Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035750 | XP_013449742.1 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035750 | sp|Q99633|PRP18_HUMAN | 35.204 | 392 | 188 | 9 | 1 | 376 | 1 | 342 | 7.84e-63 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035750 | A0A072UD53 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0115790 | Msa1035750 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
| Msa0137480 | Msa1035750 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa1035750 | Msa1117240 | 0.808352 | 3.230351e-50 | -8.615850e-47 |
| Msa1035750 | Msa1341060 | 0.819662 | 1.032380e-52 | -8.615850e-47 |
| Msa1035750 | Msa1392980 | 0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0878220 | Msa1035750 | 0.810473 | 1.132670e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035750 | MtrunA17_Chr7g0259901 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035750 | AT1G03140.1 | 70.519 | 424 | 108 | 3 | 1 | 411 | 1 | 420 | 0.0 | 563 |
| Msa1035750 | AT1G54590.1 | 65.411 | 292 | 76 | 7 | 122 | 407 | 85 | 357 | 6.24e-127 | 371 |
Find 136 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATATGATAATGTCAATTA+AGG | 0.185033 | 7_1:-71729102 | None:intergenic |
| CTGTATGAGGCGAGATTATC+TGG | 0.294838 | 7_1:+71728726 | Msa1035750:CDS |
| AAACAACCTGTGACGTTATT+CGG | 0.305283 | 7_1:+71725371 | Msa1035750:CDS |
| TTTCTTGCCGCCGGTTTCTT+CGG | 0.312109 | 7_1:-71725090 | None:intergenic |
| GCATGTACTTCAGGTTCTTC+AGG | 0.319015 | 7_1:+71728666 | Msa1035750:intron |
| AGCAGTTGAGTTTAACAGTT+TGG | 0.335075 | 7_1:+71728963 | Msa1035750:CDS |
| CGGCGGATGACTTCTTGTTT+AGG | 0.340183 | 7_1:-71725335 | None:intergenic |
| CTTAAATACGTTCTCAAAGC+TGG | 0.353113 | 7_1:+71725422 | Msa1035750:CDS |
| CTGGCCTATCGGTGTTACTA+TGG | 0.360585 | 7_1:+71728792 | Msa1035750:CDS |
| TGAGAAGCTCTTGCTTTAGA+AGG | 0.370756 | 7_1:-71725049 | None:intergenic |
| GTGTGATGAGGATAAGATTT+TGG | 0.371707 | 7_1:+71725691 | Msa1035750:CDS |
| TAGAACTGTAAAGAAGATTC+AGG | 0.374392 | 7_1:-71729305 | None:intergenic |
| AGAAGGTCCATCTAGGGTTT+CGG | 0.380166 | 7_1:-71725032 | None:intergenic |
| TTAAACTCAACTGCTTTAGA+TGG | 0.395372 | 7_1:-71728955 | None:intergenic |
| TGTTCGATTTCCACCCCATT+TGG | 0.396431 | 7_1:+71729356 | Msa1035750:three_prime_UTR |
| GTTTATAGTATAGTCAGTTC+AGG | 0.401333 | 7_1:+71729234 | Msa1035750:three_prime_UTR |
| TTCGTCGGGGAGGGAAGCGC+TGG | 0.401745 | 7_1:-71725288 | None:intergenic |
| CTGCAATGGACCATTATATC+AGG | 0.408980 | 7_1:+71728749 | Msa1035750:CDS |
| TTGCTTTAGAAGGTCCATCT+AGG | 0.412477 | 7_1:-71725039 | None:intergenic |
| CGGAGAAGCGGACGGCTAAA+GGG | 0.420729 | 7_1:+71725771 | Msa1035750:CDS |
| AAAATAAATTAACTATCTCT+TGG | 0.424273 | 7_1:-71729078 | None:intergenic |
| CGGTTTCTTCGGCTAGGGAT+TGG | 0.425410 | 7_1:-71725079 | None:intergenic |
| AGTTTAACAGTTTGGCAAAT+GGG | 0.428747 | 7_1:+71728971 | Msa1035750:CDS |
| CGATAGCCAGCCTGATATAA+TGG | 0.430348 | 7_1:-71728759 | None:intergenic |
| TTCAGTGTTCTGATCGGAAA+AGG | 0.433296 | 7_1:-71724984 | None:intergenic |
| TCGGCAGGCACTAATGTTGA+TGG | 0.435972 | 7_1:+71728696 | Msa1035750:CDS |
| TTCGGACGACGGTGCGGTGG+TGG | 0.439684 | 7_1:-71725014 | None:intergenic |
| AGTCAGTTCAGGCGCTGTTT+CGG | 0.440498 | 7_1:+71729245 | Msa1035750:three_prime_UTR |
| TGGCTATCGGGAATGCTCCC+TGG | 0.443575 | 7_1:+71728773 | Msa1035750:CDS |
| ACGGAGAAGCGGACGGCTAA+AGG | 0.445518 | 7_1:+71725770 | Msa1035750:CDS |
| TATGGGGTAACAAGACCAAA+TGG | 0.449914 | 7_1:-71729371 | None:intergenic |
| GAGTTTAACAGTTTGGCAAA+TGG | 0.450367 | 7_1:+71728970 | Msa1035750:CDS |
| CCGTCGTCCGAAACCCTAGA+TGG | 0.452345 | 7_1:+71725025 | Msa1035750:exon |
| AAGAAGTCATCCGCCGTCTC+CGG | 0.452806 | 7_1:+71725342 | Msa1035750:CDS |
| TTGAGGAAGAGGCAGAAGAC+GGG | 0.457591 | 7_1:+71725512 | Msa1035750:CDS |
| GATTTGTTTCTGTTGGATCT+CGG | 0.459315 | 7_1:-71725126 | None:intergenic |
| GTATCGCGCACACTGCTTGA+AGG | 0.459806 | 7_1:-71725810 | None:intergenic |
| AGCGGCGGAGGTGACGGAGG+AGG | 0.463997 | 7_1:-71725258 | None:intergenic |
| GAGGATGGTGATGGTGGTGC+TGG | 0.465798 | 7_1:+71725581 | Msa1035750:CDS |
| ATTGCACGGATTCTCAATAC+TGG | 0.466817 | 7_1:-71729136 | None:intergenic |
| GCTGTTGAATGAGTGGAAAC+AGG | 0.467823 | 7_1:+71725727 | Msa1035750:CDS |
| AGTCGTCTGAGGAGAGGCTT+AGG | 0.468760 | 7_1:+71729043 | Msa1035750:CDS |
| CATTATATCAGGCTGGCTAT+CGG | 0.468919 | 7_1:+71728760 | Msa1035750:CDS |
| CATATGATAATGTCAATTAA+GGG | 0.469576 | 7_1:-71729101 | None:intergenic |
| TGCTTTAGAAGGTCCATCTA+GGG | 0.472036 | 7_1:-71725038 | None:intergenic |
| GCTGGATGAAGCAGCGGCGG+AGG | 0.472515 | 7_1:-71725270 | None:intergenic |
| GGACGACGGTGCGGTGGTGG+TGG | 0.474434 | 7_1:-71725011 | None:intergenic |
| ATTATATCAGGCTGGCTATC+GGG | 0.475178 | 7_1:+71728761 | Msa1035750:CDS |
| GACGGCTAAAGGGAAGTCTA+TGG | 0.476462 | 7_1:+71725781 | Msa1035750:CDS |
| CAATCCCTAGCCGAAGAAAC+CGG | 0.477260 | 7_1:+71725080 | Msa1035750:CDS |
| TTAGCAGAAGAGAGATTTAG+TGG | 0.482256 | 7_1:+71729012 | Msa1035750:CDS |
| GGGAATGCTCCCTGGCCTAT+CGG | 0.486347 | 7_1:+71728781 | Msa1035750:CDS |
| CTATACTATAAACTAATACT+AGG | 0.491395 | 7_1:-71729224 | None:intergenic |
| TCCTACAAAACTTAAACAGC+GGG | 0.493480 | 7_1:-71725838 | None:intergenic |
| GATGATGATTTGAGTGATTG+TGG | 0.495482 | 7_1:+71725605 | Msa1035750:CDS |
| CTGCTTTAGATGGCAGTGTC+GGG | 0.496151 | 7_1:-71728945 | None:intergenic |
| TGATTTCTTGCGTGATATTG+CGG | 0.497819 | 7_1:+71725487 | Msa1035750:CDS |
| GAGGATGGTGCTGCTGAGGA+TGG | 0.497989 | 7_1:+71725566 | Msa1035750:CDS |
