Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115790 | XP_013470380.1 | 93.750 | 416 | 26 | 0 | 1 | 416 | 1 | 416 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115790 | sp|Q5R3Z8|FBXL2_PONAB | 30.960 | 323 | 219 | 4 | 94 | 415 | 90 | 409 | 7.84e-39 | 147 |
| Msa0115790 | sp|Q5R3Z8|FBXL2_PONAB | 30.068 | 296 | 197 | 4 | 78 | 371 | 132 | 419 | 2.46e-30 | 124 |
| Msa0115790 | sp|Q5R3Z8|FBXL2_PONAB | 28.837 | 215 | 126 | 4 | 208 | 398 | 49 | 260 | 1.65e-13 | 75.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115790 | I3SW78 | 93.750 | 416 | 26 | 0 | 1 | 416 | 1 | 416 | 0.0 | 783 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010110 | Msa0115790 | 0.814831 | 1.261115e-51 | -8.615850e-47 |
| Msa0012200 | Msa0115790 | 0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0020410 | Msa0115790 | 0.809132 | 2.200968e-50 | -8.615850e-47 |
| Msa0028620 | Msa0115790 | 0.823443 | 1.381354e-53 | -8.615850e-47 |
| Msa0032080 | Msa0115790 | 0.837084 | 6.402655e-57 | -8.615850e-47 |
| Msa0032100 | Msa0115790 | 0.849325 | 3.477000e-60 | -8.615850e-47 |
| Msa0032470 | Msa0115790 | 0.837073 | 6.445509e-57 | -8.615850e-47 |
| Msa0043980 | Msa0115790 | 0.828910 | 6.911604e-55 | -8.615850e-47 |
| Msa0044000 | Msa0115790 | 0.815666 | 8.226856e-52 | -8.615850e-47 |
| Msa0059840 | Msa0115790 | 0.838905 | 2.177530e-57 | -8.615850e-47 |
| Msa0072420 | Msa0115790 | 0.823277 | 1.510608e-53 | -8.615850e-47 |
| Msa0076290 | Msa0115790 | 0.824332 | 8.547483e-54 | -8.615850e-47 |
| Msa0079070 | Msa0115790 | 0.834306 | 3.235094e-56 | -8.615850e-47 |
| Msa0079370 | Msa0115790 | 0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0082420 | Msa0115790 | 0.802379 | 5.770390e-49 | -8.615850e-47 |
| Msa0083280 | Msa0115790 | 0.828739 | 7.603734e-55 | -8.615850e-47 |
| Msa0086420 | Msa0115790 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0090570 | Msa0115790 | 0.815117 | 1.089650e-51 | -8.615850e-47 |
| Msa0099910 | Msa0115790 | 0.804376 | 2.225279e-49 | -8.615850e-47 |
| Msa0101500 | Msa0115790 | -0.841735 | 3.966992e-58 | -8.615850e-47 |
| Msa0104670 | Msa0115790 | 0.825057 | 5.767088e-54 | -8.615850e-47 |
| Msa0108140 | Msa0115790 | 0.800649 | 1.305244e-48 | -8.615850e-47 |
| Msa0108760 | Msa0115790 | 0.843810 | 1.114574e-58 | -8.615850e-47 |
| Msa0115790 | Msa0123560 | 0.810235 | 1.274904e-50 | -8.615850e-47 |
| Msa0115790 | Msa0127650 | 0.808405 | 3.147512e-50 | -8.615850e-47 |
| Msa0115790 | Msa0127800 | 0.833437 | 5.335800e-56 | -8.615850e-47 |
| Msa0115790 | Msa0138020 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0115790 | Msa0139550 | -0.843957 | 1.017738e-58 | -8.615850e-47 |
| Msa0115790 | Msa0144530 | 0.802649 | 5.075150e-49 | -8.615850e-47 |
| Msa0115790 | Msa0148080 | 0.858489 | 7.956416e-63 | -8.615850e-47 |
| Msa0115790 | Msa0150230 | 0.806648 | 7.427335e-50 | -8.615850e-47 |
| Msa0115790 | Msa0150860 | 0.818571 | 1.828695e-52 | -8.615850e-47 |
| Msa0115790 | Msa0160960 | 0.805058 | 1.603607e-49 | -8.615850e-47 |
| Msa0115790 | Msa0172060 | 0.805995 | 1.019952e-49 | -8.615850e-47 |
| Msa0115790 | Msa0194080 | 0.805117 | 1.558643e-49 | -8.615850e-47 |
| Msa0115790 | Msa0204960 | 0.845025 | 5.251879e-59 | -8.615850e-47 |
| Msa0115790 | Msa0207040 | -0.809238 | 2.088490e-50 | -8.615850e-47 |
| Msa0115790 | Msa0217670 | 0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa0115790 | Msa0218370 | 0.826245 | 3.015076e-54 | -8.615850e-47 |
| Msa0115790 | Msa0219590 | 0.836423 | 9.440293e-57 | -8.615850e-47 |
| Msa0115790 | Msa0220400 | -0.808920 | 2.442955e-50 | -8.615850e-47 |
| Msa0115790 | Msa0230610 | 0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa0115790 | Msa0237300 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0115790 | Msa0240920 | 0.807229 | 5.598730e-50 | -8.615850e-47 |
| Msa0115790 | Msa0249860 | 0.831298 | 1.806770e-55 | -8.615850e-47 |
| Msa0115790 | Msa0257490 | 0.811777 | 5.909128e-51 | -8.615850e-47 |
| Msa0115790 | Msa0261090 | 0.849137 | 3.921303e-60 | -8.615850e-47 |
| Msa0115790 | Msa0269970 | 0.802726 | 4.892516e-49 | -8.615850e-47 |
| Msa0115790 | Msa0272300 | 0.836137 | 1.115997e-56 | -8.615850e-47 |
| Msa0115790 | Msa0274340 | 0.809775 | 1.601299e-50 | -8.615850e-47 |
| Msa0115790 | Msa0286670 | 0.806275 | 8.901396e-50 | -8.615850e-47 |
| Msa0115790 | Msa0287870 | 0.866763 | 2.247047e-65 | -8.615850e-47 |
| Msa0115790 | Msa0305410 | 0.825802 | 3.842890e-54 | -8.615850e-47 |
| Msa0115790 | Msa0316390 | 0.815167 | 1.061937e-51 | -8.615850e-47 |
| Msa0115790 | Msa0317940 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0115790 | Msa0318680 | 0.861756 | 8.204683e-64 | -8.615850e-47 |
| Msa0115790 | Msa0363790 | 0.813415 | 2.589236e-51 | -8.615850e-47 |
| Msa0115790 | Msa0374220 | 0.802022 | 6.831996e-49 | -8.615850e-47 |
| Msa0115790 | Msa0374340 | -0.807029 | 6.172164e-50 | -8.615850e-47 |
| Msa0115790 | Msa0376910 | 0.800129 | 1.665761e-48 | -8.615850e-47 |
| Msa0115790 | Msa0377290 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa0115790 | Msa0385500 | 0.808278 | 3.350370e-50 | -8.615850e-47 |
| Msa0115790 | Msa0395750 | 0.840388 | 8.962225e-58 | -8.615850e-47 |
| Msa0115790 | Msa0398670 | 0.830409 | 2.984918e-55 | -8.615850e-47 |
| Msa0115790 | Msa0404630 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa0115790 | Msa0425170 | 0.802722 | 4.902764e-49 | -8.615850e-47 |
| Msa0115790 | Msa0439980 | 0.803919 | 2.770254e-49 | -8.615850e-47 |
| Msa0115790 | Msa0454360 | 0.864776 | 9.532453e-65 | -8.615850e-47 |
| Msa0115790 | Msa0516790 | 0.835879 | 1.297707e-56 | -8.615850e-47 |
| Msa0115790 | Msa0525890 | 0.804812 | 1.804972e-49 | -8.615850e-47 |
| Msa0115790 | Msa0527540 | 0.890214 | 1.205624e-73 | -8.615850e-47 |
| Msa0115790 | Msa0530560 | 0.831692 | 1.444885e-55 | -8.615850e-47 |
| Msa0115790 | Msa0542290 | 0.806907 | 6.549694e-50 | -8.615850e-47 |
| Msa0115790 | Msa0542560 | 0.826152 | 3.173018e-54 | -8.615850e-47 |
| Msa0115790 | Msa0544840 | 0.814811 | 1.274036e-51 | -8.615850e-47 |
| Msa0115790 | Msa0545050 | 0.804044 | 2.609167e-49 | -8.615850e-47 |
| Msa0115790 | Msa0547160 | 0.826291 | 2.941074e-54 | -8.615850e-47 |
| Msa0115790 | Msa0566120 | -0.810317 | 1.224108e-50 | -8.615850e-47 |
| Msa0115790 | Msa0567350 | 0.817798 | 2.735247e-52 | -8.615850e-47 |
| Msa0115790 | Msa0589260 | -0.806851 | 6.729695e-50 | -8.615850e-47 |
| Msa0115790 | Msa0604290 | 0.852777 | 3.694682e-61 | -8.615850e-47 |
| Msa0115790 | Msa0611540 | -0.810539 | 1.096391e-50 | -8.615850e-47 |
| Msa0115790 | Msa0623990 | 0.812895 | 3.367531e-51 | -8.615850e-47 |
| Msa0115790 | Msa0624060 | 0.832687 | 8.198023e-56 | -8.615850e-47 |
| Msa0115790 | Msa0645530 | 0.810728 | 9.979999e-51 | -8.615850e-47 |
| Msa0115790 | Msa0651560 | 0.807794 | 4.246564e-50 | -8.615850e-47 |
| Msa0115790 | Msa0654310 | 0.801685 | 8.014285e-49 | -8.615850e-47 |
| Msa0115790 | Msa0656930 | 0.804044 | 2.609748e-49 | -8.615850e-47 |
| Msa0115790 | Msa0657930 | -0.818063 | 2.383689e-52 | -8.615850e-47 |
| Msa0115790 | Msa0665860 | 0.814487 | 1.502697e-51 | -8.615850e-47 |
| Msa0115790 | Msa0676130 | 0.838268 | 3.180869e-57 | -8.615850e-47 |
| Msa0115790 | Msa0676180 | 0.840557 | 8.095977e-58 | -8.615850e-47 |
| Msa0115790 | Msa0682680 | 0.803459 | 3.450850e-49 | -8.615850e-47 |
| Msa0115790 | Msa0685090 | 0.826568 | 2.526301e-54 | -8.615850e-47 |
| Msa0115790 | Msa0689320 | 0.803375 | 3.592623e-49 | -8.615850e-47 |
| Msa0115790 | Msa0741440 | 0.825452 | 4.652190e-54 | -8.615850e-47 |
| Msa0115790 | Msa0784480 | 0.806108 | 9.654430e-50 | -8.615850e-47 |
| Msa0115790 | Msa0796250 | 0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0115790 | Msa0818060 | 0.817891 | 2.606188e-52 | -8.615850e-47 |
| Msa0115790 | Msa0822500 | 0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0115790 | Msa0858390 | 0.827109 | 1.875672e-54 | -8.615850e-47 |
| Msa0115790 | Msa0878220 | 0.853978 | 1.671019e-61 | -8.615850e-47 |
| Msa0115790 | Msa0894710 | 0.828635 | 8.058340e-55 | -8.615850e-47 |
| Msa0115790 | Msa0910620 | 0.831010 | 2.126663e-55 | -8.615850e-47 |
| Msa0115790 | Msa0919860 | 0.821266 | 4.423189e-53 | -8.615850e-47 |
| Msa0115790 | Msa0943970 | 0.815079 | 1.110848e-51 | -8.615850e-47 |
| Msa0115790 | Msa0944020 | 0.837521 | 4.948707e-57 | -8.615850e-47 |
| Msa0115790 | Msa0985180 | 0.830544 | 2.766750e-55 | -8.615850e-47 |
