Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117240 | XP_013449742.1 | 98.783 | 411 | 5 | 0 | 1 | 411 | 1 | 411 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117240 | sp|Q99633|PRP18_HUMAN | 35.714 | 392 | 186 | 9 | 1 | 376 | 1 | 342 | 1.44e-64 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117240 | A0A072UD53 | 98.783 | 411 | 5 | 0 | 1 | 411 | 1 | 411 | 0.0 | 837 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012200 | Msa1117240 | 0.807039 | 6.141937e-50 | -8.615850e-47 |
| Msa0020410 | Msa1117240 | 0.810987 | 8.769521e-51 | -8.615850e-47 |
| Msa0026910 | Msa1117240 | 0.830257 | 3.252167e-55 | -8.615850e-47 |
| Msa0032470 | Msa1117240 | 0.822048 | 2.918269e-53 | -8.615850e-47 |
| Msa0043980 | Msa1117240 | 0.835143 | 1.991539e-56 | -8.615850e-47 |
| Msa0044000 | Msa1117240 | 0.864222 | 1.420157e-64 | -8.615850e-47 |
| Msa0071250 | Msa1117240 | 0.810838 | 9.443929e-51 | -8.615850e-47 |
| Msa0072420 | Msa1117240 | 0.835360 | 1.755900e-56 | -8.615850e-47 |
| Msa0079070 | Msa1117240 | 0.826661 | 2.400223e-54 | -8.615850e-47 |
| Msa0083280 | Msa1117240 | 0.820053 | 8.405928e-53 | -8.615850e-47 |
| Msa0086420 | Msa1117240 | 0.803996 | 2.670240e-49 | -8.615850e-47 |
| Msa0090360 | Msa1117240 | 0.807609 | 4.649100e-50 | -8.615850e-47 |
| Msa0090570 | Msa1117240 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
| Msa0101500 | Msa1117240 | -0.824865 | 6.402822e-54 | -8.615850e-47 |
| Msa0106850 | Msa1117240 | 0.838395 | 2.949552e-57 | -8.615850e-47 |
| Msa0108140 | Msa1117240 | 0.809048 | 2.293343e-50 | -8.615850e-47 |
| Msa0108760 | Msa1117240 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
| Msa0115790 | Msa1117240 | 0.822652 | 2.112316e-53 | -8.615850e-47 |
| Msa0604290 | Msa1117240 | 0.822238 | 2.636488e-53 | -8.615850e-47 |
| Msa0624060 | Msa1117240 | 0.812127 | 4.957304e-51 | -8.615850e-47 |
| Msa0665860 | Msa1117240 | 0.830270 | 3.228808e-55 | -8.615850e-47 |
| Msa0669410 | Msa1117240 | 0.820196 | 7.794907e-53 | -8.615850e-47 |
| Msa0676130 | Msa1117240 | 0.819350 | 1.216430e-52 | -8.615850e-47 |
| Msa0676180 | Msa1117240 | 0.819588 | 1.073500e-52 | -8.615850e-47 |
| Msa0682680 | Msa1117240 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
| Msa0689320 | Msa1117240 | 0.806998 | 6.263730e-50 | -8.615850e-47 |
| Msa0690860 | Msa1117240 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0711100 | Msa1117240 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
| Msa0740510 | Msa1117240 | 0.800522 | 1.385809e-48 | -8.615850e-47 |
| Msa0741440 | Msa1117240 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa0802830 | Msa1117240 | 0.819551 | 1.094214e-52 | -8.615850e-47 |
| Msa0818060 | Msa1117240 | 0.810789 | 9.679050e-51 | -8.615850e-47 |
| Msa0820770 | Msa1117240 | 0.805096 | 1.574315e-49 | -8.615850e-47 |
| Msa0820850 | Msa1117240 | 0.823827 | 1.122919e-53 | -8.615850e-47 |
| Msa0832150 | Msa1117240 | 0.821994 | 3.002422e-53 | -8.615850e-47 |
| Msa0832340 | Msa1117240 | 0.829770 | 4.274662e-55 | -8.615850e-47 |
| Msa0123560 | Msa1117240 | 0.813864 | 2.062991e-51 | -8.615850e-47 |
| Msa0127650 | Msa1117240 | 0.843177 | 1.644400e-58 | -8.615850e-47 |
| Msa0127800 | Msa1117240 | 0.849138 | 3.919051e-60 | -8.615850e-47 |
| Msa0148080 | Msa1117240 | 0.818098 | 2.340324e-52 | -8.615850e-47 |
| Msa0173070 | Msa1117240 | 0.801555 | 8.520592e-49 | -8.615850e-47 |
| Msa0178570 | Msa1117240 | 0.818870 | 1.563931e-52 | -8.615850e-47 |
| Msa0184040 | Msa1117240 | 0.804157 | 2.471826e-49 | -8.615850e-47 |
| Msa0194950 | Msa1117240 | -0.837320 | 5.573332e-57 | -8.615850e-47 |
| Msa0204960 | Msa1117240 | 0.826894 | 2.111592e-54 | -8.615850e-47 |
| Msa0207040 | Msa1117240 | -0.810069 | 1.384202e-50 | -8.615850e-47 |
| Msa0219590 | Msa1117240 | 0.817265 | 3.606199e-52 | -8.615850e-47 |
| Msa0236960 | Msa1117240 | -0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0376910 | Msa1117240 | 0.800285 | 1.548123e-48 | -8.615850e-47 |
| Msa0387820 | Msa1117240 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
| Msa0395750 | Msa1117240 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0398670 | Msa1117240 | 0.858848 | 6.216278e-63 | -8.615850e-47 |
| Msa0454360 | Msa1117240 | 0.837345 | 5.491182e-57 | -8.615850e-47 |
| Msa0457960 | Msa1117240 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa0475600 | Msa1117240 | 0.813899 | 2.026400e-51 | -8.615850e-47 |
| Msa0980880 | Msa1117240 | 0.802521 | 5.394368e-49 | -8.615850e-47 |
| Msa1002360 | Msa1117240 | 0.808933 | 2.427939e-50 | -8.615850e-47 |
| Msa1002850 | Msa1117240 | 0.803755 | 2.996866e-49 | -8.615850e-47 |
| Msa1031660 | Msa1117240 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa1035750 | Msa1117240 | 0.808352 | 3.230351e-50 | -8.615850e-47 |
| Msa1036300 | Msa1117240 | 0.814034 | 1.892382e-51 | -8.615850e-47 |
| Msa1070720 | Msa1117240 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
| Msa1075650 | Msa1117240 | 0.800957 | 1.129557e-48 | -8.615850e-47 |
| Msa1077130 | Msa1117240 | 0.857617 | 1.444609e-62 | -8.615850e-47 |
| Msa1077200 | Msa1117240 | 0.851096 | 1.108819e-60 | -8.615850e-47 |
| Msa0240920 | Msa1117240 | 0.827841 | 1.252062e-54 | -8.615850e-47 |
| Msa0243090 | Msa1117240 | 0.805967 | 1.033730e-49 | -8.615850e-47 |
| Msa0272300 | Msa1117240 | 0.821823 | 3.288839e-53 | -8.615850e-47 |
| Msa0285330 | Msa1117240 | 0.808794 | 2.599285e-50 | -8.615850e-47 |
| Msa0287410 | Msa1117240 | 0.818789 | 1.631813e-52 | -8.615850e-47 |
| Msa0305410 | Msa1117240 | 0.843594 | 1.272700e-58 | -8.615850e-47 |
| Msa0315440 | Msa1117240 | -0.817775 | 2.767663e-52 | -8.615850e-47 |
| Msa0316390 | Msa1117240 | 0.815838 | 7.528161e-52 | -8.615850e-47 |
| Msa0317940 | Msa1117240 | 0.801118 | 1.047021e-48 | -8.615850e-47 |
| Msa0326110 | Msa1117240 | 0.805466 | 1.317249e-49 | -8.615850e-47 |
| Msa0335060 | Msa1117240 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0342410 | Msa1117240 | 0.801623 | 8.250848e-49 | -8.615850e-47 |
| Msa1109680 | Msa1117240 | 0.830426 | 2.957178e-55 | -8.615850e-47 |
| Msa1117240 | Msa1122150 | 0.843410 | 1.425119e-58 | -8.615850e-47 |
| Msa1117240 | Msa1158640 | -0.829739 | 4.349015e-55 | -8.615850e-47 |
| Msa1117240 | Msa1160560 | 0.819514 | 1.116238e-52 | -8.615850e-47 |
| Msa1117240 | Msa1167340 | 0.807534 | 4.824033e-50 | -8.615850e-47 |
| Msa1117240 | Msa1181250 | 0.817559 | 3.096861e-52 | -8.615850e-47 |
| Msa1117240 | Msa1181330 | 0.808869 | 2.505389e-50 | -8.615850e-47 |
| Msa1117240 | Msa1181910 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa1117240 | Msa1244600 | 0.816876 | 4.412249e-52 | -8.615850e-47 |