| AGGTTCTTCAGGATGACATT+CGG | 0.502212 | 7_1:+71728677 | Msa1035750:intron |
| ATGGGGTAACAAGACCAAAT+GGG | 0.507411 | 7_1:-71729370 | None:intergenic |
| GTTGGTTGATGAGGTTGTTA+CGG | 0.509127 | 7_1:-71725231 | None:intergenic |
| TGCCGCCGGTTTCTTCGGCT+AGG | 0.513870 | 7_1:-71725085 | None:intergenic |
| GAGAATCCGTGCAATGTATG+AGG | 0.514561 | 7_1:+71729144 | Msa1035750:three_prime_UTR |
| TAGTGGTGGTGATAATGATA+AGG | 0.515615 | 7_1:+71725634 | Msa1035750:CDS |
| TGAAGCAGCGGCGGAGGTGA+CGG | 0.515872 | 7_1:-71725264 | None:intergenic |
| CATAGTAACACCGATAGGCC+AGG | 0.517646 | 7_1:-71728791 | None:intergenic |
| TAAGGATTTGAAAAGGATGA+AGG | 0.521027 | 7_1:+71725652 | Msa1035750:CDS |
| ATTTCTCCTCATACATTGCA+CGG | 0.521071 | 7_1:-71729150 | None:intergenic |
| GTTGCGTGAGATGGCGGAGA+CGG | 0.528632 | 7_1:+71725751 | Msa1035750:CDS |
| GGTGGAGACGGTGTCGGAGG+TGG | 0.529873 | 7_1:-71725210 | None:intergenic |
| AGTGATTGTGGTGGATCTAG+TGG | 0.530233 | 7_1:+71725617 | Msa1035750:CDS |
| GCGAGATTATCTGGCTGCAA+TGG | 0.530625 | 7_1:+71728735 | Msa1035750:CDS |
| CAAAGCTGGATTGTTTGAAG+TGG | 0.534244 | 7_1:+71725436 | Msa1035750:CDS |
| AATTAACTATCTCTTGGAGC+AGG | 0.536566 | 7_1:-71729072 | None:intergenic |
| CCTATCGGTGTTACTATGGT+TGG | 0.537411 | 7_1:+71728796 | Msa1035750:CDS |
| CTTCTTGTTTAGGAAGGACG+AGG | 0.539570 | 7_1:-71725325 | None:intergenic |
| ATAATGATAAGGATTTGAAA+AGG | 0.540471 | 7_1:+71725645 | Msa1035750:CDS |
| TTAAGAAGCTGTTGAATGAG+TGG | 0.541386 | 7_1:+71725720 | Msa1035750:CDS |
| TCTTCAGGATGACATTCGGC+AGG | 0.544712 | 7_1:+71728681 | Msa1035750:CDS |
| GTTGAGGAAGAGGCAGAAGA+CGG | 0.547478 | 7_1:+71725511 | Msa1035750:CDS |
| GGTGCTGCTGAGGATGGTGA+TGG | 0.548826 | 7_1:+71725572 | Msa1035750:CDS |
| TAGCAGAAGAGAGATTTAGT+GGG | 0.549817 | 7_1:+71729013 | Msa1035750:CDS |
| AAGCGGCAGAAGGCGGAGGA+TGG | 0.550000 | 7_1:+71725551 | Msa1035750:CDS |
| ACTGCTTTAGATGGCAGTGT+CGG | 0.551623 | 7_1:-71728946 | None:intergenic |
| TTCCTACAAAACTTAAACAG+CGG | 0.554797 | 7_1:-71725839 | None:intergenic |
| GGAGAGAAACTTAAAACCAA+GGG | 0.556012 | 7_1:-71729203 | None:intergenic |
| GGATGACTTCTTGTTTAGGA+AGG | 0.558895 | 7_1:-71725331 | None:intergenic |
| TTTGAAGAATTTCTTGCCGC+CGG | 0.562591 | 7_1:-71725099 | None:intergenic |
| TGATGGTTGACTGCTGTATG+AGG | 0.563302 | 7_1:+71728713 | Msa1035750:CDS |
| GGAGGAAGCGTTGGTTGATG+AGG | 0.570703 | 7_1:-71725240 | None:intergenic |
| GGTTTCGGACGACGGTGCGG+TGG | 0.572672 | 7_1:-71725017 | None:intergenic |
| TAGGAAGCGGCAGAAGGCGG+AGG | 0.573088 | 7_1:+71725547 | Msa1035750:CDS |
| GAGTGATAGGAAGCGGCAGA+AGG | 0.573616 | 7_1:+71725541 | Msa1035750:CDS |
| ACAGGAGTTGCGTGAGATGG+CGG | 0.582423 | 7_1:+71725745 | Msa1035750:CDS |
| GCTGCTGAGGATGGTGATGG+TGG | 0.582674 | 7_1:+71725575 | Msa1035750:CDS |
| GGTGACGGAGGAGGAAGCGT+TGG | 0.583513 | 7_1:-71725249 | None:intergenic |
| AGCAGAAGAGAGATTTAGTG+GGG | 0.589925 | 7_1:+71729014 | Msa1035750:CDS |
| AATGGACCATTATATCAGGC+TGG | 0.593837 | 7_1:+71728753 | Msa1035750:CDS |
| AGCGCTGGATGAAGCAGCGG+CGG | 0.595214 | 7_1:-71725273 | None:intergenic |
| ATATTGCGGAGTTGAGGAAG+AGG | 0.597099 | 7_1:+71725501 | Msa1035750:CDS |
| GAAACAGGAGTTGCGTGAGA+TGG | 0.597500 | 7_1:+71725742 | Msa1035750:CDS |
| TCTTCGCCGAATAACGTCAC+AGG | 0.600728 | 7_1:-71725377 | None:intergenic |
| TGGGGTAACAAGACCAAATG+GGG | 0.601668 | 7_1:-71729369 | None:intergenic |
| GGCGGAGGATGGTGCTGCTG+AGG | 0.603000 | 7_1:+71725562 | Msa1035750:CDS |
| AGATGGCGGAGACGGAGAAG+CGG | 0.603954 | 7_1:+71725759 | Msa1035750:CDS |
| ACAATGATGCGAGACTCGAT+CGG | 0.606783 | 7_1:+71725399 | Msa1035750:CDS |
| GGCGGAGACGGAGAAGCGGA+CGG | 0.607467 | 7_1:+71725763 | Msa1035750:CDS |
| TGAGGAAGAGGCAGAAGACG+GGG | 0.610880 | 7_1:+71725513 | Msa1035750:CDS |
| TGAAGTGGATAGTGATATGA+CGG | 0.612285 | 7_1:+71725451 | Msa1035750:CDS |
| GATTGTGGTGGATCTAGTGG+TGG | 0.612515 | 7_1:+71725620 | Msa1035750:CDS |
| AGTACTTACAATCAGTGAAG+AGG | 0.612562 | 7_1:+71728896 | Msa1035750:CDS |
| TGATAGGAAGCGGCAGAAGG+CGG | 0.617704 | 7_1:+71725544 | Msa1035750:CDS |
| CCATCTAGGGTTTCGGACGA+CGG | 0.619896 | 7_1:-71725025 | None:intergenic |
| GGAAGCGCTGGATGAAGCAG+CGG | 0.620240 | 7_1:-71725276 | None:intergenic |
| AGGAGAGAAACTTAAAACCA+AGG | 0.620790 | 7_1:-71729204 | None:intergenic |
| AGCAGCGGCGGAGGTGACGG+AGG | 0.622368 | 7_1:-71725261 | None:intergenic |
| TGCGTGATATTGCGGAGTTG+AGG | 0.622575 | 7_1:+71725495 | Msa1035750:CDS |
| TGAGGTTGTTACGGTGGAGA+CGG | 0.623480 | 7_1:-71725222 | None:intergenic |
| GTGGATAGTGATATGACGGA+AGG | 0.630455 | 7_1:+71725455 | Msa1035750:CDS |
| GGTTTGTTCAGTGTTCTGAT+CGG | 0.631334 | 7_1:-71724990 | None:intergenic |
| GCAATCAGTCGTCTGAGGAG+AGG | 0.632643 | 7_1:+71729037 | Msa1035750:CDS |
| TGTTACGGTGGAGACGGTGT+CGG | 0.645226 | 7_1:-71725216 | None:intergenic |
| ATAGTAACACCGATAGGCCA+GGG | 0.645385 | 7_1:-71728790 | None:intergenic |
| GATGATTTGAGTGATTGTGG+TGG | 0.645582 | 7_1:+71725608 | Msa1035750:CDS |
| TACGGTGGAGACGGTGTCGG+AGG | 0.648175 | 7_1:-71725213 | None:intergenic |
| GAGAAACTTAAAACCAAGGG+GGG | 0.649505 | 7_1:-71729200 | None:intergenic |
| CCAACCATAGTAACACCGAT+AGG | 0.659700 | 7_1:-71728796 | None:intergenic |
| GCAGAAGAGAGATTTAGTGG+GGG | 0.669816 | 7_1:+71729015 | Msa1035750:CDS |
| GGTTGATGAGGTTGTTACGG+TGG | 0.676360 | 7_1:-71725228 | None:intergenic |
| TAGGGTTTCGGACGACGGTG+CGG | 0.679728 | 7_1:-71725020 | None:intergenic |
| TGTTTCGGTAAGCACTACAA+TGG | 0.685866 | 7_1:+71729260 | Msa1035750:three_prime_UTR |
