 | Msa1033330:CDS | 30.0% | |
| GATTAGGATCTAACACAATT+GGG | + | chr7_1:68381301-68381320 | Msa1033330:CDS | 30.0% | |
| !! | GCATTTTGTTGATCACTTTT+TGG | + | chr7_1:68381376-68381395 | Msa1033330:intron | 30.0% |
| AGCAAAATGGTACATATAGA+TGG | - | chr7_1:68381492-68381511 | Msa1033340:CDS | 30.0% | |
| AAAAAGTCCTGCTATAGAAA+AGG | + | chr7_1:68381570-68381589 | Msa1033330:intron | 30.0% | |
| ! | TGGATTTTCGTGTAATGAAT+TGG | - | chr7_1:68381658-68381677 | Msa1033340:intron | 30.0% |
| GAAACAAACCAATACAAACA+AGG | + | chr7_1:68381756-68381775 | Msa1033330:intron | 30.0% | |
| !!! | GTTGTTATTTTTCTGTCTTG+CGG | - | chr7_1:68382244-68382263 | Msa1033340:intron | 30.0% |
| TAAGCAATGATGAAGTTCAA+GGG | - | chr7_1:68382274-68382293 | Msa1033340:intron | 30.0% | |
| ATAAGCAATGATGAAGTTCA+AGG | - | chr7_1:68382275-68382294 | Msa1033340:intron | 30.0% | |
| TTGAACTTCATCATTGCTTA+TGG | + | chr7_1:68382274-68382293 | Msa1033330:intron | 30.0% | |
| TCATAATTTGAGCAAGACTT+TGG | - | chr7_1:68382367-68382386 | Msa1033340:CDS | 30.0% | |
| ACAATTGAACATGTATGCAA+AGG | + | chr7_1:68382466-68382485 | Msa1033330:intron | 30.0% | |
| ATTGAAGAATTAGAATGCCA+AGG | + | chr7_1:68382500-68382519 | Msa1033330:intron | 30.0% | |
| TTGAAGAATTAGAATGCCAA+GGG | + | chr7_1:68382501-68382520 | Msa1033330:intron | 30.0% | |
| TTAGAAAACATGAACGAGAA+AGG | + | chr7_1:68382549-68382568 | Msa1033330:intron | 30.0% | |
| TAGAAAACATGAACGAGAAA+GGG | + | chr7_1:68382550-68382569 | Msa1033330:intron | 30.0% | |
| AAAAGTCAGAAAACATGGAT+GGG | - | chr7_1:68382769-68382788 | None:intergenic | 30.0% | |
| AAAAAGTCAGAAAACATGGA+TGG | - | chr7_1:68382770-68382789 | None:intergenic | 30.0% | |
| AATTTCTTAAGGAAATGGAG+AGG | + | chr7_1:68382866-68382885 | Msa1033330:intron | 30.0% | |
| TTGAATTTCAATATGATCCC+CGG | - | chr7_1:68383046-68383065 | None:intergenic | 30.0% | |
| GGGATCATATTGAAATTCAA+TGG | + | chr7_1:68383046-68383065 | Msa1033330:CDS | 30.0% | |
| CATATTGAAATTCAATGGAG+AGG | + | chr7_1:68383051-68383070 | Msa1033330:CDS | 30.0% | |
| TAACAAAAGTTTAGGTGTGT+TGG | - | chr7_1:68383132-68383151 | None:intergenic | 30.0% | |
| !! | TACGTGTATCGATTAATTCA+TGG | + | chr7_1:68383175-68383194 | Msa1033330:intron | 30.0% |
| TTATTGTATAGAGACTTTGG+TGG | + | chr7_1:68383363-68383382 | Msa1033330:intron | 30.0% | |
| AAAATTCGATCGGAAACTAT+GGG | + | chr7_1:68383464-68383483 | Msa1033330:CDS | 30.0% | |
| AGAAGAGATTGAAAAATGGA+AGG | + | chr7_1:68383510-68383529 | Msa1033330:CDS | 30.0% | |
| ! | TTTCCCGAATCCATTTTAGA+TGG | + | chr7_1:68378742-68378761 | Msa1033330:CDS | 35.0% |
| TGATGAGTTCTATTGGTGAA+AGG | - | chr7_1:68378780-68378799 | None:intergenic | 35.0% | |
| ATTCAGATGAAGCAAAAGTG+GGG | + | chr7_1:68378859-68378878 | Msa1033330:intron | 35.0% | |
| TGTAACATCTATAACAGCTG+AGG | + | chr7_1:68378924-68378943 | Msa1033330:CDS | 35.0% | |
| !! | TTGGTTCTTTTAGTGGTTCT+TGG | + | chr7_1:68378995-68379014 | Msa1033330:CDS | 35.0% |
| TATGATCCAAGACATAGCAT+AGG | - | chr7_1:68379021-68379040 | None:intergenic | 35.0% | |
| TTGTATTTGTCACTAGAGAG+TGG | + | chr7_1:68379099-68379118 | Msa1033330:intron | 35.0% | |