| Msa1117240 | Msa1250530 | 0.807183 | 5.723245e-50 | -8.615850e-47 |
| Msa1117240 | Msa1257750 | 0.812050 | 5.151043e-51 | -8.615850e-47 |
| Msa1117240 | Msa1271130 | 0.815464 | 9.120502e-52 | -8.615850e-47 |
| Msa1117240 | Msa1279400 | 0.826287 | 2.946587e-54 | -8.615850e-47 |
| Msa1117240 | Msa1280320 | 0.804841 | 1.780206e-49 | -8.615850e-47 |
| Msa1117240 | Msa1305660 | 0.819452 | 1.153007e-52 | -8.615850e-47 |
| Msa1117240 | Msa1305810 | 0.821632 | 3.641824e-53 | -8.615850e-47 |
| Msa1117240 | Msa1331320 | 0.827779 | 1.295417e-54 | -8.615850e-47 |
| Msa1117240 | Msa1341060 | 0.821904 | 3.150534e-53 | -8.615850e-47 |
| Msa1117240 | Msa1347760 | 0.812349 | 4.432803e-51 | -8.615850e-47 |
| Msa1117240 | Msa1357620 | 0.810731 | 9.961238e-51 | -8.615850e-47 |
| Msa1117240 | Msa1372240 | 0.817993 | 2.471195e-52 | -8.615850e-47 |
| Msa1117240 | Msa1374470 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa1117240 | Msa1378410 | 0.810267 | 1.255125e-50 | -8.615850e-47 |
| Msa1117240 | Msa1392980 | 0.810168 | 1.317858e-50 | -8.615850e-47 |
| Msa1117240 | Msa1401990 | 0.834142 | 3.555809e-56 | -8.615850e-47 |
| Msa1117240 | Msa1411020 | 0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa1117240 | Msa1419690 | 0.821744 | 3.430840e-53 | -8.615850e-47 |
| Msa1117240 | Msa1419840 | 0.829692 | 4.464088e-55 | -8.615850e-47 |
| Msa1117240 | Msa1423390 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa1117240 | Msa1433390 | 0.804633 | 1.967024e-49 | -8.615850e-47 |
| Msa1117240 | Msa1434350 | 0.800804 | 1.213475e-48 | -8.615850e-47 |
| Msa1117240 | Msa1434420 | -0.831721 | 1.421315e-55 | -8.615850e-47 |
| Msa1117240 | Msa1437730 | 0.810857 | 9.355665e-51 | -8.615850e-47 |
| Msa1117240 | Msa1451160 | 0.802000 | 6.905623e-49 | -8.615850e-47 |
| Msa1117240 | Msa1457620 | 0.807517 | 4.862783e-50 | -8.615850e-47 |
| Msa0484720 | Msa1117240 | 0.821087 | 4.865839e-53 | -8.615850e-47 |
| Msa0512340 | Msa1117240 | 0.835460 | 1.657122e-56 | -8.615850e-47 |
| Msa0521270 | Msa1117240 | 0.829726 | 4.379824e-55 | -8.615850e-47 |
| Msa0527540 | Msa1117240 | 0.835694 | 1.445722e-56 | -8.615850e-47 |
| Msa0530560 | Msa1117240 | 0.819880 | 9.205698e-53 | -8.615850e-47 |
| Msa0531530 | Msa1117240 | 0.826823 | 2.195137e-54 | -8.615850e-47 |
| Msa0535630 | Msa1117240 | 0.833595 | 4.874240e-56 | -8.615850e-47 |
| Msa0542260 | Msa1117240 | 0.824817 | 6.572000e-54 | -8.615850e-47 |
| Msa0547160 | Msa1117240 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0548240 | Msa1117240 | 0.856898 | 2.356107e-62 | -8.615850e-47 |
| Msa0566350 | Msa1117240 | 0.801287 | 9.669976e-49 | -8.615850e-47 |
| Msa0578860 | Msa1117240 | 0.813598 | 2.360372e-51 | -8.615850e-47 |
| Msa0581010 | Msa1117240 | 0.813147 | 2.965395e-51 | -8.615850e-47 |
| Msa0587910 | Msa1117240 | 0.821782 | 3.361907e-53 | -8.615850e-47 |
| Msa0849030 | Msa1117240 | 0.822840 | 1.909460e-53 | -8.615850e-47 |
| Msa0849040 | Msa1117240 | 0.821366 | 4.194628e-53 | -8.615850e-47 |
| Msa0861090 | Msa1117240 | 0.802700 | 4.952893e-49 | -8.615850e-47 |
| Msa0861130 | Msa1117240 | 0.813440 | 2.557175e-51 | -8.615850e-47 |
| Msa0943970 | Msa1117240 | 0.806496 | 7.998079e-50 | -8.615850e-47 |
| Msa0963270 | Msa1117240 | 0.811121 | 8.204116e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117240 | MtrunA17_Chr7g0259901 | 98.783 | 411 | 5 | 0 | 1 | 411 | 1 | 411 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117240 | AT1G03140.1 | 70.519 | 424 | 108 | 3 | 1 | 411 | 1 | 420 | 0.0 | 563 |
| Msa1117240 | AT1G54590.1 | 65.068 | 292 | 77 | 7 | 122 | 407 | 85 | 357 | 2.96e-126 | 369 |
Find 139 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATATGATAATGTCAATTA+AGG | 0.185033 | 7_3:-65535832 | None:intergenic |
| CTGTATGAGGCGAGATTATC+TGG | 0.294838 | 7_3:+65535456 | Msa1117240:CDS |
| AAACAACCTGTGACGTTATT+CGG | 0.305283 | 7_3:+65532130 | Msa1117240:CDS |
| TTTCTTGCCGCCGGTTTCTT+CGG | 0.312109 | 7_3:-65531849 | None:intergenic |
| GCATGTACTTCAGGTTCTTC+AGG | 0.319015 | 7_3:+65535396 | Msa1117240:intron |
| GATTTGTTTCTGTTGGATTT+CGG | 0.325568 | 7_3:-65531885 | None:intergenic |
| AGCAGTTGAGTTTAACAGTT+TGG | 0.335075 | 7_3:+65535693 | Msa1117240:CDS |
| CGGCGGATGACTTCTTGTTT+AGG | 0.340183 | 7_3:-65532094 | None:intergenic |
| CTTAAATACGTTCTCAAAGC+TGG | 0.353113 | 7_3:+65532181 | Msa1117240:CDS |
| CTGGCCTATCGGTGTTACTA+TGG | 0.360585 | 7_3:+65535522 | Msa1117240:CDS |
| TGAGAAGCTCTTGCTTTAGA+AGG | 0.370756 | 7_3:-65531808 | None:intergenic |
| GTGTGATGAGGATAAGATTT+TGG | 0.371707 | 7_3:+65532450 | Msa1117240:CDS |
| TAGAACTGTAAAGAAGATTC+AGG | 0.374392 | 7_3:-65536035 | None:intergenic |
| AGAAGGTCCATCTAGGGTTT+CGG | 0.380166 | 7_3:-65531791 | None:intergenic |
| TTAAACTCAACTGCTTTAGA+TGG | 0.395372 | 7_3:-65535685 | None:intergenic |
| GTTTATAATATAGTCAGTTC+AGG | 0.401333 | 7_3:+65535964 | Msa1117240:three_prime_UTR |
| TTCGTCGGGGAGGGAAGCGC+TGG | 0.401745 | 7_3:-65532047 | None:intergenic |
| TGTTCAATTTCCACCCCATT+TGG | 0.405645 | 7_3:+65536086 | Msa1117240:three_prime_UTR |
| CTGCAATGGACCATTATATC+AGG | 0.408980 | 7_3:+65535479 | Msa1117240:CDS |
| TTGCTTTAGAAGGTCCATCT+AGG | 0.412477 | 7_3:-65531798 | None:intergenic |
| TCACAGGTTGTTTGAGAAAC+CGG | 0.418075 | 7_3:-65532120 | None:intergenic |
| CGGAGAAGCGGACGGCTAAA+GGG | 0.420729 | 7_3:+65532530 | Msa1117240:CDS |
| AAAATAAATTAACTATCTCT+TGG | 0.424273 | 7_3:-65535808 | None:intergenic |
| CGGTTTCTTCGGCTAGGGAT+TGG | 0.425410 | 7_3:-65531838 | None:intergenic |
| AGTTTAACAGTTTGGCAAAT+GGG | 0.428747 | 7_3:+65535701 | Msa1117240:CDS |
| CGATAGCCAGCCTGATATAA+TGG | 0.430348 | 7_3:-65535489 | None:intergenic |
| TCGGCAGGCACTAATGTTGA+TGG | 0.435972 | 7_3:+65535426 | Msa1117240:CDS |
| TTCGGACGACGGTGCGGTGG+TGG | 0.439684 | 7_3:-65531773 | None:intergenic |
| TTCAGTGTTCTGATCGGAAA+AGG | 0.440473 | 7_3:-65531743 | None:intergenic |
| AGTCAGTTCAGGCGCTGTTT+CGG | 0.442518 | 7_3:+65535975 | Msa1117240:three_prime_UTR |
| TGGCTATCGGGAATGCTCCC+TGG | 0.443575 | 7_3:+65535503 | Msa1117240:CDS |
| ACGGAGAAGCGGACGGCTAA+AGG | 0.445518 | 7_3:+65532529 | Msa1117240:CDS |
| GAGTTTAACAGTTTGGCAAA+TGG | 0.450367 | 7_3:+65535700 | Msa1117240:CDS |
| CCGTCGTCCGAAACCCTAGA+TGG | 0.452345 | 7_3:+65531784 | Msa1117240:exon |
| AAGAAGTCATCCGCCGTCTC+CGG | 0.452806 | 7_3:+65532101 | Msa1117240:CDS |
| TTGAGGAAGAGGCAGAAGAC+GGG | 0.457591 | 7_3:+65532271 | Msa1117240:CDS |
| GCTGGATGAAGCAGCGGCGG+CGG | 0.458540 | 7_3:-65532029 | None:intergenic |
| GTATCGCGCACACTGCTTGA+AGG | 0.459806 | 7_3:-65532569 | None:intergenic |
| GAGGATGGTGATGGTGGTGC+TGG | 0.465798 | 7_3:+65532340 | Msa1117240:CDS |