| TTTCGATGAGCTGTGTGATG+AGG | 0.689854 | 7_1:+71725679 | Msa1035750:CDS |
| GAGAGAAACTTAAAACCAAG+GGG | 0.695446 | 7_1:-71729202 | None:intergenic |
| GGTAACAAGACCAAATGGGG+TGG | 0.698675 | 7_1:-71729366 | None:intergenic |
| TCCCTAGCCGAAGAAACCGG+CGG | 0.703034 | 7_1:+71725083 | Msa1035750:CDS |
| AGAGAAACTTAAAACCAAGG+GGG | 0.748242 | 7_1:-71729201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTGAATAGTTAATCTTA+GGG | + | chr7_1:71726034-71726053 | Msa1035750:intron | 15.0% |
| !!! | AGTTTAAAACAAATTGAATT+AGG | + | chr7_1:71726096-71726115 | Msa1035750:intron | 15.0% |
| !!! | TAGATGTTTTATATTTTTGT+TGG | + | chr7_1:71726309-71726328 | Msa1035750:intron | 15.0% |
| !!! | AATAGTATTTTATTTTCACA+TGG | + | chr7_1:71726413-71726432 | Msa1035750:intron | 15.0% |
| !! | AAATTGTTTAATATACAATC+AGG | + | chr7_1:71726603-71726622 | Msa1035750:intron | 15.0% |
| !!! | GGCAATTTTATATTTTATTT+TGG | + | chr7_1:71727461-71727480 | Msa1035750:intron | 15.0% |
| !!! | TTATATTTTATTTTGGATTC+TGG | + | chr7_1:71727468-71727487 | Msa1035750:intron | 15.0% |
| !!! | TTGAATTTTACTGTATAAAT+GGG | + | chr7_1:71728246-71728265 | Msa1035750:intron | 15.0% |
| !!! | AGAATATCTTTAAGATAAAA+GGG | - | chr7_1:71728313-71728332 | None:intergenic | 15.0% |
| !!! | TAGAATATCTTTAAGATAAA+AGG | - | chr7_1:71728314-71728333 | None:intergenic | 15.0% |
| !! | TATCTTAAAGATATTCTATT+TGG | + | chr7_1:71728316-71728335 | Msa1035750:intron | 15.0% |
| !! | TTGTATTCTAACTAATAAAA+TGG | + | chr7_1:71728636-71728655 | Msa1035750:intron | 15.0% |
| !! | AAAATAAATTAACTATCTCT+TGG | - | chr7_1:71729081-71729100 | None:intergenic | 15.0% |
| !! | ATAATGATAAGGATTTGAAA+AGG | + | chr7_1:71725645-71725664 | Msa1035750:CDS | 20.0% |
| !! | CTAATTGAATAGTTAATCTT+AGG | + | chr7_1:71726033-71726052 | Msa1035750:intron | 20.0% |
| !!! | TTATATTTTAAGGTGAGTTT+TGG | + | chr7_1:71726202-71726221 | Msa1035750:intron | 20.0% |
| !!! | TTATATTTTTGTTGGAAATG+CGG | + | chr7_1:71726317-71726336 | Msa1035750:intron | 20.0% |
| !!! | TTATGCAAATTATTAAGTTG+CGG | - | chr7_1:71727418-71727437 | None:intergenic | 20.0% |
| !! | GAAAATAACATGATATTTGA+TGG | + | chr7_1:71727440-71727459 | Msa1035750:intron | 20.0% |
| !! | AAATATGATTGAAGTTGTAA+AGG | + | chr7_1:71727782-71727801 | Msa1035750:intron | 20.0% |
| !! | CAAAGAATTCAATAATAACA+AGG | - | chr7_1:71728045-71728064 | None:intergenic | 20.0% |
| !!! | CTTGTTATTATTGAATTCTT+TGG | + | chr7_1:71728043-71728062 | Msa1035750:intron | 20.0% |
| !!! | GTTGAATTTTACTGTATAAA+TGG | + | chr7_1:71728245-71728264 | Msa1035750:intron | 20.0% |
| !! | AAGATATTCTATTTGGATAT+CGG | + | chr7_1:71728323-71728342 | Msa1035750:intron | 20.0% |
| !!! | CATATGATAATGTCAATTAA+GGG | - | chr7_1:71729104-71729123 | None:intergenic | 20.0% |
| !!! | TCATATGATAATGTCAATTA+AGG | - | chr7_1:71729105-71729124 | None:intergenic | 20.0% |
| !! | CTATACTATAAACTAATACT+AGG | - | chr7_1:71729227-71729246 | None:intergenic | 20.0% |
| !!! | GAAATTTTACTTAAGATATG+GGG | - | chr7_1:71729390-71729409 | None:intergenic | 20.0% |
| !!! | GGAAATTTTACTTAAGATAT+GGG | - | chr7_1:71729391-71729410 | None:intergenic | 20.0% |
| !!! | TGGAAATTTTACTTAAGATA+TGG | - | chr7_1:71729392-71729411 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTTTGTAGGAAAA+AGG | + | chr7_1:71725844-71725863 | Msa1035750:CDS | 25.0% |
| !!! | GTATTTGGTGTTAGTTTAAT+AGG | + | chr7_1:71725963-71725982 | Msa1035750:intron | 25.0% |
| ! | AAAACAAATTGAATTAGGAG+TGG | + | chr7_1:71726101-71726120 | Msa1035750:intron | 25.0% |
| !! | ATCTTCTGTCATTATGTTTT+CGG | + | chr7_1:71726134-71726153 | Msa1035750:intron | 25.0% |
| ! | TACAATATTCTTGTGTATCT+AGG | - | chr7_1:71726178-71726197 | None:intergenic | 25.0% |
| ! | AATTATGGTAGGATATGTTA+AGG | + | chr7_1:71726235-71726254 | Msa1035750:intron | 25.0% |
| !!! | TATATTTTTGTTGGAAATGC+GGG | + | chr7_1:71726318-71726337 | Msa1035750:intron | 25.0% |
| ! | TTAATATACAATCAGGACTT+AGG | + | chr7_1:71726610-71726629 | Msa1035750:intron | 25.0% |
| ! | AATACAAAGAACAACTAACA+AGG | - | chr7_1:71726747-71726766 | None:intergenic | 25.0% |
| ! | CTTTGTATTATATGTCTTAG+AGG | + | chr7_1:71726758-71726777 | Msa1035750:intron | 25.0% |
| ! | TTCTCTTATATTGTTTCATG+AGG | - | chr7_1:71726825-71726844 | None:intergenic | 25.0% |
| ! | AAATATCCAATCTATAGTGT+AGG | - | chr7_1:71726965-71726984 | None:intergenic | 25.0% |
| ! | TTATCCATGCAAAAAGTAAA+CGG | + | chr7_1:71727030-71727049 | Msa1035750:intron | 25.0% |
| ! | ATCCACTTTATTCATGTAAA+CGG | + | chr7_1:71727116-71727135 | Msa1035750:intron | 25.0% |
| !!! | GTACTTTTTGTTTGAAAGAT+GGG | + | chr7_1:71727490-71727509 | Msa1035750:intron | 25.0% |
| ! | AAACTTTAGTGAATTTGATG+TGG | + | chr7_1:71727516-71727535 | Msa1035750:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | + | chr7_1:71727640-71727659 | Msa1035750:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | chr7_1:71727668-71727687 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr7_1:71727672-71727691 | Msa1035750:intron | 25.0% |
| ! | TATTTGGATATCGGTAATAT+AGG | + | chr7_1:71728332-71728351 | Msa1035750:intron | 25.0% |
| ! | TCTAACTAATAAAATGGATG+TGG | + | chr7_1:71728642-71728661 | Msa1035750:intron | 25.0% |
| !! | TATTTGTGTAGATCTTTTCA+CGG | - | chr7_1:71728840-71728859 | None:intergenic | 25.0% |
| !!! | GTTTTTGGATTTGTTTCTGT+TGG | - | chr7_1:71725136-71725155 | None:intergenic | 30.0% |
| TAAGGATTTGAAAAGGATGA+AGG | + | chr7_1:71725652-71725671 | Msa1035750:CDS | 30.0% | |