| GGTTTCCAGCTCAATTATTT+AGG | + | chr7_1:68379130-68379149 | Msa1033330:intron | 35.0% | |
| CGTTCACTCAAATATGATGA+TGG | - | chr7_1:68379211-68379230 | None:intergenic | 35.0% | |
| TTTCAGGCAAGGTATACATA+CGG | + | chr7_1:68379530-68379549 | Msa1033330:intron | 35.0% | |
| TATGGTCTGAACCAATACTA+TGG | + | chr7_1:68379912-68379931 | Msa1033330:intron | 35.0% | |
| TGTGACTTACCATCATCATT+TGG | + | chr7_1:68379962-68379981 | Msa1033330:intron | 35.0% | |
| ! | TTTTCTACACCTTCAACCAT+TGG | - | chr7_1:68380336-68380355 | None:intergenic | 35.0% |
| ! | GGTTGAAGGTGTAGAAAAAT+TGG | + | chr7_1:68380338-68380357 | Msa1033330:CDS | 35.0% |
| TGTTAGTAATGTACCACACT+TGG | + | chr7_1:68380395-68380414 | Msa1033330:CDS | 35.0% | |
| TAATGTACCACACTTGGAAA+TGG | + | chr7_1:68380401-68380420 | Msa1033330:CDS | 35.0% | |
| AAAATTTGTGTGCTCCAAAG+AGG | + | chr7_1:68380542-68380561 | Msa1033330:CDS | 35.0% | |
| AAATTTGTGTGCTCCAAAGA+GGG | + | chr7_1:68380543-68380562 | Msa1033330:CDS | 35.0% | |
| ATTTCACTTGATCGGAAGAT+TGG | + | chr7_1:68380648-68380667 | Msa1033330:intron | 35.0% | |
| TAGTCCTATCTAAGCAATCT+CGG | - | chr7_1:68380737-68380756 | None:intergenic | 35.0% | |
| !! | CTAAAAAAAGGCATCCAACT+TGG | + | chr7_1:68380754-68380773 | Msa1033330:intron | 35.0% |
| ATGGAAGTCTACATGAGATT+AGG | + | chr7_1:68381261-68381280 | Msa1033330:CDS | 35.0% | |
| !! | TTTGTTTCTTTTCGCTTGTG+CGG | - | chr7_1:68381744-68381763 | Msa1033340:intron | 35.0% |
| TTGCATCATTCTCTAGTGTT+AGG | - | chr7_1:68381863-68381882 | Msa1033340:CDS | 35.0% | |
| AACACTAGAGAATGATGCAA+AGG | + | chr7_1:68381863-68381882 | Msa1033330:intron | 35.0% | |
| !! | TGTTCATTTTTCGGCTGTTT+TGG | - | chr7_1:68381900-68381919 | Msa1033340:CDS | 35.0% |
| !! | TTGTCCGGATGTTCATTTTT+CGG | - | chr7_1:68381909-68381928 | Msa1033340:CDS | 35.0% |
| CCTAAAGGAAGAATCATTAG+AGG | - | chr7_1:68382189-68382208 | Msa1033340:intron | 35.0% | |
| CCTCTAATGATTCTTCCTTT+AGG | + | chr7_1:68382186-68382205 | Msa1033330:intron | 35.0% | |
| CTGTTGTATTGTTGTCCTAA+AGG | - | chr7_1:68382204-68382223 | Msa1033340:intron | 35.0% | |
| TTCATCATTGCTTATGGACT+TGG | + | chr7_1:68382280-68382299 | Msa1033330:intron | 35.0% | |
| AAAAGACAGCAAAGACATGA+AGG | - | chr7_1:68382531-68382550 | Msa1033340:CDS | 35.0% | |
| TTGTGGGGAATAATATCAAC+TGG | + | chr7_1:68382944-68382963 | Msa1033330:CDS | 35.0% | |
| TGTGGGGAATAATATCAACT+GGG | + | chr7_1:68382945-68382964 | Msa1033330:CDS | 35.0% | |
| ACATGAAGAGGTTTCAACTA+AGG | - | chr7_1:68382986-68383005 | None:intergenic | 35.0% | |
| ! | TGTTATCAAGATCTAAAGCC+CGG | + | chr7_1:68383024-68383043 | Msa1033330:CDS | 35.0% |
| TGAATTTCAATATGATCCCC+GGG | - | chr7_1:68383045-68383064 | None:intergenic | 35.0% | |
| TCGTATTTGATCTCACCATA+AGG | - | chr7_1:68383090-68383109 | None:intergenic | 35.0% | |
| !!! | TCATGGTTTTAATTGCAGAC+CGG | + | chr7_1:68383192-68383211 | Msa1033330:intron | 35.0% |
| ATGCTATGCAGACATAACAA+TGG | + | chr7_1:68383430-68383449 | Msa1033330:CDS | 35.0% | |
| TGCTATGCAGACATAACAAT+GGG | + | chr7_1:68383431-68383450 | Msa1033330:CDS | 35.0% | |