| ATTGCACGGATTCTCAATAC+TGG | 0.466817 | 7_3:-65535866 | None:intergenic |
| GCTGTTGAATGAGTGGAAAC+AGG | 0.467823 | 7_3:+65532486 | Msa1117240:CDS |
| AGTCGTCTGAGGAGAGGCTT+AGG | 0.468760 | 7_3:+65535773 | Msa1117240:CDS |
| CATTATATCAGGCTGGCTAT+CGG | 0.468919 | 7_3:+65535490 | Msa1117240:CDS |
| CATATGATAATGTCAATTAA+GGG | 0.469576 | 7_3:-65535831 | None:intergenic |
| TATGGGGTAACAAGACCAAA+TGG | 0.469893 | 7_3:-65536101 | None:intergenic |
| AGCGGCGGCGGTGACGGAGG+AGG | 0.470754 | 7_3:-65532017 | None:intergenic |
| TGCTTTAGAAGGTCCATCTA+GGG | 0.472036 | 7_3:-65531797 | None:intergenic |
| GGACGACGGTGCGGTGGTGG+TGG | 0.474434 | 7_3:-65531770 | None:intergenic |
| ATTATATCAGGCTGGCTATC+GGG | 0.475178 | 7_3:+65535491 | Msa1117240:CDS |
| GACGGCTAAAGGGAAGTCTA+TGG | 0.476462 | 7_3:+65532540 | Msa1117240:CDS |
| CAATCCCTAGCCGAAGAAAC+CGG | 0.477260 | 7_3:+65531839 | Msa1117240:CDS |
| TTAGCAGAAGAGAGATTTAG+TGG | 0.482256 | 7_3:+65535742 | Msa1117240:CDS |
| GGGAATGCTCCCTGGCCTAT+CGG | 0.486347 | 7_3:+65535511 | Msa1117240:CDS |
| CTATATTATAAACTAATACT+AGG | 0.491395 | 7_3:-65535954 | None:intergenic |
| TCCTACAAAACTTAAACAGC+GGG | 0.493480 | 7_3:-65532597 | None:intergenic |
| GATGATGATTTGAGTGATTG+TGG | 0.495482 | 7_3:+65532364 | Msa1117240:CDS |
| CTGCTTTAGATGGCAGTGTC+GGG | 0.496151 | 7_3:-65535675 | None:intergenic |
| TGATTTCTTGCGTGATATTG+CGG | 0.497819 | 7_3:+65532246 | Msa1117240:CDS |
| GAGGATGGTGCTGCTGAGGA+TGG | 0.497989 | 7_3:+65532325 | Msa1117240:CDS |
| AGGTTCTTCAGGATGACATT+CGG | 0.502212 | 7_3:+65535407 | Msa1117240:intron |
| TGAAGCAGCGGCGGCGGTGA+CGG | 0.507390 | 7_3:-65532023 | None:intergenic |
| ATGGGGTAACAAGACCAAAT+GGG | 0.507411 | 7_3:-65536100 | None:intergenic |
| GTTGGTTGATGAGGTTGTTA+CGG | 0.509127 | 7_3:-65531990 | None:intergenic |
| TGCCGCCGGTTTCTTCGGCT+AGG | 0.513870 | 7_3:-65531844 | None:intergenic |
| GAGAATCCGTGCAATGTATG+AGG | 0.514561 | 7_3:+65535874 | Msa1117240:three_prime_UTR |
| TAGTGGTGGTGATAATGATA+AGG | 0.515615 | 7_3:+65532393 | Msa1117240:CDS |
| CATAGTAACACCGATAGGCC+AGG | 0.517646 | 7_3:-65535521 | None:intergenic |
| TAAGGATTTGAAAAGGATGA+AGG | 0.521027 | 7_3:+65532411 | Msa1117240:CDS |
| ATTTCTCCTCATACATTGCA+CGG | 0.521071 | 7_3:-65535880 | None:intergenic |
| GTTGCGTGAGATGGCGGAGA+CGG | 0.528632 | 7_3:+65532510 | Msa1117240:CDS |
| GGTGGAGACGGTGTCGGAGG+TGG | 0.529873 | 7_3:-65531969 | None:intergenic |
| AGTGATTGTGGTGGATCTAG+TGG | 0.530233 | 7_3:+65532376 | Msa1117240:CDS |
| GCGAGATTATCTGGCTGCAA+TGG | 0.530625 | 7_3:+65535465 | Msa1117240:CDS |
| CAAAGCTGGATTGTTTGAAG+TGG | 0.534244 | 7_3:+65532195 | Msa1117240:CDS |
| AATTAACTATCTCTTGGAGC+AGG | 0.536566 | 7_3:-65535802 | None:intergenic |
| CCTATCGGTGTTACTATGGT+TGG | 0.537411 | 7_3:+65535526 | Msa1117240:CDS |
| CTTCTTGTTTAGGAAGGACG+AGG | 0.539570 | 7_3:-65532084 | None:intergenic |
| ATAATGATAAGGATTTGAAA+AGG | 0.540471 | 7_3:+65532404 | Msa1117240:CDS |
| TTAAGAAGCTGTTGAATGAG+TGG | 0.541386 | 7_3:+65532479 | Msa1117240:CDS |
| TCTTCAGGATGACATTCGGC+AGG | 0.544712 | 7_3:+65535411 | Msa1117240:CDS |
| GTTGAGGAAGAGGCAGAAGA+CGG | 0.547478 | 7_3:+65532270 | Msa1117240:CDS |
| GGTGCTGCTGAGGATGGTGA+TGG | 0.548826 | 7_3:+65532331 | Msa1117240:CDS |
| TAGCAGAAGAGAGATTTAGT+GGG | 0.549817 | 7_3:+65535743 | Msa1117240:CDS |
| AAGCGGCAGAAGGCGGAGGA+TGG | 0.550000 | 7_3:+65532310 | Msa1117240:CDS |
| ACTGCTTTAGATGGCAGTGT+CGG | 0.551623 | 7_3:-65535676 | None:intergenic |
| TTCCTACAAAACTTAAACAG+CGG | 0.554797 | 7_3:-65532598 | None:intergenic |
| GGAGAGAAACTTAAAACCAA+GGG | 0.556012 | 7_3:-65535933 | None:intergenic |
| GGATGACTTCTTGTTTAGGA+AGG | 0.558895 | 7_3:-65532090 | None:intergenic |
| GGTTTATTCAGTGTTCTGAT+CGG | 0.561125 | 7_3:-65531749 | None:intergenic |
| TTTGAAGAATTTCTTGCCGC+CGG | 0.562591 | 7_3:-65531858 | None:intergenic |
| TGATGGTTGACTGCTGTATG+AGG | 0.563302 | 7_3:+65535443 | Msa1117240:CDS |
| AGCGCTGGATGAAGCAGCGG+CGG | 0.566319 | 7_3:-65532032 | None:intergenic |
| GGAGGAAGCGTTGGTTGATG+AGG | 0.570703 | 7_3:-65531999 | None:intergenic |
| GGTTTCGGACGACGGTGCGG+TGG | 0.572672 | 7_3:-65531776 | None:intergenic |
| TAGGAAGCGGCAGAAGGCGG+AGG | 0.573088 | 7_3:+65532306 | Msa1117240:CDS |
| GAGTGATAGGAAGCGGCAGA+AGG | 0.573616 | 7_3:+65532300 | Msa1117240:CDS |
| ACAGGAGTTGCGTGAGATGG+CGG | 0.582423 | 7_3:+65532504 | Msa1117240:CDS |
| GCTGCTGAGGATGGTGATGG+TGG | 0.582674 | 7_3:+65532334 | Msa1117240:CDS |
| GGTGACGGAGGAGGAAGCGT+TGG | 0.588639 | 7_3:-65532008 | None:intergenic |
| AGCAGAAGAGAGATTTAGTG+GGG | 0.589925 | 7_3:+65535744 | Msa1117240:CDS |
| AATGGACCATTATATCAGGC+TGG | 0.593837 | 7_3:+65535483 | Msa1117240:CDS |
| ATATTGCGGAGTTGAGGAAG+AGG | 0.597099 | 7_3:+65532260 | Msa1117240:CDS |
| GAAACAGGAGTTGCGTGAGA+TGG | 0.597500 | 7_3:+65532501 | Msa1117240:CDS |
| ACGATGATGCGAGATTCGAT+CGG | 0.597601 | 7_3:+65532158 | Msa1117240:CDS |
| AGCAGCGGCGGCGGTGACGG+AGG | 0.599033 | 7_3:-65532020 | None:intergenic |
| TGGGGTAACAAGACCAAATG+GGG | 0.601668 | 7_3:-65536099 | None:intergenic |
| GGCGGAGGATGGTGCTGCTG+AGG | 0.603000 | 7_3:+65532321 | Msa1117240:CDS |
| AGATGGCGGAGACGGAGAAG+CGG | 0.603954 | 7_3:+65532518 | Msa1117240:CDS |
| GGCGGAGACGGAGAAGCGGA+CGG | 0.607467 | 7_3:+65532522 | Msa1117240:CDS |
| TGAGGAAGAGGCAGAAGACG+GGG | 0.610880 | 7_3:+65532272 | Msa1117240:CDS |
| TGAAGTGGATAGTGATATGA+CGG | 0.612285 | 7_3:+65532210 | Msa1117240:CDS |
| GATTGTGGTGGATCTAGTGG+TGG | 0.612515 | 7_3:+65532379 | Msa1117240:CDS |
| AGTACTTACAATCAGTGAAG+AGG | 0.612562 | 7_3:+65535626 | Msa1117240:CDS |
| TGATAGGAAGCGGCAGAAGG+CGG | 0.617704 | 7_3:+65532303 | Msa1117240:CDS |
| TCTTCGCCGAATAACGTCAC+AGG | 0.618610 | 7_3:-65532136 | None:intergenic |
| CCATCTAGGGTTTCGGACGA+CGG | 0.619896 | 7_3:-65531784 | None:intergenic |
| GGAAGCGCTGGATGAAGCAG+CGG | 0.620240 | 7_3:-65532035 | None:intergenic |
| AGGAGAGAAACTTAAAACCA+AGG | 0.620790 | 7_3:-65535934 | None:intergenic |
| TGCGTGATATTGCGGAGTTG+AGG | 0.622575 | 7_3:+65532254 | Msa1117240:CDS |
| TGAGGTTGTTACGGTGGAGA+CGG | 0.623480 | 7_3:-65531981 | None:intergenic |
| GTGGATAGTGATATGACGGA+AGG | 0.630455 | 7_3:+65532214 | Msa1117240:CDS |
| GCAATCAGTCGTCTGAGGAG+AGG | 0.632643 | 7_3:+65535767 | Msa1117240:CDS |
| GTTTGAGAAACCGGAGACGG+CGG | 0.644055 | 7_3:-65532111 | None:intergenic |
| TGTTACGGTGGAGACGGTGT+CGG | 0.645226 | 7_3:-65531975 | None:intergenic |
| ATAGTAACACCGATAGGCCA+GGG | 0.645385 | 7_3:-65535520 | None:intergenic |
| GATGATTTGAGTGATTGTGG+TGG | 0.645582 | 7_3:+65532367 | Msa1117240:CDS |
| TACGGTGGAGACGGTGTCGG+AGG | 0.648175 | 7_3:-65531972 | None:intergenic |
| GAGAAACTTAAAACCAAGGG+GGG | 0.649505 | 7_3:-65535930 | None:intergenic |