| Msa0115790 | Msa0992510 | 0.819225 | 1.298644e-52 | -8.615850e-47 |
| Msa0115790 | Msa1028140 | 0.803661 | 3.134262e-49 | -8.615850e-47 |
| Msa0115790 | Msa1031660 | 0.840293 | 9.486419e-58 | -8.615850e-47 |
| Msa0115790 | Msa1035750 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
| Msa0115790 | Msa1036300 | 0.838492 | 2.784446e-57 | -8.615850e-47 |
| Msa0115790 | Msa1048070 | -0.815799 | 7.680607e-52 | -8.615850e-47 |
| Msa0115790 | Msa1070720 | 0.836651 | 8.259143e-57 | -8.615850e-47 |
| Msa0115790 | Msa1089460 | 0.811338 | 7.358268e-51 | -8.615850e-47 |
| Msa0115790 | Msa1117240 | 0.822652 | 2.112316e-53 | -8.615850e-47 |
| Msa0115790 | Msa1118860 | 0.800205 | 1.607692e-48 | -8.615850e-47 |
| Msa0115790 | Msa1122150 | 0.863287 | 2.772050e-64 | -8.615850e-47 |
| Msa0115790 | Msa1137780 | 0.830909 | 2.251572e-55 | -8.615850e-47 |
| Msa0115790 | Msa1140630 | 0.822026 | 2.951799e-53 | -8.615850e-47 |
| Msa0115790 | Msa1160560 | 0.874315 | 7.434388e-68 | -8.615850e-47 |
| Msa0115790 | Msa1184230 | 0.856213 | 3.745560e-62 | -8.615850e-47 |
| Msa0115790 | Msa1184910 | 0.830893 | 2.271667e-55 | -8.615850e-47 |
| Msa0115790 | Msa1211230 | -0.811696 | 6.152635e-51 | -8.615850e-47 |
| Msa0115790 | Msa1211420 | -0.808136 | 3.592666e-50 | -8.615850e-47 |
| Msa0115790 | Msa1213980 | 0.802468 | 5.530714e-49 | -8.615850e-47 |
| Msa0115790 | Msa1218620 | 0.807493 | 4.919973e-50 | -8.615850e-47 |
| Msa0115790 | Msa1236440 | 0.819126 | 1.368169e-52 | -8.615850e-47 |
| Msa0115790 | Msa1238840 | 0.802471 | 5.522385e-49 | -8.615850e-47 |
| Msa0115790 | Msa1239620 | 0.805279 | 1.441074e-49 | -8.615850e-47 |
| Msa0115790 | Msa1240970 | 0.810652 | 1.036263e-50 | -8.615850e-47 |
| Msa0115790 | Msa1246360 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0115790 | Msa1257750 | 0.817692 | 2.890846e-52 | -8.615850e-47 |
| Msa0115790 | Msa1271130 | 0.839193 | 1.834857e-57 | -8.615850e-47 |
| Msa0115790 | Msa1277670 | 0.820974 | 5.163806e-53 | -8.615850e-47 |
| Msa0115790 | Msa1282440 | 0.815623 | 8.407945e-52 | -8.615850e-47 |
| Msa0115790 | Msa1305660 | 0.803379 | 3.586154e-49 | -8.615850e-47 |
| Msa0115790 | Msa1305810 | 0.834567 | 2.782451e-56 | -8.615850e-47 |
| Msa0115790 | Msa1316360 | 0.802848 | 4.616459e-49 | -8.615850e-47 |
| Msa0115790 | Msa1325410 | -0.829948 | 3.867797e-55 | -8.615850e-47 |
| Msa0115790 | Msa1329200 | 0.849516 | 3.075329e-60 | -8.615850e-47 |
| Msa0115790 | Msa1331050 | -0.809729 | 1.638674e-50 | -8.615850e-47 |
| Msa0115790 | Msa1331320 | 0.810696 | 1.013770e-50 | -8.615850e-47 |
| Msa0115790 | Msa1336290 | 0.815048 | 1.128714e-51 | -8.615850e-47 |
| Msa0115790 | Msa1341060 | 0.841694 | 4.068433e-58 | -8.615850e-47 |
| Msa0115790 | Msa1342380 | 0.817113 | 3.901363e-52 | -8.615850e-47 |
| Msa0115790 | Msa1346840 | 0.846549 | 2.025615e-59 | -8.615850e-47 |
| Msa0115790 | Msa1352280 | -0.833652 | 4.715309e-56 | -8.615850e-47 |
| Msa0115790 | Msa1357560 | 0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa0115790 | Msa1364350 | -0.825449 | 4.658584e-54 | -8.615850e-47 |
| Msa0115790 | Msa1373160 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
| Msa0115790 | Msa1378410 | 0.830410 | 2.982803e-55 | -8.615850e-47 |
| Msa0115790 | Msa1392980 | 0.851540 | 8.302940e-61 | -8.615850e-47 |
| Msa0115790 | Msa1401990 | 0.842350 | 2.728534e-58 | -8.615850e-47 |
| Msa0115790 | Msa1407760 | 0.810311 | 1.227691e-50 | -8.615850e-47 |
| Msa0115790 | Msa1419690 | 0.827156 | 1.827894e-54 | -8.615850e-47 |
| Msa0115790 | Msa1419840 | 0.837829 | 4.126960e-57 | -8.615850e-47 |
| Msa0115790 | Msa1434420 | -0.842143 | 3.094770e-58 | -8.615850e-47 |
| Msa0115790 | Msa1437730 | 0.809851 | 1.542390e-50 | -8.615850e-47 |
| Msa0115790 | Msa1442920 | 0.868145 | 8.115776e-66 | -8.615850e-47 |
| Msa0115790 | Msa1452710 | 0.852166 | 5.516418e-61 | -8.615850e-47 |
| Msa0115790 | Msa1457620 | 0.844030 | 9.728664e-59 | -8.615850e-47 |
| Msa0115790 | Msa1458290 | 0.802025 | 6.823855e-49 | -8.615850e-47 |
| Msa0115790 | Msa1458680 | 0.858526 | 7.752621e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115790 | MtrunA17_Chr1g0212071 | 93.750 | 416 | 26 | 0 | 1 | 416 | 1 | 416 | 0.0 | 783 |
| Msa0115790 | MtrunA17_Chr7g0217301 | 83.333 | 78 | 13 | 0 | 313 | 390 | 48 | 125 | 2.08e-38 | 135 |
| Msa0115790 | MtrunA17_Chr7g0217301 | 44.516 | 155 | 55 | 3 | 1 | 153 | 1 | 126 | 1.17e-23 | 96.3 |
| Msa0115790 | MtrunA17_Chr2g0286991 | 28.101 | 395 | 261 | 11 | 16 | 394 | 7 | 394 | 4.73e-34 | 134 |
| Msa0115790 | MtrunA17_Chr2g0286991 | 30.395 | 329 | 199 | 6 | 91 | 394 | 200 | 523 | 1.84e-33 | 132 |
| Msa0115790 | MtrunA17_Chr2g0286991 | 33.117 | 308 | 199 | 5 | 98 | 403 | 282 | 584 | 2.89e-33 | 131 |
| Msa0115790 | MtrunA17_Chr2g0286991 | 29.952 | 207 | 143 | 2 | 95 | 301 | 385 | 589 | 6.35e-18 | 85.9 |
| Msa0115790 | MtrunA17_Chr2g0286991 | 35.556 | 135 | 86 | 1 | 87 | 221 | 455 | 588 | 5.77e-11 | 64.3 |
| Msa0115790 | MtrunA17_Chr8g0347711 | 27.660 | 376 | 210 | 4 | 20 | 349 | 15 | 374 | 5.68e-34 | 130 |
| Msa0115790 | MtrunA17_Chr7g0272131 | 25.592 | 422 | 251 | 10 | 20 | 390 | 49 | 458 | 1.57e-27 | 115 |
| Msa0115790 | MtrunA17_Chr7g0272131 | 26.774 | 310 | 188 | 6 | 101 | 406 | 328 | 602 | 1.87e-24 | 105 |
| Msa0115790 | MtrunA17_Chr7g0272131 | 25.828 | 302 | 192 | 6 | 95 | 371 | 350 | 644 | 4.43e-19 | 89.7 |
| Msa0115790 | MtrunA17_Chr4g0004901 | 26.147 | 436 | 244 | 14 | 18 | 396 | 62 | 476 | 1.78e-27 | 115 |
| Msa0115790 | MtrunA17_Chr4g0004901 | 30.075 | 266 | 158 | 6 | 95 | 336 | 367 | 628 | 4.24e-24 | 105 |
| Msa0115790 | MtrunA17_Chr4g0004901 | 26.176 | 340 | 216 | 9 | 94 | 406 | 288 | 619 | 2.10e-22 | 99.8 |
| Msa0115790 | MtrunA17_Chr4g0063841 | 26.303 | 422 | 274 | 10 | 18 | 407 | 62 | 478 | 1.98e-26 | 111 |
| Msa0115790 | MtrunA17_Chr4g0063841 | 27.740 | 292 | 205 | 6 | 103 | 391 | 332 | 620 | 6.30e-19 | 89.0 |
| Msa0115790 | MtrunA17_Chr4g0063841 | 31.122 | 196 | 131 | 4 | 94 | 286 | 428 | 622 | 1.37e-15 | 79.0 |
| Msa0115790 | MtrunA17_Chr1g0159531 | 31.159 | 276 | 161 | 6 | 66 | 328 | 79 | 338 | 3.99e-24 | 102 |
| Msa0115790 | MtrunA17_Chr1g0159531 | 32.710 | 214 | 129 | 4 | 146 | 346 | 102 | 313 | 4.66e-21 | 93.6 |
| Msa0115790 | MtrunA17_Chr1g0149351 | 25.059 | 427 | 279 | 9 | 18 | 407 | 66 | 488 | 4.61e-24 | 104 |
| Msa0115790 | MtrunA17_Chr1g0149351 | 25.526 | 333 | 216 | 5 | 95 | 397 | 306 | 636 | 1.19e-22 | 100 |
| Msa0115790 | MtrunA17_Chr1g0149351 | 27.273 | 352 | 213 | 8 | 94 | 410 | 175 | 518 | 3.29e-22 | 99.0 |
| Msa0115790 | MtrunA17_Chr3g0137771 | 26.615 | 387 | 259 | 11 | 18 | 391 | 69 | 443 | 1.08e-23 | 103 |
| Msa0115790 | MtrunA17_Chr3g0137771 | 27.723 | 303 | 155 | 6 | 90 | 332 | 325 | 623 | 5.44e-17 | 83.2 |
| Msa0115790 | MtrunA17_Chr3g0137771 | 24.415 | 299 | 195 | 5 | 95 | 390 | 304 | 574 | 2.60e-16 | 81.3 |
| Msa0115790 | MtrunA17_Chr3g0137771 | 28.409 | 176 | 123 | 3 | 113 | 286 | 456 | 630 | 3.83e-13 | 71.2 |
| Msa0115790 | MtrunA17_Chr3g0125671 | 31.797 | 217 | 130 | 5 | 146 | 346 | 114 | 328 | 6.79e-22 | 96.3 |
| Msa0115790 | MtrunA17_Chr3g0125671 | 27.469 | 324 | 203 | 7 | 25 | 323 | 47 | 363 | 1.41e-20 | 92.4 |
| Msa0115790 | MtrunA17_Chr1g0176031 | 27.402 | 281 | 191 | 7 | 107 | 381 | 78 | 351 | 7.17e-20 | 90.1 |
| Msa0115790 | MtrunA17_Chr1g0176031 | 27.059 | 255 | 155 | 3 | 84 | 309 | 81 | 333 | 7.38e-20 | 90.1 |
| Msa0115790 | MtrunA17_Chr4g0070541 | 26.592 | 267 | 184 | 8 | 95 | 357 | 411 | 669 | 4.84e-17 | 83.6 |
| Msa0115790 | MtrunA17_Chr4g0070541 | 33.514 | 185 | 118 | 3 | 162 | 341 | 369 | 553 | 1.11e-16 | 82.4 |
| Msa0115790 | MtrunA17_Chr4g0070541 | 30.846 | 201 | 131 | 4 | 75 | 273 | 470 | 664 | 2.89e-12 | 68.6 |
| Msa0115790 | MtrunA17_Chr4g0070541 | 26.718 | 262 | 184 | 6 | 133 | 391 | 397 | 653 | 8.34e-11 | 63.9 |
| Msa0115790 | MtrunA17_Chr4g0053361 | 25.837 | 418 | 259 | 14 | 6 | 386 | 32 | 435 | 3.06e-16 | 80.5 |
| Msa0115790 | MtrunA17_Chr4g0063861 | 29.949 | 197 | 134 | 4 | 94 | 287 | 185 | 380 | 2.98e-15 | 77.0 |
| Msa0115790 | MtrunA17_Chr4g0063861 | 22.796 | 329 | 195 | 6 | 113 | 385 | 46 | 371 | 1.78e-14 | 74.7 |
| Msa0115790 | MtrunA17_Chr3g0079141 | 24.286 | 420 | 261 | 13 | 3 | 393 | 47 | 438 | 1.03e-14 | 75.9 |
| Msa0115790 | MtrunA17_Chr1g0152951 | 23.961 | 409 | 190 | 13 | 23 | 346 | 66 | 438 | 1.89e-14 | 75.1 |
| Msa0115790 | MtrunA17_Chr3g0092191 | 33.533 | 167 | 106 | 3 | 164 | 325 | 19 | 185 | 2.05e-14 | 71.2 |