| GAACAAGCAGAAAATTCGAT+CGG | + | chr7_1:68383454-68383473 | Msa1033330:CDS | 35.0% | |
| GAAAATTCGATCGGAAACTA+TGG | + | chr7_1:68383463-68383482 | Msa1033330:CDS | 35.0% | |
| AAATTCGATCGGAAACTATG+GGG | + | chr7_1:68383465-68383484 | Msa1033330:CDS | 35.0% | |
| ACATCTATAACAGCTGAGGA+AGG | + | chr7_1:68378928-68378947 | Msa1033330:CDS | 40.0% | |
| CATCTATAACAGCTGAGGAA+GGG | + | chr7_1:68378929-68378948 | Msa1033330:CDS | 40.0% | |
| !! | GGATCACTTGGTTCTTTTAG+TGG | + | chr7_1:68378988-68379007 | Msa1033330:CDS | 40.0% |
| GCTATGTCTTGGATCATATC+TGG | + | chr7_1:68379023-68379042 | Msa1033330:CDS | 40.0% | |
| TCAGGGACTATATGTTCATG+AGG | + | chr7_1:68379475-68379494 | Msa1033330:intron | 40.0% | |
| ! | TTTGGAGTCATAGCTAAGCA+AGG | - | chr7_1:68379501-68379520 | None:intergenic | 40.0% |
| CTCCAAAACTGATAGCTTTC+AGG | + | chr7_1:68379514-68379533 | Msa1033330:CDS | 40.0% | |
| ! | TGCCTGAAAGCTATCAGTTT+TGG | - | chr7_1:68379519-68379538 | None:intergenic | 40.0% |
| AAACTGATAGCTTTCAGGCA+AGG | + | chr7_1:68379519-68379538 | Msa1033330:CDS | 40.0% | |
| TTCAGGCAAGGTATACATAC+GGG | + | chr7_1:68379531-68379550 | Msa1033330:intron | 40.0% | |
| GTGGCACATTAAAACTCCAA+TGG | + | chr7_1:68379774-68379793 | Msa1033330:intron | 40.0% | |
| !! | TATTGGTTCAGACCATAGAG+AGG | - | chr7_1:68379909-68379928 | None:intergenic | 40.0% |
| AAGTCACAGTAATGAGGAGA+AGG | - | chr7_1:68379950-68379969 | None:intergenic | 40.0% | |
| GATGGTAAGTCACAGTAATG+AGG | - | chr7_1:68379956-68379975 | None:intergenic | 40.0% | |
| AAATTCAGAATCGACGTCGT+CGG | - | chr7_1:68380037-68380056 | None:intergenic | 40.0% | |
| GTCTACAATACAGTGGAACA+AGG | - | chr7_1:68380067-68380086 | None:intergenic | 40.0% | |
| ACATCCAATCCAATGGTTGA+AGG | + | chr7_1:68380324-68380343 | Msa1033330:CDS | 40.0% | |
| TACACCTTCAACCATTGGAT+TGG | - | chr7_1:68380331-68380350 | None:intergenic | 40.0% | |
| GTGAATGATATCGTGCAACA+GGG | + | chr7_1:68380360-68380379 | Msa1033330:CDS | 40.0% | |
| TCAAAGTCCATTTCCAAGTG+TGG | - | chr7_1:68380411-68380430 | None:intergenic | 40.0% | |
| AACAGGATGTTTAGCACGTA+TGG | + | chr7_1:68380623-68380642 | Msa1033330:CDS | 40.0% | |
| AATGTGGACACTGTTGATCT+TGG | + | chr7_1:68380690-68380709 | Msa1033330:intron | 40.0% | |
| ! | TCCAACTTGGCTTGAGAAAT+TGG | + | chr7_1:68380767-68380786 | Msa1033330:intron | 40.0% |
| TCCAATTTCTCAAGCCAAGT+TGG | - | chr7_1:68380771-68380790 | None:intergenic | 40.0% | |
| GAGACAAAAAAGGCTATCAC+AGG | + | chr7_1:68380797-68380816 | Msa1033330:intron | 40.0% | |
| CAATCTCCTGCAAACAATGA+TGG | + | chr7_1:68380907-68380926 | Msa1033330:intron | 40.0% | |
| TGTGTACCATCATTGTTTGC+AGG | - | chr7_1:68380916-68380935 | None:intergenic | 40.0% | |
| ! | GATGGTACACATGCTTTGAA+TGG | + | chr7_1:68380925-68380944 | Msa1033330:intron | 40.0% |
| ! | GTACACATGCTTTGAATGGA+AGG | + | chr7_1:68380929-68380948 | Msa1033330:intron | 40.0% |
| AATGGAAGCCAATCTGGATA+TGG | + | chr7_1:68381170-68381189 | Msa1033330:intron | 40.0% | |
| ATATGGAAGCCATGCTTTGA+TGG | + | chr7_1:68381187-68381206 | Msa1033330:intron | 40.0% | |
