AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0747180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747180 MtrunA17_Chr3g0082121 71.019 697 161 3 22 685 5 693 0.0 1008
Msa0747180 MtrunA17_Chr1g0164591 76.190 315 67 1 134 448 1 307 3.64e-179 516
Msa0747180 MtrunA17_Chr2g0324011 46.246 586 292 6 50 622 4 579 1.57e-175 518
Msa0747180 MtrunA17_Chr6g0458391 42.004 569 305 7 49 612 218 766 4.14e-157 476
Msa0747180 MtrunA17_Chr6g0458391 34.161 161 101 3 27 187 65 220 2.44e-20 96.7
Msa0747180 MtrunA17_Chr1g0203721 38.012 684 372 10 24 662 27 703 2.63e-152 468
Msa0747180 MtrunA17_Chr5g0448761 35.511 597 364 8 56 640 60 647 1.79e-122 387
Msa0747180 MtrunA17_Chr1g0202341 36.427 571 340 9 56 611 47 609 4.92e-114 362
Msa0747180 MtrunA17_Chr8g0363841 34.532 556 345 8 68 611 29 577 1.54e-109 349
Msa0747180 MtrunA17_Chr5g0401121 93.210 162 11 0 1 162 1 162 5.01e-103 314
Msa0747180 MtrunA17_Chr2g0287651 33.217 575 366 7 58 622 77 643 7.25e-98 323
Msa0747180 MtrunA17_Chr1g0207551 31.616 563 373 7 56 612 34 590 1.41e-94 313
Msa0747180 MtrunA17_Chr2g0329031 32.143 560 354 10 56 606 14 556 1.57e-88 295
Msa0747180 MtrunA17_Chr3g0080351 29.909 662 393 15 56 673 76 710 3.04e-84 286
Msa0747180 MtrunA17_Chr7g0258861 49.653 288 137 6 56 338 10 294 6.30e-81 262
Msa0747180 MtrunA17_Chr2g0296781 31.724 580 354 18 60 616 1 561 9.68e-81 274
Msa0747180 MtrunA17_Chr1g0203051 29.130 563 373 10 48 598 73 621 9.65e-79 266
Msa0747180 MtrunA17_Chr2g0276841 28.960 625 422 12 50 664 64 676 2.14e-77 264
Msa0747180 MtrunA17_Chr3g0118611 35.714 406 248 6 235 632 122 522 5.61e-77 265
Msa0747180 MtrunA17_Chr1g0198761 30.973 565 372 11 62 612 53 613 9.40e-77 264
Msa0747180 MtrunA17_Chr5g0440451 31.115 601 363 14 40 611 26 604 1.57e-76 266
Msa0747180 MtrunA17_Chr5g0448511 33.182 440 272 8 240 667 22 451 2.86e-74 252
Msa0747180 MtrunA17_Chr2g0287061 30.688 567 338 14 56 613 183 703 4.31e-73 254
Msa0747180 MtrunA17_Chr5g0441581 30.351 570 365 14 56 611 32 583 9.57e-73 251
Msa0747180 MtrunA17_Chr2g0294841 26.724 696 458 15 48 696 37 727 8.89e-72 250
Msa0747180 MtrunA17_Chr6g0477261 33.115 459 267 13 183 616 7 450 6.34e-67 234
Msa0747180 MtrunA17_Chr2g0291581 29.780 591 367 14 41 611 59 621 1.33e-66 234
Msa0747180 MtrunA17_Chr2g0290391 27.676 654 423 15 21 653 26 650 1.88e-65 231
Msa0747180 MtrunA17_Chr1g0149131 77.679 112 25 0 335 446 1 112 6.29e-60 198
Msa0747180 MtrunA17_Chr1g0196541 28.130 583 371 15 60 616 1 561 7.22e-60 216
Msa0747180 MtrunA17_Chr5g0431001 30.698 430 276 9 55 468 60 483 1.19e-52 191
Msa0747180 MtrunA17_Chr2g0291591 28.184 479 319 9 60 529 68 530 7.90e-52 190
Msa0747180 MtrunA17_Chr4g0033611 46.296 108 52 3 56 161 76 179 7.40e-21 93.2
Msa0747180 MtrunA17_Chr2g0329421 37.226 137 75 5 35 165 7 138 1.51e-19 88.2
Msa0747180 MtrunA17_Chr7g0238821 44.037 109 57 3 60 167 1 106 5.11e-17 77.4
Msa0747180 MtrunA17_Chr2g0308841 22.321 224 167 3 396 613 7 229 8.76e-16 78.2
Msa0747180 MtrunA17_Chr3g0078041 39.048 105 62 2 56 159 50 153 6.54e-14 72.0
Msa0747180 MtrunA17_Chr7g0233911 37.143 105 62 3 56 158 34 136 1.77e-13 70.5
Msa0747180 MtrunA17_Chr2g0329361 32.414 145 92 4 42 182 47 189 1.35e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747180 AT4G38180.1 33.594 640 405 9 56 685 73 702 7.78e-118 375
Msa0747180 AT4G15090.1 32.270 564 373 6 56 613 51 611 2.13e-95 316
Msa0747180 AT4G15090.5 32.270 564 373 6 56 613 51 611 2.13e-95 316
Msa0747180 AT4G15090.3 32.270 564 373 6 56 613 51 611 2.13e-95 316
Msa0747180 AT4G15090.2 32.270 564 373 6 56 613 51 611 2.13e-95 316
Msa0747180 AT4G15090.4 32.270 564 373 6 56 613 51 611 2.13e-95 316
Msa0747180 AT3G22170.2 32.056 574 347 9 56 611 70 618 5.72e-88 296
Msa0747180 AT3G22170.1 32.056 574 347 9 56 611 70 618 5.72e-88 296
Msa0747180 AT2G27110.2 31.542 577 352 12 56 623 49 591 5.50e-82 280
Msa0747180 AT2G27110.1 31.542 577 352 12 56 623 49 591 5.50e-82 280
Msa0747180 AT1G76320.3 31.835 556 363 9 60 611 1 544 9.20e-82 276
Msa0747180 AT1G76320.1 31.835 556 363 9 60 611 1 544 1.79e-81 276
Msa0747180 AT1G76320.4 31.835 556 363 9 60 611 1 544 1.79e-81 276
Msa0747180 AT1G76320.2 31.835 556 363 9 60 611 1 544 1.92e-81 276