| TTCCTACAAAACTTAAACAG+CGG | - | chr7_1:71725842-71725861 | None:intergenic | 30.0% | |
| !!! | AGGTGAGTTTTATTCTGTTT+AGG | + | chr7_1:71725864-71725883 | Msa1035750:intron | 30.0% |
| !!! | TTTTAAGGTGAGTTTTGGAA+AGG | + | chr7_1:71726207-71726226 | Msa1035750:intron | 30.0% |
| !! | ACTGTTTGAACATGTTTTGA+AGG | + | chr7_1:71726360-71726379 | Msa1035750:intron | 30.0% |
| !! | CTGTTTGAACATGTTTTGAA+GGG | + | chr7_1:71726361-71726380 | Msa1035750:intron | 30.0% |
| AAACAATTTGTAAGCATGTC+CGG | - | chr7_1:71726592-71726611 | None:intergenic | 30.0% | |
| TGGACTTGAAACATATGATT+TGG | + | chr7_1:71726639-71726658 | Msa1035750:intron | 30.0% | |
| ! | GAAACATATGATTTGGATGT+TGG | + | chr7_1:71726646-71726665 | Msa1035750:intron | 30.0% |
| GGGAGAGTTTCTTTAAATTT+AGG | - | chr7_1:71726851-71726870 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTACACTATAGAT+TGG | + | chr7_1:71726956-71726975 | Msa1035750:intron | 30.0% |
| GAGGTTTACATGGATAAAAT+TGG | - | chr7_1:71727096-71727115 | None:intergenic | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | - | chr7_1:71727115-71727134 | None:intergenic | 30.0% | |
| TGAGGTTTACATGAATAAAG+TGG | - | chr7_1:71727121-71727140 | None:intergenic | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | - | chr7_1:71727115-71727134 | None:intergenic | 30.0% | |
| !! | TTGGTTCTAAAAATATCCAG+TGG | - | chr7_1:71727223-71727242 | None:intergenic | 30.0% |
| ATCAGAGTACAGTACAAAAT+TGG | - | chr7_1:71727242-71727261 | None:intergenic | 30.0% | |
| TTGTACTGTACTCTGATTTA+TGG | + | chr7_1:71727245-71727264 | Msa1035750:intron | 30.0% | |
| ! | ATTATTAAGTTGCGGTAACA+AGG | - | chr7_1:71727410-71727429 | None:intergenic | 30.0% |
| !! | GGTACTTTTTGTTTGAAAGA+TGG | + | chr7_1:71727489-71727508 | Msa1035750:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr7_1:71727652-71727671 | Msa1035750:intron | 30.0% |
| ! | TTTGCTATAAATTCCGTAGT+TGG | + | chr7_1:71727809-71727828 | Msa1035750:intron | 30.0% |
| TACATTCATGATTCCAACTA+CGG | - | chr7_1:71727825-71727844 | None:intergenic | 30.0% | |
| ! | ATTTTACACACCAATTCACA+AGG | - | chr7_1:71727855-71727874 | None:intergenic | 30.0% |
| CTACATCTCACTTTAGATTT+GGG | - | chr7_1:71727905-71727924 | None:intergenic | 30.0% | |
| TCTACATCTCACTTTAGATT+TGG | - | chr7_1:71727906-71727925 | None:intergenic | 30.0% | |
| ATCAAGCAATTCAGTGATAT+GGG | + | chr7_1:71727975-71727994 | Msa1035750:intron | 30.0% | |
| TGTTTATATGCACGTATTGT+TGG | + | chr7_1:71728069-71728088 | Msa1035750:intron | 30.0% | |
| GTTTATATGCACGTATTGTT+GGG | + | chr7_1:71728070-71728089 | Msa1035750:intron | 30.0% | |
| ! | TCTGCATTTCACGTATATTT+TGG | + | chr7_1:71728121-71728140 | Msa1035750:intron | 30.0% |
| !! | ACGTATATTTTGGAGAATAC+AGG | + | chr7_1:71728131-71728150 | Msa1035750:intron | 30.0% |
| !! | AGGTTTTAATCTTGTTAGAG+TGG | + | chr7_1:71728151-71728170 | Msa1035750:intron | 30.0% |
| !!! | TTGTTCTTTTGTTTTGACTC+AGG | + | chr7_1:71728198-71728217 | Msa1035750:intron | 30.0% |
| !!! | TGTTTTGACTCAGGAAATTT+AGG | + | chr7_1:71728207-71728226 | Msa1035750:intron | 30.0% |
| !! | CACTAAATATCAATTTGCTG+CGG | - | chr7_1:71728361-71728380 | None:intergenic | 30.0% |
| ! | TTATTTGAGATCCTATGTCA+TGG | + | chr7_1:71728510-71728529 | Msa1035750:intron | 30.0% |
| ! | TATTTGAGATCCTATGTCAT+GGG | + | chr7_1:71728511-71728530 | Msa1035750:intron | 30.0% |
| ! | ATTTGTGTAGATCTTTTCAC+GGG | - | chr7_1:71728839-71728858 | None:intergenic | 30.0% |
| ! | TTAAACTCAACTGCTTTAGA+TGG | - | chr7_1:71728958-71728977 | None:intergenic | 30.0% |
| AGTTTAACAGTTTGGCAAAT+GGG | + | chr7_1:71728971-71728990 | Msa1035750:CDS | 30.0% | |
| GTTTATAGTATAGTCAGTTC+AGG | + | chr7_1:71729234-71729253 | Msa1035750:three_prime_UTR | 30.0% | |
| GATACAAGACCTAAAAATGA+AGG | - | chr7_1:71729286-71729305 | None:intergenic | 30.0% | |
| TAGAACTGTAAAGAAGATTC+AGG | - | chr7_1:71729308-71729327 | None:intergenic | 30.0% | |
| !! | GGAAAAGGTTTTTGAGGATT+TGG | - | chr7_1:71724972-71724991 | None:intergenic | 35.0% |
| !! | GATTTGTTTCTGTTGGATCT+CGG | - | chr7_1:71725129-71725148 | None:intergenic | 35.0% |
| !!! | TGAGTTGCGTTTTTTGGATT+TGG | - | chr7_1:71725189-71725208 | None:intergenic | 35.0% |
| !!! | TCACAGGTTGTTTTAGAAAC+CGG | - | chr7_1:71725364-71725383 | None:intergenic | 35.0% |
| AAACAACCTGTGACGTTATT+CGG | + | chr7_1:71725371-71725390 | Msa1035750:CDS | 35.0% | |
| CTTAAATACGTTCTCAAAGC+TGG | + | chr7_1:71725422-71725441 | Msa1035750:CDS | 35.0% | |
| TGAAGTGGATAGTGATATGA+CGG | + | chr7_1:71725451-71725470 | Msa1035750:CDS | 35.0% | |
| TGATTTCTTGCGTGATATTG+CGG | + | chr7_1:71725487-71725506 | Msa1035750:CDS | 35.0% | |
| GATGATGATTTGAGTGATTG+TGG | + | chr7_1:71725605-71725624 | Msa1035750:CDS | 35.0% | |
| ! | TAGTGGTGGTGATAATGATA+AGG | + | chr7_1:71725634-71725653 | Msa1035750:CDS | 35.0% |
| ! | GTGTGATGAGGATAAGATTT+TGG | + | chr7_1:71725691-71725710 | Msa1035750:CDS | 35.0% |
| TTAAGAAGCTGTTGAATGAG+TGG | + | chr7_1:71725720-71725739 | Msa1035750:CDS | 35.0% | |
| TCCTACAAAACTTAAACAGC+GGG | - | chr7_1:71725841-71725860 | None:intergenic | 35.0% | |
| !! | CATTTAGCAAACCACTTTTC+TGG | + | chr7_1:71725941-71725960 | Msa1035750:intron | 35.0% |
| !! | CAAACCACTTTTCTGGTATT+TGG | + | chr7_1:71725948-71725967 | Msa1035750:intron | 35.0% |
| AACACCAAATACCAGAAAAG+TGG | - | chr7_1:71725955-71725974 | None:intergenic | 35.0% | |
| TAGGAAAACTTACATGCTAG+TGG | + | chr7_1:71725982-71726001 | Msa1035750:intron | 35.0% | |
| TTGTTAACTGTTTGCCGAAA+TGG | + | chr7_1:71726062-71726081 | Msa1035750:intron | 35.0% | |