| ! | TTTGAGATGCCATCAAAGCA+TGG | - | chr7_1:68381199-68381218 | None:intergenic | 40.0% |
| CCATTGTCAGCTTCTGTTAA+AGG | - | chr7_1:68381245-68381264 | None:intergenic | 40.0% | |
| CCTTTAACAGAAGCTGACAA+TGG | + | chr7_1:68381242-68381261 | Msa1033330:intron | 40.0% | |
| !! | TTGGGTCGATGCTCTTATTT+TGG | + | chr7_1:68381453-68381472 | Msa1033330:intron | 40.0% |
| ! | AGCAGAACCTTTTCTATAGC+AGG | - | chr7_1:68381580-68381599 | Msa1033340:intron | 40.0% |
| !! | TTTAGGGAGTGTTGTTTCAC+GGG | - | chr7_1:68381814-68381833 | Msa1033340:intron | 40.0% |
| !! | CTTTAGGGAGTGTTGTTTCA+CGG | - | chr7_1:68381815-68381834 | Msa1033340:intron | 40.0% |
| CATCATTCTCTAGTGTTAGG+CGG | - | chr7_1:68381860-68381879 | Msa1033340:CDS | 40.0% | |
| ACAGCCGAAAAATGAACATC+CGG | + | chr7_1:68381902-68381921 | Msa1033330:intron | 40.0% | |
| ! | TTGGTGTCTGCCATCAATAT+GGG | - | chr7_1:68382076-68382095 | Msa1033340:intron | 40.0% |
| TAGGACAACAATACAACAGC+AGG | + | chr7_1:68382205-68382224 | Msa1033330:intron | 40.0% | |
| ! | AAGACATGAAGGTTTTCCCT+TGG | - | chr7_1:68382520-68382539 | Msa1033340:intron | 40.0% |
| AAAACATGAACGAGAAAGGG+CGG | + | chr7_1:68382553-68382572 | Msa1033330:intron | 40.0% | |
| GTCACAGTAACATATGGTGT+TGG | + | chr7_1:68382585-68382604 | Msa1033330:intron | 40.0% | |
| !! | TATGGTGTTGGCTTCTAGAA+AGG | + | chr7_1:68382597-68382616 | Msa1033330:intron | 40.0% |
| !! | ATGGTGTTGGCTTCTAGAAA+GGG | + | chr7_1:68382598-68382617 | Msa1033330:intron | 40.0% |
| !! | AAGTGACGGATGTCGTTAAT+CGG | + | chr7_1:68382688-68382707 | Msa1033330:intron | 40.0% |
| CGTGGCACATTAAAACTCAA+TGG | - | chr7_1:68382812-68382831 | None:intergenic | 40.0% | |
| ! | TTTCATTTAGGACACGCAGT+GGG | + | chr7_1:68382911-68382930 | Msa1033330:intron | 40.0% |
| GAAGAGGTTTCAACTAAGGA+TGG | - | chr7_1:68382982-68383001 | None:intergenic | 40.0% | |
| ! | CTTGATAACAATCAGACACG+TGG | - | chr7_1:68383014-68383033 | None:intergenic | 40.0% |
| ! | GTTATCAAGATCTAAAGCCC+GGG | + | chr7_1:68383025-68383044 | Msa1033330:CDS | 40.0% |
| ! | TTATCAAGATCTAAAGCCCG+GGG | + | chr7_1:68383026-68383045 | Msa1033330:CDS | 40.0% |
| GGAAACACTCAAACTCCTTA+TGG | + | chr7_1:68383072-68383091 | Msa1033330:CDS | 40.0% | |
| TATTGCTCCTGCCAAAATTC+TGG | + | chr7_1:68383263-68383282 | Msa1033330:CDS | 40.0% | |
| !! | TTTCTCACCAGAATTTTGGC+AGG | - | chr7_1:68383273-68383292 | None:intergenic | 40.0% |
| GCTATGCAGACATAACAATG+GGG | + | chr7_1:68383432-68383451 | Msa1033330:CDS | 40.0% | |
| AATTCGATCGGAAACTATGG+GGG | + | chr7_1:68383466-68383485 | Msa1033330:CDS | 40.0% | |
| CAAAAGTGGGGAAGAGTCAT+TGG | + | chr7_1:68378871-68378890 | Msa1033330:CDS | 45.0% | |
| !! | CATTGGTGATGTTGCCCTAA+AGG | + | chr7_1:68378888-68378907 | Msa1033330:CDS | 45.0% |
| ATGCCATTGCCACTCCTTTA+GGG | - | chr7_1:68378905-68378924 | None:intergenic | 45.0% | |
| TCTTGGCCTATGCTATGTCT+TGG | + | chr7_1:68379012-68379031 | Msa1033330:CDS | 45.0% | |
| ! | CACTAGAGAGTGGCAAGTTT+TGG | + | chr7_1:68379109-68379128 | Msa1033330:intron | 45.0% |
| TTGAGTATGAGCTTGACACG+TGG | + | chr7_1:68379755-68379774 | Msa1033330:intron | 45.0% | |
