Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341060 | QHO29086.1 | 97.605 | 167 | 4 | 0 | 1 | 167 | 19 | 185 | 1.15e-116 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341060 | sp|Q54XK2|SC61A_DICDI | 70.886 | 158 | 45 | 1 | 1 | 158 | 308 | 464 | 1.31e-78 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341060 | E3NYG5 | 97.590 | 166 | 4 | 0 | 2 | 167 | 1 | 166 | 3.65e-116 | 335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1341060 | 0.823759 | 1.164996e-53 | -8.615850e-47 |
| Msa0001830 | Msa1341060 | 0.831310 | 1.795210e-55 | -8.615850e-47 |
| Msa0008200 | Msa1341060 | 0.829448 | 5.118519e-55 | -8.615850e-47 |
| Msa0010490 | Msa1341060 | 0.833834 | 4.247345e-56 | -8.615850e-47 |
| Msa0010500 | Msa1341060 | 0.821237 | 4.493213e-53 | -8.615850e-47 |
| Msa0020390 | Msa1341060 | 0.818108 | 2.327766e-52 | -8.615850e-47 |
| Msa0023480 | Msa1341060 | 0.836979 | 6.810245e-57 | -8.615850e-47 |
| Msa0030300 | Msa1341060 | 0.804663 | 1.938660e-49 | -8.615850e-47 |
| Msa0032470 | Msa1341060 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
| Msa0032590 | Msa1341060 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
| Msa0033110 | Msa1341060 | 0.828923 | 6.863243e-55 | -8.615850e-47 |
| Msa0033260 | Msa1341060 | 0.823291 | 1.499396e-53 | -8.615850e-47 |
| Msa0036540 | Msa1341060 | 0.854491 | 1.188057e-61 | -8.615850e-47 |
| Msa0037250 | Msa1341060 | 0.835996 | 1.211909e-56 | -8.615850e-47 |
| Msa0044000 | Msa1341060 | 0.800395 | 1.470851e-48 | -8.615850e-47 |
| Msa0059840 | Msa1341060 | 0.815508 | 8.916606e-52 | -8.615850e-47 |
| Msa0059950 | Msa1341060 | 0.833995 | 3.871675e-56 | -8.615850e-47 |
| Msa0068020 | Msa1341060 | 0.819041 | 1.430006e-52 | -8.615850e-47 |
| Msa0071250 | Msa1341060 | 0.827579 | 1.447137e-54 | -8.615850e-47 |
| Msa0072420 | Msa1341060 | 0.912252 | 2.408503e-83 | -8.615850e-47 |
| Msa0074490 | Msa1341060 | 0.835774 | 1.379334e-56 | -8.615850e-47 |
| Msa0080730 | Msa1341060 | 0.824899 | 6.285626e-54 | -8.615850e-47 |
| Msa0081780 | Msa1341060 | 0.800596 | 1.338060e-48 | -8.615850e-47 |
| Msa0090360 | Msa1341060 | 0.803787 | 2.951150e-49 | -8.615850e-47 |
| Msa0090520 | Msa1341060 | 0.836560 | 8.711442e-57 | -8.615850e-47 |
| Msa0090550 | Msa1341060 | 0.813513 | 2.463626e-51 | -8.615850e-47 |
| Msa0090570 | Msa1341060 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0091410 | Msa1341060 | 0.825624 | 4.234265e-54 | -8.615850e-47 |
| Msa0091610 | Msa1341060 | 0.802117 | 6.533188e-49 | -8.615850e-47 |
| Msa0093010 | Msa1341060 | 0.854693 | 1.038712e-61 | -8.615850e-47 |
| Msa0095360 | Msa1341060 | 0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0095770 | Msa1341060 | 0.801818 | 7.524268e-49 | -8.615850e-47 |
| Msa0103790 | Msa1341060 | 0.819917 | 9.030360e-53 | -8.615850e-47 |
| Msa0106710 | Msa1341060 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0108140 | Msa1341060 | 0.812430 | 4.256395e-51 | -8.615850e-47 |
| Msa0108760 | Msa1341060 | 0.821370 | 4.186215e-53 | -8.615850e-47 |
| Msa0115790 | Msa1341060 | 0.841694 | 4.068433e-58 | -8.615850e-47 |
| Msa0116380 | Msa1341060 | 0.842410 | 2.629693e-58 | -8.615850e-47 |
| Msa0603570 | Msa1341060 | 0.801949 | 7.072296e-49 | -8.615850e-47 |