| TGTTAACTGTTTGCCGAAAT+GGG | + | chr7_1:71726063-71726082 | Msa1035750:intron | 35.0% | |
| ACTTCACTATGTTCCCATTT+CGG | - | chr7_1:71726079-71726098 | None:intergenic | 35.0% | |
| ACAAATTGAATTAGGAGTGG+TGG | + | chr7_1:71726104-71726123 | Msa1035750:intron | 35.0% | |
| CAAATTGAATTAGGAGTGGT+GGG | + | chr7_1:71726105-71726124 | Msa1035750:intron | 35.0% | |
| ! | TTCTGTCATTATGTTTTCGG+AGG | + | chr7_1:71726137-71726156 | Msa1035750:intron | 35.0% |
| ! | TTTTCGGAGGACTTTTTGTA+TGG | + | chr7_1:71726150-71726169 | Msa1035750:intron | 35.0% |
| TTTGGAAAGGTGGTGAATTA+TGG | + | chr7_1:71726220-71726239 | Msa1035750:intron | 35.0% | |
| ! | TATTTTCACATGGAGAGTGA+AGG | + | chr7_1:71726423-71726442 | Msa1035750:intron | 35.0% |
| ! | TTTTACCTTGCATTTGTGAG+AGG | + | chr7_1:71726482-71726501 | Msa1035750:intron | 35.0% |
| ATATACAATCAGGACTTAGG+AGG | + | chr7_1:71726613-71726632 | Msa1035750:intron | 35.0% | |
| !! | GAGGTATTTATCCTTTTGCA+CGG | - | chr7_1:71726806-71726825 | None:intergenic | 35.0% |
| !! | AAGGTGGATGAGGTTTTAAT+GGG | - | chr7_1:71726871-71726890 | None:intergenic | 35.0% |
| !! | TAAGGTGGATGAGGTTTTAA+TGG | - | chr7_1:71726872-71726891 | None:intergenic | 35.0% |
| ATCCACCTTATCCTTGTAAA+CGG | + | chr7_1:71726882-71726901 | Msa1035750:intron | 35.0% | |
| ATCAGAGTACAGTACAACAT+TGG | - | chr7_1:71726994-71727013 | None:intergenic | 35.0% | |
| TTGTACTGTACTCTGATTCA+TGG | + | chr7_1:71726997-71727016 | Msa1035750:intron | 35.0% | |
| TAAAGTGGATGAGGTTTACA+TGG | - | chr7_1:71727106-71727125 | None:intergenic | 35.0% | |
| CACCGTTTACATGAATAAAG+TGG | - | chr7_1:71727145-71727164 | None:intergenic | 35.0% | |
| TGCTGTACAGACTACATTAT+TGG | - | chr7_1:71727183-71727202 | None:intergenic | 35.0% | |
| !! | AAGCCTTATTTCACTAAGTG+GGG | - | chr7_1:71727721-71727740 | None:intergenic | 35.0% |
| !! | CAAGCCTTATTTCACTAAGT+GGG | - | chr7_1:71727722-71727741 | None:intergenic | 35.0% |
| ! | TCTAAAGTGAGATGTAGAAC+TGG | + | chr7_1:71727908-71727927 | Msa1035750:intron | 35.0% |
| CTAAAGTGAGATGTAGAACT+GGG | + | chr7_1:71727909-71727928 | Msa1035750:intron | 35.0% | |
| GATCAAGCAATTCAGTGATA+TGG | + | chr7_1:71727974-71727993 | Msa1035750:intron | 35.0% | |
| AGTCTTTAAACACTCCAAGA+GGG | - | chr7_1:71728177-71728196 | None:intergenic | 35.0% | |
| TAGTCTTTAAACACTCCAAG+AGG | - | chr7_1:71728178-71728197 | None:intergenic | 35.0% | |
| GTATAAATGGGAACTCTTGA+AGG | + | chr7_1:71728258-71728277 | Msa1035750:intron | 35.0% | |
| ! | GAACTCTTGAAGGATTTTAC+TGG | + | chr7_1:71728268-71728287 | Msa1035750:intron | 35.0% |
| ! | TTGAAGGATTTTACTGGACT+TGG | + | chr7_1:71728274-71728293 | Msa1035750:intron | 35.0% |
| ! | TGAAGGATTTTACTGGACTT+GGG | + | chr7_1:71728275-71728294 | Msa1035750:intron | 35.0% |
| GTGAGTAGTTGTACTTTGTT+TGG | + | chr7_1:71728378-71728397 | Msa1035750:intron | 35.0% | |
| AAGAACCTATTACACAAGCT+CGG | - | chr7_1:71728420-71728439 | None:intergenic | 35.0% | |
| CAACGCAATACTAAGACAAA+TGG | - | chr7_1:71728443-71728462 | None:intergenic | 35.0% | |
| GATCTCAAATAACCAGCTAA+GGG | - | chr7_1:71728502-71728521 | None:intergenic | 35.0% | |
| AGTACTTACAATCAGTGAAG+AGG | + | chr7_1:71728896-71728915 | Msa1035750:CDS | 35.0% | |
| ! | GGTTAATGACATTTTGCCAA+CGG | + | chr7_1:71728917-71728936 | Msa1035750:CDS | 35.0% |
| AGCAGTTGAGTTTAACAGTT+TGG | + | chr7_1:71728963-71728982 | Msa1035750:CDS | 35.0% | |
| GAGTTTAACAGTTTGGCAAA+TGG | + | chr7_1:71728970-71728989 | Msa1035750:CDS | 35.0% | |
| TTAGCAGAAGAGAGATTTAG+TGG | + | chr7_1:71729012-71729031 | Msa1035750:CDS | 35.0% | |
| TAGCAGAAGAGAGATTTAGT+GGG | + | chr7_1:71729013-71729032 | Msa1035750:CDS | 35.0% | |
| AATTAACTATCTCTTGGAGC+AGG | - | chr7_1:71729075-71729094 | None:intergenic | 35.0% | |
| ATTTCTCCTCATACATTGCA+CGG | - | chr7_1:71729153-71729172 | None:intergenic | 35.0% | |
| AGAGAAACTTAAAACCAAGG+GGG | - | chr7_1:71729204-71729223 | None:intergenic | 35.0% | |
| GAGAGAAACTTAAAACCAAG+GGG | - | chr7_1:71729205-71729224 | None:intergenic | 35.0% | |
| GGAGAGAAACTTAAAACCAA+GGG | - | chr7_1:71729206-71729225 | None:intergenic | 35.0% | |
| AGGAGAGAAACTTAAAACCA+AGG | - | chr7_1:71729207-71729226 | None:intergenic | 35.0% | |
| !! | CTACAATGGCCTTCATTTTT+AGG | + | chr7_1:71729274-71729293 | Msa1035750:three_prime_UTR | 35.0% |
| ! | CTGATCGGAAAAGGTTTTTG+AGG | - | chr7_1:71724978-71724997 | None:intergenic | 40.0% |
| TTCAGTGTTCTGATCGGAAA+AGG | - | chr7_1:71724987-71725006 | None:intergenic | 40.0% | |
| ! | GGTTTGTTCAGTGTTCTGAT+CGG | - | chr7_1:71724993-71725012 | None:intergenic | 40.0% |
| !! | TGCTTTAGAAGGTCCATCTA+GGG | - | chr7_1:71725041-71725060 | None:intergenic | 40.0% |
| !! | TTGCTTTAGAAGGTCCATCT+AGG | - | chr7_1:71725042-71725061 | None:intergenic | 40.0% |
| ! | TGAGAAGCTCTTGCTTTAGA+AGG | - | chr7_1:71725052-71725071 | None:intergenic | 40.0% |
| TTTGAAGAATTTCTTGCCGC+CGG | - | chr7_1:71725102-71725121 | None:intergenic | 40.0% | |
| ! | TTTCTTCTTCGCGGAGTTTT+TGG | - | chr7_1:71725151-71725170 | None:intergenic | 40.0% |
| !! | GTTGGTTGATGAGGTTGTTA+CGG | - | chr7_1:71725234-71725253 | None:intergenic | 40.0% |
| !! | TGTCTATGTTTTGTTCGTCG+GGG | - | chr7_1:71725304-71725323 | None:intergenic | 40.0% |
| !! | CTGTCTATGTTTTGTTCGTC+GGG | - | chr7_1:71725305-71725324 | None:intergenic | 40.0% |
| !! | GCTGTCTATGTTTTGTTCGT+CGG | - | chr7_1:71725306-71725325 | None:intergenic | 40.0% |
| ! | GGATGACTTCTTGTTTAGGA+AGG | - | chr7_1:71725334-71725353 | None:intergenic | 40.0% |