| TGAAGGAAGTGAAACGACGA+AGG | - | chr7_1:68379886-68379905 | None:intergenic | 45.0% | |
| TCACTTCCTTCACCTCTCTA+TGG | + | chr7_1:68379894-68379913 | Msa1033330:intron | 45.0% | |
| TTCAGACCATAGAGAGGTGA+AGG | - | chr7_1:68379903-68379922 | None:intergenic | 45.0% | |
| GGTTGGGAACACCATAGTAT+TGG | - | chr7_1:68379926-68379945 | None:intergenic | 45.0% | |
| GTAATGAGGAGAAGGAGGTT+GGG | - | chr7_1:68379942-68379961 | None:intergenic | 45.0% | |
| AGTAATGAGGAGAAGGAGGT+TGG | - | chr7_1:68379943-68379962 | None:intergenic | 45.0% | |
| TCACAGTAATGAGGAGAAGG+AGG | - | chr7_1:68379947-68379966 | None:intergenic | 45.0% | |
| GCTTCAGGTCTACAATACAG+TGG | - | chr7_1:68380074-68380093 | None:intergenic | 45.0% | |
| !! | ACGTGTGTCGTTTCTACCAT+TGG | - | chr7_1:68380102-68380121 | None:intergenic | 45.0% |
| AATGGTAGAAACGACACACG+TGG | + | chr7_1:68380101-68380120 | Msa1033330:intron | 45.0% | |
| ! | AAAATCTTATCGGTGCCCAG+AGG | - | chr7_1:68380159-68380178 | None:intergenic | 45.0% |
| GGTGAATGATATCGTGCAAC+AGG | + | chr7_1:68380359-68380378 | Msa1033330:CDS | 45.0% | |
| ! | GGAAATGGACTTTGAGTCTG+AGG | + | chr7_1:68380416-68380435 | Msa1033330:CDS | 45.0% |
| TGGACACTGTTGATCTTGGT+GGG | + | chr7_1:68380694-68380713 | Msa1033330:intron | 45.0% | |
| AGAGCCGAGATTGCTTAGAT+AGG | + | chr7_1:68380730-68380749 | Msa1033330:intron | 45.0% | |
| CCAAGCATGTATGCCATCAT+GGG | - | chr7_1:68381150-68381169 | None:intergenic | 45.0% | |
| TCCAAGCATGTATGCCATCA+TGG | - | chr7_1:68381151-68381170 | None:intergenic | 45.0% | |
| GATGGCATACATGCTTGGAA+TGG | + | chr7_1:68381152-68381171 | Msa1033330:intron | 45.0% | |
| CATGGCTTCCATATCCAGAT+TGG | - | chr7_1:68381181-68381200 | None:intergenic | 45.0% | |
| !!! | TTGTGCGGTTGGTTTTTGTG+CGG | - | chr7_1:68381729-68381748 | Msa1033340:intron | 45.0% |
| ! | TTTCTTTTCGCTTGTGCGGT+TGG | - | chr7_1:68381740-68381759 | Msa1033340:intron | 45.0% |
| ! | TACGGCACCCTTGTTTGTAT+TGG | - | chr7_1:68381767-68381786 | Msa1033340:intron | 45.0% |
| !! | CAAACAAGGGTGCCGTATAT+AGG | + | chr7_1:68381770-68381789 | Msa1033330:intron | 45.0% |
| TTGTTTCACGGGTTTGTGTC+GGG | - | chr7_1:68381803-68381822 | Msa1033340:intron | 45.0% | |
| ! | GTTGTTTCACGGGTTTGTGT+CGG | - | chr7_1:68381804-68381823 | Msa1033340:intron | 45.0% |
| GAACATCCGGACAAGAGAAA+TGG | + | chr7_1:68381915-68381934 | Msa1033330:intron | 45.0% | |
| TGTATGCTACCTATGCGTAG+GGG | - | chr7_1:68381942-68381961 | Msa1033340:CDS | 45.0% | |
| CTGTATGCTACCTATGCGTA+GGG | - | chr7_1:68381943-68381962 | Msa1033340:CDS | 45.0% | |
| TATTTGCTCCTGCTGTCAGT+TGG | - | chr7_1:68382042-68382061 | Msa1033340:intron | 45.0% | |
| TGGTGTCTGCCATCAATATG+GGG | - | chr7_1:68382075-68382094 | Msa1033340:intron | 45.0% | |
| ! | GTTGGTGTCTGCCATCAATA+TGG | - | chr7_1:68382077-68382096 | Msa1033340:intron | 45.0% |
| !!! | GTTTTAGATTTTGGGGCGTC+TGG | - | chr7_1:68382131-68382150 | Msa1033340:intron | 45.0% |
| TGGGTCGTCACAGTAACATA+TGG | + | chr7_1:68382579-68382598 | Msa1033330:intron | 45.0% | |
| !! | TGTTGGCTTCTAGAAAGGGT+AGG | + | chr7_1:68382602-68382621 | Msa1033330:intron | 45.0% |