| Msa0604290 | Msa1341060 | 0.851627 | 7.845625e-61 | -8.615850e-47 |
| Msa0607690 | Msa1341060 | 0.828825 | 7.249510e-55 | -8.615850e-47 |
| Msa0610250 | Msa1341060 | 0.823408 | 1.407825e-53 | -8.615850e-47 |
| Msa0610550 | Msa1341060 | 0.852657 | 3.997028e-61 | -8.615850e-47 |
| Msa0622790 | Msa1341060 | 0.828658 | 7.952725e-55 | -8.615850e-47 |
| Msa0625700 | Msa1341060 | 0.845467 | 3.987968e-59 | -8.615850e-47 |
| Msa0629240 | Msa1341060 | 0.802376 | 5.776446e-49 | -8.615850e-47 |
| Msa0634890 | Msa1341060 | 0.864887 | 8.799727e-65 | -8.615850e-47 |
| Msa0642970 | Msa1341060 | 0.848514 | 5.840139e-60 | -8.615850e-47 |
| Msa0649220 | Msa1341060 | 0.827183 | 1.800644e-54 | -8.615850e-47 |
| Msa0651050 | Msa1341060 | 0.800284 | 1.549020e-48 | -8.615850e-47 |
| Msa0661300 | Msa1341060 | 0.804351 | 2.252060e-49 | -8.615850e-47 |
| Msa0662220 | Msa1341060 | 0.802887 | 4.531971e-49 | -8.615850e-47 |
| Msa0662630 | Msa1341060 | 0.804578 | 2.019604e-49 | -8.615850e-47 |
| Msa0665100 | Msa1341060 | 0.810572 | 1.078538e-50 | -8.615850e-47 |
| Msa0665860 | Msa1341060 | 0.817005 | 4.126510e-52 | -8.615850e-47 |
| Msa0672100 | Msa1341060 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0673160 | Msa1341060 | 0.856836 | 2.456811e-62 | -8.615850e-47 |
| Msa0673630 | Msa1341060 | 0.812027 | 5.213306e-51 | -8.615850e-47 |
| Msa0677530 | Msa1341060 | 0.806656 | 7.399184e-50 | -8.615850e-47 |
| Msa0679360 | Msa1341060 | 0.810195 | 1.300670e-50 | -8.615850e-47 |
| Msa0682680 | Msa1341060 | 0.858690 | 6.927535e-63 | -8.615850e-47 |
| Msa0689320 | Msa1341060 | 0.868880 | 4.697112e-66 | -8.615850e-47 |
| Msa0689440 | Msa1341060 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0692980 | Msa1341060 | 0.808035 | 3.774591e-50 | -8.615850e-47 |
| Msa0693210 | Msa1341060 | 0.830453 | 2.911746e-55 | -8.615850e-47 |
| Msa0698780 | Msa1341060 | 0.838810 | 2.305411e-57 | -8.615850e-47 |
| Msa0702700 | Msa1341060 | 0.803701 | 3.074477e-49 | -8.615850e-47 |
| Msa0703810 | Msa1341060 | 0.815626 | 8.393751e-52 | -8.615850e-47 |
| Msa0705010 | Msa1341060 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0707250 | Msa1341060 | 0.812713 | 3.691854e-51 | -8.615850e-47 |
| Msa0709120 | Msa1341060 | 0.800593 | 1.340288e-48 | -8.615850e-47 |
| Msa0719180 | Msa1341060 | 0.878735 | 2.208285e-69 | -8.615850e-47 |
| Msa0741440 | Msa1341060 | 0.881699 | 1.931446e-70 | -8.615850e-47 |
| Msa0746170 | Msa1341060 | 0.814225 | 1.716934e-51 | -8.615850e-47 |
| Msa0746210 | Msa1341060 | 0.816045 | 6.770080e-52 | -8.615850e-47 |
| Msa0747630 | Msa1341060 | 0.835421 | 1.694951e-56 | -8.615850e-47 |
| Msa0769970 | Msa1341060 | 0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0780930 | Msa1341060 | 0.800967 | 1.124215e-48 | -8.615850e-47 |
| Msa0786750 | Msa1341060 | 0.817299 | 3.543223e-52 | -8.615850e-47 |
| Msa0787050 | Msa1341060 | -0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0796580 | Msa1341060 | -0.828750 | 7.555887e-55 | -8.615850e-47 |
| Msa0796620 | Msa1341060 | 0.802318 | 5.938208e-49 | -8.615850e-47 |
| Msa0800370 | Msa1341060 | 0.847851 | 8.900165e-60 | -8.615850e-47 |
| Msa0800480 | Msa1341060 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa0808800 | Msa1341060 | 0.824820 | 6.562450e-54 | -8.615850e-47 |