| GTTGTTTGAGAAACCGGAGA+CGG | 0.656084 | 7_3:-65532114 | None:intergenic |
| CCAACCATAGTAACACCGAT+AGG | 0.659700 | 7_3:-65535526 | None:intergenic |
| GCAGAAGAGAGATTTAGTGG+GGG | 0.669816 | 7_3:+65535745 | Msa1117240:CDS |
| GGTTGATGAGGTTGTTACGG+TGG | 0.676360 | 7_3:-65531987 | None:intergenic |
| TAGGGTTTCGGACGACGGTG+CGG | 0.679728 | 7_3:-65531779 | None:intergenic |
| TGTTTCGGTAAGCACTACAA+TGG | 0.685866 | 7_3:+65535990 | Msa1117240:three_prime_UTR |
| TTTCGATGAGCTGTGTGATG+AGG | 0.689854 | 7_3:+65532438 | Msa1117240:CDS |
| GAGAGAAACTTAAAACCAAG+GGG | 0.695446 | 7_3:-65535932 | None:intergenic |
| GGTAACAAGACCAAATGGGG+TGG | 0.698675 | 7_3:-65536096 | None:intergenic |
| TCCCTAGCCGAAGAAACCGG+CGG | 0.703034 | 7_3:+65531842 | Msa1117240:CDS |
| AGAGAAACTTAAAACCAAGG+GGG | 0.748242 | 7_3:-65535931 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTAAAACAAATTGAATT+AGG | + | chr7_3:65532855-65532874 | Msa1117240:intron | 15.0% |
| !!! | TAGATGTTTTATATTTTTGT+TGG | + | chr7_3:65533068-65533087 | Msa1117240:intron | 15.0% |
| !!! | TAGATGTTTTATATTTTTGT+TGG | + | chr7_3:65533068-65533087 | Msa1117240:intron | 15.0% |
| !!! | AATAGTATTTTATTTTCACA+TGG | + | chr7_3:65533251-65533270 | Msa1117240:intron | 15.0% |
| !! | AAATTGTTTAATATACAATC+AGG | + | chr7_3:65533441-65533460 | Msa1117240:intron | 15.0% |
| !!! | GGCAATTTTATATTTTATTT+TGG | + | chr7_3:65534312-65534331 | Msa1117240:intron | 15.0% |
| !!! | TTATATTTTATTTTGGATTC+TGG | + | chr7_3:65534319-65534338 | Msa1117240:intron | 15.0% |
| !!! | TTGAATTTTACTGTATAAAT+AGG | + | chr7_3:65534976-65534995 | Msa1117240:intron | 15.0% |
| !!! | AGAATATCTTTAAGATAAAA+GGG | - | chr7_3:65535043-65535062 | None:intergenic | 15.0% |
| !!! | TAGAATATCTTTAAGATAAA+AGG | - | chr7_3:65535044-65535063 | None:intergenic | 15.0% |
| !! | TATCTTAAAGATATTCTATT+TGG | + | chr7_3:65535046-65535065 | Msa1117240:intron | 15.0% |
| !! | TTGTATTCTAACTAATAAAA+TGG | + | chr7_3:65535366-65535385 | Msa1117240:intron | 15.0% |
| !! | AAAATAAATTAACTATCTCT+TGG | - | chr7_3:65535811-65535830 | None:intergenic | 15.0% |
| !! | CTATATTATAAACTAATACT+AGG | - | chr7_3:65535957-65535976 | None:intergenic | 15.0% |
| !! | ATAATGATAAGGATTTGAAA+AGG | + | chr7_3:65532404-65532423 | Msa1117240:CDS | 20.0% |
| !! | TAATTGGATAGTTAATCTTA+GGG | + | chr7_3:65532793-65532812 | Msa1117240:intron | 20.0% |
| !!! | TTATATTTTAAGGAGAGTTT+TGG | + | chr7_3:65532961-65532980 | Msa1117240:intron | 20.0% |
| !!! | TTATATTTTTGTTGGAAATG+CGG | + | chr7_3:65533076-65533095 | Msa1117240:intron | 20.0% |
| !!! | TTATATTTTTGTTGGAAATG+CGG | + | chr7_3:65533076-65533095 | Msa1117240:intron | 20.0% |
| !! | TTATCCATGCAAAAATTAAA+CGG | + | chr7_3:65533881-65533900 | Msa1117240:intron | 20.0% |
| !!! | TTATGCAAATTATTAAGTTG+CGG | - | chr7_3:65534269-65534288 | None:intergenic | 20.0% |
| !! | GAAAATAACATGATATTTGA+TGG | + | chr7_3:65534291-65534310 | Msa1117240:intron | 20.0% |
| !!! | AAATTTTAGTGAATTTGATG+TGG | + | chr7_3:65534367-65534386 | Msa1117240:intron | 20.0% |
| !! | ATGAAAGATTTAGAGAAATA+AGG | + | chr7_3:65534456-65534475 | Msa1117240:intron | 20.0% |
| !! | AAATATGATTGAAGTTGTAA+AGG | + | chr7_3:65534512-65534531 | Msa1117240:intron | 20.0% |
| !! | CAAAGAATTCAATAATAACA+AGG | - | chr7_3:65534775-65534794 | None:intergenic | 20.0% |
| !!! | CTTGTTATTATTGAATTCTT+TGG | + | chr7_3:65534773-65534792 | Msa1117240:intron | 20.0% |
| !! | AAGATATTCTATTTGGATAT+CGG | + | chr7_3:65535053-65535072 | Msa1117240:intron | 20.0% |
| !!! | CATATGATAATGTCAATTAA+GGG | - | chr7_3:65535834-65535853 | None:intergenic | 20.0% |
| !!! | TCATATGATAATGTCAATTA+AGG | - | chr7_3:65535835-65535854 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTTTGTAGGAAAA+AGG | + | chr7_3:65532603-65532622 | Msa1117240:CDS | 25.0% |
| !!! | GTATTTGGTGTTAGTTTAAT+AGG | + | chr7_3:65532722-65532741 | Msa1117240:intron | 25.0% |
| ! | CTAATTGGATAGTTAATCTT+AGG | + | chr7_3:65532792-65532811 | Msa1117240:intron | 25.0% |
| ! | AAAACAAATTGAATTAGGAG+TGG | + | chr7_3:65532860-65532879 | Msa1117240:intron | 25.0% |
| !! | ATCTTCTGTCATTATGTTTT+CGG | + | chr7_3:65532893-65532912 | Msa1117240:intron | 25.0% |
| ! | TACAATATTCTTGTGTATCT+AGG | - | chr7_3:65532937-65532956 | None:intergenic | 25.0% |
| ! | AATTATGGTAGGATATGTTA+AGG | + | chr7_3:65532994-65533013 | Msa1117240:intron | 25.0% |
| !!! | TATATTTTTGTTGGAAATGC+GGG | + | chr7_3:65533077-65533096 | Msa1117240:intron | 25.0% |
| !!! | TATATTTTTGTTGGAAATGC+GGG | + | chr7_3:65533077-65533096 | Msa1117240:intron | 25.0% |
| ! | TTAATATACAATCAGGACTT+AGG | + | chr7_3:65533448-65533467 | Msa1117240:intron | 25.0% |
| ! | CAAATCATATGTTTCAAATG+TGG | - | chr7_3:65533492-65533511 | None:intergenic | 25.0% |
| !! | CACATTTGAAACATATGATT+TGG | + | chr7_3:65533490-65533509 | Msa1117240:intron | 25.0% |
| ! | AATACAAAGAACAACTAACA+AGG | - | chr7_3:65533598-65533617 | None:intergenic | 25.0% |
| ! | CTTTGTATTATATGTCTTAG+AGG | + | chr7_3:65533609-65533628 | Msa1117240:intron | 25.0% |
| ! | TTCTCTTATATTGTTTCATG+AGG | - | chr7_3:65533676-65533695 | None:intergenic | 25.0% |
| ! | AAATATCCAATCTATAGTGT+AGG | - | chr7_3:65533816-65533835 | None:intergenic | 25.0% |
| ! | ATCCACTTTATTCATGTAAA+CGG | + | chr7_3:65533991-65534010 | Msa1117240:intron | 25.0% |
| !!! | GTACTTTTTGTTTGAAAGAT+GGG | + | chr7_3:65534341-65534360 | Msa1117240:intron | 25.0% |
| ! | TCAATAATAACAAGGTAAGA+AGG | - | chr7_3:65534767-65534786 | None:intergenic | 25.0% |
| ! | TATTTGGATATCGGTAATAT+AGG | + | chr7_3:65535062-65535081 | Msa1117240:intron | 25.0% |
| ! | TCTAACTAATAAAATGGATG+TGG | + | chr7_3:65535372-65535391 | Msa1117240:intron | 25.0% |
| !! | TATTTGTGTAGATCTTTTCA+CGG | - | chr7_3:65535570-65535589 | None:intergenic | 25.0% |
| ! | GTTTATAATATAGTCAGTTC+AGG | + | chr7_3:65535964-65535983 | Msa1117240:three_prime_UTR | 25.0% |
| !! | GAAATTTTACTTGAGATATG+GGG | - | chr7_3:65536120-65536139 | None:intergenic | 25.0% |
| !! | GGAAATTTTACTTGAGATAT+GGG | - | chr7_3:65536121-65536140 | None:intergenic | 25.0% |
| !! | TGGAAATTTTACTTGAGATA+TGG | - | chr7_3:65536122-65536141 | None:intergenic | 25.0% |
| !! | GATTTGTTTCTGTTGGATTT+CGG | - | chr7_3:65531888-65531907 | None:intergenic | 30.0% |
| !!! | GTTTTTGGATTTGTTTCTGT+TGG | - | chr7_3:65531895-65531914 | None:intergenic | 30.0% |
| TAAGGATTTGAAAAGGATGA+AGG | + | chr7_3:65532411-65532430 | Msa1117240:CDS | 30.0% | |
| TTCCTACAAAACTTAAACAG+CGG | - | chr7_3:65532601-65532620 | None:intergenic | 30.0% | |
| !!! | AGGTGAGTTTTATTCTGTTT+AGG | + | chr7_3:65532623-65532642 | Msa1117240:intron | 30.0% |
| GAATGTGATTGGAAACTAAT+TGG | + | chr7_3:65532777-65532796 | Msa1117240:intron | 30.0% | |