| GAAAGGGTAGGTTTGCAAAG+AGG | + | chr7_1:68382614-68382633 | Msa1033330:intron | 45.0% | |
| GGAGAGACAATTGTGAGAGA+TGG | + | chr7_1:68382709-68382728 | Msa1033330:intron | 45.0% | |
| TTGAGTATGAGCTTGACACG+TGG | - | chr7_1:68379755-68379774 | None:intergenic | 45.0% | |
| ! | GTTTCATTTAGGACACGCAG+TGG | + | chr7_1:68382910-68382929 | Msa1033330:intron | 45.0% |
| AGTGGGAATTGGAGGATTGT+GGG | + | chr7_1:68382928-68382947 | Msa1033330:CDS | 45.0% | |
| GTTTAGGTGTGTTGGACTCT+CGG | - | chr7_1:68383124-68383143 | None:intergenic | 45.0% | |
| !!! | TGGTTTTAATTGCAGACCGG+TGG | + | chr7_1:68383195-68383214 | Msa1033330:intron | 45.0% |
| GACCAATAACAGCATACCAC+CGG | - | chr7_1:68383214-68383233 | None:intergenic | 45.0% | |
| AGTTCAAGCAATACCCTCGT+GGG | + | chr7_1:68383389-68383408 | Msa1033330:CDS | 45.0% | |
| !! | ATATTAAACTATATATTATA+CGG | - | chr7_1:68383319-68383338 | None:intergenic | 5.0% |
| GTGATGTTGCCCTAAAGGAG+TGG | + | chr7_1:68378893-68378912 | Msa1033330:CDS | 50.0% | |
| TTGCCCTAAAGGAGTGGCAA+TGG | + | chr7_1:68378899-68378918 | Msa1033330:CDS | 50.0% | |
| CATGCCATTGCCACTCCTTT+AGG | - | chr7_1:68378906-68378925 | None:intergenic | 50.0% | |
| TCGTTGCTTCACTTCTGCGT+TGG | + | chr7_1:68379998-68380017 | Msa1033330:intron | 50.0% | |
| ! | AGACCTGAAGCTTGCTCCAA+TGG | + | chr7_1:68380083-68380102 | Msa1033330:intron | 50.0% |
| CTACCATTGGAGCAAGCTTC+AGG | - | chr7_1:68380089-68380108 | None:intergenic | 50.0% | |
| TCACCATTCATCACCACCTC+TGG | + | chr7_1:68380140-68380159 | Msa1033330:intron | 50.0% | |
| CACCATTCATCACCACCTCT+GGG | + | chr7_1:68380141-68380160 | Msa1033330:intron | 50.0% | |
| GCTCGAGCAGAAACTAGAAC+AGG | + | chr7_1:68380606-68380625 | Msa1033330:CDS | 50.0% | |
| GTGGACACTGTTGATCTTGG+TGG | + | chr7_1:68380693-68380712 | Msa1033330:intron | 50.0% | |
| GGACACTGTTGATCTTGGTG+GGG | + | chr7_1:68380695-68380714 | Msa1033330:intron | 50.0% | |
| CAATCTCCAGCAACCCATGA+TGG | + | chr7_1:68381134-68381153 | Msa1033330:intron | 50.0% | |
| ! | TGTATGCCATCATGGGTTGC+TGG | - | chr7_1:68381143-68381162 | None:intergenic | 50.0% |
| CCCATGATGGCATACATGCT+TGG | + | chr7_1:68381147-68381166 | Msa1033330:intron | 50.0% | |
| GCTTGGAATGGAAGCCAATC+TGG | + | chr7_1:68381164-68381183 | Msa1033330:intron | 50.0% | |
| !! | ACAAGGGTGCCGTATATAGG+CGG | + | chr7_1:68381773-68381792 | Msa1033330:intron | 50.0% |
| TCGGGTGTTCCGCCTATATA+CGG | - | chr7_1:68381785-68381804 | Msa1033340:intron | 50.0% | |
| !!! | TAGGCGGCGGGGTTTTATTT+TGG | - | chr7_1:68381844-68381863 | Msa1033340:intron | 50.0% |
| ATTCTCTAGTGTTAGGCGGC+GGG | - | chr7_1:68381856-68381875 | Msa1033340:CDS | 50.0% | |
| CATTCTCTAGTGTTAGGCGG+CGG | - | chr7_1:68381857-68381876 | Msa1033340:CDS | 50.0% | |
| GTATGCTACCTATGCGTAGG+GGG | - | chr7_1:68381941-68381960 | Msa1033340:CDS | 50.0% | |
| GCTGTATGCTACCTATGCGT+AGG | - | chr7_1:68381944-68381963 | Msa1033340:CDS | 50.0% | |
| !! | TACGCGGTTTGTTGTGCAAG+GGG | - | chr7_1:68381982-68382001 | Msa1033340:CDS | 50.0% |
| !! | CTACGCGGTTTGTTGTGCAA+GGG | - | chr7_1:68381983-68382002 | Msa1033340:CDS | 50.0% |