| Msa0822310 | Msa1341060 | -0.820657 | 6.108835e-53 | -8.615850e-47 |
| Msa0822500 | Msa1341060 | 0.844531 | 7.135136e-59 | -8.615850e-47 |
| Msa0828590 | Msa1341060 | 0.827555 | 1.466403e-54 | -8.615850e-47 |
| Msa0833190 | Msa1341060 | -0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0833950 | Msa1341060 | -0.808743 | 2.666201e-50 | -8.615850e-47 |
| Msa0120880 | Msa1341060 | 0.825822 | 3.801571e-54 | -8.615850e-47 |
| Msa0122530 | Msa1341060 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0125450 | Msa1341060 | 0.802667 | 5.032080e-49 | -8.615850e-47 |
| Msa0127800 | Msa1341060 | 0.802530 | 5.370423e-49 | -8.615850e-47 |
| Msa0136120 | Msa1341060 | 0.812128 | 4.954169e-51 | -8.615850e-47 |
| Msa0137990 | Msa1341060 | 0.837340 | 5.508181e-57 | -8.615850e-47 |
| Msa0139550 | Msa1341060 | -0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0140770 | Msa1341060 | -0.811090 | 8.329116e-51 | -8.615850e-47 |
| Msa0140820 | Msa1341060 | 0.804115 | 2.521567e-49 | -8.615850e-47 |
| Msa0144430 | Msa1341060 | 0.801007 | 1.103097e-48 | -8.615850e-47 |
| Msa0148080 | Msa1341060 | 0.853685 | 2.029216e-61 | -8.615850e-47 |
| Msa0149440 | Msa1341060 | 0.805603 | 1.232738e-49 | -8.615850e-47 |
| Msa0150230 | Msa1341060 | 0.827044 | 1.944351e-54 | -8.615850e-47 |
| Msa0150260 | Msa1341060 | 0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0150300 | Msa1341060 | 0.828767 | 7.487299e-55 | -8.615850e-47 |
| Msa0150860 | Msa1341060 | 0.805805 | 1.117788e-49 | -8.615850e-47 |
| Msa0159420 | Msa1341060 | 0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa0160960 | Msa1341060 | 0.801437 | 9.007589e-49 | -8.615850e-47 |
| Msa0162630 | Msa1341060 | 0.827916 | 1.200848e-54 | -8.615850e-47 |
| Msa0167980 | Msa1341060 | 0.807255 | 5.526300e-50 | -8.615850e-47 |
| Msa0168800 | Msa1341060 | 0.802816 | 4.688907e-49 | -8.615850e-47 |
| Msa0170430 | Msa1341060 | 0.841058 | 5.981962e-58 | -8.615850e-47 |
| Msa0173800 | Msa1341060 | 0.809152 | 2.179196e-50 | -8.615850e-47 |
| Msa0174090 | Msa1341060 | 0.816855 | 4.459702e-52 | -8.615850e-47 |
| Msa0178950 | Msa1341060 | 0.807541 | 4.806373e-50 | -8.615850e-47 |
| Msa0183850 | Msa1341060 | 0.816156 | 6.394931e-52 | -8.615850e-47 |
| Msa0183900 | Msa1341060 | 0.821933 | 3.102618e-53 | -8.615850e-47 |
| Msa0184040 | Msa1341060 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
| Msa0188350 | Msa1341060 | 0.803531 | 3.335199e-49 | -8.615850e-47 |
| Msa0190590 | Msa1341060 | 0.827389 | 1.607430e-54 | -8.615850e-47 |
| Msa0191070 | Msa1341060 | 0.801220 | 9.978993e-49 | -8.615850e-47 |
| Msa0194920 | Msa1341060 | 0.821008 | 5.071556e-53 | -8.615850e-47 |
| Msa0202490 | Msa1341060 | 0.878368 | 2.971988e-69 | -8.615850e-47 |
| Msa0204960 | Msa1341060 | 0.892187 | 2.000532e-74 | -8.615850e-47 |
| Msa0206690 | Msa1341060 | 0.802537 | 5.351794e-49 | -8.615850e-47 |
| Msa0207040 | Msa1341060 | -0.801194 | 1.010171e-48 | -8.615850e-47 |
| Msa0207670 | Msa1341060 | 0.863069 | 3.237391e-64 | -8.615850e-47 |
| Msa0207700 | Msa1341060 | 0.818253 | 2.158880e-52 | -8.615850e-47 |
| Msa0209350 | Msa1341060 | 0.871101 | 8.831774e-67 | -8.615850e-47 |