| !!! | TTTTAAGGAGAGTTTTGGAA+AGG | + | chr7_3:65532966-65532985 | Msa1117240:intron | 30.0% |
| !! | ACTGTTTGAACATGTTTTGA+AGG | + | chr7_3:65533198-65533217 | Msa1117240:intron | 30.0% |
| !! | CTGTTTGAACATGTTTTGAA+GGG | + | chr7_3:65533199-65533218 | Msa1117240:intron | 30.0% |
| AAACAATTTGTAAGCATGTC+CGG | - | chr7_3:65533430-65533449 | None:intergenic | 30.0% | |
| ! | GAAACATATGATTTGGATGT+TGG | + | chr7_3:65533497-65533516 | Msa1117240:intron | 30.0% |
| GGGAGAGTTTCTTTAAATTT+AGG | - | chr7_3:65533702-65533721 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTACACTATAGAT+TGG | + | chr7_3:65533807-65533826 | Msa1117240:intron | 30.0% |
| GAGGTTTACATGGATAAAAT+TGG | - | chr7_3:65533947-65533966 | None:intergenic | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | - | chr7_3:65533990-65534009 | None:intergenic | 30.0% | |
| TGCTGTATAGACTACATTAT+TGG | - | chr7_3:65534034-65534053 | None:intergenic | 30.0% | |
| !! | TTGGTTCTAAAAATATCCAG+TGG | - | chr7_3:65534074-65534093 | None:intergenic | 30.0% |
| ATCAGAGTACAGTACAAAAT+TGG | - | chr7_3:65534093-65534112 | None:intergenic | 30.0% | |
| TTGTACTGTACTCTGATTTA+TGG | + | chr7_3:65534096-65534115 | Msa1117240:intron | 30.0% | |
| ! | ATTATTAAGTTGCGGTAACA+AGG | - | chr7_3:65534261-65534280 | None:intergenic | 30.0% |
| !! | GGTACTTTTTGTTTGAAAGA+TGG | + | chr7_3:65534340-65534359 | Msa1117240:intron | 30.0% |
| AGATTTAGAGAAATAAGGCT+TGG | + | chr7_3:65534461-65534480 | Msa1117240:intron | 30.0% | |
| ! | TTTGCTATAAATTCCGTAGT+TGG | + | chr7_3:65534539-65534558 | Msa1117240:intron | 30.0% |
| TACATTCATGATTCCAACTA+CGG | - | chr7_3:65534555-65534574 | None:intergenic | 30.0% | |
| ! | ATTTTACACACCAATTCACA+AGG | - | chr7_3:65534585-65534604 | None:intergenic | 30.0% |
| CTACATCTCACTTTAGATTT+GGG | - | chr7_3:65534635-65534654 | None:intergenic | 30.0% | |
| TCTACATCTCACTTTAGATT+TGG | - | chr7_3:65534636-65534655 | None:intergenic | 30.0% | |
| ATCAAGCAATTCAGTGATAT+GGG | + | chr7_3:65534705-65534724 | Msa1117240:intron | 30.0% | |
| TGTTTATATGCACGTATTGT+TGG | + | chr7_3:65534799-65534818 | Msa1117240:intron | 30.0% | |
| GTTTATATGCACGTATTGTT+GGG | + | chr7_3:65534800-65534819 | Msa1117240:intron | 30.0% | |
| ! | TCTGCATTTCACGTATATTT+TGG | + | chr7_3:65534851-65534870 | Msa1117240:intron | 30.0% |
| !! | ACGTATATTTTGGAGAATAC+AGG | + | chr7_3:65534861-65534880 | Msa1117240:intron | 30.0% |
| !! | AGGTTTTAATCTTGTTAGAG+TGG | + | chr7_3:65534881-65534900 | Msa1117240:intron | 30.0% |
| !!! | TTGTTCTTTTGTTTTGACTC+AGG | + | chr7_3:65534928-65534947 | Msa1117240:intron | 30.0% |
| !!! | TGTTTTGACTCAGGAAATTT+AGG | + | chr7_3:65534937-65534956 | Msa1117240:intron | 30.0% |
| GTATAAATAGGAACTCTTGA+AGG | + | chr7_3:65534988-65535007 | Msa1117240:intron | 30.0% | |
| !! | CACTAATTATCAATTTGCTG+CGG | - | chr7_3:65535091-65535110 | None:intergenic | 30.0% |
| ! | TTATTTGAGATCCTATGTCA+TGG | + | chr7_3:65535240-65535259 | Msa1117240:intron | 30.0% |
| ! | TATTTGAGATCCTATGTCAT+GGG | + | chr7_3:65535241-65535260 | Msa1117240:intron | 30.0% |
| ! | ATTTGTGTAGATCTTTTCAC+GGG | - | chr7_3:65535569-65535588 | None:intergenic | 30.0% |
| ! | TTAAACTCAACTGCTTTAGA+TGG | - | chr7_3:65535688-65535707 | None:intergenic | 30.0% |
| AGTTTAACAGTTTGGCAAAT+GGG | + | chr7_3:65535701-65535720 | Msa1117240:CDS | 30.0% | |
| GATACAAGACCTAAAAATGA+AGG | - | chr7_3:65536016-65536035 | None:intergenic | 30.0% | |
| TAGAACTGTAAAGAAGATTC+AGG | - | chr7_3:65536038-65536057 | None:intergenic | 30.0% | |
| !! | GGAAAAGGTTTTTGAGGATT+TGG | - | chr7_3:65531731-65531750 | None:intergenic | 35.0% |
| GGTTTATTCAGTGTTCTGAT+CGG | - | chr7_3:65531752-65531771 | None:intergenic | 35.0% | |
| !!! | TGAGTTGCGTTTTTTGGATT+TGG | - | chr7_3:65531948-65531967 | None:intergenic | 35.0% |
| AAACAACCTGTGACGTTATT+CGG | + | chr7_3:65532130-65532149 | Msa1117240:CDS | 35.0% | |
| CTTAAATACGTTCTCAAAGC+TGG | + | chr7_3:65532181-65532200 | Msa1117240:CDS | 35.0% | |
| TGAAGTGGATAGTGATATGA+CGG | + | chr7_3:65532210-65532229 | Msa1117240:CDS | 35.0% | |
| TGATTTCTTGCGTGATATTG+CGG | + | chr7_3:65532246-65532265 | Msa1117240:CDS | 35.0% | |
| GATGATGATTTGAGTGATTG+TGG | + | chr7_3:65532364-65532383 | Msa1117240:CDS | 35.0% | |
| ! | TAGTGGTGGTGATAATGATA+AGG | + | chr7_3:65532393-65532412 | Msa1117240:CDS | 35.0% |
| ! | GTGTGATGAGGATAAGATTT+TGG | + | chr7_3:65532450-65532469 | Msa1117240:CDS | 35.0% |
| TTAAGAAGCTGTTGAATGAG+TGG | + | chr7_3:65532479-65532498 | Msa1117240:CDS | 35.0% | |
| TCCTACAAAACTTAAACAGC+GGG | - | chr7_3:65532600-65532619 | None:intergenic | 35.0% | |
| !! | CATTTAGCAAACCACTTTTC+TGG | + | chr7_3:65532700-65532719 | Msa1117240:intron | 35.0% |
| !! | CAAACCACTTTTCTGGTATT+TGG | + | chr7_3:65532707-65532726 | Msa1117240:intron | 35.0% |
| AACACCAAATACCAGAAAAG+TGG | - | chr7_3:65532714-65532733 | None:intergenic | 35.0% | |
| TAGGAAAACTTACATGCTAG+TGG | + | chr7_3:65532741-65532760 | Msa1117240:intron | 35.0% | |
| TTGTTAACTGTTTGCCGAAA+TGG | + | chr7_3:65532821-65532840 | Msa1117240:intron | 35.0% | |
| TGTTAACTGTTTGCCGAAAT+GGG | + | chr7_3:65532822-65532841 | Msa1117240:intron | 35.0% | |
| ACTTCACTATGTTCCCATTT+CGG | - | chr7_3:65532838-65532857 | None:intergenic | 35.0% | |
| ACAAATTGAATTAGGAGTGG+TGG | + | chr7_3:65532863-65532882 | Msa1117240:intron | 35.0% | |
| CAAATTGAATTAGGAGTGGT+GGG | + | chr7_3:65532864-65532883 | Msa1117240:intron | 35.0% | |
| ! | TTCTGTCATTATGTTTTCGG+AGG | + | chr7_3:65532896-65532915 | Msa1117240:intron | 35.0% |
| ! | TTTTCGGAGGACTTTTTGTA+TGG | + | chr7_3:65532909-65532928 | Msa1117240:intron | 35.0% |
| TTTGGAAAGGTGGTGAATTA+TGG | + | chr7_3:65532979-65532998 | Msa1117240:intron | 35.0% | |
| ! | TATTTTCACATGGAGAGTGA+AGG | + | chr7_3:65533261-65533280 | Msa1117240:intron | 35.0% |
| ! | TTTTACCTTGCATTTGTGAG+AGG | + | chr7_3:65533320-65533339 | Msa1117240:intron | 35.0% |
| GTTGAAGAAACAATTGGAGT+TGG | - | chr7_3:65533389-65533408 | None:intergenic | 35.0% | |
| ATATACAATCAGGACTTAGG+AGG | + | chr7_3:65533451-65533470 | Msa1117240:intron | 35.0% | |
| !! | GAGGTATTTATCCTTTTGCA+CGG | - | chr7_3:65533657-65533676 | None:intergenic | 35.0% |
| !! | AAGGTGGATGAGGTTTTAAT+GGG | - | chr7_3:65533722-65533741 | None:intergenic | 35.0% |
| !! | TAAGGTGGATGAGGTTTTAA+TGG | - | chr7_3:65533723-65533742 | None:intergenic | 35.0% |
| ATCCACCTTATCCTTGTAAA+CGG | + | chr7_3:65533733-65533752 | Msa1117240:intron | 35.0% | |
| ATCAGAGTACAGTACAACAT+TGG | - | chr7_3:65533845-65533864 | None:intergenic | 35.0% | |
| TTGTACTGTACTCTGATTCA+TGG | + | chr7_3:65533848-65533867 | Msa1117240:intron | 35.0% | |