| Msa0115790 | MtrunA17_Chr3g0092201 | 33.533 | 167 | 106 | 3 | 164 | 325 | 19 | 185 | 2.05e-14 | 71.2 |
| Msa0115790 | MtrunA17_Chr4g0018891 | 26.076 | 395 | 248 | 18 | 20 | 393 | 82 | 453 | 2.92e-14 | 74.3 |
| Msa0115790 | MtrunA17_Chr4g0018891 | 29.167 | 216 | 124 | 6 | 81 | 270 | 252 | 464 | 3.76e-12 | 67.8 |
| Msa0115790 | MtrunA17_Chr4g0070521 | 27.174 | 276 | 181 | 8 | 95 | 357 | 42 | 310 | 4.95e-14 | 72.8 |
| Msa0115790 | MtrunA17_Chr4g0070521 | 30.769 | 195 | 116 | 5 | 164 | 341 | 2 | 194 | 1.56e-11 | 65.1 |
| Msa0115790 | MtrunA17_Chr4g0070521 | 26.838 | 272 | 179 | 8 | 133 | 390 | 28 | 293 | 5.52e-11 | 63.5 |
| Msa0115790 | MtrunA17_Chr4g0011101 | 21.986 | 423 | 263 | 12 | 39 | 403 | 38 | 451 | 1.66e-13 | 72.0 |
| Msa0115790 | MtrunA17_Chr3g0140831 | 27.962 | 211 | 138 | 5 | 173 | 379 | 295 | 495 | 1.21e-12 | 69.7 |
| Msa0115790 | MtrunA17_Chr4g0073771 | 26.538 | 260 | 152 | 7 | 20 | 245 | 12 | 266 | 2.62e-12 | 67.4 |
| Msa0115790 | MtrunA17_Chr3g0140021 | 26.531 | 245 | 129 | 5 | 43 | 239 | 24 | 265 | 3.08e-12 | 67.0 |
| Msa0115790 | MtrunA17_Chr1g0150971 | 24.830 | 294 | 179 | 9 | 135 | 405 | 361 | 635 | 1.08e-11 | 67.0 |
| Msa0115790 | MtrunA17_Chr1g0150971 | 24.211 | 380 | 193 | 14 | 110 | 414 | 435 | 794 | 6.45e-11 | 64.7 |
| Msa0115790 | MtrunA17_Chr2g0300611 | 26.923 | 260 | 168 | 10 | 95 | 343 | 416 | 664 | 3.08e-11 | 65.5 |
| Msa0115790 | MtrunA17_Chr1g0211631 | 23.699 | 346 | 232 | 9 | 95 | 414 | 231 | 570 | 4.86e-11 | 64.7 |
| Msa0115790 | MtrunA17_Chr2g0285641 | 30.769 | 156 | 99 | 5 | 96 | 246 | 112 | 263 | 4.90e-11 | 63.5 |
| Msa0115790 | MtrunA17_Chr4g0002461 | 26.619 | 278 | 181 | 8 | 20 | 286 | 33 | 298 | 5.12e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115790 | AT5G23340.1 | 71.921 | 406 | 113 | 1 | 11 | 416 | 1 | 405 | 0.0 | 590 |
| Msa0115790 | AT4G15475.1 | 33.119 | 311 | 201 | 4 | 95 | 403 | 279 | 584 | 7.05e-38 | 145 |
| Msa0115790 | AT4G15475.1 | 29.618 | 314 | 214 | 5 | 85 | 398 | 221 | 527 | 1.10e-31 | 127 |
| Msa0115790 | AT4G15475.1 | 24.788 | 472 | 256 | 12 | 16 | 394 | 7 | 472 | 4.64e-24 | 105 |
| Msa0115790 | AT4G15475.1 | 31.073 | 177 | 95 | 3 | 94 | 244 | 410 | 585 | 1.72e-14 | 75.9 |
| Msa0115790 | AT4G15475.1 | 36.066 | 122 | 77 | 1 | 101 | 221 | 467 | 588 | 2.69e-11 | 65.9 |
| Msa0115790 | AT3G07550.1 | 27.895 | 380 | 205 | 10 | 20 | 349 | 18 | 378 | 6.30e-29 | 117 |
| Msa0115790 | AT3G07550.2 | 27.895 | 380 | 205 | 10 | 20 | 349 | 18 | 378 | 6.30e-29 | 117 |
| Msa0115790 | AT3G07550.3 | 28.375 | 363 | 198 | 9 | 20 | 349 | 18 | 351 | 3.29e-28 | 114 |
| Msa0115790 | AT2G25490.1 | 26.526 | 426 | 263 | 10 | 18 | 407 | 65 | 476 | 1.05e-27 | 115 |
| Msa0115790 | AT2G25490.1 | 25.886 | 367 | 203 | 10 | 85 | 391 | 258 | 615 | 9.03e-21 | 95.1 |
| Msa0115790 | AT5G01720.1 | 27.103 | 321 | 204 | 5 | 94 | 390 | 238 | 552 | 1.22e-27 | 115 |
| Msa0115790 | AT5G01720.1 | 24.105 | 419 | 204 | 9 | 37 | 379 | 34 | 414 | 8.48e-22 | 98.2 |
| Msa0115790 | AT5G01720.1 | 25.253 | 297 | 164 | 5 | 95 | 367 | 316 | 578 | 6.75e-17 | 83.2 |
| Msa0115790 | AT5G01720.1 | 36.806 | 144 | 88 | 3 | 118 | 261 | 441 | 581 | 8.92e-17 | 83.2 |
| Msa0115790 | AT3G58530.1 | 30.350 | 257 | 170 | 6 | 107 | 359 | 80 | 331 | 1.20e-26 | 110 |
| Msa0115790 | AT3G58530.1 | 31.351 | 185 | 123 | 4 | 95 | 278 | 150 | 331 | 2.33e-15 | 77.4 |
| Msa0115790 | AT3G58530.1 | 26.978 | 278 | 164 | 6 | 68 | 309 | 61 | 335 | 4.17e-15 | 76.6 |
| Msa0115790 | AT1G77000.2 | 34.066 | 182 | 115 | 3 | 121 | 301 | 104 | 281 | 9.65e-24 | 102 |
| Msa0115790 | AT1G77000.2 | 30.147 | 272 | 160 | 6 | 71 | 318 | 85 | 350 | 4.28e-22 | 97.4 |
| Msa0115790 | AT1G77000.2 | 27.823 | 248 | 173 | 6 | 131 | 374 | 60 | 305 | 4.55e-20 | 91.3 |
| Msa0115790 | AT1G77000.2 | 31.443 | 194 | 108 | 3 | 60 | 234 | 127 | 314 | 4.82e-17 | 82.4 |
| Msa0115790 | AT1G77000.1 | 34.066 | 182 | 115 | 3 | 121 | 301 | 104 | 281 | 9.65e-24 | 102 |
| Msa0115790 | AT1G77000.1 | 30.147 | 272 | 160 | 6 | 71 | 318 | 85 | 350 | 4.28e-22 | 97.4 |
| Msa0115790 | AT1G77000.1 | 27.823 | 248 | 173 | 6 | 131 | 374 | 60 | 305 | 4.55e-20 | 91.3 |
| Msa0115790 | AT1G77000.1 | 31.443 | 194 | 108 | 3 | 60 | 234 | 127 | 314 | 4.82e-17 | 82.4 |
| Msa0115790 | AT5G27920.1 | 27.397 | 292 | 196 | 7 | 113 | 401 | 330 | 608 | 6.74e-23 | 101 |
| Msa0115790 | AT5G27920.1 | 26.648 | 364 | 230 | 8 | 78 | 414 | 221 | 574 | 9.25e-22 | 98.2 |
| Msa0115790 | AT1G21410.2 | 28.881 | 277 | 167 | 5 | 71 | 323 | 85 | 355 | 2.02e-22 | 98.2 |
| Msa0115790 | AT1G21410.2 | 28.761 | 226 | 150 | 6 | 118 | 341 | 55 | 271 | 2.46e-18 | 86.3 |
| Msa0115790 | AT1G21410.1 | 28.881 | 277 | 167 | 5 | 71 | 323 | 85 | 355 | 2.02e-22 | 98.2 |
| Msa0115790 | AT1G21410.1 | 28.761 | 226 | 150 | 6 | 118 | 341 | 55 | 271 | 2.46e-18 | 86.3 |
| Msa0115790 | AT5G25350.1 | 25.132 | 378 | 259 | 8 | 18 | 386 | 56 | 418 | 2.03e-19 | 90.9 |
| Msa0115790 | AT5G25350.1 | 23.284 | 408 | 203 | 9 | 93 | 391 | 204 | 610 | 7.90e-17 | 83.2 |
| Msa0115790 | AT5G25350.1 | 27.211 | 294 | 154 | 7 | 119 | 406 | 120 | 359 | 1.96e-16 | 82.0 |
| Msa0115790 | AT5G25350.1 | 25.574 | 305 | 167 | 8 | 94 | 339 | 309 | 612 | 1.96e-12 | 69.3 |
| Msa0115790 | AT1G77000.3 | 34.043 | 141 | 92 | 1 | 87 | 226 | 96 | 236 | 4.42e-16 | 78.2 |
| Msa0115790 | AT1G77000.3 | 35.385 | 130 | 82 | 2 | 121 | 249 | 104 | 232 | 8.62e-16 | 77.4 |
| Msa0115790 | AT1G77000.3 | 33.588 | 131 | 85 | 2 | 146 | 275 | 103 | 232 | 1.10e-12 | 68.2 |
| Msa0115790 | AT1G77000.3 | 28.788 | 198 | 109 | 5 | 165 | 360 | 69 | 236 | 1.59e-11 | 64.7 |
| Msa0115790 | AT1G77000.4 | 34.043 | 141 | 92 | 1 | 87 | 226 | 96 | 236 | 4.42e-16 | 78.2 |
| Msa0115790 | AT1G77000.4 | 35.385 | 130 | 82 | 2 | 121 | 249 | 104 | 232 | 8.62e-16 | 77.4 |
| Msa0115790 | AT1G77000.4 | 33.588 | 131 | 85 | 2 | 146 | 275 | 103 | 232 | 1.10e-12 | 68.2 |
| Msa0115790 | AT1G77000.4 | 28.788 | 198 | 109 | 5 | 165 | 360 | 69 | 236 | 1.59e-11 | 64.7 |
| Msa0115790 | AT4G07400.1 | 26.107 | 429 | 247 | 17 | 23 | 394 | 79 | 494 | 5.22e-15 | 77.4 |
| Msa0115790 | AT1G55590.1 | 25.540 | 278 | 171 | 8 | 121 | 391 | 265 | 513 | 8.14e-15 | 77.0 |
| Msa0115790 | AT1G55590.1 | 25.733 | 307 | 195 | 9 | 78 | 361 | 246 | 542 | 2.61e-12 | 68.9 |
| Msa0115790 | AT5G51380.1 | 25.654 | 382 | 250 | 14 | 28 | 393 | 75 | 438 | 9.55e-15 | 76.3 |
| Msa0115790 | AT1G80570.1 | 27.928 | 333 | 213 | 8 | 18 | 325 | 2 | 332 | 2.44e-14 | 75.1 |
| Msa0115790 | AT1G80570.3 | 27.928 | 333 | 213 | 8 | 18 | 325 | 2 | 332 | 2.44e-14 | 75.1 |
| Msa0115790 | AT1G80570.2 | 27.928 | 333 | 213 | 8 | 18 | 325 | 15 | 345 | 3.34e-14 | 74.7 |
| Msa0115790 | AT5G51370.2 | 28.980 | 245 | 163 | 8 | 95 | 334 | 159 | 397 | 4.46e-14 | 73.9 |
| Msa0115790 | AT2G06040.1 | 32.843 | 204 | 124 | 7 | 110 | 307 | 538 | 734 | 6.27e-14 | 74.3 |
| Msa0115790 | AT1G47056.1 | 24.711 | 433 | 208 | 16 | 8 | 359 | 31 | 426 | 1.62e-13 | 72.8 |
| Msa0115790 | AT2G17020.2 | 27.972 | 286 | 185 | 7 | 121 | 390 | 72 | 352 | 3.95e-13 | 71.2 |
| Msa0115790 | AT2G17020.3 | 27.972 | 286 | 185 | 7 | 121 | 390 | 213 | 493 | 4.04e-13 | 71.6 |
| Msa0115790 | AT2G17020.1 | 27.972 | 286 | 185 | 7 | 121 | 390 | 246 | 526 | 8.58e-13 | 70.5 |
| Msa0115790 | AT5G21900.1 | 32.667 | 150 | 100 | 1 | 113 | 262 | 367 | 515 | 9.38e-13 | 70.5 |
| Msa0115790 | AT4G33210.1 | 25.436 | 287 | 176 | 10 | 135 | 398 | 370 | 641 | 5.07e-12 | 68.6 |
| Msa0115790 | AT4G33210.1 | 26.061 | 330 | 202 | 10 | 83 | 403 | 685 | 981 | 2.92e-11 | 66.2 |
| Msa0115790 | AT1G80630.1 | 23.729 | 236 | 147 | 4 | 94 | 302 | 279 | 508 | 6.87e-12 | 67.8 |
| Msa0115790 | AT5G51370.1 | 31.683 | 202 | 128 | 7 | 95 | 291 | 159 | 355 | 3.40e-11 | 64.7 |
Find 116 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACGACGCAATAAAGTTTC+TGG | 0.239773 | 1_3:-34708512 | Msa0115790:CDS |
| TTGCGGATATTGCATCTTAC+TGG | 0.249601 | 1_3:-34708865 | Msa0115790:CDS |
| ACCTCACATGCTTCGTAAAA+TGG | 0.250421 | 1_3:-34709918 | Msa0115790:CDS |
| GATCTCGCTGTTATTGCTAA+TGG | 0.255740 | 1_3:-34709815 | Msa0115790:CDS |
| AAATAATCATGCTCACTTAC+AGG | 0.272801 | 1_3:+34707823 | None:intergenic |
| ATAAGTGAACTTTCTTGATA+TGG | 0.277823 | 1_3:-34708062 | Msa0115790:three_prime_UTR |
| CGACGAGCTTCGTTCGATTC+TGG | 0.287693 | 1_3:-34710044 | Msa0115790:CDS |
| AACCCTAACCCCAACGATTT+GGG | 0.289694 | 1_3:+34710149 | None:intergenic |
| CTTTGATCATTGGTGGTTGC+CGG | 0.293733 | 1_3:-34708543 | Msa0115790:CDS |