Msa0747180 AT3G06250.2 29.391 575 351 11 47 614 181 707 3.63e-76 263
Msa0747180 AT3G06250.1 29.391 575 351 11 47 614 181 707 3.63e-76 263
Msa0747180 AT3G06250.3 29.391 575 351 11 47 614 181 707 3.63e-76 263
Msa0747180 AT5G18960.2 30.584 582 343 15 44 614 200 731 3.04e-75 261
Msa0747180 AT5G18960.2 33.051 118 65 2 41 158 28 131 3.28e-11 67.4
Msa0747180 AT5G18960.1 30.584 582 343 15 44 614 200 731 3.04e-75 261
Msa0747180 AT5G18960.1 33.051 118 65 2 41 158 28 131 3.28e-11 67.4
Msa0747180 AT1G10240.2 29.174 569 389 9 49 608 41 604 6.87e-74 254
Msa0747180 AT1G10240.1 29.174 569 389 9 49 608 41 604 6.87e-74 254
Msa0747180 AT2G27110.3 33.838 396 251 6 235 623 55 446 2.29e-69 243
Msa0747180 AT2G32250.8 27.798 554 350 8 60 608 1 509 2.39e-69 244
Msa0747180 AT2G32250.7 27.798 554 350 8 60 608 1 509 2.87e-69 244
Msa0747180 AT2G32250.5 28.108 555 347 9 60 608 42 550 3.81e-69 243
Msa0747180 AT2G32250.2 28.108 555 347 9 60 608 42 550 4.75e-69 244
Msa0747180 AT2G32250.4 28.108 555 347 9 60 608 42 550 4.75e-69 244
Msa0747180 AT2G32250.6 28.108 555 347 9 60 608 42 550 4.95e-69 244
Msa0747180 AT2G32250.1 28.108 555 347 9 60 608 42 550 4.95e-69 244
Msa0747180 AT2G32250.3 28.108 555 347 9 60 608 42 550 4.95e-69 244
Msa0747180 AT4G19990.3 29.545 572 344 11 61 611 26 559 5.86e-62 223
Msa0747180 AT4G19990.4 29.545 572 344 11 61 611 26 559 5.86e-62 223
Msa0747180 AT4G19990.6 29.371 572 345 11 61 611 26 559 8.35e-62 223
Msa0747180 AT4G19990.2 29.371 572 345 11 61 611 26 559 8.35e-62 223
Msa0747180 AT4G19990.5 29.545 572 344 11 61 611 26 559 9.33e-62 222
Msa0747180 AT4G19990.7 29.545 572 344 11 61 611 40 573 1.20e-61 222
Msa0747180 AT1G80010.1 29.372 589 361 15 56 611 95 661 3.00e-61 220
Msa0747180 AT4G38170.1 29.551 379 256 5 240 612 27 400 1.71e-60 214
Msa0747180 AT1G52520.1 27.127 623 415 17 54 657 83 685 4.87e-60 216
Msa0747180 AT5G28530.3 25.589 637 419 15 56 664 55 664 4.64e-58 211
Msa0747180 AT5G28530.2 25.589 637 419 15 56 664 55 664 4.64e-58 211
Msa0747180 AT5G28530.1 25.357 631 432 14 56 664 55 668 5.88e-58 210
Msa0747180 AT4G19990.1 28.996 538 323 11 95 611 3 502 3.62e-54 200
Msa0747180 AT5G28530.4 23.226 620 396 15 56 664 55 605 1.43e-35 144
Msa0747180 AT5G28530.5 23.642 626 382 17 56 664 55 601 1.49e-35 144
Msa0747180 AT3G59470.3 46.226 106 55 2 56 161 70 173 2.63e-21 94.7
Msa0747180 AT3G59470.1 46.226 106 55 2 56 161 70 173 2.63e-21 94.7
Msa0747180 AT3G59470.2 46.226 106 55 2 56 161 82 185 3.30e-21 94.7
Msa0747180 AT3G07500.1 38.760 129 76 2 34 160 9 136 1.47e-15 77.0
Msa0747180 AT2G43280.1 37.500 128 71 4 56 181 22 142 6.60e-14 72.0
Msa0747180 AT4G12850.4 32.540 126 78 3 56 181 11 129 3.02e-12 65.5
Msa0747180 AT2G43280.2 40.659 91 50 3 71 159 2 90 1.20e-11 64.3
Msa0747180 AT4G12850.2 34.951 103 63 2 56 158 11 109 3.57e-11 62.0

Find 133 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAATAACAAACATATTT+TGG 0.063618 5_1:+70824668 Msa0747180:CDS
CCATTGTCAGCTTCTGTTAA+AGG 0.115830 5_1:-70826552 None:intergenic
TCCAACTTGGCTTGAGAAAT+TGG 0.175914 5_1:+70826072 Msa0747180:CDS
CACAGACAAACAATTGTTTA+TGG 0.199392 5_1:+70824808 Msa0747180:CDS
ATTCATCAGCCAATACAATT+TGG 0.204201 5_1:-70824432 None:intergenic
TTGTTTGTCTGTGGCTATTA+AGG 0.204260 5_1:-70824798 None:intergenic
GCACAAATGATAAATGATTA+TGG 0.212778 5_1:+70824697 Msa0747180:CDS
CACAATCCATGAAATGTTTC+TGG 0.237682 5_1:-70824973 None:intergenic
GAAATTTGCTTCGCACTAAA+AGG 0.249768 5_1:+70824542 Msa0747180:CDS
GATTGTGCACTTGGCATATA+AGG 0.257928 5_1:+70824989 Msa0747180:CDS
TCCTAATCTCATTTGACATT+TGG 0.288109 5_1:-70826596 None:intergenic
ACAAATTCATGAAAATCTTT+TGG 0.298226 5_1:-70824466 None:intergenic
ATTGTATTGGCTGATGAATC+TGG 0.322531 5_1:+70824436 Msa0747180:CDS
CATTTCATGGATTGTGCACT+TGG 0.334162 5_1:+70824980 Msa0747180:CDS
TCTTGTAGTGTAAACATTGC+CGG 0.345114 5_1:-70825436 None:intergenic
TAGTGCGAAGCAAATTTCTA+TGG 0.349224 5_1:-70824537 None:intergenic
GCTTGGAATGGAAGCCAATC+TGG 0.361798 5_1:+70826474 Msa0747180:CDS
GACATTCCTCATATTCATCT+TGG 0.362108 5_1:-70825473 None:intergenic
ACAGACAAACAATTGTTTAT+GGG 0.367661 5_1:+70824809 Msa0747180:CDS
TATAGTAGGAAATGTGGTTT+TGG 0.369598 5_1:+70824118 Msa0747180:CDS
CGTCCGTTGGGAGTATTTGT+TGG 0.371935 5_1:+70824775 Msa0747180:CDS