| !!! | GTTGTTTTAGAAACCGGAGA+CGG | - | chr7_1:71725358-71725377 | None:intergenic | 40.0% |
| CAAAGCTGGATTGTTTGAAG+TGG | + | chr7_1:71725436-71725455 | Msa1035750:CDS | 40.0% | |
| !! | GGATTTTGAGTGATAGGAAG+CGG | + | chr7_1:71725534-71725553 | Msa1035750:CDS | 40.0% |
| GATGATTTGAGTGATTGTGG+TGG | + | chr7_1:71725608-71725627 | Msa1035750:CDS | 40.0% | |
| !! | ACCCGCTGTTTAAGTTTTGT+AGG | + | chr7_1:71725837-71725856 | Msa1035750:CDS | 40.0% |
| TACATGCTAGTGGAATGCAT+CGG | + | chr7_1:71725992-71726011 | Msa1035750:intron | 40.0% | |
| !! | TGCATCGGTTAGAATGTGAT+TGG | + | chr7_1:71726007-71726026 | Msa1035750:intron | 40.0% |
| !!! | TAAGGTGAGTTTTGGAAAGG+TGG | + | chr7_1:71726210-71726229 | Msa1035750:intron | 40.0% |
| GAAAGGTGGTGAATTATGGT+AGG | + | chr7_1:71726224-71726243 | Msa1035750:intron | 40.0% | |
| ATCAACCTCTCACAAATGCA+AGG | - | chr7_1:71726490-71726509 | None:intergenic | 40.0% | |
| !! | AAGGTCACAAGTTTGAGTTG+TGG | - | chr7_1:71726514-71726533 | None:intergenic | 40.0% |
| GTTGAAGCAACAATTGGAGT+TGG | - | chr7_1:71726551-71726570 | None:intergenic | 40.0% | |
| !! | TTTTATCCCCTCTGCTTTTG+TGG | + | chr7_1:71726671-71726690 | Msa1035750:intron | 40.0% |
| AATCACACCACAAAAGCAGA+GGG | - | chr7_1:71726681-71726700 | None:intergenic | 40.0% | |
| TCATAGTCGTTCCTTTCTAG+TGG | + | chr7_1:71726711-71726730 | Msa1035750:intron | 40.0% | |
| TTACAAGGATAAGGTGGATG+AGG | - | chr7_1:71726881-71726900 | None:intergenic | 40.0% | |
| TCAAACTGGTAGCACCAATA+AGG | + | chr7_1:71726908-71726927 | Msa1035750:intron | 40.0% | |
| !!! | AGCACCGTTTACTTTTTGCA+TGG | - | chr7_1:71727037-71727056 | None:intergenic | 40.0% |
| TGCTGTGCAGACTACATTAT+TGG | - | chr7_1:71727073-71727092 | None:intergenic | 40.0% | |
| ! | AAACTAGAGACGTTTTCCAC+TGG | + | chr7_1:71727204-71727223 | Msa1035750:intron | 40.0% |
| CTGCACTTGAATCTCAATCA+AGG | - | chr7_1:71727313-71727332 | None:intergenic | 40.0% | |
| !! | AATGCTTAGCTTTGTAGCAG+TGG | + | chr7_1:71727358-71727377 | Msa1035750:intron | 40.0% |
| !! | ATGCTTAGCTTTGTAGCAGT+GGG | + | chr7_1:71727359-71727378 | Msa1035750:intron | 40.0% |
| CTTATTTCACTAAGTGGGGT+CGG | - | chr7_1:71727717-71727736 | None:intergenic | 40.0% | |
| !! | CCAAGCCTTATTTCACTAAG+TGG | - | chr7_1:71727723-71727742 | None:intergenic | 40.0% |
| CCACTTAGTGAAATAAGGCT+TGG | + | chr7_1:71727720-71727739 | Msa1035750:intron | 40.0% | |
| ! | GTATTCTCAGCCTTGTGAAT+TGG | + | chr7_1:71727842-71727861 | Msa1035750:intron | 40.0% |
| TATGACCGAGCTTGTGTAAT+AGG | + | chr7_1:71728412-71728431 | Msa1035750:intron | 40.0% | |
| GGATCTCAAATAACCAGCTA+AGG | - | chr7_1:71728503-71728522 | None:intergenic | 40.0% | |
| GATATGAAATGTGTCAGTGC+TGG | + | chr7_1:71728596-71728615 | Msa1035750:intron | 40.0% | |
| AGGTTCTTCAGGATGACATT+CGG | + | chr7_1:71728677-71728696 | Msa1035750:intron | 40.0% | |
| CTGCAATGGACCATTATATC+AGG | + | chr7_1:71728749-71728768 | Msa1035750:CDS | 40.0% | |
| AATGGACCATTATATCAGGC+TGG | + | chr7_1:71728753-71728772 | Msa1035750:CDS | 40.0% | |
| ! | CATTATATCAGGCTGGCTAT+CGG | + | chr7_1:71728760-71728779 | Msa1035750:CDS | 40.0% |
| ! | ATTATATCAGGCTGGCTATC+GGG | + | chr7_1:71728761-71728780 | Msa1035750:CDS | 40.0% |
| AGCAGAAGAGAGATTTAGTG+GGG | + | chr7_1:71729014-71729033 | Msa1035750:CDS | 40.0% | |
| ATTGCACGGATTCTCAATAC+TGG | - | chr7_1:71729139-71729158 | None:intergenic | 40.0% | |
| GAGAAACTTAAAACCAAGGG+GGG | - | chr7_1:71729203-71729222 | None:intergenic | 40.0% | |
| TGTTTCGGTAAGCACTACAA+TGG | + | chr7_1:71729260-71729279 | Msa1035750:three_prime_UTR | 40.0% | |
| ATGGGGTAACAAGACCAAAT+GGG | - | chr7_1:71729373-71729392 | None:intergenic | 40.0% | |
| TATGGGGTAACAAGACCAAA+TGG | - | chr7_1:71729374-71729393 | None:intergenic | 40.0% | |
| ! | AGAAGGTCCATCTAGGGTTT+CGG | - | chr7_1:71725035-71725054 | None:intergenic | 45.0% |
| ! | GTTCGCGTTTTTCTTCTTCG+CGG | - | chr7_1:71725160-71725179 | None:intergenic | 45.0% |
| !!! | GGTGGTTGAGTTGCGTTTTT+TGG | - | chr7_1:71725195-71725214 | None:intergenic | 45.0% |
| !! | TATGTTTTGTTCGTCGGGGA+GGG | - | chr7_1:71725300-71725319 | None:intergenic | 45.0% |
| ! | CTTCTTGTTTAGGAAGGACG+AGG | - | chr7_1:71725328-71725347 | None:intergenic | 45.0% |
| ACAATGATGCGAGACTCGAT+CGG | + | chr7_1:71725399-71725418 | Msa1035750:CDS | 45.0% | |
| ! | GTGGATAGTGATATGACGGA+AGG | + | chr7_1:71725455-71725474 | Msa1035750:CDS | 45.0% |
| ATATTGCGGAGTTGAGGAAG+AGG | + | chr7_1:71725501-71725520 | Msa1035750:CDS | 45.0% | |
| !! | AGACGGGGATTTTGAGTGAT+AGG | + | chr7_1:71725528-71725547 | Msa1035750:CDS | 45.0% |
| !! | AGTGATTGTGGTGGATCTAG+TGG | + | chr7_1:71725617-71725636 | Msa1035750:CDS | 45.0% |
| TTTCGATGAGCTGTGTGATG+AGG | + | chr7_1:71725679-71725698 | Msa1035750:CDS | 45.0% | |
| GCTGTTGAATGAGTGGAAAC+AGG | + | chr7_1:71725727-71725746 | Msa1035750:CDS | 45.0% | |
| TCACATGGAGAGTGAAGGAA+AGG | + | chr7_1:71726428-71726447 | Msa1035750:intron | 45.0% | |
| !!! | GTTGGTTTTGTGCGACTAGA+AGG | - | chr7_1:71726533-71726552 | None:intergenic | 45.0% |
| ! | TCCAATTGTTGCTTCAACGC+TGG | + | chr7_1:71726553-71726572 | Msa1035750:intron | 45.0% |
| ! | TCCAGCGTTGAAGCAACAAT+TGG | - | chr7_1:71726557-71726576 | None:intergenic | 45.0% |
| ! | AATCAGGACTTAGGAGGCAT+TGG | + | chr7_1:71726619-71726638 | Msa1035750:intron | 45.0% |
| ATCACACCACAAAAGCAGAG+GGG | - | chr7_1:71726680-71726699 | None:intergenic | 45.0% | |
| GAATCACACCACAAAAGCAG+AGG | - | chr7_1:71726682-71726701 | None:intergenic | 45.0% | |