| !! | AGCACCGTTTAATTTTTGCA+TGG | - | chr7_3:65533888-65533907 | None:intergenic | 35.0% |
| TAAAGTGGATGAGGTTTACA+TGG | - | chr7_3:65533957-65533976 | None:intergenic | 35.0% | |
| TTGCATGAATAAAGTGGATG+AGG | - | chr7_3:65533966-65533985 | None:intergenic | 35.0% | |
| TGAGGTTTGCATGAATAAAG+TGG | - | chr7_3:65533972-65533991 | None:intergenic | 35.0% | |
| CACCGTTTACATGAATAAAG+TGG | - | chr7_3:65533996-65534015 | None:intergenic | 35.0% | |
| ! | TCTAAAGTGAGATGTAGAAC+TGG | + | chr7_3:65534638-65534657 | Msa1117240:intron | 35.0% |
| CTAAAGTGAGATGTAGAACT+GGG | + | chr7_3:65534639-65534658 | Msa1117240:intron | 35.0% | |
| GATCAAGCAATTCAGTGATA+TGG | + | chr7_3:65534704-65534723 | Msa1117240:intron | 35.0% | |
| AGTCTTTAAACACTCCAAGA+GGG | - | chr7_3:65534907-65534926 | None:intergenic | 35.0% | |
| TAGTCTTTAAACACTCCAAG+AGG | - | chr7_3:65534908-65534927 | None:intergenic | 35.0% | |
| ! | GAACTCTTGAAGGATTTTAC+TGG | + | chr7_3:65534998-65535017 | Msa1117240:intron | 35.0% |
| ! | TTGAAGGATTTTACTGGACT+TGG | + | chr7_3:65535004-65535023 | Msa1117240:intron | 35.0% |
| ! | TGAAGGATTTTACTGGACTT+GGG | + | chr7_3:65535005-65535024 | Msa1117240:intron | 35.0% |
| GTGAGTAGTTGTACTTTGTT+TGG | + | chr7_3:65535108-65535127 | Msa1117240:intron | 35.0% | |
| CAACGCAATACTAAGACAAA+TGG | - | chr7_3:65535173-65535192 | None:intergenic | 35.0% | |
| GATCTCAAATAACCAGCTAA+GGG | - | chr7_3:65535232-65535251 | None:intergenic | 35.0% | |
| AGTACTTACAATCAGTGAAG+AGG | + | chr7_3:65535626-65535645 | Msa1117240:CDS | 35.0% | |
| ! | GGTTAATGACATTTTGCCAA+CGG | + | chr7_3:65535647-65535666 | Msa1117240:CDS | 35.0% |
| AGCAGTTGAGTTTAACAGTT+TGG | + | chr7_3:65535693-65535712 | Msa1117240:CDS | 35.0% | |
| GAGTTTAACAGTTTGGCAAA+TGG | + | chr7_3:65535700-65535719 | Msa1117240:CDS | 35.0% | |
| TTAGCAGAAGAGAGATTTAG+TGG | + | chr7_3:65535742-65535761 | Msa1117240:CDS | 35.0% | |
| TAGCAGAAGAGAGATTTAGT+GGG | + | chr7_3:65535743-65535762 | Msa1117240:CDS | 35.0% | |
| AATTAACTATCTCTTGGAGC+AGG | - | chr7_3:65535805-65535824 | None:intergenic | 35.0% | |
| ATTTCTCCTCATACATTGCA+CGG | - | chr7_3:65535883-65535902 | None:intergenic | 35.0% | |
| AGAGAAACTTAAAACCAAGG+GGG | - | chr7_3:65535934-65535953 | None:intergenic | 35.0% | |
| GAGAGAAACTTAAAACCAAG+GGG | - | chr7_3:65535935-65535954 | None:intergenic | 35.0% | |
| GGAGAGAAACTTAAAACCAA+GGG | - | chr7_3:65535936-65535955 | None:intergenic | 35.0% | |
| AGGAGAGAAACTTAAAACCA+AGG | - | chr7_3:65535937-65535956 | None:intergenic | 35.0% | |
| !! | CTACAATGGCCTTCATTTTT+AGG | + | chr7_3:65536004-65536023 | Msa1117240:three_prime_UTR | 35.0% |
| ! | CTGATCGGAAAAGGTTTTTG+AGG | - | chr7_3:65531737-65531756 | None:intergenic | 40.0% |
| TTCAGTGTTCTGATCGGAAA+AGG | - | chr7_3:65531746-65531765 | None:intergenic | 40.0% | |
| !! | TGCTTTAGAAGGTCCATCTA+GGG | - | chr7_3:65531800-65531819 | None:intergenic | 40.0% |
| !! | TTGCTTTAGAAGGTCCATCT+AGG | - | chr7_3:65531801-65531820 | None:intergenic | 40.0% |
| ! | TGAGAAGCTCTTGCTTTAGA+AGG | - | chr7_3:65531811-65531830 | None:intergenic | 40.0% |
| TTTGAAGAATTTCTTGCCGC+CGG | - | chr7_3:65531861-65531880 | None:intergenic | 40.0% | |
| ! | TTTCTTCTTCGCGGAGTTTT+TGG | - | chr7_3:65531910-65531929 | None:intergenic | 40.0% |
| !! | GTTGGTTGATGAGGTTGTTA+CGG | - | chr7_3:65531993-65532012 | None:intergenic | 40.0% |
| !! | TGTCTATGTTTTGTTCGTCG+GGG | - | chr7_3:65532063-65532082 | None:intergenic | 40.0% |
| !! | CTGTCTATGTTTTGTTCGTC+GGG | - | chr7_3:65532064-65532083 | None:intergenic | 40.0% |
| !! | GCTGTCTATGTTTTGTTCGT+CGG | - | chr7_3:65532065-65532084 | None:intergenic | 40.0% |
| ! | GGATGACTTCTTGTTTAGGA+AGG | - | chr7_3:65532093-65532112 | None:intergenic | 40.0% |
| TCACAGGTTGTTTGAGAAAC+CGG | - | chr7_3:65532123-65532142 | None:intergenic | 40.0% | |
| CAAAGCTGGATTGTTTGAAG+TGG | + | chr7_3:65532195-65532214 | Msa1117240:CDS | 40.0% | |
| !! | GGATTTTGAGTGATAGGAAG+CGG | + | chr7_3:65532293-65532312 | Msa1117240:CDS | 40.0% |
| GATGATTTGAGTGATTGTGG+TGG | + | chr7_3:65532367-65532386 | Msa1117240:CDS | 40.0% | |
| !! | ACCCGCTGTTTAAGTTTTGT+AGG | + | chr7_3:65532596-65532615 | Msa1117240:CDS | 40.0% |
| TACATGCTAGTGGAATGCAT+CGG | + | chr7_3:65532751-65532770 | Msa1117240:intron | 40.0% | |
| !! | TGCATCGGTTAGAATGTGAT+TGG | + | chr7_3:65532766-65532785 | Msa1117240:intron | 40.0% |
| !!! | TAAGGAGAGTTTTGGAAAGG+TGG | + | chr7_3:65532969-65532988 | Msa1117240:intron | 40.0% |
| GAAAGGTGGTGAATTATGGT+AGG | + | chr7_3:65532983-65533002 | Msa1117240:intron | 40.0% | |
| ATCAACCTCTCACAAATGCA+AGG | - | chr7_3:65533328-65533347 | None:intergenic | 40.0% | |
| GATTCCACAACTCAAACTTG+TGG | + | chr7_3:65533345-65533364 | Msa1117240:intron | 40.0% | |
| ! | TCCAATTGTTTCTTCAACGC+TGG | + | chr7_3:65533391-65533410 | Msa1117240:intron | 40.0% |
| ! | TCCAGCGTTGAAGAAACAAT+TGG | - | chr7_3:65533395-65533414 | None:intergenic | 40.0% |
| !! | TTTTATCCCCTCTGCTTTTG+TGG | + | chr7_3:65533522-65533541 | Msa1117240:intron | 40.0% |
| AATCACACCACAAAAGCAGA+GGG | - | chr7_3:65533532-65533551 | None:intergenic | 40.0% | |
| TCATAGTCGTTCCTTTCTAG+TGG | + | chr7_3:65533562-65533581 | Msa1117240:intron | 40.0% | |
| TTACAAGGATAAGGTGGATG+AGG | - | chr7_3:65533732-65533751 | None:intergenic | 40.0% | |
| TCAAACTGGTAGCACCAATA+AGG | + | chr7_3:65533759-65533778 | Msa1117240:intron | 40.0% | |
| TGCTGTGCAGACTACATTAT+TGG | - | chr7_3:65533924-65533943 | None:intergenic | 40.0% | |
| ! | AAACTAGAGACGTTTTCCAC+TGG | + | chr7_3:65534055-65534074 | Msa1117240:intron | 40.0% |
| CTGCACTTGAATCTCAATCA+AGG | - | chr7_3:65534164-65534183 | None:intergenic | 40.0% | |
| !! | AATGCTTAGCTTTGTAGCAG+TGG | + | chr7_3:65534209-65534228 | Msa1117240:intron | 40.0% |
| !! | ATGCTTAGCTTTGTAGCAGT+GGG | + | chr7_3:65534210-65534229 | Msa1117240:intron | 40.0% |
| ! | GTATTCTCAGCCTTGTGAAT+TGG | + | chr7_3:65534572-65534591 | Msa1117240:intron | 40.0% |
| AAGAACCTATTACACAAGCC+CGG | - | chr7_3:65535150-65535169 | None:intergenic | 40.0% | |
| GGATCTCAAATAACCAGCTA+AGG | - | chr7_3:65535233-65535252 | None:intergenic | 40.0% | |
| GATATGAAATGTGTCAGTGC+TGG | + | chr7_3:65535326-65535345 | Msa1117240:intron | 40.0% | |
| AGGTTCTTCAGGATGACATT+CGG | + | chr7_3:65535407-65535426 | Msa1117240:intron | 40.0% | |
| CTGCAATGGACCATTATATC+AGG | + | chr7_3:65535479-65535498 | Msa1117240:CDS | 40.0% | |
| AATGGACCATTATATCAGGC+TGG | + | chr7_3:65535483-65535502 | Msa1117240:CDS | 40.0% | |
| ! | CATTATATCAGGCTGGCTAT+CGG | + | chr7_3:65535490-65535509 | Msa1117240:CDS | 40.0% |
| ! | ATTATATCAGGCTGGCTATC+GGG | + | chr7_3:65535491-65535510 | Msa1117240:CDS | 40.0% |
| AGCAGAAGAGAGATTTAGTG+GGG | + | chr7_3:65535744-65535763 | Msa1117240:CDS | 40.0% | |