| ATCTCGCTGTTATTGCTAAT+GGG | 0.304684 | 1_3:-34709814 | Msa0115790:CDS |
| GATTATTTCTTTAATTTAGA+AGG | 0.310411 | 1_3:-34707808 | Msa0115790:three_prime_UTR |
| CCTTGCAAAAGTCAGGTAAA+TGG | 0.311062 | 1_3:+34708164 | None:intergenic |
| GAATTTAGCCAACGATAATA+TGG | 0.315400 | 1_3:+34708582 | None:intergenic |
| AAACCCTAACCCCAACGATT+TGG | 0.324107 | 1_3:+34710148 | None:intergenic |
| TGTTAGATTGCAACAAAGTT+GGG | 0.324521 | 1_3:-34708612 | Msa0115790:CDS |
| ATACCAACCACTGTGATCTT+TGG | 0.325643 | 1_3:+34708280 | None:intergenic |
| AAAATCTTCAAACTCAAATC+AGG | 0.328179 | 1_3:+34708319 | None:intergenic |
| CACATCCAAGGACTGTAATA+AGG | 0.340648 | 1_3:+34708948 | None:intergenic |
| TGCGGAAAGCTTCTTCCTTT+CGG | 0.341317 | 1_3:+34709949 | None:intergenic |
| TGCATCTTCTGAAGTTGAAT+TGG | 0.346452 | 1_3:+34710102 | None:intergenic |
| ATAATAATTTACAGGAATTA+CGG | 0.349577 | 1_3:-34709004 | Msa0115790:intron |
| AGCCCCAAATCGTTGGGGTT+AGG | 0.364183 | 1_3:-34710152 | Msa0115790:five_prime_UTR |
| GTCACTTCACAAATTTGTAT+TGG | 0.369038 | 1_3:-34707859 | Msa0115790:three_prime_UTR |
| GGCTAAATTCTGTGATAATC+TGG | 0.376470 | 1_3:-34708569 | Msa0115790:CDS |
| GCCCCAAATCGTTGGGGTTA+GGG | 0.377928 | 1_3:-34710151 | Msa0115790:five_prime_UTR |
| AAAATTAGCCCCAAATCGTT+GGG | 0.378032 | 1_3:-34710158 | Msa0115790:five_prime_UTR |
| AGACAAGGAAACGTTTGGTT+TGG | 0.404540 | 1_3:-34710002 | Msa0115790:CDS |
| ATGCATAAACGAAGCATTAA+CGG | 0.407146 | 1_3:-34710068 | Msa0115790:CDS |
| ATCTCACATCCAAGTATTCC+AGG | 0.407256 | 1_3:+34708230 | None:intergenic |
| TCTTTCCTTATTACAGTCCT+TGG | 0.411987 | 1_3:-34708953 | Msa0115790:CDS |
| GCAGTAATGTCACTGACGTT+GGG | 0.415773 | 1_3:-34708684 | Msa0115790:CDS |
| GGCGGATAGGTTCACATGCT+TGG | 0.425899 | 1_3:-34709897 | Msa0115790:CDS |
| TTTACAGGAATTACGGATGT+TGG | 0.428101 | 1_3:-34708997 | Msa0115790:intron |
| ATGCAGTTACCTGGAATACT+TGG | 0.430989 | 1_3:-34708239 | Msa0115790:CDS |
| TGCAGAAAGTTGACCGATAA+GGG | 0.431000 | 1_3:-34708919 | Msa0115790:CDS |
| CCGCAAGTCACAACAGCCTT+TGG | 0.431251 | 1_3:+34708882 | None:intergenic |
| GTTTCTCGTTCGTTCTATCC+TGG | 0.433887 | 1_3:-34709851 | Msa0115790:CDS |
| AAGATCACAGTGGTTGGTAT+AGG | 0.435567 | 1_3:-34708277 | Msa0115790:CDS |
| TACTGGGTGCAGATTTGTTA+CGG | 0.445534 | 1_3:-34708848 | Msa0115790:CDS |
| TTTGCAAGCACATTTGTGTT+CGG | 0.446711 | 1_3:-34707895 | Msa0115790:three_prime_UTR |
| TGGTTTGCAAGCGATGGCTT+CGG | 0.452736 | 1_3:-34709982 | Msa0115790:CDS |
| TTGTTAGATTGCAACAAAGT+TGG | 0.452825 | 1_3:-34708613 | Msa0115790:CDS |
| TGAGGAGAATTTATCAGTCC+TGG | 0.454418 | 1_3:-34708023 | Msa0115790:three_prime_UTR |
| TGGGGTTTCGAGTATTTGTA+AGG | 0.455772 | 1_3:-34708665 | Msa0115790:CDS |
| CTGCAGAAAGTTGACCGATA+AGG | 0.456570 | 1_3:-34708920 | Msa0115790:CDS |
| CTCAATTTGCATAACTGTAA+AGG | 0.456727 | 1_3:-34709773 | Msa0115790:intron |
| AACAGCGGACAATCCCTTAT+CGG | 0.460958 | 1_3:+34708906 | None:intergenic |
| CTTTACAGTTATGCAAATTG+AGG | 0.464854 | 1_3:+34709774 | None:intergenic |
| AAATTAACCTTGCAAAAGTC+AGG | 0.466332 | 1_3:+34708157 | None:intergenic |
| GTTGAATTGGAAGACATTGA+AGG | 0.469396 | 1_3:+34710115 | None:intergenic |
| TTTACGAAGCATGTGAGGTC+CGG | 0.473276 | 1_3:+34709922 | None:intergenic |
| ATCACTGTGCTGATTGGCGT+TGG | 0.475919 | 1_3:-34707959 | Msa0115790:three_prime_UTR |
| AGGCTGGCCTTTGTAATATG+TGG | 0.481605 | 1_3:+34708202 | None:intergenic |
| TGTCTAAATACTTGATCCGT+TGG | 0.483760 | 1_3:+34708716 | None:intergenic |
| TTGGTTTGGTTTGCAAGCGA+TGG | 0.484765 | 1_3:-34709988 | Msa0115790:CDS |
| CTAATGGGTTTAGATGTTTG+AGG | 0.485032 | 1_3:-34709799 | Msa0115790:CDS |
| CTGTCGTAATTTAGAAGAGT+TGG | 0.486468 | 1_3:-34708797 | Msa0115790:CDS |
| CTGGAGACTTTGATCATTGG+TGG | 0.487556 | 1_3:-34708550 | Msa0115790:CDS |
| ATGCAGAAACCTTGAGGCGC+TGG | 0.488076 | 1_3:-34708401 | Msa0115790:CDS |
| AACCTTGAGGCGCTGGACAT+TGG | 0.495632 | 1_3:-34708394 | Msa0115790:CDS |
| TTTGATCATTGGTGGTTGCC+GGG | 0.505872 | 1_3:-34708542 | Msa0115790:CDS |
| GGCATGTCTTTAGAAATTTG+AGG | 0.510032 | 1_3:-34708041 | Msa0115790:three_prime_UTR |
| TGCGGATATTGCATCTTACT+GGG | 0.514273 | 1_3:-34708864 | Msa0115790:CDS |
| TGTGGGTAAATGCAGTTACC+TGG | 0.518718 | 1_3:-34708248 | Msa0115790:CDS |
| ATGTCTATCACTGTGCTGAT+TGG | 0.521717 | 1_3:-34707965 | Msa0115790:three_prime_UTR |
| AATCTGGAGACTTTGATCAT+TGG | 0.521970 | 1_3:-34708553 | Msa0115790:CDS |
| GATGTTGGAATGAAAGCTAT+TGG | 0.522977 | 1_3:-34708982 | Msa0115790:CDS |
| CAGAAACTTTATTGCGTCGT+CGG | 0.532600 | 1_3:+34708513 | None:intergenic |
| TTGAATTGGAAGACATTGAA+GGG | 0.532701 | 1_3:+34710116 | None:intergenic |
| AAGAAGCTTTCCGCACGTGC+CGG | 0.534156 | 1_3:-34709941 | Msa0115790:CDS |
| AAGGCCAGCCTTGATGAGGC+TGG | 0.538770 | 1_3:-34708190 | Msa0115790:CDS |
| TCCGTTGGCAACCACTTGCA+AGG | 0.540095 | 1_3:+34708731 | None:intergenic |
| GAAACCAGCCTCATCAAGGC+TGG | 0.540347 | 1_3:+34708186 | None:intergenic |
| GGTTGGTATAGGCATTCTTG+TGG | 0.542290 | 1_3:-34708266 | Msa0115790:CDS |
| GGCTGGCCTTTGTAATATGT+GGG | 0.544226 | 1_3:+34708203 | None:intergenic |
| AATAATCATGCTCACTTACA+GGG | 0.544543 | 1_3:+34707824 | None:intergenic |
| TGCAGTAATGTCACTGACGT+TGG | 0.545562 | 1_3:-34708685 | Msa0115790:CDS |
| TTTAATTTAGAAGGAAAGCA+TGG | 0.548870 | 1_3:-34707799 | Msa0115790:three_prime_UTR |
| GCACAAGTATCACTGACAAT+GGG | 0.552325 | 1_3:-34708762 | Msa0115790:CDS |
| TTGCGTCGTCGGAGACATCC+CGG | 0.554094 | 1_3:+34708524 | None:intergenic |
| GTTGGTATAGGCATTCTTGT+GGG | 0.554268 | 1_3:-34708265 | Msa0115790:CDS |
| TGCACAAGTATCACTGACAA+TGG | 0.559237 | 1_3:-34708763 | Msa0115790:CDS |
| CAGTATCAAAGAAGAACAGC+GGG | 0.562714 | 1_3:+34708115 | None:intergenic |
| GGATGAAGCCATATTATCGT+TGG | 0.568535 | 1_3:-34708590 | Msa0115790:CDS |
| TTAGAAGAGTTGGTATCGCA+AGG | 0.571643 | 1_3:-34708787 | Msa0115790:CDS |
| CATGTGAGGTCCGGCACGTG+CGG | 0.571811 | 1_3:+34709931 | None:intergenic |
| AACGAGAAACAGACTGAGCA+AGG | 0.573152 | 1_3:+34709864 | None:intergenic |
| GTTAGATTGCAACAAAGTTG+GGG | 0.573318 | 1_3:-34708611 | Msa0115790:CDS |
| CCAAAGGCTGTTGTGACTTG+CGG | 0.582732 | 1_3:-34708882 | Msa0115790:CDS |
| CAGTAATGTCACTGACGTTG+GGG | 0.590222 | 1_3:-34708683 | Msa0115790:CDS |
| GCCTTGCAAGTGGTTGCCAA+CGG | 0.590977 | 1_3:-34708732 | Msa0115790:CDS |
| AATGGAAACCAGCCTCATCA+AGG | 0.591066 | 1_3:+34708182 | None:intergenic |
| GGATTGTCCGCTGTTGCCAA+AGG | 0.592512 | 1_3:-34708898 | Msa0115790:CDS |
| ACCCTAACCCCAACGATTTG+GGG | 0.592993 | 1_3:+34710150 | None:intergenic |
| ATCGGTCAACTTTCTGCAGT+AGG | 0.593129 | 1_3:+34708924 | None:intergenic |
| TGTCCAAAGATCACAGTGGT+TGG | 0.596825 | 1_3:-34708283 | Msa0115790:CDS |
| TTCACATTTCTGAACCATTG+TGG | 0.604662 | 1_3:-34710198 | None:intergenic |
| TACAAAGGCCAGCCTTGATG+AGG | 0.616069 | 1_3:-34708194 | Msa0115790:CDS |
| AAGTCAATGCAGAAACCTTG+AGG | 0.622015 | 1_3:-34708407 | Msa0115790:CDS |
| AATACTAACATTACATCACC+AGG | 0.626150 | 1_3:+34708005 | None:intergenic |
| GTTGGGAATTACTGCCACAA+TGG | 0.626846 | 1_3:+34710184 | None:intergenic |
| TGCTTCGTAAAATGGCGGAT+AGG | 0.632749 | 1_3:-34709910 | Msa0115790:CDS |
| GGACATTGGTTGCTGTGAAG+AGG | 0.637833 | 1_3:-34708380 | Msa0115790:CDS |
| AACCAATGTCCAGCGCCTCA+AGG | 0.645063 | 1_3:+34708392 | None:intergenic |
| TTCGGTTACAGAGCACCGAA+AGG | 0.647830 | 1_3:-34709964 | Msa0115790:CDS |
| AAATTAGCCCCAAATCGTTG+GGG | 0.653064 | 1_3:-34710157 | Msa0115790:five_prime_UTR |
| ATCATGCCCACATATTACAA+AGG | 0.655004 | 1_3:-34708209 | Msa0115790:CDS |
| ACAACAGCCTTTGGCAACAG+CGG | 0.655606 | 1_3:+34708891 | None:intergenic |
| AGATCAGAATCAGTAACACC+AGG | 0.663167 | 1_3:+34709833 | None:intergenic |
| TCTGCAGTAGGACACATCCA+AGG | 0.671070 | 1_3:+34708936 | None:intergenic |
| TCACATGCTTCGTAAAATGG+CGG | 0.678714 | 1_3:-34709915 | Msa0115790:CDS |
| GGAATGAAAGCTATTGGTGA+CGG | 0.691647 | 1_3:-34708976 | Msa0115790:CDS |
| ACAGTATCAAAGAAGAACAG+CGG | 0.709643 | 1_3:+34708114 | None:intergenic |
| TGCTTCGTTTATGCATAACG+CGG | 0.712266 | 1_3:+34710075 | None:intergenic |
| GGGCTGATAAGCCTTGCAAG+TGG | 0.747702 | 1_3:-34708742 | Msa0115790:CDS |
| TAATTGTCCAAAGATCACAG+TGG | 0.819306 | 1_3:-34708287 | Msa0115790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAGAGAAAACATTAAA+TGG | + | chr1_3:34708891-34708910 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAAATATTCAATT+TGG | - | chr1_3:34708910-34708929 | Msa0115790:CDS | 15.0% |
| !!! | AAATTCAAATTTGAGTTTAA+TGG | - | chr1_3:34708936-34708955 | Msa0115790:CDS | 15.0% |