| !! | TCTACGCGGTTTGTTGTGCA+AGG | - | chr7_1:68381984-68382003 | Msa1033340:CDS | 50.0% |
| TGCTAACACCAACTGACAGC+AGG | + | chr7_1:68382031-68382050 | Msa1033330:intron | 50.0% | |
| TGTCTGCCATCAATATGGGG+CGG | - | chr7_1:68382072-68382091 | Msa1033340:intron | 50.0% | |
| !! | CATTGCAAGTGCTGCGGTTT+TGG | - | chr7_1:68382099-68382118 | Msa1033340:CDS | 50.0% |
| ! | TGTGCTCATTGCAAGTGCTG+CGG | - | chr7_1:68382105-68382124 | Msa1033340:CDS | 50.0% |
| ! | TGAACGAGAAAGGGCGGATT+TGG | + | chr7_1:68382559-68382578 | Msa1033330:intron | 50.0% |
| ! | GAACGAGAAAGGGCGGATTT+GGG | + | chr7_1:68382560-68382579 | Msa1033330:intron | 50.0% |
| !! | GAGGGCTTTGCTTTGAGATG+CGG | + | chr7_1:68382656-68382675 | Msa1033330:intron | 50.0% |
| !! | TTTGCTTTGAGATGCGGCGA+CGG | + | chr7_1:68382662-68382681 | Msa1033330:intron | 50.0% |
| TTAGGACACGCAGTGGGAAT+TGG | + | chr7_1:68382917-68382936 | Msa1033330:intron | 50.0% | |
| CAGTGGGAATTGGAGGATTG+TGG | + | chr7_1:68382927-68382946 | Msa1033330:CDS | 50.0% | |
| GTGGGAATTGGAGGATTGTG+GGG | + | chr7_1:68382929-68382948 | Msa1033330:CDS | 50.0% | |
| GACCGGTGGTATGCTGTTAT+TGG | + | chr7_1:68383209-68383228 | Msa1033330:intron | 50.0% | |
| GAGTTCAAGCAATACCCTCG+TGG | + | chr7_1:68383388-68383407 | Msa1033330:CDS | 50.0% | |
| TTCTCATGCTTGACCCACGA+GGG | - | chr7_1:68383405-68383424 | None:intergenic | 50.0% | |
| TTCAGAATCGACGTCGTCGG+AGG | - | chr7_1:68380034-68380053 | None:intergenic | 55.0% | |
| ! | TGCCCAGAGGTGGTGATGAA+TGG | - | chr7_1:68380146-68380165 | None:intergenic | 55.0% |
| ! | ATCTTATCGGTGCCCAGAGG+TGG | - | chr7_1:68380156-68380175 | None:intergenic | 55.0% |
| ! | GGACTTTGAGTCTGAGGCCT+TGG | + | chr7_1:68380422-68380441 | Msa1033330:CDS | 55.0% |
| TGCTCCAAAGAGGGTAGACG+CGG | + | chr7_1:68380552-68380571 | Msa1033330:CDS | 55.0% | |
| TTCTCTAGTGTTAGGCGGCG+GGG | - | chr7_1:68381855-68381874 | Msa1033340:CDS | 55.0% | |
| AGGGGGCCATTTCTCTTGTC+CGG | - | chr7_1:68381924-68381943 | Msa1033340:CDS | 55.0% | |
| AGAAATGGCCCCCTACGCAT+AGG | + | chr7_1:68381930-68381949 | Msa1033330:intron | 55.0% | |
| !! | ACGCGGTTTGTTGTGCAAGG+GGG | - | chr7_1:68381981-68382000 | Msa1033340:CDS | 55.0% |
| CACCAACCGCCCCATATTGA+TGG | + | chr7_1:68382063-68382082 | Msa1033330:intron | 55.0% | |
| TGCCATCAATATGGGGCGGT+TGG | - | chr7_1:68382068-68382087 | Msa1033340:intron | 55.0% | |
| !! | GCAAGTGCTGCGGTTTTGGT+TGG | - | chr7_1:68382095-68382114 | Msa1033340:intron | 55.0% |
| ! | AGGTTTGCAAAGAGGCGCGA+CGG | + | chr7_1:68382622-68382641 | Msa1033330:intron | 55.0% |
| CACGTGGCGAACACATGAAG+AGG | - | chr7_1:68382998-68383017 | None:intergenic | 55.0% | |
| CTTCTCATGCTTGACCCACG+AGG | - | chr7_1:68383406-68383425 | None:intergenic | 55.0% | |
| GACACCGCGTCTACCCTCTT+TGG | - | chr7_1:68380559-68380578 | None:intergenic | 60.0% | |
| !! | GGTTTGTTGTGCAAGGGGGC+TGG | - | chr7_1:68381977-68381996 | Msa1033340:CDS | 60.0% |
| ATCTGTGGCGCGGTTCTACG+CGG | - | chr7_1:68381998-68382017 | Msa1033340:CDS | 60.0% | |
| CAGCTGCCAGCAGCTATCTG+TGG | - | chr7_1:68382013-68382032 | Msa1033340:intron | 60.0% | |