| ATTGCACGGATTCTCAATAC+TGG | - | chr7_3:65535869-65535888 | None:intergenic | 40.0% | |
| GAGAAACTTAAAACCAAGGG+GGG | - | chr7_3:65535933-65535952 | None:intergenic | 40.0% | |
| TGTTTCGGTAAGCACTACAA+TGG | + | chr7_3:65535990-65536009 | Msa1117240:three_prime_UTR | 40.0% | |
| TGTTCAATTTCCACCCCATT+TGG | + | chr7_3:65536086-65536105 | Msa1117240:three_prime_UTR | 40.0% | |
| ATGGGGTAACAAGACCAAAT+GGG | - | chr7_3:65536103-65536122 | None:intergenic | 40.0% | |
| TATGGGGTAACAAGACCAAA+TGG | - | chr7_3:65536104-65536123 | None:intergenic | 40.0% | |
| ! | AGAAGGTCCATCTAGGGTTT+CGG | - | chr7_3:65531794-65531813 | None:intergenic | 45.0% |
| ! | GTTCGCGTTTTTCTTCTTCG+CGG | - | chr7_3:65531919-65531938 | None:intergenic | 45.0% |
| !!! | GGTGGTTGAGTTGCGTTTTT+TGG | - | chr7_3:65531954-65531973 | None:intergenic | 45.0% |
| !! | TATGTTTTGTTCGTCGGGGA+GGG | - | chr7_3:65532059-65532078 | None:intergenic | 45.0% |
| ! | CTTCTTGTTTAGGAAGGACG+AGG | - | chr7_3:65532087-65532106 | None:intergenic | 45.0% |
| GTTGTTTGAGAAACCGGAGA+CGG | - | chr7_3:65532117-65532136 | None:intergenic | 45.0% | |
| ACGATGATGCGAGATTCGAT+CGG | + | chr7_3:65532158-65532177 | Msa1117240:CDS | 45.0% | |
| ! | GTGGATAGTGATATGACGGA+AGG | + | chr7_3:65532214-65532233 | Msa1117240:CDS | 45.0% |
| ATATTGCGGAGTTGAGGAAG+AGG | + | chr7_3:65532260-65532279 | Msa1117240:CDS | 45.0% | |
| !! | AGACGGGGATTTTGAGTGAT+AGG | + | chr7_3:65532287-65532306 | Msa1117240:CDS | 45.0% |
| !! | AGTGATTGTGGTGGATCTAG+TGG | + | chr7_3:65532376-65532395 | Msa1117240:CDS | 45.0% |
| TTTCGATGAGCTGTGTGATG+AGG | + | chr7_3:65532438-65532457 | Msa1117240:CDS | 45.0% | |
| GCTGTTGAATGAGTGGAAAC+AGG | + | chr7_3:65532486-65532505 | Msa1117240:CDS | 45.0% | |
| TCACATGGAGAGTGAAGGAA+AGG | + | chr7_3:65533266-65533285 | Msa1117240:intron | 45.0% | |
| !! | AAGGCCACAAGTTTGAGTTG+TGG | - | chr7_3:65533352-65533371 | None:intergenic | 45.0% |
| !!! | GTTGGTTTTGTGCGACTAGA+AGG | - | chr7_3:65533371-65533390 | None:intergenic | 45.0% |
| ! | AATCAGGACTTAGGAGGCAT+TGG | + | chr7_3:65533457-65533476 | Msa1117240:intron | 45.0% |
| ATCACACCACAAAAGCAGAG+GGG | - | chr7_3:65533531-65533550 | None:intergenic | 45.0% | |
| GAATCACACCACAAAAGCAG+AGG | - | chr7_3:65533533-65533552 | None:intergenic | 45.0% | |
| ! | TAGTCGTTCCTTTCTAGTGG+AGG | + | chr7_3:65533565-65533584 | Msa1117240:intron | 45.0% |
| GCTCAAATCCTCCACTAGAA+AGG | - | chr7_3:65533576-65533595 | None:intergenic | 45.0% | |
| ! | TTTTGCACGGCAGAACTTCT+TGG | - | chr7_3:65533644-65533663 | None:intergenic | 45.0% |
| AAGAAGTTCTGCCGTGCAAA+AGG | + | chr7_3:65533643-65533662 | Msa1117240:intron | 45.0% | |
| CACCGTTTACAAGGATAAGG+TGG | - | chr7_3:65533738-65533757 | None:intergenic | 45.0% | |
| ! | GAGCACCGTTTACAAGGATA+AGG | - | chr7_3:65533741-65533760 | None:intergenic | 45.0% |
| ! | CAGTTTGAGCACCGTTTACA+AGG | - | chr7_3:65533747-65533766 | None:intergenic | 45.0% |
| CTTGTAAACGGTGCTCAAAC+TGG | + | chr7_3:65533745-65533764 | Msa1117240:intron | 45.0% | |
| TGCTGTGCAGACTACCTTAT+TGG | - | chr7_3:65533776-65533795 | None:intergenic | 45.0% | |
| !! | TGCTTAGCTTTGTAGCAGTG+GGG | + | chr7_3:65534211-65534230 | Msa1117240:intron | 45.0% |
| TGGATGACTCAGTCTATGAC+CGG | + | chr7_3:65535128-65535147 | Msa1117240:intron | 45.0% | |
| TATGACCGGGCTTGTGTAAT+AGG | + | chr7_3:65535142-65535161 | Msa1117240:intron | 45.0% | |
| CTCAAATAACCAGCTAAGGG+AGG | - | chr7_3:65535229-65535248 | None:intergenic | 45.0% | |
| ATGTCTGACACCCATGACAT+AGG | - | chr7_3:65535254-65535273 | None:intergenic | 45.0% | |
| ! | GCATGTACTTCAGGTTCTTC+AGG | + | chr7_3:65535396-65535415 | Msa1117240:intron | 45.0% |
| TGATGGTTGACTGCTGTATG+AGG | + | chr7_3:65535443-65535462 | Msa1117240:CDS | 45.0% | |
| CTGTATGAGGCGAGATTATC+TGG | + | chr7_3:65535456-65535475 | Msa1117240:CDS | 45.0% | |
| CGATAGCCAGCCTGATATAA+TGG | - | chr7_3:65535492-65535511 | None:intergenic | 45.0% | |
| ATAGTAACACCGATAGGCCA+GGG | - | chr7_3:65535523-65535542 | None:intergenic | 45.0% | |
| CCAACCATAGTAACACCGAT+AGG | - | chr7_3:65535529-65535548 | None:intergenic | 45.0% | |
| !! | CCTATCGGTGTTACTATGGT+TGG | + | chr7_3:65535526-65535545 | Msa1117240:CDS | 45.0% |
| ! | ACTGCTTTAGATGGCAGTGT+CGG | - | chr7_3:65535679-65535698 | None:intergenic | 45.0% |
| GCAGAAGAGAGATTTAGTGG+GGG | + | chr7_3:65535745-65535764 | Msa1117240:CDS | 45.0% | |
| GAGAATCCGTGCAATGTATG+AGG | + | chr7_3:65535874-65535893 | Msa1117240:three_prime_UTR | 45.0% | |
| TGGGGTAACAAGACCAAATG+GGG | - | chr7_3:65536102-65536121 | None:intergenic | 45.0% | |
| !!! | ATTGTATATTTTATATTTTA+AGG | + | chr7_3:65532951-65532970 | Msa1117240:intron | 5.0% |
| CAATCCCTAGCCGAAGAAAC+CGG | + | chr7_3:65531839-65531858 | Msa1117240:CDS | 50.0% | |
| !! | TTTCTTGCCGCCGGTTTCTT+CGG | - | chr7_3:65531852-65531871 | None:intergenic | 50.0% |
| TGAGGTTGTTACGGTGGAGA+CGG | - | chr7_3:65531984-65532003 | None:intergenic | 50.0% | |
| !! | GGTTGATGAGGTTGTTACGG+TGG | - | chr7_3:65531990-65532009 | None:intergenic | 50.0% |
| !! | CTATGTTTTGTTCGTCGGGG+AGG | - | chr7_3:65532060-65532079 | None:intergenic | 50.0% |
| ! | CGGCGGATGACTTCTTGTTT+AGG | - | chr7_3:65532097-65532116 | None:intergenic | 50.0% |
| TCTTCGCCGAATAACGTCAC+AGG | - | chr7_3:65532139-65532158 | None:intergenic | 50.0% | |
| TGCGTGATATTGCGGAGTTG+AGG | + | chr7_3:65532254-65532273 | Msa1117240:CDS | 50.0% | |
| GTTGAGGAAGAGGCAGAAGA+CGG | + | chr7_3:65532270-65532289 | Msa1117240:CDS | 50.0% | |
| TTGAGGAAGAGGCAGAAGAC+GGG | + | chr7_3:65532271-65532290 | Msa1117240:CDS | 50.0% | |
| !! | GATTGTGGTGGATCTAGTGG+TGG | + | chr7_3:65532379-65532398 | Msa1117240:CDS | 50.0% |
| GAAACAGGAGTTGCGTGAGA+TGG | + | chr7_3:65532501-65532520 | Msa1117240:CDS | 50.0% | |
| GACGGCTAAAGGGAAGTCTA+TGG | + | chr7_3:65532540-65532559 | Msa1117240:CDS | 50.0% | |
| GAGATGTAGAACTGGGCAAC+TGG | + | chr7_3:65534646-65534665 | Msa1117240:intron | 50.0% | |
| TGGGCAACTGGCGAACATTT+GGG | + | chr7_3:65534658-65534677 | Msa1117240:intron | 50.0% | |
| TCTTGTTAGAGTGGCCCTCT+TGG | + | chr7_3:65534890-65534909 | Msa1117240:intron | 50.0% | |
| GGATGACTCAGTCTATGACC+GGG | + | chr7_3:65535129-65535148 | Msa1117240:intron | 50.0% | |
| GCATTCTAACCTCCCTTAGC+TGG | + | chr7_3:65535217-65535236 | Msa1117240:intron | 50.0% | |
| GGATGTGGTGCATGTACTTC+AGG | + | chr7_3:65535387-65535406 | Msa1117240:intron | 50.0% | |
| TCTTCAGGATGACATTCGGC+AGG | + | chr7_3:65535411-65535430 | Msa1117240:CDS | 50.0% | |
| TCGGCAGGCACTAATGTTGA+TGG | + | chr7_3:65535426-65535445 | Msa1117240:CDS | 50.0% | |
| GCGAGATTATCTGGCTGCAA+TGG | + | chr7_3:65535465-65535484 | Msa1117240:CDS | 50.0% | |