| !!! | AATTCAAATTTGAGTTTAAT+GGG | - | chr1_3:34708937-34708956 | Msa0115790:CDS | 15.0% |
| !! | ATAATAATTTACAGGAATTA+CGG | - | chr1_3:34708978-34708997 | Msa0115790:CDS | 15.0% |
| !!! | GATTATTTCTTTAATTTAGA+AGG | - | chr1_3:34710174-34710193 | Msa0115790:five_prime_UTR | 15.0% |
| !! | TAATAAGAGAAAACATTAAA+TGG | + | chr1_3:34708891-34708910 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAAATATTCAATT+TGG | - | chr1_3:34708910-34708929 | Msa0115790:CDS | 15.0% |
| !!! | AAATTCAAATTTGAGTTTAA+TGG | - | chr1_3:34708936-34708955 | Msa0115790:CDS | 15.0% |
| !!! | AATTCAAATTTGAGTTTAAT+GGG | - | chr1_3:34708937-34708956 | Msa0115790:CDS | 15.0% |
| !! | ATAATAATTTACAGGAATTA+CGG | - | chr1_3:34708978-34708997 | Msa0115790:CDS | 15.0% |
| !!! | GATTATTTCTTTAATTTAGA+AGG | - | chr1_3:34710174-34710193 | Msa0115790:five_prime_UTR | 15.0% |
| !! | AAAATACTAATTCATTAGGT+AGG | + | chr1_3:34708671-34708690 | None:intergenic | 20.0% |
| !!! | TACCTAATGAATTAGTATTT+TGG | - | chr1_3:34708670-34708689 | Msa0115790:CDS | 20.0% |
| !!! | ACCTAATGAATTAGTATTTT+GGG | - | chr1_3:34708671-34708690 | Msa0115790:CDS | 20.0% |
| !!! | ATTCAAATTTGAGTTTAATG+GGG | - | chr1_3:34708938-34708957 | Msa0115790:CDS | 20.0% |
| !! | GTGTGTTTATAATAATTTAC+AGG | - | chr1_3:34708970-34708989 | Msa0115790:CDS | 20.0% |
| !!! | TTTTGCAAGGTTAATTTTAA+TGG | - | chr1_3:34709831-34709850 | Msa0115790:CDS | 20.0% |
| !! | AAAATACTAATTCATTAGGT+AGG | + | chr1_3:34708671-34708690 | None:intergenic | 20.0% |
| !!! | TACCTAATGAATTAGTATTT+TGG | - | chr1_3:34708670-34708689 | Msa0115790:CDS | 20.0% |
| !!! | ACCTAATGAATTAGTATTTT+GGG | - | chr1_3:34708671-34708690 | Msa0115790:CDS | 20.0% |
| !!! | ATTCAAATTTGAGTTTAATG+GGG | - | chr1_3:34708938-34708957 | Msa0115790:CDS | 20.0% |
| !! | GTGTGTTTATAATAATTTAC+AGG | - | chr1_3:34708970-34708989 | Msa0115790:CDS | 20.0% |
| !!! | TTTTGCAAGGTTAATTTTAA+TGG | - | chr1_3:34709831-34709850 | Msa0115790:CDS | 20.0% |
| !!! | TTTTGTTTAATTGTTTCCGA+CGG | - | chr1_3:34708363-34708382 | Msa0115790:CDS | 25.0% |
| !!! | GTTGTTTTCATTGAGATTAT+TGG | - | chr1_3:34708491-34708510 | Msa0115790:CDS | 25.0% |
| ! | TCCCAAAATACTAATTCATT+AGG | + | chr1_3:34708675-34708694 | None:intergenic | 25.0% |
| !! | TTTTCACATTTTAAGCAATG+AGG | - | chr1_3:34709638-34709657 | Msa0115790:intron | 25.0% |
| ! | AAAATCTTCAAACTCAAATC+AGG | + | chr1_3:34709666-34709685 | None:intergenic | 25.0% |
| ! | ATAAGTGAACTTTCTTGATA+TGG | - | chr1_3:34709920-34709939 | Msa0115790:CDS | 25.0% |
| !! | TTTAATTTAGAAGGAAAGCA+TGG | - | chr1_3:34710183-34710202 | Msa0115790:five_prime_UTR | 25.0% |
| !!! | TTTTGTTTAATTGTTTCCGA+CGG | - | chr1_3:34708363-34708382 | Msa0115790:CDS | 25.0% |
| !!! | GTTGTTTTCATTGAGATTAT+TGG | - | chr1_3:34708491-34708510 | Msa0115790:CDS | 25.0% |
| ! | TCCCAAAATACTAATTCATT+AGG | + | chr1_3:34708675-34708694 | None:intergenic | 25.0% |
| !! | TTTTCACATTTTAAGCAATG+AGG | - | chr1_3:34709638-34709657 | Msa0115790:intron | 25.0% |
| ! | AAAATCTTCAAACTCAAATC+AGG | + | chr1_3:34709666-34709685 | None:intergenic | 25.0% |
| ! | ATAAGTGAACTTTCTTGATA+TGG | - | chr1_3:34709920-34709939 | Msa0115790:CDS | 25.0% |
| !! | TTTAATTTAGAAGGAAAGCA+TGG | - | chr1_3:34710183-34710202 | Msa0115790:five_prime_UTR | 25.0% |
| TTGAATTGGAAGACATTGAA+GGG | + | chr1_3:34707869-34707888 | None:intergenic | 30.0% | |
| ! | ATGCATAAACGAAGCATTAA+CGG | - | chr1_3:34707914-34707933 | Msa0115790:three_prime_UTR | 30.0% |
| CTTTACAGTTATGCAAATTG+AGG | + | chr1_3:34708211-34708230 | None:intergenic | 30.0% | |
| CTCAATTTGCATAACTGTAA+AGG | - | chr1_3:34708209-34708228 | Msa0115790:CDS | 30.0% | |
| TTTGTTTAATTGTTTCCGAC+GGG | - | chr1_3:34708364-34708383 | Msa0115790:CDS | 30.0% | |
| GCTAATAAGTTTCTCTTCTT+AGG | + | chr1_3:34708402-34708421 | None:intergenic | 30.0% | |
| AAACACTAGTAGTCATTAGT+GGG | + | chr1_3:34708435-34708454 | None:intergenic | 30.0% | |
| AAAACACTAGTAGTCATTAG+TGG | + | chr1_3:34708436-34708455 | None:intergenic | 30.0% | |
| ! | ACTAATGACTACTAGTGTTT+TGG | - | chr1_3:34708435-34708454 | Msa0115790:CDS | 30.0% |
| CATAAACTTAACTTAAGGAG+AGG | + | chr1_3:34708466-34708485 | None:intergenic | 30.0% | |
| CAGAGCATAAACTTAACTTA+AGG | + | chr1_3:34708471-34708490 | None:intergenic | 30.0% | |
| CTTAAGTTAAGTTTATGCTC+TGG | - | chr1_3:34708469-34708488 | Msa0115790:CDS | 30.0% | |
| ! | GTTTTCATTGAGATTATTGG+TGG | - | chr1_3:34708494-34708513 | Msa0115790:CDS | 30.0% |
| ! | GTGACATTTCACTCAATTTT+CGG | + | chr1_3:34708526-34708545 | None:intergenic | 30.0% |
| CAAGTAGTGGTGTATTATTA+TGG | - | chr1_3:34708591-34708610 | Msa0115790:CDS | 30.0% | |
| TTAGATGAGACTATCAAATG+TGG | + | chr1_3:34708619-34708638 | None:intergenic | 30.0% | |
| ATATGTGTGATTACTGATGA+AGG | - | chr1_3:34708853-34708872 | Msa0115790:CDS | 30.0% | |
| TTGTTAGATTGCAACAAAGT+TGG | - | chr1_3:34709369-34709388 | Msa0115790:intron | 30.0% | |
| TGTTAGATTGCAACAAAGTT+GGG | - | chr1_3:34709370-34709389 | Msa0115790:intron | 30.0% | |
| GAATTTAGCCAACGATAATA+TGG | + | chr1_3:34709403-34709422 | None:intergenic | 30.0% | |
| GAAACAACCTTAAAAACTTG+AGG | - | chr1_3:34709505-34709524 | Msa0115790:intron | 30.0% | |
| ! | AATCCATCCTCAAGTTTTTA+AGG | + | chr1_3:34709515-34709534 | None:intergenic | 30.0% |
| TTAAAAACTTGAGGATGGAT+TGG | - | chr1_3:34709514-34709533 | Msa0115790:intron | 30.0% | |
| AAATTAACCTTGCAAAAGTC+AGG | + | chr1_3:34709828-34709847 | None:intergenic | 30.0% | |
| AATACTAACATTACATCACC+AGG | + | chr1_3:34709980-34709999 | None:intergenic | 30.0% | |
| GTCACTTCACAAATTTGTAT+TGG | - | chr1_3:34710123-34710142 | Msa0115790:exon | 30.0% | |
| AATAATCATGCTCACTTACA+GGG | + | chr1_3:34710161-34710180 | None:intergenic | 30.0% | |
| AAATAATCATGCTCACTTAC+AGG | + | chr1_3:34710162-34710181 | None:intergenic | 30.0% | |
| TTGAATTGGAAGACATTGAA+GGG | + | chr1_3:34707869-34707888 | None:intergenic | 30.0% | |
| ! | ATGCATAAACGAAGCATTAA+CGG | - | chr1_3:34707914-34707933 | Msa0115790:three_prime_UTR | 30.0% |
| CTTTACAGTTATGCAAATTG+AGG | + | chr1_3:34708211-34708230 | None:intergenic | 30.0% | |
| CTCAATTTGCATAACTGTAA+AGG | - | chr1_3:34708209-34708228 | Msa0115790:CDS | 30.0% | |
| TTTGTTTAATTGTTTCCGAC+GGG | - | chr1_3:34708364-34708383 | Msa0115790:CDS | 30.0% | |
| GCTAATAAGTTTCTCTTCTT+AGG | + | chr1_3:34708402-34708421 | None:intergenic | 30.0% | |
| AAACACTAGTAGTCATTAGT+GGG | + | chr1_3:34708435-34708454 | None:intergenic | 30.0% | |
| AAAACACTAGTAGTCATTAG+TGG | + | chr1_3:34708436-34708455 | None:intergenic | 30.0% | |
| ! | ACTAATGACTACTAGTGTTT+TGG | - | chr1_3:34708435-34708454 | Msa0115790:CDS | 30.0% |
| CATAAACTTAACTTAAGGAG+AGG | + | chr1_3:34708466-34708485 | None:intergenic | 30.0% | |
| CAGAGCATAAACTTAACTTA+AGG | + | chr1_3:34708471-34708490 | None:intergenic | 30.0% | |
| CTTAAGTTAAGTTTATGCTC+TGG | - | chr1_3:34708469-34708488 | Msa0115790:CDS | 30.0% | |
| ! | GTTTTCATTGAGATTATTGG+TGG | - | chr1_3:34708494-34708513 | Msa0115790:CDS | 30.0% |
| ! | GTGACATTTCACTCAATTTT+CGG | + | chr1_3:34708526-34708545 | None:intergenic | 30.0% |
| CAAGTAGTGGTGTATTATTA+TGG | - | chr1_3:34708591-34708610 | Msa0115790:CDS | 30.0% | |
| TTAGATGAGACTATCAAATG+TGG | + | chr1_3:34708619-34708638 | None:intergenic | 30.0% | |
| ATATGTGTGATTACTGATGA+AGG | - | chr1_3:34708853-34708872 | Msa0115790:CDS | 30.0% | |
| TTGTTAGATTGCAACAAAGT+TGG | - | chr1_3:34709369-34709388 | Msa0115790:intron | 30.0% | |
| TGTTAGATTGCAACAAAGTT+GGG | - | chr1_3:34709370-34709389 | Msa0115790:intron | 30.0% | |
| GAATTTAGCCAACGATAATA+TGG | + | chr1_3:34709403-34709422 | None:intergenic | 30.0% | |
| GAAACAACCTTAAAAACTTG+AGG | - | chr1_3:34709505-34709524 | Msa0115790:intron | 30.0% | |
| ! | AATCCATCCTCAAGTTTTTA+AGG | + | chr1_3:34709515-34709534 | None:intergenic | 30.0% |
| TTAAAAACTTGAGGATGGAT+TGG | - | chr1_3:34709514-34709533 | Msa0115790:intron | 30.0% | |
| AAATTAACCTTGCAAAAGTC+AGG | + | chr1_3:34709828-34709847 | None:intergenic | 30.0% | |
| AATACTAACATTACATCACC+AGG | + | chr1_3:34709980-34709999 | None:intergenic | 30.0% | |
| GTCACTTCACAAATTTGTAT+TGG | - | chr1_3:34710123-34710142 | Msa0115790:exon | 30.0% | |
| AATAATCATGCTCACTTACA+GGG | + | chr1_3:34710161-34710180 | None:intergenic | 30.0% | |
| AAATAATCATGCTCACTTAC+AGG | + | chr1_3:34710162-34710181 | None:intergenic | 30.0% | |
| AAAAATTAGCCCCAAATCGT+TGG | - | chr1_3:34707823-34707842 | Msa0115790:three_prime_UTR | 35.0% | |