| Msa0209500 | Msa1341060 | 0.858123 | 1.022074e-62 | -8.615850e-47 |
| Msa0215990 | Msa1341060 | 0.810545 | 1.092962e-50 | -8.615850e-47 |
| Msa0217670 | Msa1341060 | 0.853277 | 2.657633e-61 | -8.615850e-47 |
| Msa0220400 | Msa1341060 | -0.809002 | 2.346360e-50 | -8.615850e-47 |
| Msa0232790 | Msa1341060 | 0.832087 | 1.154813e-55 | -8.615850e-47 |
| Msa0233630 | Msa1341060 | -0.802862 | 4.586142e-49 | -8.615850e-47 |
| Msa0234410 | Msa1341060 | -0.826539 | 2.567112e-54 | -8.615850e-47 |
| Msa1228040 | Msa1341060 | 0.831629 | 1.497464e-55 | -8.615850e-47 |
| Msa1231840 | Msa1341060 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
| Msa1233850 | Msa1341060 | 0.855237 | 7.219881e-62 | -8.615850e-47 |
| Msa1235460 | Msa1341060 | 0.859355 | 4.379835e-63 | -8.615850e-47 |
| Msa1244600 | Msa1341060 | 0.819974 | 8.762008e-53 | -8.615850e-47 |
| Msa1254730 | Msa1341060 | 0.824458 | 7.982782e-54 | -8.615850e-47 |
| Msa1258030 | Msa1341060 | -0.832956 | 7.031883e-56 | -8.615850e-47 |
| Msa1262890 | Msa1341060 | 0.817597 | 3.037057e-52 | -8.615850e-47 |
| Msa1264210 | Msa1341060 | 0.819216 | 1.304661e-52 | -8.615850e-47 |
| Msa1267970 | Msa1341060 | 0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa1269790 | Msa1341060 | 0.803298 | 3.726696e-49 | -8.615850e-47 |
| Msa1271130 | Msa1341060 | 0.825681 | 4.105259e-54 | -8.615850e-47 |
| Msa1276150 | Msa1341060 | 0.854785 | 9.768934e-62 | -8.615850e-47 |
| Msa1277410 | Msa1341060 | 0.841216 | 5.434273e-58 | -8.615850e-47 |
| Msa1294820 | Msa1341060 | 0.815827 | 7.573011e-52 | -8.615850e-47 |
| Msa1296830 | Msa1341060 | 0.816352 | 5.779706e-52 | -8.615850e-47 |
| Msa1297050 | Msa1341060 | -0.825842 | 3.759171e-54 | -8.615850e-47 |
| Msa1305810 | Msa1341060 | 0.807343 | 5.293579e-50 | -8.615850e-47 |
| Msa1307140 | Msa1341060 | 0.818184 | 2.238228e-52 | -8.615850e-47 |
| Msa1307160 | Msa1341060 | 0.833522 | 5.080401e-56 | -8.615850e-47 |
| Msa1307180 | Msa1341060 | 0.865999 | 3.928392e-65 | -8.615850e-47 |
| Msa1308220 | Msa1341060 | 0.819146 | 1.353797e-52 | -8.615850e-47 |
| Msa1315750 | Msa1341060 | 0.840248 | 9.748686e-58 | -8.615850e-47 |
| Msa1315890 | Msa1341060 | 0.859974 | 2.853453e-63 | -8.615850e-47 |
| Msa1316360 | Msa1341060 | 0.868855 | 4.786171e-66 | -8.615850e-47 |
| Msa1331320 | Msa1341060 | 0.807034 | 6.157032e-50 | -8.615850e-47 |
| Msa1336560 | Msa1341060 | 0.854422 | 1.244148e-61 | -8.615850e-47 |
| Msa1341060 | Msa1345100 | 0.831812 | 1.349962e-55 | -8.615850e-47 |
| Msa1341060 | Msa1345940 | 0.824834 | 6.510623e-54 | -8.615850e-47 |
| Msa1341060 | Msa1346840 | 0.853530 | 2.248279e-61 | -8.615850e-47 |
| Msa1341060 | Msa1351540 | 0.829538 | 4.866259e-55 | -8.615850e-47 |
| Msa1341060 | Msa1352890 | 0.832548 | 8.879507e-56 | -8.615850e-47 |
| Msa1341060 | Msa1360980 | 0.809195 | 2.133635e-50 | -8.615850e-47 |
| Msa1341060 | Msa1364210 | 0.818631 | 1.772584e-52 | -8.615850e-47 |
| Msa1341060 | Msa1364350 | -0.852912 | 3.381159e-61 | -8.615850e-47 |
| Msa1341060 | Msa1365800 | 0.846522 | 2.059819e-59 | -8.615850e-47 |
| Msa1341060 | Msa1368530 | 0.840966 | 6.324644e-58 | -8.615850e-47 |
| Msa1341060 | Msa1368710 | 0.816012 | 6.885023e-52 | -8.615850e-47 |
| Msa1341060 | Msa1370590 | 0.846705 | 1.836120e-59 | -8.615850e-47 |