TTCATCAGCCAATACAATTT+GGG 0.375471 5_1:-70824431 None:intergenic
TCAAATAACCATTGAAAAGA+AGG 0.380370 5_1:-70824859 None:intergenic
GGTGAATGATATCGTGCAAC+AGG 0.381657 5_1:+70824012 Msa0747180:CDS
TCACCATTCATCACCACCTC+TGG 0.385515 5_1:+70823796 Msa0747180:CDS
CCCACCCATTGCTTTGAGAA+AGG 0.392844 5_1:-70824884 None:intergenic
ATGAGACTCTTCATAAACTT+TGG 0.394637 5_1:-70825873 None:intergenic
ATTTCACTTGATCGGAAGAT+TGG 0.399360 5_1:+70824301 Msa0747180:CDS
GTCATGCCAGAAACATTTCA+TGG 0.400517 5_1:+70824967 Msa0747180:CDS
GACACCGCGTCTACCCTCTT+TGG 0.402002 5_1:-70824209 None:intergenic
CATCCCAACCTTGCATCTCT+TGG 0.405348 5_1:-70825714 None:intergenic
CACAAATGATAAATGATTAT+GGG 0.407470 5_1:+70824698 Msa0747180:CDS
ATAGATGATTCACATGCCTT+AGG 0.411459 5_1:-70825020 None:intergenic
TAATGTACCACACTTGGAAA+TGG 0.430430 5_1:+70824054 Msa0747180:CDS
TCCAAGCATGTATGCCATCA+TGG 0.434387 5_1:-70826458 None:intergenic
ATATGGAAGCCATGCTTTGA+TGG 0.436030 5_1:+70826497 Msa0747180:CDS
TACACCTTCAACCATTGGAT+TGG 0.436578 5_1:-70823981 None:intergenic
AATGGAAGCCAATCTGGATA+TGG 0.437868 5_1:+70826480 Msa0747180:CDS
ATCATTTATCATTTGTGCAT+CGG 0.444064 5_1:-70824692 None:intergenic
ACGTGTGTCGTTTCTACCAT+TGG 0.448381 5_1:-70823755 None:intergenic
TGTTTAAGAAATTTGAAAGA+AGG 0.449252 5_1:+70825504 Msa0747180:CDS
TCCAATTTCTCAAGCCAAGT+TGG 0.453093 5_1:-70826073 None:intergenic
TAGATGATTCACATGCCTTA+GGG 0.455627 5_1:-70825019 None:intergenic
GAAACCTTTCTCAAAGCAAT+GGG 0.457265 5_1:+70824880 Msa0747180:CDS
TGTGTACCATCATTGTTTGC+AGG 0.460822 5_1:-70826248 None:intergenic
AGAGCCGAGATTGCTTAGAT+AGG 0.461774 5_1:+70826035 Msa0747180:CDS
CATGGCTTCCATATCCAGAT+TGG 0.462462 5_1:-70826488 None:intergenic
AACAGGATGTTTAGCACGTA+TGG 0.468473 5_1:+70824276 Msa0747180:CDS
TGCATCTTGATCTGTTAGAA+TGG 0.469730 5_1:-70824920 None:intergenic
GGAGTTTGAGTCTGAGGCCT+TGG 0.475074 5_1:+70824075 Msa0747180:CDS
TGAAACCTTTCTCAAAGCAA+TGG 0.476564 5_1:+70824879 Msa0747180:CDS
ATGGAAGTCTACATGAGATT+AGG 0.477147 5_1:+70826571 Msa0747180:CDS
GTTTAAGAAATTTGAAAGAA+GGG 0.482494 5_1:+70825505 Msa0747180:CDS
ATAAATGATTATGGGTACTT+TGG 0.482723 5_1:+70824706 Msa0747180:CDS
GGAATTCCAAGATGAATATG+AGG 0.483458 5_1:+70825467 Msa0747180:CDS
AATAAGAATTATCGTCCGTT+GGG 0.484650 5_1:+70824763 Msa0747180:CDS
TCCAAATGTCAAATGAGATT+AGG 0.485144 5_1:+70826595 Msa0747180:CDS
CCCATGATGGCATACATGCT+TGG 0.488076 5_1:+70826457 Msa0747180:CDS
GTGGACACTGTTGATCTTGG+TGG 0.493561 5_1:+70825998 Msa0747180:CDS
CAAATAACCATTGAAAAGAA+GGG 0.495588 5_1:-70824858 None:intergenic
ACAAGCATCCCAAATTGTAT+TGG 0.495869 5_1:+70824423 Msa0747180:CDS
TCACTAAGGTATGGTGAAGT+AGG 0.507546 5_1:+70824571 Msa0747180:CDS
TCTATGGATGGAGAGTCAAT+TGG 0.511024 5_1:+70825926 Msa0747180:CDS
TGGCCAAGAGATGCAAGGTT+GGG 0.516109 5_1:+70825711 Msa0747180:CDS
GATGGTACACATGCTTTGAA+TGG 0.516924 5_1:+70826260 Msa0747180:CDS
TTGCCGGCTTGTACAAGCAT+AGG 0.519591 5_1:-70825420 None:intergenic
ATCCCTATGCTTGTACAAGC+CGG 0.521377 5_1:+70825417 Msa0747180:CDS
ATTGTGCACTTGGCATATAA+GGG 0.522000 5_1:+70824990 Msa0747180:CDS
ATCATATAAACATACTCAGC+TGG 0.522562 5_1:-70824373 None:intergenic
GATAGTAGTAGCGAATCATA+TGG 0.523742 5_1:+70825566 Msa0747180:CDS
CATACTCAGCTGGCAGAAGA+AGG 0.525063 5_1:-70824363 None:intergenic
AAATAAGAATTATCGTCCGT+TGG 0.526037 5_1:+70824762 Msa0747180:CDS
TGAAACTCATAAAAGAATGA+AGG 0.528219 5_1:-70824631 None:intergenic
CACCATTCATCACCACCTCT+GGG 0.529997 5_1:+70823797 Msa0747180:CDS
TAGTCCTATCTAAGCAATCT+CGG 0.530700 5_1:-70826039 None:intergenic
ACATCCAATCCAATGGTTGA+AGG 0.531051 5_1:+70823977 Msa0747180:CDS
GTATGGTTATTTCACTTGAT+CGG 0.532614 5_1:+70824293 Msa0747180:CDS
GCTCGAGCAGAAACTAGAAC+AGG 0.536024 5_1:+70824259 Msa0747180:CDS
TTGGCCAAGAGATGCAAGGT+TGG 0.536626 5_1:+70825710 Msa0747180:CDS
AATGTGGACACTGTTGATCT+TGG 0.536764 5_1:+70825995 Msa0747180:CDS
CAATCTCCTGCAAACAATGA+TGG 0.539918 5_1:+70826242 Msa0747180:CDS
TGTATGCCATCATGGGTTGC+TGG 0.540590 5_1:-70826450 None:intergenic
TCAAGATGCAGCAATGGCTA+AGG 0.541612 5_1:+70824933 Msa0747180:CDS
ACGTGATTACTTAACAAAAG+AGG 0.543276 5_1:+70824237 Msa0747180:CDS
CTAAAAGGAACCACTCACTA+AGG 0.543419 5_1:+70824557 Msa0747180:CDS
CAATCTCCAGCAACCCATGA+TGG 0.544924 5_1:+70826444 Msa0747180:CDS