| AAAATTAGCCCCAAATCGTT+GGG | - | chr1_3:34707824-34707843 | Msa0115790:three_prime_UTR | 35.0% | |
| GTTGAATTGGAAGACATTGA+AGG | + | chr1_3:34707870-34707889 | None:intergenic | 35.0% | |
| !! | TGCATCTTCTGAAGTTGAAT+TGG | + | chr1_3:34707883-34707902 | None:intergenic | 35.0% |
| !! | GTCTTTTTCGCTATCAACTT+TGG | + | chr1_3:34707964-34707983 | None:intergenic | 35.0% |
| !! | AGTTGATAGCGAAAAAGACA+AGG | - | chr1_3:34707965-34707984 | Msa0115790:three_prime_UTR | 35.0% |
| GAAAAAGACAAGGAAACGTT+TGG | - | chr1_3:34707975-34707994 | Msa0115790:three_prime_UTR | 35.0% | |
| ATCTCGCTGTTATTGCTAAT+GGG | - | chr1_3:34708168-34708187 | Msa0115790:CDS | 35.0% | |
| !! | CTAATGGGTTTAGATGTTTG+AGG | - | chr1_3:34708183-34708202 | Msa0115790:CDS | 35.0% |
| AGGTAAAATTAAAAGCCCGT+CGG | + | chr1_3:34708382-34708401 | None:intergenic | 35.0% | |
| AGAAGAGAAACTTATTAGCC+AGG | - | chr1_3:34708403-34708422 | Msa0115790:CDS | 35.0% | |
| GAAGAGAAACTTATTAGCCA+GGG | - | chr1_3:34708404-34708423 | Msa0115790:CDS | 35.0% | |
| TCATTGAGATTATTGGTGGA+TGG | - | chr1_3:34708498-34708517 | Msa0115790:CDS | 35.0% | |
| ATAGTCTCATCTAAGAAGTG+AGG | - | chr1_3:34708625-34708644 | Msa0115790:CDS | 35.0% | |
| AAATGCAAACCGAGAGTTAT+GGG | + | chr1_3:34708730-34708749 | None:intergenic | 35.0% | |
| ! | TCGGTTTGCATTTCTAGATA+CGG | - | chr1_3:34708737-34708756 | Msa0115790:CDS | 35.0% |
| TTTACAGGAATTACGGATGT+TGG | - | chr1_3:34708985-34709004 | Msa0115790:CDS | 35.0% | |
| GATGTTGGAATGAAAGCTAT+TGG | - | chr1_3:34709000-34709019 | Msa0115790:intron | 35.0% | |
| TCTTTCCTTATTACAGTCCT+TGG | - | chr1_3:34709029-34709048 | Msa0115790:intron | 35.0% | |
| CTGTCGTAATTTAGAAGAGT+TGG | - | chr1_3:34709185-34709204 | Msa0115790:intron | 35.0% | |
| TGTCTAAATACTTGATCCGT+TGG | + | chr1_3:34709269-34709288 | None:intergenic | 35.0% | |
| GTTAGATTGCAACAAAGTTG+GGG | - | chr1_3:34709371-34709390 | Msa0115790:intron | 35.0% | |
| GGCTAAATTCTGTGATAATC+TGG | - | chr1_3:34709413-34709432 | Msa0115790:intron | 35.0% | |
| AATCTGGAGACTTTGATCAT+TGG | - | chr1_3:34709429-34709448 | Msa0115790:intron | 35.0% | |
| CAACCTTAAAAACTTGAGGA+TGG | - | chr1_3:34709509-34709528 | Msa0115790:intron | 35.0% | |
| TAATTGTCCAAAGATCACAG+TGG | - | chr1_3:34709695-34709714 | Msa0115790:intron | 35.0% | |
| ATCATGCCCACATATTACAA+AGG | - | chr1_3:34709773-34709792 | Msa0115790:intron | 35.0% | |
| ACAGTATCAAAGAAGAACAG+CGG | + | chr1_3:34709871-34709890 | None:intergenic | 35.0% | |
| ! | GGCATGTCTTTAGAAATTTG+AGG | - | chr1_3:34709941-34709960 | Msa0115790:CDS | 35.0% |
| TTTGCAAGCACATTTGTGTT+CGG | - | chr1_3:34710087-34710106 | Msa0115790:CDS | 35.0% | |
| AAAAATTAGCCCCAAATCGT+TGG | - | chr1_3:34707823-34707842 | Msa0115790:three_prime_UTR | 35.0% | |
| AAAATTAGCCCCAAATCGTT+GGG | - | chr1_3:34707824-34707843 | Msa0115790:three_prime_UTR | 35.0% | |
| GTTGAATTGGAAGACATTGA+AGG | + | chr1_3:34707870-34707889 | None:intergenic | 35.0% | |
| !! | TGCATCTTCTGAAGTTGAAT+TGG | + | chr1_3:34707883-34707902 | None:intergenic | 35.0% |
| !! | GTCTTTTTCGCTATCAACTT+TGG | + | chr1_3:34707964-34707983 | None:intergenic | 35.0% |
| !! | AGTTGATAGCGAAAAAGACA+AGG | - | chr1_3:34707965-34707984 | Msa0115790:three_prime_UTR | 35.0% |
| GAAAAAGACAAGGAAACGTT+TGG | - | chr1_3:34707975-34707994 | Msa0115790:three_prime_UTR | 35.0% | |
| ATCTCGCTGTTATTGCTAAT+GGG | - | chr1_3:34708168-34708187 | Msa0115790:CDS | 35.0% | |
| !! | CTAATGGGTTTAGATGTTTG+AGG | - | chr1_3:34708183-34708202 | Msa0115790:CDS | 35.0% |
| AGGTAAAATTAAAAGCCCGT+CGG | + | chr1_3:34708382-34708401 | None:intergenic | 35.0% | |
| AGAAGAGAAACTTATTAGCC+AGG | - | chr1_3:34708403-34708422 | Msa0115790:CDS | 35.0% | |
| GAAGAGAAACTTATTAGCCA+GGG | - | chr1_3:34708404-34708423 | Msa0115790:CDS | 35.0% | |
| TCATTGAGATTATTGGTGGA+TGG | - | chr1_3:34708498-34708517 | Msa0115790:CDS | 35.0% | |
| ATAGTCTCATCTAAGAAGTG+AGG | - | chr1_3:34708625-34708644 | Msa0115790:CDS | 35.0% | |
| AAATGCAAACCGAGAGTTAT+GGG | + | chr1_3:34708730-34708749 | None:intergenic | 35.0% | |
| ! | TCGGTTTGCATTTCTAGATA+CGG | - | chr1_3:34708737-34708756 | Msa0115790:CDS | 35.0% |
| TTTACAGGAATTACGGATGT+TGG | - | chr1_3:34708985-34709004 | Msa0115790:CDS | 35.0% | |
| GATGTTGGAATGAAAGCTAT+TGG | - | chr1_3:34709000-34709019 | Msa0115790:intron | 35.0% | |
| TCTTTCCTTATTACAGTCCT+TGG | - | chr1_3:34709029-34709048 | Msa0115790:intron | 35.0% | |
| CTGTCGTAATTTAGAAGAGT+TGG | - | chr1_3:34709185-34709204 | Msa0115790:intron | 35.0% | |
| TGTCTAAATACTTGATCCGT+TGG | + | chr1_3:34709269-34709288 | None:intergenic | 35.0% | |
| GTTAGATTGCAACAAAGTTG+GGG | - | chr1_3:34709371-34709390 | Msa0115790:intron | 35.0% | |
| GGCTAAATTCTGTGATAATC+TGG | - | chr1_3:34709413-34709432 | Msa0115790:intron | 35.0% | |
| AATCTGGAGACTTTGATCAT+TGG | - | chr1_3:34709429-34709448 | Msa0115790:intron | 35.0% | |
| CAACCTTAAAAACTTGAGGA+TGG | - | chr1_3:34709509-34709528 | Msa0115790:intron | 35.0% | |
| TAATTGTCCAAAGATCACAG+TGG | - | chr1_3:34709695-34709714 | Msa0115790:intron | 35.0% | |
| ATCATGCCCACATATTACAA+AGG | - | chr1_3:34709773-34709792 | Msa0115790:intron | 35.0% | |
| ACAGTATCAAAGAAGAACAG+CGG | + | chr1_3:34709871-34709890 | None:intergenic | 35.0% | |
| ! | GGCATGTCTTTAGAAATTTG+AGG | - | chr1_3:34709941-34709960 | Msa0115790:CDS | 35.0% |
| TTTGCAAGCACATTTGTGTT+CGG | - | chr1_3:34710087-34710106 | Msa0115790:CDS | 35.0% | |
| ! | TTGGGGCTAATTTTTGCGTT+GGG | + | chr1_3:34707818-34707837 | None:intergenic | 40.0% |
| !! | TTTGGGGCTAATTTTTGCGT+TGG | + | chr1_3:34707819-34707838 | None:intergenic | 40.0% |
| AAATTAGCCCCAAATCGTTG+GGG | - | chr1_3:34707825-34707844 | Msa0115790:three_prime_UTR | 40.0% | |
| TGCTTCGTTTATGCATAACG+CGG | + | chr1_3:34707910-34707929 | None:intergenic | 40.0% | |
| AGACAAGGAAACGTTTGGTT+TGG | - | chr1_3:34707980-34707999 | Msa0115790:three_prime_UTR | 40.0% | |
| ACCTCACATGCTTCGTAAAA+TGG | - | chr1_3:34708064-34708083 | Msa0115790:three_prime_UTR | 40.0% | |
| TCACATGCTTCGTAAAATGG+CGG | - | chr1_3:34708067-34708086 | Msa0115790:three_prime_UTR | 40.0% | |
| AGATCAGAATCAGTAACACC+AGG | + | chr1_3:34708152-34708171 | None:intergenic | 40.0% | |
| GATCTCGCTGTTATTGCTAA+TGG | - | chr1_3:34708167-34708186 | Msa0115790:CDS | 40.0% | |
| ! | TGTCACCTAGTAAAGTGTTC+TGG | - | chr1_3:34708540-34708559 | Msa0115790:CDS | 40.0% |
| ATACACCACTACTTGAGAGT+AGG | + | chr1_3:34708586-34708605 | None:intergenic | 40.0% | |
| !! | TTTGGGATAGACTCTCCTTT+TGG | - | chr1_3:34708688-34708707 | Msa0115790:CDS | 40.0% |
| AATGCAAACCGAGAGTTATG+GGG | + | chr1_3:34708729-34708748 | None:intergenic | 40.0% | |
| GAAATGCAAACCGAGAGTTA+TGG | + | chr1_3:34708731-34708750 | None:intergenic | 40.0% | |
| GGAATGAAAGCTATTGGTGA+CGG | - | chr1_3:34709006-34709025 | Msa0115790:intron | 40.0% | |
| CACATCCAAGGACTGTAATA+AGG | + | chr1_3:34709037-34709056 | None:intergenic | 40.0% | |
| TGCAGAAAGTTGACCGATAA+GGG | - | chr1_3:34709063-34709082 | Msa0115790:intron | 40.0% | |
| TTGCGGATATTGCATCTTAC+TGG | - | chr1_3:34709117-34709136 | Msa0115790:intron | 40.0% | |
| TGCGGATATTGCATCTTACT+GGG | - | chr1_3:34709118-34709137 | Msa0115790:intron | 40.0% | |
| !! | TACTGGGTGCAGATTTGTTA+CGG | - | chr1_3:34709134-34709153 | Msa0115790:intron | 40.0% |
| !! | TTAGAAGAGTTGGTATCGCA+AGG | - | chr1_3:34709195-34709214 | Msa0115790:intron | 40.0% |
| TGCACAAGTATCACTGACAA+TGG | - | chr1_3:34709219-34709238 | Msa0115790:intron | 40.0% | |
| GCACAAGTATCACTGACAAT+GGG | - | chr1_3:34709220-34709239 | Msa0115790:intron | 40.0% | |
| ! | TGGGGTTTCGAGTATTTGTA+AGG | - | chr1_3:34709317-34709336 | Msa0115790:intron | 40.0% |
| GGATGAAGCCATATTATCGT+TGG | - | chr1_3:34709392-34709411 | Msa0115790:intron | 40.0% | |
| CAGAAACTTTATTGCGTCGT+CGG | + | chr1_3:34709472-34709491 | None:intergenic | 40.0% | |
| AAGTCAATGCAGAAACCTTG+AGG | - | chr1_3:34709575-34709594 | Msa0115790:intron | 40.0% | |
| ATACCAACCACTGTGATCTT+TGG | + | chr1_3:34709705-34709724 | None:intergenic | 40.0% | |
| ! | AAGATCACAGTGGTTGGTAT+AGG | - | chr1_3:34709705-34709724 | Msa0115790:intron | 40.0% |
| GTTGGTATAGGCATTCTTGT+GGG | - | chr1_3:34709717-34709736 | Msa0115790:intron | 40.0% | |
| ATGCAGTTACCTGGAATACT+TGG | - | chr1_3:34709743-34709762 | Msa0115790:intron | 40.0% | |
| ATCTCACATCCAAGTATTCC+AGG | + | chr1_3:34709755-34709774 | None:intergenic | 40.0% | |
| CCTTGCAAAAGTCAGGTAAA+TGG | + | chr1_3:34709821-34709840 | None:intergenic | 40.0% | |