| Msa1341060 | Msa1372770 | -0.824607 | 7.365969e-54 | -8.615850e-47 |
| Msa1341060 | Msa1374830 | 0.813801 | 2.129964e-51 | -8.615850e-47 |
| Msa1341060 | Msa1376660 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
| Msa1341060 | Msa1384100 | 0.846419 | 2.197620e-59 | -8.615850e-47 |
| Msa1341060 | Msa1385730 | 0.851929 | 6.440575e-61 | -8.615850e-47 |
| Msa1341060 | Msa1392980 | 0.872062 | 4.243776e-67 | -8.615850e-47 |
| Msa1341060 | Msa1393570 | 0.805025 | 1.629224e-49 | -8.615850e-47 |
| Msa1341060 | Msa1395730 | 0.834947 | 2.232141e-56 | -8.615850e-47 |
| Msa1341060 | Msa1395970 | 0.831388 | 1.717537e-55 | -8.615850e-47 |
| Msa1341060 | Msa1401990 | 0.828982 | 6.640390e-55 | -8.615850e-47 |
| Msa1341060 | Msa1404940 | 0.806505 | 7.960863e-50 | -8.615850e-47 |
| Msa1341060 | Msa1407190 | 0.847752 | 9.478296e-60 | -8.615850e-47 |
| Msa1341060 | Msa1407760 | 0.834064 | 3.719418e-56 | -8.615850e-47 |
| Msa1341060 | Msa1418340 | 0.802659 | 5.050178e-49 | -8.615850e-47 |
| Msa1341060 | Msa1419690 | 0.839742 | 1.321146e-57 | -8.615850e-47 |
| Msa1341060 | Msa1419870 | 0.815698 | 8.089214e-52 | -8.615850e-47 |
| Msa1341060 | Msa1428880 | 0.843560 | 1.299508e-58 | -8.615850e-47 |
| Msa1341060 | Msa1432130 | 0.827444 | 1.558992e-54 | -8.615850e-47 |
| Msa1341060 | Msa1433390 | 0.808291 | 3.329722e-50 | -8.615850e-47 |
| Msa1341060 | Msa1434420 | -0.806915 | 6.522515e-50 | -8.615850e-47 |
| Msa1341060 | Msa1435170 | -0.816852 | 4.465511e-52 | -8.615850e-47 |
| Msa1341060 | Msa1435390 | 0.832660 | 8.328852e-56 | -8.615850e-47 |
| Msa1341060 | Msa1436520 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa1341060 | Msa1437730 | 0.838379 | 2.978293e-57 | -8.615850e-47 |
| Msa1341060 | Msa1437860 | 0.856213 | 3.745560e-62 | -8.615850e-47 |
| Msa1341060 | Msa1444120 | 0.837711 | 4.422905e-57 | -8.615850e-47 |
| Msa1341060 | Msa1451560 | 0.802225 | 6.205134e-49 | -8.615850e-47 |
| Msa1341060 | Msa1452710 | 0.809254 | 2.072200e-50 | -8.615850e-47 |
| Msa1341060 | Msa1453880 | 0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa1341060 | Msa1457620 | 0.846007 | 2.845174e-59 | -8.615850e-47 |
| Msa1341060 | Msa1458290 | 0.832931 | 7.134010e-56 | -8.615850e-47 |
| Msa0365700 | Msa1341060 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
| Msa0367760 | Msa1341060 | 0.855242 | 7.195557e-62 | -8.615850e-47 |
| Msa0370580 | Msa1341060 | -0.831417 | 1.689575e-55 | -8.615850e-47 |
| Msa0374340 | Msa1341060 | -0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0374930 | Msa1341060 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
| Msa0377820 | Msa1341060 | 0.802385 | 5.753180e-49 | -8.615850e-47 |
| Msa0379690 | Msa1341060 | 0.825127 | 5.552120e-54 | -8.615850e-47 |
| Msa0380100 | Msa1341060 | 0.840128 | 1.047569e-57 | -8.615850e-47 |
| Msa0380300 | Msa1341060 | 0.807239 | 5.570619e-50 | -8.615850e-47 |
| Msa0385500 | Msa1341060 | 0.914314 | 2.216577e-84 | -8.615850e-47 |
| Msa0386800 | Msa1341060 | 0.815716 | 8.015401e-52 | -8.615850e-47 |
| Msa0388700 | Msa1341060 | 0.803730 | 3.032383e-49 | -8.615850e-47 |
| Msa0389210 | Msa1341060 | 0.838190 | 3.331655e-57 | -8.615850e-47 |