TGCCCAGAGGTGGTGATGAA+TGG 0.545146 5_1:-70823799 None:intergenic
GTACACATGCTTTGAATGGA+AGG 0.545764 5_1:+70826264 Msa0747180:CDS
CAGACAAACAATTGTTTATG+GGG 0.545894 5_1:+70824810 Msa0747180:CDS
ATAATGTTTCTAAAGACTCA+TGG 0.548211 5_1:+70825145 Msa0747180:CDS
CCAAGCATGTATGCCATCAT+GGG 0.548509 5_1:-70826457 None:intergenic
GGAAATGGAGTTTGAGTCTG+AGG 0.549669 5_1:+70824069 Msa0747180:CDS
AATGAGTATAGTAGGAAATG+TGG 0.549866 5_1:+70824112 Msa0747180:CDS
ACCTTTCTCAAAGCAATGGG+TGG 0.552305 5_1:+70824883 Msa0747180:CDS
TCGGAAGATTGGAAAATACA+AGG 0.556421 5_1:+70824312 Msa0747180:CDS
TGGACACTGTTGATCTTGGT+GGG 0.560318 5_1:+70825999 Msa0747180:CDS
TGTTAGTAATGTACCACACT+TGG 0.560348 5_1:+70824048 Msa0747180:CDS
ATCTTACCGGTGCCCAGAGG+TGG 0.565589 5_1:-70823809 None:intergenic
ATTATAAAATTCATATGCCA+AGG 0.568982 5_1:-70824092 None:intergenic
AGCAATATATACTAAAACGT+TGG 0.571514 5_1:+70825691 Msa0747180:CDS
AACAGATCAAGATGCAGCAA+TGG 0.573110 5_1:+70824927 Msa0747180:CDS
ATTCTTATTTGTCTTGAATG+TGG 0.574010 5_1:-70824749 None:intergenic
TGCCGGCTTGTACAAGCATA+GGG 0.574909 5_1:-70825419 None:intergenic
AGGAACCACTCACTAAGGTA+TGG 0.576328 5_1:+70824562 Msa0747180:CDS
GTGCGAAAGACTTTCACTGC+AGG 0.578283 5_1:+70825213 Msa0747180:CDS
TGTCGAAAGTTTGAGACACA+TGG 0.578537 5_1:+70825609 Msa0747180:CDS
TTTGAGATGCCATCAAAGCA+TGG 0.583887 5_1:-70826506 None:intergenic
CATAAACAATTGTTTGTCTG+TGG 0.584673 5_1:-70824807 None:intergenic
AAAGAGTTGTCAACGGAAAG+CGG 0.589356 5_1:+70825331 Msa0747180:CDS
AAAATTTGTGTGCTCCAAAG+AGG 0.589431 5_1:+70824195 Msa0747180:CDS
TCATCACCACCTCTGGGCAC+CGG 0.597509 5_1:+70823803 Msa0747180:CDS
GATGGCATACATGCTTGGAA+TGG 0.609086 5_1:+70826462 Msa0747180:CDS
CACTTTGAAAGAGTTGTCAA+CGG 0.610932 5_1:+70825324 Msa0747180:CDS
CCTTTAACAGAAGCTGACAA+TGG 0.612454 5_1:+70826552 Msa0747180:CDS
CCTTTCTCAAAGCAATGGGT+GGG 0.612770 5_1:+70824884 Msa0747180:CDS
ATGCATTGATCTACACGAAG+AGG 0.614015 5_1:+70825080 Msa0747180:CDS
GAATATTACATCCAATCCAA+TGG 0.614280 5_1:+70823970 Msa0747180:CDS
AAATTTGTGTGCTCCAAAGA+GGG 0.614397 5_1:+70824196 Msa0747180:CDS
GAATTTGTGTCAAAACAAGC+TGG 0.617409 5_1:+70824481 Msa0747180:CDS
AACGTTGGCCAAGAGATGCA+AGG 0.619456 5_1:+70825706 Msa0747180:CDS
CAAGGTTATTGACTTTGTAG+CGG 0.620198 5_1:+70824330 Msa0747180:CDS
CTTCACCATACCTTAGTGAG+TGG 0.628280 5_1:-70824567 None:intergenic
TACAAATTATGATAACAGCA+AGG 0.637062 5_1:+70825539 Msa0747180:CDS
GCTGGTGGAATAAACACTGT+TGG 0.638577 5_1:+70824499 Msa0747180:CDS
TCAAACTCCATTTCCAAGTG+TGG 0.642402 5_1:-70824061 None:intergenic
ATATAAGGGAAAATGCCCTA+AGG 0.647376 5_1:+70825004 Msa0747180:CDS
TTTGTGTCAAAACAAGCTGG+TGG 0.647892 5_1:+70824484 Msa0747180:CDS
AGGCCAACAAATACTCCCAA+CGG 0.650363 5_1:-70824778 None:intergenic
TGCTCCAAAGAGGGTAGACG+CGG 0.660484 5_1:+70824205 Msa0747180:CDS
GTGAATGATATCGTGCAACA+GGG 0.667513 5_1:+70824013 Msa0747180:CDS
GGACACTGTTGATCTTGGTG+GGG 0.681245 5_1:+70826000 Msa0747180:CDS
ATTATGATAACAGCAAGGAG+CGG 0.694152 5_1:+70825544 Msa0747180:CDS
AAAATCTTACCGGTGCCCAG+AGG 0.742952 5_1:-70823812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATAATGAGTATAGT+AGG + chr5_1:70824104-70824123 Msa0747180:CDS 15.0%
!!! CATGAATATTTGAAAGTATT+TGG + chr5_1:70823866-70823885 Msa0747180:intron 20.0%
!! TATTCACATTATCTAGAAAA+TGG - chr5_1:70823955-70823974 None:intergenic 20.0%
!! ATTATAAAATTCATATGCCA+AGG - chr5_1:70824095-70824114 None:intergenic 20.0%
!!! ACAAATTCATGAAAATCTTT+TGG - chr5_1:70824469-70824488 None:intergenic 20.0%
!!! AGCAAATAACAAACATATTT+TGG + chr5_1:70824668-70824687 Msa0747180:CDS 20.0%
!!! GCAAATAACAAACATATTTT+GGG + chr5_1:70824669-70824688 Msa0747180:CDS 20.0%
!! CACAAATGATAAATGATTAT+GGG + chr5_1:70824698-70824717 Msa0747180:CDS 20.0%
!!! ATCTTTTTCATTTTCAATCT+TGG - chr5_1:70825399-70825418 None:intergenic 20.0%
!! TGTTTAAGAAATTTGAAAGA+AGG + chr5_1:70825504-70825523 Msa0747180:CDS 20.0%
!! GTTTAAGAAATTTGAAAGAA+GGG + chr5_1:70825505-70825524 Msa0747180:CDS 20.0%
!! ATCAATTGCAAATGAAAAAA+AGG + chr5_1:70825967-70825986 Msa0747180:CDS 20.0%
!!! TATTACTTTTACTACTATGT+AGG + chr5_1:70826217-70826236 Msa0747180:intron 20.0%
!!! TTTTATTTGCATATTCTCGA+CGG - chr5_1:70824147-70824166 None:intergenic 25.0%