| ! | CCATTTACCTGACTTTTGCA+AGG | - | chr1_3:34709818-34709837 | Msa0115790:CDS | 40.0% |
| CAGTATCAAAGAAGAACAGC+GGG | + | chr1_3:34709870-34709889 | None:intergenic | 40.0% | |
| TGAGGAGAATTTATCAGTCC+TGG | - | chr1_3:34709959-34709978 | Msa0115790:CDS | 40.0% | |
| ! | ATGTCTATCACTGTGCTGAT+TGG | - | chr1_3:34710017-34710036 | Msa0115790:CDS | 40.0% |
| ! | TTGGGGCTAATTTTTGCGTT+GGG | + | chr1_3:34707818-34707837 | None:intergenic | 40.0% |
| !! | TTTGGGGCTAATTTTTGCGT+TGG | + | chr1_3:34707819-34707838 | None:intergenic | 40.0% |
| AAATTAGCCCCAAATCGTTG+GGG | - | chr1_3:34707825-34707844 | Msa0115790:three_prime_UTR | 40.0% | |
| TGCTTCGTTTATGCATAACG+CGG | + | chr1_3:34707910-34707929 | None:intergenic | 40.0% | |
| AGACAAGGAAACGTTTGGTT+TGG | - | chr1_3:34707980-34707999 | Msa0115790:three_prime_UTR | 40.0% | |
| ACCTCACATGCTTCGTAAAA+TGG | - | chr1_3:34708064-34708083 | Msa0115790:three_prime_UTR | 40.0% | |
| TCACATGCTTCGTAAAATGG+CGG | - | chr1_3:34708067-34708086 | Msa0115790:three_prime_UTR | 40.0% | |
| AGATCAGAATCAGTAACACC+AGG | + | chr1_3:34708152-34708171 | None:intergenic | 40.0% | |
| GATCTCGCTGTTATTGCTAA+TGG | - | chr1_3:34708167-34708186 | Msa0115790:CDS | 40.0% | |
| ! | TGTCACCTAGTAAAGTGTTC+TGG | - | chr1_3:34708540-34708559 | Msa0115790:CDS | 40.0% |
| ATACACCACTACTTGAGAGT+AGG | + | chr1_3:34708586-34708605 | None:intergenic | 40.0% | |
| !! | TTTGGGATAGACTCTCCTTT+TGG | - | chr1_3:34708688-34708707 | Msa0115790:CDS | 40.0% |
| AATGCAAACCGAGAGTTATG+GGG | + | chr1_3:34708729-34708748 | None:intergenic | 40.0% | |
| GAAATGCAAACCGAGAGTTA+TGG | + | chr1_3:34708731-34708750 | None:intergenic | 40.0% | |
| GGAATGAAAGCTATTGGTGA+CGG | - | chr1_3:34709006-34709025 | Msa0115790:intron | 40.0% | |
| CACATCCAAGGACTGTAATA+AGG | + | chr1_3:34709037-34709056 | None:intergenic | 40.0% | |
| TGCAGAAAGTTGACCGATAA+GGG | - | chr1_3:34709063-34709082 | Msa0115790:intron | 40.0% | |
| TTGCGGATATTGCATCTTAC+TGG | - | chr1_3:34709117-34709136 | Msa0115790:intron | 40.0% | |
| TGCGGATATTGCATCTTACT+GGG | - | chr1_3:34709118-34709137 | Msa0115790:intron | 40.0% | |
| !! | TACTGGGTGCAGATTTGTTA+CGG | - | chr1_3:34709134-34709153 | Msa0115790:intron | 40.0% |
| !! | TTAGAAGAGTTGGTATCGCA+AGG | - | chr1_3:34709195-34709214 | Msa0115790:intron | 40.0% |
| TGCACAAGTATCACTGACAA+TGG | - | chr1_3:34709219-34709238 | Msa0115790:intron | 40.0% | |
| GCACAAGTATCACTGACAAT+GGG | - | chr1_3:34709220-34709239 | Msa0115790:intron | 40.0% | |
| ! | TGGGGTTTCGAGTATTTGTA+AGG | - | chr1_3:34709317-34709336 | Msa0115790:intron | 40.0% |
| GGATGAAGCCATATTATCGT+TGG | - | chr1_3:34709392-34709411 | Msa0115790:intron | 40.0% | |
| CAGAAACTTTATTGCGTCGT+CGG | + | chr1_3:34709472-34709491 | None:intergenic | 40.0% | |
| AAGTCAATGCAGAAACCTTG+AGG | - | chr1_3:34709575-34709594 | Msa0115790:intron | 40.0% | |
| ATACCAACCACTGTGATCTT+TGG | + | chr1_3:34709705-34709724 | None:intergenic | 40.0% | |
| ! | AAGATCACAGTGGTTGGTAT+AGG | - | chr1_3:34709705-34709724 | Msa0115790:intron | 40.0% |
| GTTGGTATAGGCATTCTTGT+GGG | - | chr1_3:34709717-34709736 | Msa0115790:intron | 40.0% | |
| ATGCAGTTACCTGGAATACT+TGG | - | chr1_3:34709743-34709762 | Msa0115790:intron | 40.0% | |
| ATCTCACATCCAAGTATTCC+AGG | + | chr1_3:34709755-34709774 | None:intergenic | 40.0% | |
| CCTTGCAAAAGTCAGGTAAA+TGG | + | chr1_3:34709821-34709840 | None:intergenic | 40.0% | |
| ! | CCATTTACCTGACTTTTGCA+AGG | - | chr1_3:34709818-34709837 | Msa0115790:CDS | 40.0% |
| CAGTATCAAAGAAGAACAGC+GGG | + | chr1_3:34709870-34709889 | None:intergenic | 40.0% | |
| TGAGGAGAATTTATCAGTCC+TGG | - | chr1_3:34709959-34709978 | Msa0115790:CDS | 40.0% | |
| ! | ATGTCTATCACTGTGCTGAT+TGG | - | chr1_3:34710017-34710036 | Msa0115790:CDS | 40.0% |
| GTTGGGAATTACTGCCACAA+TGG | + | chr1_3:34707801-34707820 | None:intergenic | 45.0% | |
| AACCCTAACCCCAACGATTT+GGG | + | chr1_3:34707836-34707855 | None:intergenic | 45.0% | |
| AAACCCTAACCCCAACGATT+TGG | + | chr1_3:34707837-34707856 | None:intergenic | 45.0% | |
| !! | TTGGTTTGGTTTGCAAGCGA+TGG | - | chr1_3:34707994-34708013 | Msa0115790:three_prime_UTR | 45.0% |
| TGCGGAAAGCTTCTTCCTTT+CGG | + | chr1_3:34708036-34708055 | None:intergenic | 45.0% | |
| TTTACGAAGCATGTGAGGTC+CGG | + | chr1_3:34708063-34708082 | None:intergenic | 45.0% | |
| !! | GCCATTTTACGAAGCATGTG+AGG | + | chr1_3:34708068-34708087 | None:intergenic | 45.0% |
| !! | TGCTTCGTAAAATGGCGGAT+AGG | - | chr1_3:34708072-34708091 | Msa0115790:three_prime_UTR | 45.0% |
| AACGAGAAACAGACTGAGCA+AGG | + | chr1_3:34708121-34708140 | None:intergenic | 45.0% | |
| GTTTCTCGTTCGTTCTATCC+TGG | - | chr1_3:34708131-34708150 | Msa0115790:CDS | 45.0% | |
| GTCATTAGTGGGAAAATCCC+TGG | + | chr1_3:34708424-34708443 | None:intergenic | 45.0% | |
| CCACTCCAGAACACTTTACT+AGG | + | chr1_3:34708548-34708567 | None:intergenic | 45.0% | |
| !! | CCTAGTAAAGTGTTCTGGAG+TGG | - | chr1_3:34708545-34708564 | Msa0115790:CDS | 45.0% |
| !! | AAGTGTTCTGGAGTGGAAGT+TGG | - | chr1_3:34708552-34708571 | Msa0115790:CDS | 45.0% |
| AAGTGAGGCTTATAAGCCAG+AGG | - | chr1_3:34708640-34708659 | Msa0115790:CDS | 45.0% | |
| AGTGAGGCTTATAAGCCAGA+GGG | - | chr1_3:34708641-34708660 | Msa0115790:CDS | 45.0% | |
| TGCACGAGCATAAGTCCAAA+AGG | + | chr1_3:34708706-34708725 | None:intergenic | 45.0% | |
| ! | GCATTTCTAGATACGGAGAG+AGG | - | chr1_3:34708744-34708763 | Msa0115790:CDS | 45.0% |
| GTGTGATTACTGATGAAGGC+TGG | - | chr1_3:34708857-34708876 | Msa0115790:CDS | 45.0% | |
| ! | ATTACTGATGAAGGCTGGTC+TGG | - | chr1_3:34708862-34708881 | Msa0115790:CDS | 45.0% |
| ATCGGTCAACTTTCTGCAGT+AGG | + | chr1_3:34709061-34709080 | None:intergenic | 45.0% | |
| CTGCAGAAAGTTGACCGATA+AGG | - | chr1_3:34709062-34709081 | Msa0115790:intron | 45.0% | |
| AACAGCGGACAATCCCTTAT+CGG | + | chr1_3:34709079-34709098 | None:intergenic | 45.0% | |
| TGCAGTAATGTCACTGACGT+TGG | - | chr1_3:34709297-34709316 | Msa0115790:intron | 45.0% | |
| GCAGTAATGTCACTGACGTT+GGG | - | chr1_3:34709298-34709317 | Msa0115790:intron | 45.0% | |
| CAGTAATGTCACTGACGTTG+GGG | - | chr1_3:34709299-34709318 | Msa0115790:intron | 45.0% | |
| CTGGAGACTTTGATCATTGG+TGG | - | chr1_3:34709432-34709451 | Msa0115790:intron | 45.0% | |
| ! | CTTTGATCATTGGTGGTTGC+CGG | - | chr1_3:34709439-34709458 | Msa0115790:intron | 45.0% |
| ! | TTTGATCATTGGTGGTTGCC+GGG | - | chr1_3:34709440-34709459 | Msa0115790:intron | 45.0% |
| CGACGACGCAATAAAGTTTC+TGG | - | chr1_3:34709470-34709489 | Msa0115790:intron | 45.0% | |
| TGTCCAAAGATCACAGTGGT+TGG | - | chr1_3:34709699-34709718 | Msa0115790:intron | 45.0% | |
| ! | GGTTGGTATAGGCATTCTTG+TGG | - | chr1_3:34709716-34709735 | Msa0115790:intron | 45.0% |
| TGTGGGTAAATGCAGTTACC+TGG | - | chr1_3:34709734-34709753 | Msa0115790:intron | 45.0% | |
| !! | GGCTGGCCTTTGTAATATGT+GGG | + | chr1_3:34709782-34709801 | None:intergenic | 45.0% |
| !! | AGGCTGGCCTTTGTAATATG+TGG | + | chr1_3:34709783-34709802 | None:intergenic | 45.0% |
| AATGGAAACCAGCCTCATCA+AGG | + | chr1_3:34709803-34709822 | None:intergenic | 45.0% | |
| GTTGGGAATTACTGCCACAA+TGG | + | chr1_3:34707801-34707820 | None:intergenic | 45.0% | |
| AACCCTAACCCCAACGATTT+GGG | + | chr1_3:34707836-34707855 | None:intergenic | 45.0% | |
| AAACCCTAACCCCAACGATT+TGG | + | chr1_3:34707837-34707856 | None:intergenic | 45.0% | |
| !! | TTGGTTTGGTTTGCAAGCGA+TGG | - | chr1_3:34707994-34708013 | Msa0115790:three_prime_UTR | 45.0% |
| TGCGGAAAGCTTCTTCCTTT+CGG | + | chr1_3:34708036-34708055 | None:intergenic | 45.0% | |
| TTTACGAAGCATGTGAGGTC+CGG | + | chr1_3:34708063-34708082 | None:intergenic | 45.0% | |
| !! | GCCATTTTACGAAGCATGTG+AGG | + | chr1_3:34708068-34708087 | None:intergenic | 45.0% |
| !! | TGCTTCGTAAAATGGCGGAT+AGG | - | chr1_3:34708072-34708091 | Msa0115790:three_prime_UTR | 45.0% |
| AACGAGAAACAGACTGAGCA+AGG | + | chr1_3:34708121-34708140 | None:intergenic | 45.0% | |
| GTTTCTCGTTCGTTCTATCC+TGG | - | chr1_3:34708131-34708150 | Msa0115790:CDS | 45.0% | |
| GTCATTAGTGGGAAAATCCC+TGG | + | chr1_3:34708424-34708443 | None:intergenic | 45.0% | |
| CCACTCCAGAACACTTTACT+AGG | + | chr1_3:34708548-34708567 | None:intergenic | 45.0% | |
| !! | CCTAGTAAAGTGTTCTGGAG+TGG | - | chr1_3:34708545-34708564 | Msa0115790:CDS | 45.0% |
| !! | AAGTGTTCTGGAGTGGAAGT+TGG | - | chr1_3:34708552-34708571 | Msa0115790:CDS | 45.0% |
| AAGTGAGGCTTATAAGCCAG+AGG | - | chr1_3:34708640-34708659 | Msa0115790:CDS | 45.0% | |