| Msa0398670 | Msa1341060 | 0.864375 | 1.271949e-64 | -8.615850e-47 |
| Msa0403770 | Msa1341060 | 0.828929 | 6.839189e-55 | -8.615850e-47 |
| Msa0404630 | Msa1341060 | 0.831986 | 1.222954e-55 | -8.615850e-47 |
| Msa0404910 | Msa1341060 | 0.807575 | 4.727030e-50 | -8.615850e-47 |
| Msa0419720 | Msa1341060 | 0.825746 | 3.961767e-54 | -8.615850e-47 |
| Msa0423750 | Msa1341060 | 0.825349 | 4.921574e-54 | -8.615850e-47 |
| Msa0426580 | Msa1341060 | 0.839995 | 1.135027e-57 | -8.615850e-47 |
| Msa0431980 | Msa1341060 | 0.822582 | 2.193625e-53 | -8.615850e-47 |
| Msa0450400 | Msa1341060 | -0.801182 | 1.015821e-48 | -8.615850e-47 |
| Msa0460740 | Msa1341060 | 0.854023 | 1.622344e-61 | -8.615850e-47 |
| Msa0462600 | Msa1341060 | 0.836229 | 1.057563e-56 | -8.615850e-47 |
| Msa0466350 | Msa1341060 | 0.807877 | 4.077226e-50 | -8.615850e-47 |
| Msa0467730 | Msa1341060 | 0.803920 | 2.768585e-49 | -8.615850e-47 |
| Msa0479270 | Msa1341060 | 0.809981 | 1.446429e-50 | -8.615850e-47 |
| Msa0479760 | Msa1341060 | -0.804602 | 1.997007e-49 | -8.615850e-47 |
| Msa0980540 | Msa1341060 | 0.857839 | 1.241746e-62 | -8.615850e-47 |
| Msa0980880 | Msa1341060 | 0.807614 | 4.637060e-50 | -8.615850e-47 |
| Msa0985180 | Msa1341060 | 0.821653 | 3.600556e-53 | -8.615850e-47 |
| Msa0992510 | Msa1341060 | 0.829808 | 4.183359e-55 | -8.615850e-47 |
| Msa1021470 | Msa1341060 | 0.806861 | 6.697996e-50 | -8.615850e-47 |
| Msa1021520 | Msa1341060 | 0.854146 | 1.494665e-61 | -8.615850e-47 |
| Msa1029050 | Msa1341060 | 0.844922 | 5.600063e-59 | -8.615850e-47 |
| Msa1031660 | Msa1341060 | 0.813749 | 2.186481e-51 | -8.615850e-47 |
| Msa1035750 | Msa1341060 | 0.819662 | 1.032380e-52 | -8.615850e-47 |
| Msa1037520 | Msa1341060 | 0.822860 | 1.889664e-53 | -8.615850e-47 |
| Msa1039810 | Msa1341060 | 0.819797 | 9.616077e-53 | -8.615850e-47 |
| Msa1039900 | Msa1341060 | 0.859783 | 3.256072e-63 | -8.615850e-47 |
| Msa1059300 | Msa1341060 | 0.840303 | 9.429091e-58 | -8.615850e-47 |
| Msa1059470 | Msa1341060 | 0.880350 | 5.899890e-70 | -8.615850e-47 |
| Msa1060260 | Msa1341060 | 0.809070 | 2.269003e-50 | -8.615850e-47 |
| Msa1062040 | Msa1341060 | 0.805743 | 1.152012e-49 | -8.615850e-47 |
| Msa1070720 | Msa1341060 | 0.818347 | 2.055142e-52 | -8.615850e-47 |
| Msa1081930 | Msa1341060 | 0.840128 | 1.047569e-57 | -8.615850e-47 |
| Msa1089320 | Msa1341060 | 0.820443 | 6.840930e-53 | -8.615850e-47 |
| Msa1089450 | Msa1341060 | 0.836847 | 7.359202e-57 | -8.615850e-47 |
| Msa1089460 | Msa1341060 | 0.806840 | 6.764780e-50 | -8.615850e-47 |
| Msa1096070 | Msa1341060 | 0.827822 | 1.265074e-54 | -8.615850e-47 |
| Msa0240900 | Msa1341060 | 0.837472 | 5.094263e-57 | -8.615850e-47 |
| Msa0240920 | Msa1341060 | 0.844118 | 9.214208e-59 | -8.615850e-47 |
| Msa0243090 | Msa1341060 | 0.828429 | 9.034046e-55 | -8.615850e-47 |
| Msa0244980 | Msa1341060 | 0.838165 | 3.381786e-57 | -8.615850e-47 |
| Msa0245430 | Msa1341060 | 0.802608 | 5.175576e-49 | -8.615850e-47 |
| Msa0245580 | Msa1341060 | 0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0249580 | Msa1341060 | 0.808752 | 2.653502e-50 | -8.615850e-47 |
| Msa0249860 | Msa1341060 | 0.828230 | 1.008977e-54 | -8.615850e-47 |
| Msa0256140 | Msa1341060 | 0.839128 | 1.906573e-57 | -8.615850e-47 |