! GCAAATAAAAGCAAAAAAGA+TGG + chr5_1:70824157-70824176 Msa0747180:CDS 25.0%
! TGAAACTCATAAAAGAATGA+AGG - chr5_1:70824634-70824653 None:intergenic 25.0%
!! ATTCTTTTATGAGTTTCAGA+TGG + chr5_1:70824636-70824655 Msa0747180:CDS 25.0%
! ATCATTTATCATTTGTGCAT+CGG - chr5_1:70824695-70824714 None:intergenic 25.0%
! GCACAAATGATAAATGATTA+TGG + chr5_1:70824697-70824716 Msa0747180:CDS 25.0%
! ATAAATGATTATGGGTACTT+TGG + chr5_1:70824706-70824725 Msa0747180:CDS 25.0%
!! ATTCTTATTTGTCTTGAATG+TGG - chr5_1:70824752-70824771 None:intergenic 25.0%
! ACAGACAAACAATTGTTTAT+GGG + chr5_1:70824809-70824828 Msa0747180:CDS 25.0%
! CAAATAACCATTGAAAAGAA+GGG - chr5_1:70824861-70824880 None:intergenic 25.0%
! TCAAATAACCATTGAAAAGA+AGG - chr5_1:70824862-70824881 None:intergenic 25.0%
!! ATAATGTTTCTAAAGACTCA+TGG + chr5_1:70825145-70825164 Msa0747180:CDS 25.0%
! CCTTGAATCGAAAAATATTA+TGG - chr5_1:70825173-70825192 None:intergenic 25.0%
!!! CCATAATATTTTTCGATTCA+AGG + chr5_1:70825170-70825189 Msa0747180:CDS 25.0%
!!! TTTTTCGATTCAAGGAAAAA+TGG + chr5_1:70825178-70825197 Msa0747180:CDS 25.0%
!! TTTTCGATTCAAGGAAAAAT+GGG + chr5_1:70825179-70825198 Msa0747180:CDS 25.0%
!! TTACACTACAAGAATTTTTG+AGG + chr5_1:70825446-70825465 Msa0747180:CDS 25.0%
! TACAAATTATGATAACAGCA+AGG + chr5_1:70825539-70825558 Msa0747180:CDS 25.0%
! AGCAATATATACTAAAACGT+TGG + chr5_1:70825691-70825710 Msa0747180:CDS 25.0%
! GATGTAATCAAAATTGGAAA+GGG + chr5_1:70825733-70825752 Msa0747180:intron 25.0%
! TGGATAAAAAGAGACAAAAA+AGG + chr5_1:70826092-70826111 Msa0747180:CDS 25.0%
! GACTAAGAGAAAGAAAAAAT+TGG + chr5_1:70826123-70826142 Msa0747180:CDS 25.0%
! AAGGAAGAGAAAGAAAAAAT+TGG + chr5_1:70826283-70826302 Msa0747180:CDS 25.0%
! CACATGTTAAAAAGAAAGTA+TGG - chr5_1:70826158-70826177 None:intergenic 25.0%
!! TGTTACTTCTACTATTATGT+AGG + chr5_1:70826419-70826438 Msa0747180:intron 25.0%
GACAAAGAACAAAATCTTAC+CGG - chr5_1:70823825-70823844 None:intergenic 30.0%
GAATATTACATCCAATCCAA+TGG + chr5_1:70823970-70823989 Msa0747180:CDS 30.0%
AATGAGTATAGTAGGAAATG+TGG + chr5_1:70824112-70824131 Msa0747180:CDS 30.0%
! TATAGTAGGAAATGTGGTTT+TGG + chr5_1:70824118-70824137 Msa0747180:CDS 30.0%
ACGTGATTACTTAACAAAAG+AGG + chr5_1:70824237-70824256 Msa0747180:CDS 30.0%
! GTATGGTTATTTCACTTGAT+CGG + chr5_1:70824293-70824312 Msa0747180:CDS 30.0%
ATCATATAAACATACTCAGC+TGG - chr5_1:70824376-70824395 None:intergenic 30.0%
TTCATCAGCCAATACAATTT+GGG - chr5_1:70824434-70824453 None:intergenic 30.0%
ATTCATCAGCCAATACAATT+TGG - chr5_1:70824435-70824454 None:intergenic 30.0%
AAATAAGAATTATCGTCCGT+TGG + chr5_1:70824762-70824781 Msa0747180:CDS 30.0%
AATAAGAATTATCGTCCGTT+GGG + chr5_1:70824763-70824782 Msa0747180:CDS 30.0%
CATAAACAATTGTTTGTCTG+TGG - chr5_1:70824810-70824829 None:intergenic 30.0%
CACAGACAAACAATTGTTTA+TGG + chr5_1:70824808-70824827 Msa0747180:CDS 30.0%
CAGACAAACAATTGTTTATG+GGG + chr5_1:70824810-70824829 Msa0747180:CDS 30.0%
! AAACAATCCCTTCTTTTCAA+TGG + chr5_1:70824851-70824870 Msa0747180:CDS 30.0%
! TGATCTGTTAGAATGGTTTT+AGG - chr5_1:70824916-70824935 None:intergenic 30.0%
!!! AAGAAGAATTTTTGAGTGGA+TGG + chr5_1:70825103-70825122 Msa0747180:CDS 30.0%
!!! AGAAGAATTTTTGAGTGGAT+GGG + chr5_1:70825104-70825123 Msa0747180:CDS 30.0%
!! CGTTTTAGTATATATTGCTG+AGG - chr5_1:70825690-70825709 None:intergenic 30.0%
GGATGTAATCAAAATTGGAA+AGG + chr5_1:70825732-70825751 Msa0747180:intron 30.0%
ATGAGACTCTTCATAAACTT+TGG - chr5_1:70825876-70825895 None:intergenic 30.0%
! TATGCTGACTAAAAAGTCTA+TGG + chr5_1:70825910-70825929 Msa0747180:CDS 30.0%
TGAAAAAAAGGATCAGAATG+TGG + chr5_1:70825979-70825998 Msa0747180:CDS 30.0%
GCTTAGATAGGACTAAAAAA+AGG + chr5_1:70826047-70826066 Msa0747180:CDS 30.0%
GATAGCAGTACTAAAATTCT+AGG - chr5_1:70826181-70826200 None:intergenic 30.0%
TCCAAATGTCAAATGAGATT+AGG + chr5_1:70826595-70826614 Msa0747180:CDS 30.0%
TCCTAATCTCATTTGACATT+TGG - chr5_1:70826599-70826618 None:intergenic 30.0%
! TTTTCTACACCTTCAACCAT+TGG - chr5_1:70823989-70824008 None:intergenic 35.0%
! GGTTGAAGGTGTAGAAAAAT+TGG + chr5_1:70823991-70824010 Msa0747180:CDS 35.0%
TGTTAGTAATGTACCACACT+TGG + chr5_1:70824048-70824067 Msa0747180:CDS 35.0%
TAATGTACCACACTTGGAAA+TGG + chr5_1:70824054-70824073 Msa0747180:CDS 35.0%