| AGTGAGGCTTATAAGCCAGA+GGG | - | chr1_3:34708641-34708660 | Msa0115790:CDS | 45.0% | |
| TGCACGAGCATAAGTCCAAA+AGG | + | chr1_3:34708706-34708725 | None:intergenic | 45.0% | |
| ! | GCATTTCTAGATACGGAGAG+AGG | - | chr1_3:34708744-34708763 | Msa0115790:CDS | 45.0% |
| GTGTGATTACTGATGAAGGC+TGG | - | chr1_3:34708857-34708876 | Msa0115790:CDS | 45.0% | |
| ! | ATTACTGATGAAGGCTGGTC+TGG | - | chr1_3:34708862-34708881 | Msa0115790:CDS | 45.0% |
| ATCGGTCAACTTTCTGCAGT+AGG | + | chr1_3:34709061-34709080 | None:intergenic | 45.0% | |
| CTGCAGAAAGTTGACCGATA+AGG | - | chr1_3:34709062-34709081 | Msa0115790:intron | 45.0% | |
| AACAGCGGACAATCCCTTAT+CGG | + | chr1_3:34709079-34709098 | None:intergenic | 45.0% | |
| TGCAGTAATGTCACTGACGT+TGG | - | chr1_3:34709297-34709316 | Msa0115790:intron | 45.0% | |
| GCAGTAATGTCACTGACGTT+GGG | - | chr1_3:34709298-34709317 | Msa0115790:intron | 45.0% | |
| CAGTAATGTCACTGACGTTG+GGG | - | chr1_3:34709299-34709318 | Msa0115790:intron | 45.0% | |
| CTGGAGACTTTGATCATTGG+TGG | - | chr1_3:34709432-34709451 | Msa0115790:intron | 45.0% | |
| ! | CTTTGATCATTGGTGGTTGC+CGG | - | chr1_3:34709439-34709458 | Msa0115790:intron | 45.0% |
| ! | TTTGATCATTGGTGGTTGCC+GGG | - | chr1_3:34709440-34709459 | Msa0115790:intron | 45.0% |
| CGACGACGCAATAAAGTTTC+TGG | - | chr1_3:34709470-34709489 | Msa0115790:intron | 45.0% | |
| TGTCCAAAGATCACAGTGGT+TGG | - | chr1_3:34709699-34709718 | Msa0115790:intron | 45.0% | |
| ! | GGTTGGTATAGGCATTCTTG+TGG | - | chr1_3:34709716-34709735 | Msa0115790:intron | 45.0% |
| TGTGGGTAAATGCAGTTACC+TGG | - | chr1_3:34709734-34709753 | Msa0115790:intron | 45.0% | |
| !! | GGCTGGCCTTTGTAATATGT+GGG | + | chr1_3:34709782-34709801 | None:intergenic | 45.0% |
| !! | AGGCTGGCCTTTGTAATATG+TGG | + | chr1_3:34709783-34709802 | None:intergenic | 45.0% |
| AATGGAAACCAGCCTCATCA+AGG | + | chr1_3:34709803-34709822 | None:intergenic | 45.0% | |
| ACCCTAACCCCAACGATTTG+GGG | + | chr1_3:34707835-34707854 | None:intergenic | 50.0% | |
| ! | TGGTTTGCAAGCGATGGCTT+CGG | - | chr1_3:34708000-34708019 | Msa0115790:three_prime_UTR | 50.0% |
| !! | TTCGGTTACAGAGCACCGAA+AGG | - | chr1_3:34708018-34708037 | Msa0115790:three_prime_UTR | 50.0% |
| !! | TTCTGGAGTGGAAGTTGGTG+AGG | - | chr1_3:34708557-34708576 | Msa0115790:CDS | 50.0% |
| GGACTCCTACTCTCAAGTAG+TGG | - | chr1_3:34708578-34708597 | Msa0115790:CDS | 50.0% | |
| CATTAGGTAGGAGAACCCTC+TGG | + | chr1_3:34708659-34708678 | None:intergenic | 50.0% | |
| TCTGCAGTAGGACACATCCA+AGG | + | chr1_3:34709049-34709068 | None:intergenic | 50.0% | |
| ACAACAGCCTTTGGCAACAG+CGG | + | chr1_3:34709094-34709113 | None:intergenic | 50.0% | |
| CCAAAGGCTGTTGTGACTTG+CGG | - | chr1_3:34709100-34709119 | Msa0115790:intron | 50.0% | |
| ! | GGACATTGGTTGCTGTGAAG+AGG | - | chr1_3:34709602-34709621 | Msa0115790:intron | 50.0% |
| TACAAAGGCCAGCCTTGATG+AGG | - | chr1_3:34709788-34709807 | Msa0115790:CDS | 50.0% | |
| !! | ATCACTGTGCTGATTGGCGT+TGG | - | chr1_3:34710023-34710042 | Msa0115790:CDS | 50.0% |
| ACCCTAACCCCAACGATTTG+GGG | + | chr1_3:34707835-34707854 | None:intergenic | 50.0% | |
| ! | TGGTTTGCAAGCGATGGCTT+CGG | - | chr1_3:34708000-34708019 | Msa0115790:three_prime_UTR | 50.0% |
| !! | TTCGGTTACAGAGCACCGAA+AGG | - | chr1_3:34708018-34708037 | Msa0115790:three_prime_UTR | 50.0% |
| !! | TTCTGGAGTGGAAGTTGGTG+AGG | - | chr1_3:34708557-34708576 | Msa0115790:CDS | 50.0% |
| GGACTCCTACTCTCAAGTAG+TGG | - | chr1_3:34708578-34708597 | Msa0115790:CDS | 50.0% | |
| CATTAGGTAGGAGAACCCTC+TGG | + | chr1_3:34708659-34708678 | None:intergenic | 50.0% | |
| TCTGCAGTAGGACACATCCA+AGG | + | chr1_3:34709049-34709068 | None:intergenic | 50.0% | |
| ACAACAGCCTTTGGCAACAG+CGG | + | chr1_3:34709094-34709113 | None:intergenic | 50.0% | |
| CCAAAGGCTGTTGTGACTTG+CGG | - | chr1_3:34709100-34709119 | Msa0115790:intron | 50.0% | |
| ! | GGACATTGGTTGCTGTGAAG+AGG | - | chr1_3:34709602-34709621 | Msa0115790:intron | 50.0% |
| TACAAAGGCCAGCCTTGATG+AGG | - | chr1_3:34709788-34709807 | Msa0115790:CDS | 50.0% | |
| !! | ATCACTGTGCTGATTGGCGT+TGG | - | chr1_3:34710023-34710042 | Msa0115790:CDS | 50.0% |
| AGCCCCAAATCGTTGGGGTT+AGG | - | chr1_3:34707830-34707849 | Msa0115790:three_prime_UTR | 55.0% | |
| GCCCCAAATCGTTGGGGTTA+GGG | - | chr1_3:34707831-34707850 | Msa0115790:three_prime_UTR | 55.0% | |
| CGACGAGCTTCGTTCGATTC+TGG | - | chr1_3:34707938-34707957 | Msa0115790:three_prime_UTR | 55.0% | |
| AAGAAGCTTTCCGCACGTGC+CGG | - | chr1_3:34708041-34708060 | Msa0115790:three_prime_UTR | 55.0% | |
| GGCGGATAGGTTCACATGCT+TGG | - | chr1_3:34708085-34708104 | Msa0115790:three_prime_UTR | 55.0% | |
| CTCGTGCACCCCATAACTCT+CGG | - | chr1_3:34708718-34708737 | Msa0115790:CDS | 55.0% | |
| GGATTGTCCGCTGTTGCCAA+AGG | - | chr1_3:34709084-34709103 | Msa0115790:intron | 55.0% | |
| CCGCAAGTCACAACAGCCTT+TGG | + | chr1_3:34709103-34709122 | None:intergenic | 55.0% | |
| GGGCTGATAAGCCTTGCAAG+TGG | - | chr1_3:34709240-34709259 | Msa0115790:intron | 55.0% | |
| GCCTTGCAAGTGGTTGCCAA+CGG | - | chr1_3:34709250-34709269 | Msa0115790:intron | 55.0% | |
| TCCGTTGGCAACCACTTGCA+AGG | + | chr1_3:34709254-34709273 | None:intergenic | 55.0% | |
| ATGCAGAAACCTTGAGGCGC+TGG | - | chr1_3:34709581-34709600 | Msa0115790:intron | 55.0% | |
| !! | AACCTTGAGGCGCTGGACAT+TGG | - | chr1_3:34709588-34709607 | Msa0115790:intron | 55.0% |
| AACCAATGTCCAGCGCCTCA+AGG | + | chr1_3:34709593-34709612 | None:intergenic | 55.0% | |
| GAAACCAGCCTCATCAAGGC+TGG | + | chr1_3:34709799-34709818 | None:intergenic | 55.0% | |
| AGCCCCAAATCGTTGGGGTT+AGG | - | chr1_3:34707830-34707849 | Msa0115790:three_prime_UTR | 55.0% | |
| GCCCCAAATCGTTGGGGTTA+GGG | - | chr1_3:34707831-34707850 | Msa0115790:three_prime_UTR | 55.0% | |
| CGACGAGCTTCGTTCGATTC+TGG | - | chr1_3:34707938-34707957 | Msa0115790:three_prime_UTR | 55.0% | |
| AAGAAGCTTTCCGCACGTGC+CGG | - | chr1_3:34708041-34708060 | Msa0115790:three_prime_UTR | 55.0% | |
| GGCGGATAGGTTCACATGCT+TGG | - | chr1_3:34708085-34708104 | Msa0115790:three_prime_UTR | 55.0% | |
| CTCGTGCACCCCATAACTCT+CGG | - | chr1_3:34708718-34708737 | Msa0115790:CDS | 55.0% | |
| GGATTGTCCGCTGTTGCCAA+AGG | - | chr1_3:34709084-34709103 | Msa0115790:intron | 55.0% | |
| CCGCAAGTCACAACAGCCTT+TGG | + | chr1_3:34709103-34709122 | None:intergenic | 55.0% | |
| GGGCTGATAAGCCTTGCAAG+TGG | - | chr1_3:34709240-34709259 | Msa0115790:intron | 55.0% | |
| GCCTTGCAAGTGGTTGCCAA+CGG | - | chr1_3:34709250-34709269 | Msa0115790:intron | 55.0% | |
| TCCGTTGGCAACCACTTGCA+AGG | + | chr1_3:34709254-34709273 | None:intergenic | 55.0% | |
| ATGCAGAAACCTTGAGGCGC+TGG | - | chr1_3:34709581-34709600 | Msa0115790:intron | 55.0% | |
| !! | AACCTTGAGGCGCTGGACAT+TGG | - | chr1_3:34709588-34709607 | Msa0115790:intron | 55.0% |
| AACCAATGTCCAGCGCCTCA+AGG | + | chr1_3:34709593-34709612 | None:intergenic | 55.0% | |
| GAAACCAGCCTCATCAAGGC+TGG | + | chr1_3:34709799-34709818 | None:intergenic | 55.0% | |
| TTGCGTCGTCGGAGACATCC+CGG | + | chr1_3:34709461-34709480 | None:intergenic | 60.0% | |
| AAGGCCAGCCTTGATGAGGC+TGG | - | chr1_3:34709792-34709811 | Msa0115790:CDS | 60.0% | |
| TTGCGTCGTCGGAGACATCC+CGG | + | chr1_3:34709461-34709480 | None:intergenic | 60.0% | |
| AAGGCCAGCCTTGATGAGGC+TGG | - | chr1_3:34709792-34709811 | Msa0115790:CDS | 60.0% | |
| CATGTGAGGTCCGGCACGTG+CGG | + | chr1_3:34708054-34708073 | None:intergenic | 65.0% | |
| CATGTGAGGTCCGGCACGTG+CGG | + | chr1_3:34708054-34708073 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 34707795 | 34710209 | 34707795 | ID=Msa0115790;Name=Msa0115790 |
| chr1_3 | mRNA | 34707795 | 34710209 | 34707795 | ID=Msa0115790-mRNA-1;Parent=Msa0115790;Name=Msa0115790-mRNA-1;_AED=0.02;_eAED=0.02;_QI=78|1|1|1|1|1|2|325|416 |
| chr1_3 | exon | 34707795 | 34709012 | 34707795 | ID=Msa0115790-mRNA-1:exon:11014;Parent=Msa0115790-mRNA-1 |
| chr1_3 | exon | 34709774 | 34710209 | 34709774 | ID=Msa0115790-mRNA-1:exon:11013;Parent=Msa0115790-mRNA-1 |
| chr1_3 | five_prime_UTR | 34710132 | 34710209 | 34710132 | ID=Msa0115790-mRNA-1:five_prime_utr;Parent=Msa0115790-mRNA-1 |
| chr1_3 | CDS | 34709774 | 34710131 | 34709774 | ID=Msa0115790-mRNA-1:cds;Parent=Msa0115790-mRNA-1 |
| chr1_3 | CDS | 34708120 | 34709012 | 34708120 | ID=Msa0115790-mRNA-1:cds;Parent=Msa0115790-mRNA-1 |
| chr1_3 | three_prime_UTR | 34707795 | 34708119 | 34707795 | ID=Msa0115790-mRNA-1:three_prime_utr;Parent=Msa0115790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