| ! | TTTGCAAAGAGGCGCGACGG+TGG | + | chr7_1:68382625-68382644 | Msa1033330:intron | 60.0% |
| GGACACGCAGTGGGAATTGG+AGG | + | chr7_1:68382920-68382939 | Msa1033330:intron | 60.0% | |
| ACCGCGCCACAGATAGCTGC+TGG | + | chr7_1:68382004-68382023 | Msa1033330:intron | 65.0% | |
| GCCAGCAGCTATCTGTGGCG+CGG | - | chr7_1:68382008-68382027 | Msa1033340:CDS | 65.0% | |
| !! | GCTTTGAGATGCGGCGACGG+CGG | + | chr7_1:68382665-68382684 | Msa1033330:intron | 65.0% |
| ! | AAGAGGCGCGACGGTGGCAG+TGG | + | chr7_1:68382631-68382650 | Msa1033330:intron | 70.0% |
| TGCGGCGACGGCGGAAGTGA+CGG | + | chr7_1:68382674-68382693 | Msa1033330:intron | 70.0% | |
| AGGCGCGACGGTGGCAGTGG+CGG | + | chr7_1:68382634-68382653 | Msa1033330:intron | 75.0% | |
| ! | GCGACGGTGGCAGTGGCGGA+GGG | + | chr7_1:68382638-68382657 | Msa1033330:intron | 75.0% |
| ! | CGCGACGGTGGCAGTGGCGG+AGG | + | chr7_1:68382637-68382656 | Msa1033330:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 68378685 | 68383561 | 68378685 | ID=Msa1033330;Name=Msa1033330 |
| chr7_1 | mRNA | 68378685 | 68383561 | 68378685 | ID=Msa1033330-mRNA-1;Parent=Msa1033330;Name=Msa1033330-mRNA-1;_AED=0.30;_eAED=0.35;_QI=0|0|0|1|0.25|0.33|9|0|419 |
| chr7_1 | exon | 68378685 | 68378810 | 68378685 | ID=Msa1033330-mRNA-1:exon:15996;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68378865 | 68379100 | 68378865 | ID=Msa1033330-mRNA-1:exon:15997;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68379479 | 68379540 | 68379479 | ID=Msa1033330-mRNA-1:exon:15998;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68380310 | 68380463 | 68380310 | ID=Msa1033330-mRNA-1:exon:15999;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68380473 | 68380644 | 68380473 | ID=Msa1033330-mRNA-1:exon:16000;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68381252 | 68381325 | 68381252 | ID=Msa1033330-mRNA-1:exon:16001;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68382921 | 68383093 | 68382921 | ID=Msa1033330-mRNA-1:exon:16002;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68383210 | 68383284 | 68383210 | ID=Msa1033330-mRNA-1:exon:16003;Parent=Msa1033330-mRNA-1 |
| chr7_1 | exon | 68383374 | 68383561 | 68383374 | ID=Msa1033330-mRNA-1:exon:16004;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68378685 | 68378810 | 68378685 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68378865 | 68379100 | 68378865 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68379479 | 68379540 | 68379479 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68380310 | 68380463 | 68380310 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68380473 | 68380644 | 68380473 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68381252 | 68381325 | 68381252 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68382921 | 68383093 | 68382921 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68383210 | 68383284 | 68383210 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| chr7_1 | CDS | 68383374 | 68383561 | 68383374 | ID=Msa1033330-mRNA-1:cds;Parent=Msa1033330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