AAAATTTGTGTGCTCCAAAG+AGG + chr5_1:70824195-70824214 Msa0747180:CDS 35.0%
AAATTTGTGTGCTCCAAAGA+GGG + chr5_1:70824196-70824215 Msa0747180:CDS 35.0%
ATTTCACTTGATCGGAAGAT+TGG + chr5_1:70824301-70824320 Msa0747180:CDS 35.0%
TCGGAAGATTGGAAAATACA+AGG + chr5_1:70824312-70824331 Msa0747180:CDS 35.0%
!! CAAGGTTATTGACTTTGTAG+CGG + chr5_1:70824330-70824349 Msa0747180:CDS 35.0%
ACAAGCATCCCAAATTGTAT+TGG + chr5_1:70824423-70824442 Msa0747180:CDS 35.0%
!! ATTGTATTGGCTGATGAATC+TGG + chr5_1:70824436-70824455 Msa0747180:CDS 35.0%
GAATTTGTGTCAAAACAAGC+TGG + chr5_1:70824481-70824500 Msa0747180:CDS 35.0%
TAGTGCGAAGCAAATTTCTA+TGG - chr5_1:70824540-70824559 None:intergenic 35.0%
! GAAATTTGCTTCGCACTAAA+AGG + chr5_1:70824542-70824561 Msa0747180:CDS 35.0%
TTGTTTGTCTGTGGCTATTA+AGG - chr5_1:70824801-70824820 None:intergenic 35.0%
TGAAACCTTTCTCAAAGCAA+TGG + chr5_1:70824879-70824898 Msa0747180:CDS 35.0%
GAAACCTTTCTCAAAGCAAT+GGG + chr5_1:70824880-70824899 Msa0747180:CDS 35.0%
TGCATCTTGATCTGTTAGAA+TGG - chr5_1:70824923-70824942 None:intergenic 35.0%
CACAATCCATGAAATGTTTC+TGG - chr5_1:70824976-70824995 None:intergenic 35.0%
ATTGTGCACTTGGCATATAA+GGG + chr5_1:70824990-70825009 Msa0747180:CDS 35.0%
ATATAAGGGAAAATGCCCTA+AGG + chr5_1:70825004-70825023 Msa0747180:CDS 35.0%
TAGATGATTCACATGCCTTA+GGG - chr5_1:70825022-70825041 None:intergenic 35.0%
ATAGATGATTCACATGCCTT+AGG - chr5_1:70825023-70825042 None:intergenic 35.0%
!! GAGGAAGAAGAATTTTTGAG+TGG + chr5_1:70825099-70825118 Msa0747180:CDS 35.0%
ATTCAAGGAAAAATGGGCAT+GGG + chr5_1:70825185-70825204 Msa0747180:CDS 35.0%
! CACTTTGAAAGAGTTGTCAA+CGG + chr5_1:70825324-70825343 Msa0747180:CDS 35.0%
TCTTGTAGTGTAAACATTGC+CGG - chr5_1:70825439-70825458 None:intergenic 35.0%
GGAATTCCAAGATGAATATG+AGG + chr5_1:70825467-70825486 Msa0747180:CDS 35.0%
GACATTCCTCATATTCATCT+TGG - chr5_1:70825476-70825495 None:intergenic 35.0%
ATTATGATAACAGCAAGGAG+CGG + chr5_1:70825544-70825563 Msa0747180:CDS 35.0%
GATAGTAGTAGCGAATCATA+TGG + chr5_1:70825566-70825585 Msa0747180:CDS 35.0%
GGTTGGGATGTAATCAAAAT+TGG + chr5_1:70825727-70825746 Msa0747180:intron 35.0%
GGAAAGGGAACATATTGAAT+TGG + chr5_1:70825748-70825767 Msa0747180:intron 35.0%
TTGCTCAATTTAACTGCTTG+AGG - chr5_1:70825815-70825834 None:intergenic 35.0%
CTGACTAAAAAGTCTATGGA+TGG + chr5_1:70825914-70825933 Msa0747180:CDS 35.0%
TAGTCCTATCTAAGCAATCT+CGG - chr5_1:70826042-70826061 None:intergenic 35.0%
!! CTAAAAAAAGGCATCCAACT+TGG + chr5_1:70826059-70826078 Msa0747180:CDS 35.0%
ATGGAAGTCTACATGAGATT+AGG + chr5_1:70826571-70826590 Msa0747180:CDS 35.0%
ACATCCAATCCAATGGTTGA+AGG + chr5_1:70823977-70823996 Msa0747180:CDS 40.0%
TACACCTTCAACCATTGGAT+TGG - chr5_1:70823984-70824003 None:intergenic 40.0%
GTGAATGATATCGTGCAACA+GGG + chr5_1:70824013-70824032 Msa0747180:CDS 40.0%
TCAAACTCCATTTCCAAGTG+TGG - chr5_1:70824064-70824083 None:intergenic 40.0%
AACAGGATGTTTAGCACGTA+TGG + chr5_1:70824276-70824295 Msa0747180:CDS 40.0%
TTTGTGTCAAAACAAGCTGG+TGG + chr5_1:70824484-70824503 Msa0747180:CDS 40.0%
CTAAAAGGAACCACTCACTA+AGG + chr5_1:70824557-70824576 Msa0747180:CDS 40.0%
TCACTAAGGTATGGTGAAGT+AGG + chr5_1:70824571-70824590 Msa0747180:CDS 40.0%
AACAGATCAAGATGCAGCAA+TGG + chr5_1:70824927-70824946 Msa0747180:CDS 40.0%
GTCATGCCAGAAACATTTCA+TGG + chr5_1:70824967-70824986 Msa0747180:CDS 40.0%
! CATTTCATGGATTGTGCACT+TGG + chr5_1:70824980-70824999 Msa0747180:CDS 40.0%
GATTGTGCACTTGGCATATA+AGG + chr5_1:70824989-70825008 Msa0747180:CDS 40.0%
! ATGCATTGATCTACACGAAG+AGG + chr5_1:70825080-70825099 Msa0747180:CDS 40.0%
!!! AGAATTTTTGAGTGGATGGG+AGG + chr5_1:70825107-70825126 Msa0747180:CDS 40.0%
GATTCAAGGAAAAATGGGCA+TGG + chr5_1:70825184-70825203 Msa0747180:CDS 40.0%
AAAGAGTTGTCAACGGAAAG+CGG + chr5_1:70825331-70825350 Msa0747180:CDS 40.0%
! TGTCGAAAGTTTGAGACACA+TGG + chr5_1:70825609-70825628 Msa0747180:CDS 40.0%
TCTATGGATGGAGAGTCAAT+TGG + chr5_1:70825926-70825945 Msa0747180:CDS 40.0%
AATGTGGACACTGTTGATCT+TGG + chr5_1:70825995-70826014 Msa0747180:CDS 40.0%
! TCCAACTTGGCTTGAGAAAT+TGG + chr5_1:70826072-70826091 Msa0747180:CDS 40.0%
TCCAATTTCTCAAGCCAAGT+TGG - chr5_1:70826076-70826095 None:intergenic 40.0%
CAATCTCCTGCAAACAATGA+TGG + chr5_1:70826242-70826261 Msa0747180:CDS 40.0%