| Msa0257490 | Msa1341060 | 0.880923 | 3.677334e-70 | -8.615850e-47 |
| Msa0257520 | Msa1341060 | 0.821281 | 4.389319e-53 | -8.615850e-47 |
| Msa0258390 | Msa1341060 | 0.801501 | 8.741197e-49 | -8.615850e-47 |
| Msa0259680 | Msa1341060 | 0.815228 | 1.029600e-51 | -8.615850e-47 |
| Msa0269470 | Msa1341060 | 0.851156 | 1.066110e-60 | -8.615850e-47 |
| Msa0272300 | Msa1341060 | 0.861161 | 1.245842e-63 | -8.615850e-47 |
| Msa0281530 | Msa1341060 | 0.878135 | 3.587352e-69 | -8.615850e-47 |
| Msa0283420 | Msa1341060 | 0.822889 | 1.860530e-53 | -8.615850e-47 |
| Msa0284180 | Msa1341060 | 0.881951 | 1.565543e-70 | -8.615850e-47 |
| Msa0285330 | Msa1341060 | 0.801590 | 8.379909e-49 | -8.615850e-47 |
| Msa0296790 | Msa1341060 | 0.856942 | 2.286686e-62 | -8.615850e-47 |
| Msa0304730 | Msa1341060 | 0.801830 | 7.483321e-49 | -8.615850e-47 |
| Msa0305410 | Msa1341060 | 0.820792 | 5.688332e-53 | -8.615850e-47 |
| Msa0317910 | Msa1341060 | 0.815248 | 1.019075e-51 | -8.615850e-47 |
| Msa0317940 | Msa1341060 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0317960 | Msa1341060 | 0.800729 | 1.256969e-48 | -8.615850e-47 |
| Msa0317970 | Msa1341060 | 0.844475 | 7.390103e-59 | -8.615850e-47 |
| Msa0318680 | Msa1341060 | 0.852365 | 4.842090e-61 | -8.615850e-47 |
| Msa0319640 | Msa1341060 | 0.826837 | 2.178472e-54 | -8.615850e-47 |
| Msa0320590 | Msa1341060 | 0.839672 | 1.377132e-57 | -8.615850e-47 |
| Msa0321690 | Msa1341060 | 0.843486 | 1.360412e-58 | -8.615850e-47 |
| Msa0322240 | Msa1341060 | 0.831594 | 1.527730e-55 | -8.615850e-47 |
| Msa0326480 | Msa1341060 | 0.822396 | 2.422073e-53 | -8.615850e-47 |
| Msa0336450 | Msa1341060 | 0.840905 | 6.559155e-58 | -8.615850e-47 |
| Msa0336540 | Msa1341060 | 0.825248 | 5.199226e-54 | -8.615850e-47 |
| Msa0340380 | Msa1341060 | 0.810010 | 1.425622e-50 | -8.615850e-47 |
| Msa0341480 | Msa1341060 | 0.828288 | 9.770417e-55 | -8.615850e-47 |
| Msa0341780 | Msa1341060 | -0.810369 | 1.193102e-50 | -8.615850e-47 |
| Msa0343500 | Msa1341060 | 0.843912 | 1.046612e-58 | -8.615850e-47 |
| Msa0357900 | Msa1341060 | 0.855903 | 4.615440e-62 | -8.615850e-47 |
| Msa0363640 | Msa1341060 | 0.811900 | 5.554594e-51 | -8.615850e-47 |
| Msa1117240 | Msa1341060 | 0.821904 | 3.150534e-53 | -8.615850e-47 |
| Msa1118860 | Msa1341060 | 0.814757 | 1.309734e-51 | -8.615850e-47 |
| Msa1122310 | Msa1341060 | -0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa1123780 | Msa1341060 | 0.846788 | 1.742520e-59 | -8.615850e-47 |
| Msa1126830 | Msa1341060 | 0.856971 | 2.242171e-62 | -8.615850e-47 |
| Msa1128270 | Msa1341060 | 0.839684 | 1.367813e-57 | -8.615850e-47 |
| Msa1128280 | Msa1341060 | 0.880333 | 5.986107e-70 | -8.615850e-47 |
| Msa1130980 | Msa1341060 | 0.807093 | 5.981213e-50 | -8.615850e-47 |
| Msa1133230 | Msa1341060 | 0.810425 | 1.159963e-50 | -8.615850e-47 |
| Msa1137780 | Msa1341060 | 0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa1148910 | Msa1341060 | 0.802738 | 4.866231e-49 | -8.615850e-47 |
| Msa1158640 | Msa1341060 | -0.880102 | 7.234532e-70 | -8.615850e-47 |
| Msa1160590 | Msa1341060 | 0.812696 | 3.723361e-51 | -8.615850e-47 |
| Msa1165270 | Msa1341060 | 0.878848 | 2.014669e-69 | -8.615850e-47 |