| CATAGTAACACCGATAGGCC+AGG | - | chr7_3:65535524-65535543 | None:intergenic | 50.0% | |
| !! | CTGGCCTATCGGTGTTACTA+TGG | + | chr7_3:65535522-65535541 | Msa1117240:CDS | 50.0% |
| ! | CTGCTTTAGATGGCAGTGTC+GGG | - | chr7_3:65535678-65535697 | None:intergenic | 50.0% |
| ! | AGTCAGTTCAGGCGCTGTTT+CGG | + | chr7_3:65535975-65535994 | Msa1117240:three_prime_UTR | 50.0% |
| GGTAACAAGACCAAATGGGG+TGG | - | chr7_3:65536099-65536118 | None:intergenic | 50.0% | |
| ! | CCATCTAGGGTTTCGGACGA+CGG | - | chr7_3:65531787-65531806 | None:intergenic | 55.0% |
| CGGTTTCTTCGGCTAGGGAT+TGG | - | chr7_3:65531841-65531860 | None:intergenic | 55.0% | |
| TGTTACGGTGGAGACGGTGT+CGG | - | chr7_3:65531978-65531997 | None:intergenic | 55.0% | |
| !! | GGAGGAAGCGTTGGTTGATG+AGG | - | chr7_3:65532002-65532021 | None:intergenic | 55.0% |
| AAGAAGTCATCCGCCGTCTC+CGG | + | chr7_3:65532101-65532120 | Msa1117240:CDS | 55.0% | |
| GTTTGAGAAACCGGAGACGG+CGG | - | chr7_3:65532114-65532133 | None:intergenic | 55.0% | |
| TGAGGAAGAGGCAGAAGACG+GGG | + | chr7_3:65532272-65532291 | Msa1117240:CDS | 55.0% | |
| GAGTGATAGGAAGCGGCAGA+AGG | + | chr7_3:65532300-65532319 | Msa1117240:CDS | 55.0% | |
| TGATAGGAAGCGGCAGAAGG+CGG | + | chr7_3:65532303-65532322 | Msa1117240:CDS | 55.0% | |
| ACAGGAGTTGCGTGAGATGG+CGG | + | chr7_3:65532504-65532523 | Msa1117240:CDS | 55.0% | |
| GTATCGCGCACACTGCTTGA+AGG | - | chr7_3:65532572-65532591 | None:intergenic | 55.0% | |
| CTGGGCAACTGGCGAACATT+TGG | + | chr7_3:65534657-65534676 | Msa1117240:intron | 55.0% | |
| GGGCAACTGGCGAACATTTG+GGG | + | chr7_3:65534659-65534678 | Msa1117240:intron | 55.0% | |
| GGCAACTGGCGAACATTTGG+GGG | + | chr7_3:65534660-65534679 | Msa1117240:intron | 55.0% | |
| GCAATCAGTCGTCTGAGGAG+AGG | + | chr7_3:65535767-65535786 | Msa1117240:CDS | 55.0% | |
| AGTCGTCTGAGGAGAGGCTT+AGG | + | chr7_3:65535773-65535792 | Msa1117240:CDS | 55.0% | |
| ! | TAAAACCAAGGGGGGCGCAA+GGG | - | chr7_3:65535925-65535944 | None:intergenic | 55.0% |
| ! | TTAAAACCAAGGGGGGCGCA+AGG | - | chr7_3:65535926-65535945 | None:intergenic | 55.0% |
| TAGGGTTTCGGACGACGGTG+CGG | - | chr7_3:65531782-65531801 | None:intergenic | 60.0% | |
| CCGTCGTCCGAAACCCTAGA+TGG | + | chr7_3:65531784-65531803 | Msa1117240:exon | 60.0% | |
| TCCCTAGCCGAAGAAACCGG+CGG | + | chr7_3:65531842-65531861 | Msa1117240:CDS | 60.0% | |
| !! | GGAAGCGCTGGATGAAGCAG+CGG | - | chr7_3:65532038-65532057 | None:intergenic | 60.0% |
| !! | GAGGATGGTGCTGCTGAGGA+TGG | + | chr7_3:65532325-65532344 | Msa1117240:CDS | 60.0% |
| !! | GGTGCTGCTGAGGATGGTGA+TGG | + | chr7_3:65532331-65532350 | Msa1117240:CDS | 60.0% |
| !! | GCTGCTGAGGATGGTGATGG+TGG | + | chr7_3:65532334-65532353 | Msa1117240:CDS | 60.0% |
| !! | GAGGATGGTGATGGTGGTGC+TGG | + | chr7_3:65532340-65532359 | Msa1117240:CDS | 60.0% |
| !! | GTTGCGTGAGATGGCGGAGA+CGG | + | chr7_3:65532510-65532529 | Msa1117240:CDS | 60.0% |
| !! | AGATGGCGGAGACGGAGAAG+CGG | + | chr7_3:65532518-65532537 | Msa1117240:CDS | 60.0% |
| ACGGAGAAGCGGACGGCTAA+AGG | + | chr7_3:65532529-65532548 | Msa1117240:CDS | 60.0% | |
| CGGAGAAGCGGACGGCTAAA+GGG | + | chr7_3:65532530-65532549 | Msa1117240:CDS | 60.0% | |
| CGCTGGAGAGAACTGCAGAC+CGG | + | chr7_3:65533408-65533427 | Msa1117240:intron | 60.0% | |
| ACTGGCGAACATTTGGGGGC+AGG | + | chr7_3:65534664-65534683 | Msa1117240:intron | 60.0% | |
| CTGGCGAACATTTGGGGGCA+GGG | + | chr7_3:65534665-65534684 | Msa1117240:intron | 60.0% | |
| TGGCGAACATTTGGGGGCAG+GGG | + | chr7_3:65534666-65534685 | Msa1117240:intron | 60.0% | |
| TGGCTATCGGGAATGCTCCC+TGG | + | chr7_3:65535503-65535522 | Msa1117240:CDS | 60.0% | |
| GGGAATGCTCCCTGGCCTAT+CGG | + | chr7_3:65535511-65535530 | Msa1117240:CDS | 60.0% | |
| TGGGGGCAATCAGTCGTCTG+AGG | + | chr7_3:65535762-65535781 | Msa1117240:CDS | 60.0% | |
| !! | GCCGCCGGTTTCTTCGGCTA+GGG | - | chr7_3:65531846-65531865 | None:intergenic | 65.0% |
| !! | TGCCGCCGGTTTCTTCGGCT+AGG | - | chr7_3:65531847-65531866 | None:intergenic | 65.0% |
| ! | TACGGTGGAGACGGTGTCGG+AGG | - | chr7_3:65531975-65531994 | None:intergenic | 65.0% |
| !! | GGTGACGGAGGAGGAAGCGT+TGG | - | chr7_3:65532011-65532030 | None:intergenic | 65.0% |
| ! | AGCGCTGGATGAAGCAGCGG+CGG | - | chr7_3:65532035-65532054 | None:intergenic | 65.0% |
| TAGGAAGCGGCAGAAGGCGG+AGG | + | chr7_3:65532306-65532325 | Msa1117240:CDS | 65.0% | |
| AAGCGGCAGAAGGCGGAGGA+TGG | + | chr7_3:65532310-65532329 | Msa1117240:CDS | 65.0% | |
| ! | GCAGTGTCGGGTAACGCCGT+TGG | - | chr7_3:65535666-65535685 | None:intergenic | 65.0% |
| TTCGGACGACGGTGCGGTGG+TGG | - | chr7_3:65531776-65531795 | None:intergenic | 70.0% | |
| GGTTTCGGACGACGGTGCGG+TGG | - | chr7_3:65531779-65531798 | None:intergenic | 70.0% | |
| ! | GGTGGAGACGGTGTCGGAGG+TGG | - | chr7_3:65531972-65531991 | None:intergenic | 70.0% |
| TGAAGCAGCGGCGGCGGTGA+CGG | - | chr7_3:65532026-65532045 | None:intergenic | 70.0% | |
| GCTGGATGAAGCAGCGGCGG+CGG | - | chr7_3:65532032-65532051 | None:intergenic | 70.0% | |
| ! | TTCGTCGGGGAGGGAAGCGC+TGG | - | chr7_3:65532050-65532069 | None:intergenic | 70.0% |
| !! | GGCGGAGGATGGTGCTGCTG+AGG | + | chr7_3:65532321-65532340 | Msa1117240:CDS | 70.0% |
| GGCGGAGACGGAGAAGCGGA+CGG | + | chr7_3:65532522-65532541 | Msa1117240:CDS | 70.0% | |
| ! | GGACGACGGTGCGGTGGTGG+TGG | - | chr7_3:65531773-65531792 | None:intergenic | 75.0% |
| TGCAGCCCTTGCGCCCCCCT+TGG | + | chr7_3:65535917-65535936 | Msa1117240:three_prime_UTR | 75.0% | |
| !!! | AGCGGCGGCGGTGACGGAGG+AGG | - | chr7_3:65532020-65532039 | None:intergenic | 80.0% |
| !! | AGCAGCGGCGGCGGTGACGG+AGG | - | chr7_3:65532023-65532042 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 65531696 | 65536155 | 65531696 | ID=Msa1117240;Name=Msa1117240 |
| chr7_3 | mRNA | 65531696 | 65536155 | 65531696 | ID=Msa1117240-mRNA-1;Parent=Msa1117240;Name=Msa1117240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=107|1|1|1|1|1|2|333|411 |
| chr7_3 | exon | 65531696 | 65532624 | 65531696 | ID=Msa1117240-mRNA-1:exon:15619;Parent=Msa1117240-mRNA-1 |
| chr7_3 | exon | 65535409 | 65536155 | 65535409 | ID=Msa1117240-mRNA-1:exon:15620;Parent=Msa1117240-mRNA-1 |
| chr7_3 | five_prime_UTR | 65531696 | 65531802 | 65531696 | ID=Msa1117240-mRNA-1:five_prime_utr;Parent=Msa1117240-mRNA-1 |
| chr7_3 | CDS | 65531803 | 65532624 | 65531803 | ID=Msa1117240-mRNA-1:cds;Parent=Msa1117240-mRNA-1 |
| chr7_3 | CDS | 65535409 | 65535822 | 65535409 | ID=Msa1117240-mRNA-1:cds;Parent=Msa1117240-mRNA-1 |
| chr7_3 | three_prime_UTR | 65535823 | 65536155 | 65535823 | ID=Msa1117240-mRNA-1:three_prime_utr;Parent=Msa1117240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