TGTGTACCATCATTGTTTGC+AGG - chr5_1:70826251-70826270 None:intergenic 40.0%
! GATGGTACACATGCTTTGAA+TGG + chr5_1:70826260-70826279 Msa0747180:CDS 40.0%
! GTACACATGCTTTGAATGGA+AGG + chr5_1:70826264-70826283 Msa0747180:CDS 40.0%
AATGGAAGCCAATCTGGATA+TGG + chr5_1:70826480-70826499 Msa0747180:CDS 40.0%
ATATGGAAGCCATGCTTTGA+TGG + chr5_1:70826497-70826516 Msa0747180:CDS 40.0%
! TTTGAGATGCCATCAAAGCA+TGG - chr5_1:70826509-70826528 None:intergenic 40.0%
CCATTGTCAGCTTCTGTTAA+AGG - chr5_1:70826555-70826574 None:intergenic 40.0%
CCTTTAACAGAAGCTGACAA+TGG + chr5_1:70826552-70826571 Msa0747180:CDS 40.0%
GGTGAATGATATCGTGCAAC+AGG + chr5_1:70824012-70824031 Msa0747180:CDS 45.0%
GGAAATGGAGTTTGAGTCTG+AGG + chr5_1:70824069-70824088 Msa0747180:CDS 45.0%
GCTGGTGGAATAAACACTGT+TGG + chr5_1:70824499-70824518 Msa0747180:CDS 45.0%
AGGAACCACTCACTAAGGTA+TGG + chr5_1:70824562-70824581 Msa0747180:CDS 45.0%
CTTCACCATACCTTAGTGAG+TGG - chr5_1:70824570-70824589 None:intergenic 45.0%
AGGCCAACAAATACTCCCAA+CGG - chr5_1:70824781-70824800 None:intergenic 45.0%
ACCTTTCTCAAAGCAATGGG+TGG + chr5_1:70824883-70824902 Msa0747180:CDS 45.0%
CCTTTCTCAAAGCAATGGGT+GGG + chr5_1:70824884-70824903 Msa0747180:CDS 45.0%
TCAAGATGCAGCAATGGCTA+AGG + chr5_1:70824933-70824952 Msa0747180:CDS 45.0%
ATCCCTATGCTTGTACAAGC+CGG + chr5_1:70825417-70825436 Msa0747180:CDS 45.0%
TGGACACTGTTGATCTTGGT+GGG + chr5_1:70825999-70826018 Msa0747180:CDS 45.0%
AGAGCCGAGATTGCTTAGAT+AGG + chr5_1:70826035-70826054 Msa0747180:CDS 45.0%
CCAAGCATGTATGCCATCAT+GGG - chr5_1:70826460-70826479 None:intergenic 45.0%
TCCAAGCATGTATGCCATCA+TGG - chr5_1:70826461-70826480 None:intergenic 45.0%
GATGGCATACATGCTTGGAA+TGG + chr5_1:70826462-70826481 Msa0747180:CDS 45.0%
CATGGCTTCCATATCCAGAT+TGG - chr5_1:70826491-70826510 None:intergenic 45.0%
TCACCATTCATCACCACCTC+TGG + chr5_1:70823796-70823815 Msa0747180:CDS 50.0%
CACCATTCATCACCACCTCT+GGG + chr5_1:70823797-70823816 Msa0747180:CDS 50.0%
AAAATCTTACCGGTGCCCAG+AGG - chr5_1:70823815-70823834 None:intergenic 50.0%
GCTCGAGCAGAAACTAGAAC+AGG + chr5_1:70824259-70824278 Msa0747180:CDS 50.0%
CATACTCAGCTGGCAGAAGA+AGG - chr5_1:70824366-70824385 None:intergenic 50.0%
!! CGTCCGTTGGGAGTATTTGT+TGG + chr5_1:70824775-70824794 Msa0747180:CDS 50.0%
!! CCCACCCATTGCTTTGAGAA+AGG - chr5_1:70824887-70824906 None:intergenic 50.0%
GTGCGAAAGACTTTCACTGC+AGG + chr5_1:70825213-70825232 Msa0747180:CDS 50.0%
!! TGCCGGCTTGTACAAGCATA+GGG - chr5_1:70825422-70825441 None:intergenic 50.0%
!! TTGCCGGCTTGTACAAGCAT+AGG - chr5_1:70825423-70825442 None:intergenic 50.0%
AACGTTGGCCAAGAGATGCA+AGG + chr5_1:70825706-70825725 Msa0747180:CDS 50.0%
TTGGCCAAGAGATGCAAGGT+TGG + chr5_1:70825710-70825729 Msa0747180:CDS 50.0%
TGGCCAAGAGATGCAAGGTT+GGG + chr5_1:70825711-70825730 Msa0747180:CDS 50.0%
CATCCCAACCTTGCATCTCT+TGG - chr5_1:70825717-70825736 None:intergenic 50.0%
GTGGACACTGTTGATCTTGG+TGG + chr5_1:70825998-70826017 Msa0747180:CDS 50.0%
GGACACTGTTGATCTTGGTG+GGG + chr5_1:70826000-70826019 Msa0747180:CDS 50.0%
CAATCTCCAGCAACCCATGA+TGG + chr5_1:70826444-70826463 Msa0747180:CDS 50.0%
! TGTATGCCATCATGGGTTGC+TGG - chr5_1:70826453-70826472 None:intergenic 50.0%
CCCATGATGGCATACATGCT+TGG + chr5_1:70826457-70826476 Msa0747180:CDS 50.0%
GCTTGGAATGGAAGCCAATC+TGG + chr5_1:70826474-70826493 Msa0747180:CDS 50.0%
! TGCCCAGAGGTGGTGATGAA+TGG - chr5_1:70823802-70823821 None:intergenic 55.0%
! GGAGTTTGAGTCTGAGGCCT+TGG + chr5_1:70824075-70824094 Msa0747180:CDS 55.0%
TGCTCCAAAGAGGGTAGACG+CGG + chr5_1:70824205-70824224 Msa0747180:CDS 55.0%
TCATCACCACCTCTGGGCAC+CGG + chr5_1:70823803-70823822 Msa0747180:CDS 60.0%
ATCTTACCGGTGCCCAGAGG+TGG - chr5_1:70823812-70823831 None:intergenic 60.0%
GACACCGCGTCTACCCTCTT+TGG - chr5_1:70824212-70824231 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 70823758 70826623 70823758 ID=Msa0747180;Name=Msa0747180
chr5_1 mRNA 70823758 70826623 70823758 ID=Msa0747180-mRNA-1;Parent=Msa0747180;Name=Msa0747180-mRNA-1;_AED=0.24;_eAED=0.32;_QI=0|0|0|0.8|1|1|5|0|803
chr5_1 exon 70823758 70823824 70823758 ID=Msa0747180-mRNA-1:exon:20890;Parent=Msa0747180-mRNA-1
chr5_1 exon 70823963 70825735 70823963 ID=Msa0747180-mRNA-1:exon:20891;Parent=Msa0747180-mRNA-1