| ! | TAGTCGTTCCTTTCTAGTGG+AGG | + | chr7_1:71726714-71726733 | Msa1035750:intron | 45.0% |
| GCTCAAATCCTCCACTAGAA+AGG | - | chr7_1:71726725-71726744 | None:intergenic | 45.0% | |
| ! | TTTTGCACGGCAGAACTTCT+TGG | - | chr7_1:71726793-71726812 | None:intergenic | 45.0% |
| AAGAAGTTCTGCCGTGCAAA+AGG | + | chr7_1:71726792-71726811 | Msa1035750:intron | 45.0% | |
| CACCGTTTACAAGGATAAGG+TGG | - | chr7_1:71726887-71726906 | None:intergenic | 45.0% | |
| ! | GAGCACCGTTTACAAGGATA+AGG | - | chr7_1:71726890-71726909 | None:intergenic | 45.0% |
| ! | CAGTTTGAGCACCGTTTACA+AGG | - | chr7_1:71726896-71726915 | None:intergenic | 45.0% |
| CTTGTAAACGGTGCTCAAAC+TGG | + | chr7_1:71726894-71726913 | Msa1035750:intron | 45.0% | |
| TGCTGTGCAGACTACCTTAT+TGG | - | chr7_1:71726925-71726944 | None:intergenic | 45.0% | |
| !! | TGCTTAGCTTTGTAGCAGTG+GGG | + | chr7_1:71727360-71727379 | Msa1035750:intron | 45.0% |
| CGACCCCACTTAGTGAAATA+AGG | + | chr7_1:71727715-71727734 | Msa1035750:intron | 45.0% | |
| CTCAAATAACCAGCTAAGGG+AGG | - | chr7_1:71728499-71728518 | None:intergenic | 45.0% | |
| ATGTCTGACACCCATGACAT+AGG | - | chr7_1:71728524-71728543 | None:intergenic | 45.0% | |
| ! | GCATGTACTTCAGGTTCTTC+AGG | + | chr7_1:71728666-71728685 | Msa1035750:intron | 45.0% |
| TGATGGTTGACTGCTGTATG+AGG | + | chr7_1:71728713-71728732 | Msa1035750:CDS | 45.0% | |
| CTGTATGAGGCGAGATTATC+TGG | + | chr7_1:71728726-71728745 | Msa1035750:CDS | 45.0% | |
| CGATAGCCAGCCTGATATAA+TGG | - | chr7_1:71728762-71728781 | None:intergenic | 45.0% | |
| ATAGTAACACCGATAGGCCA+GGG | - | chr7_1:71728793-71728812 | None:intergenic | 45.0% | |
| CCAACCATAGTAACACCGAT+AGG | - | chr7_1:71728799-71728818 | None:intergenic | 45.0% | |
| !! | CCTATCGGTGTTACTATGGT+TGG | + | chr7_1:71728796-71728815 | Msa1035750:CDS | 45.0% |
| ! | ACTGCTTTAGATGGCAGTGT+CGG | - | chr7_1:71728949-71728968 | None:intergenic | 45.0% |
| GCAGAAGAGAGATTTAGTGG+GGG | + | chr7_1:71729015-71729034 | Msa1035750:CDS | 45.0% | |
| GAGAATCCGTGCAATGTATG+AGG | + | chr7_1:71729144-71729163 | Msa1035750:three_prime_UTR | 45.0% | |
| TGTTCGATTTCCACCCCATT+TGG | + | chr7_1:71729356-71729375 | Msa1035750:three_prime_UTR | 45.0% | |
| TGGGGTAACAAGACCAAATG+GGG | - | chr7_1:71729372-71729391 | None:intergenic | 45.0% | |
| !!! | ATTGTATATTTTATATTTTA+AGG | + | chr7_1:71726192-71726211 | Msa1035750:intron | 5.0% |
| CAATCCCTAGCCGAAGAAAC+CGG | + | chr7_1:71725080-71725099 | Msa1035750:CDS | 50.0% | |
| !! | TTTCTTGCCGCCGGTTTCTT+CGG | - | chr7_1:71725093-71725112 | None:intergenic | 50.0% |
| TGAGGTTGTTACGGTGGAGA+CGG | - | chr7_1:71725225-71725244 | None:intergenic | 50.0% | |
| !! | GGTTGATGAGGTTGTTACGG+TGG | - | chr7_1:71725231-71725250 | None:intergenic | 50.0% |
| !! | CTATGTTTTGTTCGTCGGGG+AGG | - | chr7_1:71725301-71725320 | None:intergenic | 50.0% |
| ! | CGGCGGATGACTTCTTGTTT+AGG | - | chr7_1:71725338-71725357 | None:intergenic | 50.0% |
| !!! | GTTTTAGAAACCGGAGACGG+CGG | - | chr7_1:71725355-71725374 | None:intergenic | 50.0% |
| TCTTCGCCGAATAACGTCAC+AGG | - | chr7_1:71725380-71725399 | None:intergenic | 50.0% | |
| TGCGTGATATTGCGGAGTTG+AGG | + | chr7_1:71725495-71725514 | Msa1035750:CDS | 50.0% | |
| GTTGAGGAAGAGGCAGAAGA+CGG | + | chr7_1:71725511-71725530 | Msa1035750:CDS | 50.0% | |
| TTGAGGAAGAGGCAGAAGAC+GGG | + | chr7_1:71725512-71725531 | Msa1035750:CDS | 50.0% | |
| !! | GATTGTGGTGGATCTAGTGG+TGG | + | chr7_1:71725620-71725639 | Msa1035750:CDS | 50.0% |
| GAAACAGGAGTTGCGTGAGA+TGG | + | chr7_1:71725742-71725761 | Msa1035750:CDS | 50.0% | |
| GACGGCTAAAGGGAAGTCTA+TGG | + | chr7_1:71725781-71725800 | Msa1035750:CDS | 50.0% | |
| GAGATGTAGAACTGGGCAAC+TGG | + | chr7_1:71727916-71727935 | Msa1035750:intron | 50.0% | |
| TCTTGTTAGAGTGGCCCTCT+TGG | + | chr7_1:71728160-71728179 | Msa1035750:intron | 50.0% | |
| GCATTCTAACCTCCCTTAGC+TGG | + | chr7_1:71728487-71728506 | Msa1035750:intron | 50.0% | |
| GGATGTGGTGCATGTACTTC+AGG | + | chr7_1:71728657-71728676 | Msa1035750:intron | 50.0% | |
| TCTTCAGGATGACATTCGGC+AGG | + | chr7_1:71728681-71728700 | Msa1035750:CDS | 50.0% | |
| TCGGCAGGCACTAATGTTGA+TGG | + | chr7_1:71728696-71728715 | Msa1035750:CDS | 50.0% | |
| GCGAGATTATCTGGCTGCAA+TGG | + | chr7_1:71728735-71728754 | Msa1035750:CDS | 50.0% | |
| CATAGTAACACCGATAGGCC+AGG | - | chr7_1:71728794-71728813 | None:intergenic | 50.0% | |
| !! | CTGGCCTATCGGTGTTACTA+TGG | + | chr7_1:71728792-71728811 | Msa1035750:CDS | 50.0% |
| ! | CTGCTTTAGATGGCAGTGTC+GGG | - | chr7_1:71728948-71728967 | None:intergenic | 50.0% |
| ! | AGTCAGTTCAGGCGCTGTTT+CGG | + | chr7_1:71729245-71729264 | Msa1035750:three_prime_UTR | 50.0% |
| GGTAACAAGACCAAATGGGG+TGG | - | chr7_1:71729369-71729388 | None:intergenic | 50.0% | |
| ! | CCATCTAGGGTTTCGGACGA+CGG | - | chr7_1:71725028-71725047 | None:intergenic | 55.0% |
| CGGTTTCTTCGGCTAGGGAT+TGG | - | chr7_1:71725082-71725101 | None:intergenic | 55.0% | |
| TGTTACGGTGGAGACGGTGT+CGG | - | chr7_1:71725219-71725238 | None:intergenic | 55.0% | |
| !! | GGAGGAAGCGTTGGTTGATG+AGG | - | chr7_1:71725243-71725262 | None:intergenic | 55.0% |
| AAGAAGTCATCCGCCGTCTC+CGG | + | chr7_1:71725342-71725361 | Msa1035750:CDS | 55.0% | |
| TGAGGAAGAGGCAGAAGACG+GGG | + | chr7_1:71725513-71725532 | Msa1035750:CDS | 55.0% | |
| GAGTGATAGGAAGCGGCAGA+AGG | + | chr7_1:71725541-71725560 | Msa1035750:CDS | 55.0% | |
| TGATAGGAAGCGGCAGAAGG+CGG | + | chr7_1:71725544-71725563 | Msa1035750:CDS | 55.0% | |