chr5_1 exon 70825822 70826144 70825822 ID=Msa0747180-mRNA-1:exon:20892;Parent=Msa0747180-mRNA-1
chr5_1 exon 70826239 70826304 70826239 ID=Msa0747180-mRNA-1:exon:20893;Parent=Msa0747180-mRNA-1
chr5_1 exon 70826441 70826623 70826441 ID=Msa0747180-mRNA-1:exon:20894;Parent=Msa0747180-mRNA-1
chr5_1 CDS 70823758 70823824 70823758 ID=Msa0747180-mRNA-1:cds;Parent=Msa0747180-mRNA-1
chr5_1 CDS 70823963 70825735 70823963 ID=Msa0747180-mRNA-1:cds;Parent=Msa0747180-mRNA-1
chr5_1 CDS 70825822 70826144 70825822 ID=Msa0747180-mRNA-1:cds;Parent=Msa0747180-mRNA-1
chr5_1 CDS 70826239 70826304 70826239 ID=Msa0747180-mRNA-1:cds;Parent=Msa0747180-mRNA-1
chr5_1 CDS 70826441 70826623 70826441 ID=Msa0747180-mRNA-1:cds;Parent=Msa0747180-mRNA-1
Gene Sequence

>Msa0747180

ATGGTAGAAACGACACACGTAGAACATGATGCAAATCTTCACCATTCATCACCACCTCTGGGCACCGATAATGTGAATATTACATCCAATCCAATGGTTGAAGGTGTAGAAAAATTGGTGAATGATATCGTGCAACAGGGAAAAGAGAGTACTGTTAGTAATGTACCACACTTGGAAATGGAGTTTGAGTCTGAGGCCTTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTTGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAAAATTTGTGTGCTCCAAAGAGGGTAGACGCGGTGTCGACAAACGTGATTACTTAACAAAAGAGGCTCGAGCAGAAACTAGAACAGGATGTTTAGCACGTATGGTTATTTCACTTGATCGGAAGATTGGAAAATACAAGGTTATTGACTTTGTAGCGGAACATAATCACCTTCTTCTGCCAGCTGAGTATGTTTATATGATTCGCTCTCATCGACACATATCTGAGTCACAAGCATCCCAAATTGTATTGGCTGATGAATCTGGATTGAAACCAAAAGATTTTCATGAATTTGTGTCAAAACAAGCTGGTGGAATAAACACTGTTGGTTACACAAGACAAGACCATAGAAATTTGCTTCGCACTAAAAGGAACCACTCACTAAGGTATGGTGAAGTAGGTGCATTACTAATACATTTCAAAAAGCAAAGTGAAAATCCTTCATTCTTTTATGAGTTTCAGATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCCGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTTGTCATTTTTGACACCACATTCAAGACAAATAAGAATTATCGTCCGTTGGGAGTATTTGTTGGCCTTAATAGCCACAGACAAACAATTGTTTATGGGGCAGCATTGTTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACCTTTCTCAAAGCAATGGGTGGGAAAAAGCCTAAAACCATTCTAACAGATCAAGATGCAGCAATGGCTAAGGCTCTTTCTATAGTCATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGGGAAAATGCCCTAAGGCATGTGAATCATCTATATCAACAGAGCTCACAATTCTGCTCAGATTTTGAAGCATGCATTGATCTACACGAAGAGGAAGAAGAATTTTTGAGTGGATGGGAGGCTTTACTAGTTGAGCATAATGTTTCTAAAGACTCATGGCTCCATAATATTTTTCGATTCAAGGAAAAATGGGCATGGGCTTATGTGCGAAAGACTTTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGTTTTAATGCTGATTTAAAAAATCATTTGAAGTCAGATTTAAATTTGATACAATTTTTCACACACTTTGAAAGAGTTGTCAACGGAAAGCGGAATAATGAGTCAGAAGCTGAATATGAGTCGAGACAAAAGTTGCCAAGATTGAAAATGAAAAAGATCCCTATGCTTGTACAAGCCGGCAATGTTTACACTACAAGAATTTTTGAGGAATTCCAAGATGAATATGAGGAATGTCAAGCTTCTTGTTTAAGAAATTTGAAAGAAGGGTCATATGTTGTTACAAATTATGATAACAGCAAGGAGCGGATAGTAGTAGCGAATCATATGGATAAAACAGTTGCTTGTGATTGTCGAAAGTTTGAGACACATGGAATCTTATGCAGTCATGCTTTGAAAGTTTTAGATTTTATGAATGTTAAGCTAATTCCTCAGCAATATATACTAAAACGTTGGCCAAGAGATGCAAGGTTGGGATTTAAATTGAGCAATAGAGCATCAGAATCTCATGAAACTTACACATTTTTGTCCAAAGTTTATGAAGAGTCTCATAAAATAGTTGAAGATATGCTGACTAAAAAGTCTATGGATGGAGAGTCAATTGGAATGAGTCATGTGTCTATATCAATTGCAAATGAAAAAAAGGATCAGAATGTGGACACTGTTGATCTTGGTGGGGCAAAAGCAATAAAGAGCCGAGATTGCTTAGATAGGACTAAAAAAAGGCATCCAACTTGGCTTGAGAAATTGGATAAAAAGAGACAAAAAAGGCTATCACAGACTAAGAGAAAGAAAAAATTGGAACAATCTCCTGCAAACAATGATGGTACACATGCTTTGAATGGAAGGAAGAGAAAGAAAAAATTGGAACAATCTCCAGCAACCCATGATGGCATACATGCTTGGAATGGAAGCCAATCTGGATATGGAAGCCATGCTTTGATGGCATCTCAAACTGAGAATGCAAGTCGACATTTACCTTTAACAGAAGCTGACAATGGAAGTCTACATGAGATTAGGATCCAAATGTCAAATGAGATTAGGATCTAA
Protein sequence

>Msa0747180

MVETTHVEHDANLHHSSPPLGTDNVNITSNPMVEGVEKLVNDIVQQGKESTVSNVPHLEMEFESEALAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRKFVCSKEGRRGVDKRDYLTKEARAETRTGCLARMVISLDRKIGKYKVIDFVAEHNHLLLPAEYVYMIRSHRHISESQASQIVLADESGLKPKDFHEFVSKQAGGINTVGYTRQDHRNLLRTKRNHSLRYGEVGALLIHFKKQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVVIFDTTFKTNKNYRPLGVFVGLNSHRQTIVYGAALLYDETIPSFQWLFETFLKAMGGKKPKTILTDQDAAMAKALSIVMPETFHGLCTWHIRENALRHVNHLYQQSSQFCSDFEACIDLHEEEEEFLSGWEALLVEHNVSKDSWLHNIFRFKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLIQFFTHFERVVNGKRNNESEAEYESRQKLPRLKMKKIPMLVQAGNVYTTRIFEEFQDEYEECQASCLRNLKEGSYVVTNYDNSKERIVVANHMDKTVACDCRKFETHGILCSHALKVLDFMNVKLIPQQYILKRWPRDARLGFKLSNRASESHETYTFLSKVYEESHKIVEDMLTKKSMDGESIGMSHVSISIANEKKDQNVDTVDLGGAKAIKSRDCLDRTKKRHPTWLEKLDKKRQKRLSQTKRKKKLEQSPANNDGTHALNGRKRKKKLEQSPATHDGIHAWNGSQSGYGSHALMASQTENASRHLPLTEADNGSLHEIRIQMSNEIRI*