| ACAGGAGTTGCGTGAGATGG+CGG | + | chr7_1:71725745-71725764 | Msa1035750:CDS | 55.0% | |
| GTATCGCGCACACTGCTTGA+AGG | - | chr7_1:71725813-71725832 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7_1:71727709-71727728 | None:intergenic | 55.0% | |
| TGGGCAACTGGCGAACATCT+GGG | + | chr7_1:71727928-71727947 | Msa1035750:intron | 55.0% | |
| GCAATCAGTCGTCTGAGGAG+AGG | + | chr7_1:71729037-71729056 | Msa1035750:CDS | 55.0% | |
| AGTCGTCTGAGGAGAGGCTT+AGG | + | chr7_1:71729043-71729062 | Msa1035750:CDS | 55.0% | |
| ! | TAAAACCAAGGGGGGCGCAA+GGG | - | chr7_1:71729195-71729214 | None:intergenic | 55.0% |
| ! | TTAAAACCAAGGGGGGCGCA+AGG | - | chr7_1:71729196-71729215 | None:intergenic | 55.0% |
| TAGGGTTTCGGACGACGGTG+CGG | - | chr7_1:71725023-71725042 | None:intergenic | 60.0% | |
| CCGTCGTCCGAAACCCTAGA+TGG | + | chr7_1:71725025-71725044 | Msa1035750:exon | 60.0% | |
| TCCCTAGCCGAAGAAACCGG+CGG | + | chr7_1:71725083-71725102 | Msa1035750:CDS | 60.0% | |
| !! | GGAAGCGCTGGATGAAGCAG+CGG | - | chr7_1:71725279-71725298 | None:intergenic | 60.0% |
| !! | GAGGATGGTGCTGCTGAGGA+TGG | + | chr7_1:71725566-71725585 | Msa1035750:CDS | 60.0% |
| !! | GGTGCTGCTGAGGATGGTGA+TGG | + | chr7_1:71725572-71725591 | Msa1035750:CDS | 60.0% |
| !! | GCTGCTGAGGATGGTGATGG+TGG | + | chr7_1:71725575-71725594 | Msa1035750:CDS | 60.0% |
| !! | GAGGATGGTGATGGTGGTGC+TGG | + | chr7_1:71725581-71725600 | Msa1035750:CDS | 60.0% |
| !! | GTTGCGTGAGATGGCGGAGA+CGG | + | chr7_1:71725751-71725770 | Msa1035750:CDS | 60.0% |
| !! | AGATGGCGGAGACGGAGAAG+CGG | + | chr7_1:71725759-71725778 | Msa1035750:CDS | 60.0% |
| ACGGAGAAGCGGACGGCTAA+AGG | + | chr7_1:71725770-71725789 | Msa1035750:CDS | 60.0% | |
| CGGAGAAGCGGACGGCTAAA+GGG | + | chr7_1:71725771-71725790 | Msa1035750:CDS | 60.0% | |
| CGCTGGAGAGAACTGCAGAC+CGG | + | chr7_1:71726570-71726589 | Msa1035750:intron | 60.0% | |
| CTGGGCAACTGGCGAACATC+TGG | + | chr7_1:71727927-71727946 | Msa1035750:intron | 60.0% | |
| GGGCAACTGGCGAACATCTG+GGG | + | chr7_1:71727929-71727948 | Msa1035750:intron | 60.0% | |
| GGCAACTGGCGAACATCTGG+GGG | + | chr7_1:71727930-71727949 | Msa1035750:intron | 60.0% | |
| TGGCTATCGGGAATGCTCCC+TGG | + | chr7_1:71728773-71728792 | Msa1035750:CDS | 60.0% | |
| GGGAATGCTCCCTGGCCTAT+CGG | + | chr7_1:71728781-71728800 | Msa1035750:CDS | 60.0% | |
| TGGGGGCAATCAGTCGTCTG+AGG | + | chr7_1:71729032-71729051 | Msa1035750:CDS | 60.0% | |
| !! | GCCGCCGGTTTCTTCGGCTA+GGG | - | chr7_1:71725087-71725106 | None:intergenic | 65.0% |
| !! | TGCCGCCGGTTTCTTCGGCT+AGG | - | chr7_1:71725088-71725107 | None:intergenic | 65.0% |
| ! | TACGGTGGAGACGGTGTCGG+AGG | - | chr7_1:71725216-71725235 | None:intergenic | 65.0% |
| !! | GGTGACGGAGGAGGAAGCGT+TGG | - | chr7_1:71725252-71725271 | None:intergenic | 65.0% |
| TGAAGCAGCGGCGGAGGTGA+CGG | - | chr7_1:71725267-71725286 | None:intergenic | 65.0% | |
| ! | AGCGCTGGATGAAGCAGCGG+CGG | - | chr7_1:71725276-71725295 | None:intergenic | 65.0% |
| TAGGAAGCGGCAGAAGGCGG+AGG | + | chr7_1:71725547-71725566 | Msa1035750:CDS | 65.0% | |
| AAGCGGCAGAAGGCGGAGGA+TGG | + | chr7_1:71725551-71725570 | Msa1035750:CDS | 65.0% | |
| ACTGGCGAACATCTGGGGGC+AGG | + | chr7_1:71727934-71727953 | Msa1035750:intron | 65.0% | |
| CTGGCGAACATCTGGGGGCA+GGG | + | chr7_1:71727935-71727954 | Msa1035750:intron | 65.0% | |
| TGGCGAACATCTGGGGGCAG+GGG | + | chr7_1:71727936-71727955 | Msa1035750:intron | 65.0% | |
| ! | GCAGTGTCGGGTAACGCCGT+TGG | - | chr7_1:71728936-71728955 | None:intergenic | 65.0% |
| TTCGGACGACGGTGCGGTGG+TGG | - | chr7_1:71725017-71725036 | None:intergenic | 70.0% | |
| GGTTTCGGACGACGGTGCGG+TGG | - | chr7_1:71725020-71725039 | None:intergenic | 70.0% | |
| ! | GGTGGAGACGGTGTCGGAGG+TGG | - | chr7_1:71725213-71725232 | None:intergenic | 70.0% |
| GCTGGATGAAGCAGCGGCGG+AGG | - | chr7_1:71725273-71725292 | None:intergenic | 70.0% | |
| ! | TTCGTCGGGGAGGGAAGCGC+TGG | - | chr7_1:71725291-71725310 | None:intergenic | 70.0% |
| !! | GGCGGAGGATGGTGCTGCTG+AGG | + | chr7_1:71725562-71725581 | Msa1035750:CDS | 70.0% |
| GGCGGAGACGGAGAAGCGGA+CGG | + | chr7_1:71725763-71725782 | Msa1035750:CDS | 70.0% | |
| ! | GGACGACGGTGCGGTGGTGG+TGG | - | chr7_1:71725014-71725033 | None:intergenic | 75.0% |
| !! | AGCGGCGGAGGTGACGGAGG+AGG | - | chr7_1:71725261-71725280 | None:intergenic | 75.0% |
| ! | AGCAGCGGCGGAGGTGACGG+AGG | - | chr7_1:71725264-71725283 | None:intergenic | 75.0% |
| TGCAGCCCTTGCGCCCCCCT+TGG | + | chr7_1:71729187-71729206 | Msa1035750:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 71724937 | 71729425 | 71724937 | ID=Msa1035750;Name=Msa1035750 |
| chr7_1 | mRNA | 71724937 | 71729425 | 71724937 | ID=Msa1035750-mRNA-1;Parent=Msa1035750;Name=Msa1035750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=107|1|1|1|1|1|2|333|411 |
| chr7_1 | exon | 71724937 | 71725865 | 71724937 | ID=Msa1035750-mRNA-1:exon:17356;Parent=Msa1035750-mRNA-1 |
| chr7_1 | exon | 71728679 | 71729425 | 71728679 | ID=Msa1035750-mRNA-1:exon:17357;Parent=Msa1035750-mRNA-1 |
| chr7_1 | five_prime_UTR | 71724937 | 71725043 | 71724937 | ID=Msa1035750-mRNA-1:five_prime_utr;Parent=Msa1035750-mRNA-1 |
| chr7_1 | CDS | 71725044 | 71725865 | 71725044 | ID=Msa1035750-mRNA-1:cds;Parent=Msa1035750-mRNA-1 |
| chr7_1 | CDS | 71728679 | 71729092 | 71728679 | ID=Msa1035750-mRNA-1:cds;Parent=Msa1035750-mRNA-1 |
| chr7_1 | three_prime_UTR | 71729093 | 71729425 | 71729093 | ID=Msa1035750-mRNA-1:three_prime_utr;Parent=Msa1035750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