| Msa1165780 | Msa1341060 | 0.850065 | 2.159780e-60 | -8.615850e-47 |
| Msa1165940 | Msa1341060 | 0.831897 | 1.286749e-55 | -8.615850e-47 |
| Msa1168580 | Msa1341060 | 0.803798 | 2.935048e-49 | -8.615850e-47 |
| Msa1169920 | Msa1341060 | 0.852536 | 4.327392e-61 | -8.615850e-47 |
| Msa1175200 | Msa1341060 | 0.819638 | 1.045449e-52 | -8.615850e-47 |
| Msa1175350 | Msa1341060 | 0.855849 | 4.786794e-62 | -8.615850e-47 |
| Msa1176170 | Msa1341060 | 0.814837 | 1.256954e-51 | -8.615850e-47 |
| Msa1176380 | Msa1341060 | 0.801390 | 9.208774e-49 | -8.615850e-47 |
| Msa1176720 | Msa1341060 | 0.823645 | 1.239097e-53 | -8.615850e-47 |
| Msa1178580 | Msa1341060 | 0.854908 | 8.995896e-62 | -8.615850e-47 |
| Msa1184230 | Msa1341060 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa1196610 | Msa1341060 | -0.810530 | 1.101209e-50 | -8.615850e-47 |
| Msa1206650 | Msa1341060 | 0.820723 | 5.900776e-53 | -8.615850e-47 |
| Msa1207310 | Msa1341060 | 0.807724 | 4.395680e-50 | -8.615850e-47 |
| Msa1208020 | Msa1341060 | 0.804983 | 1.661956e-49 | -8.615850e-47 |
| Msa1209200 | Msa1341060 | 0.828653 | 7.978344e-55 | -8.615850e-47 |
| Msa0482940 | Msa1341060 | 0.842298 | 2.815863e-58 | -8.615850e-47 |
| Msa0485710 | Msa1341060 | 0.862389 | 5.245822e-64 | -8.615850e-47 |
| Msa0511770 | Msa1341060 | 0.812931 | 3.306437e-51 | -8.615850e-47 |
| Msa0517590 | Msa1341060 | 0.834132 | 3.576541e-56 | -8.615850e-47 |
| Msa0518170 | Msa1341060 | 0.817677 | 2.912575e-52 | -8.615850e-47 |
| Msa0520850 | Msa1341060 | 0.825516 | 4.492052e-54 | -8.615850e-47 |
| Msa0527540 | Msa1341060 | 0.892342 | 1.734741e-74 | -8.615850e-47 |
| Msa0530300 | Msa1341060 | 0.835881 | 1.295801e-56 | -8.615850e-47 |
| Msa0531530 | Msa1341060 | 0.851620 | 7.884383e-61 | -8.615850e-47 |
| Msa0534870 | Msa1341060 | 0.810844 | 9.419293e-51 | -8.615850e-47 |
| Msa0539410 | Msa1341060 | 0.847658 | 1.006235e-59 | -8.615850e-47 |
| Msa0542290 | Msa1341060 | 0.833818 | 4.285758e-56 | -8.615850e-47 |
| Msa0542560 | Msa1341060 | 0.857777 | 1.295211e-62 | -8.615850e-47 |
| Msa0544840 | Msa1341060 | 0.869576 | 2.792675e-66 | -8.615850e-47 |
| Msa0547160 | Msa1341060 | 0.877617 | 5.441798e-69 | -8.615850e-47 |
| Msa0548240 | Msa1341060 | 0.837699 | 4.455949e-57 | -8.615850e-47 |
| Msa0549450 | Msa1341060 | 0.832281 | 1.034034e-55 | -8.615850e-47 |
| Msa0556060 | Msa1341060 | 0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0567350 | Msa1341060 | 0.824668 | 7.123482e-54 | -8.615850e-47 |
| Msa0574930 | Msa1341060 | 0.816420 | 5.580677e-52 | -8.615850e-47 |
| Msa0581110 | Msa1341060 | 0.858065 | 1.063424e-62 | -8.615850e-47 |
| Msa0581280 | Msa1341060 | 0.826699 | 2.350520e-54 | -8.615850e-47 |
| Msa0588260 | Msa1341060 | 0.870999 | 9.543068e-67 | -8.615850e-47 |
| Msa0595170 | Msa1341060 | 0.836382 | 9.671668e-57 | -8.615850e-47 |
| Msa0600080 | Msa1341060 | 0.814913 | 1.209345e-51 | -8.615850e-47 |
| Msa0600450 | Msa1341060 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0865030 | Msa1341060 | 0.856142 | 3.928093e-62 | -8.615850e-47 |
| Msa0872250 | Msa1341060 | 0.823559 | 1.297794e-53 | -8.615850e-47 |
| Msa0878220 | Msa1341060 | 0.829826 | 4.141979e-55 | -8.615850e-47 |
| Msa0881530 | Msa1341060 | -0.817770 | 2.774918e-52 | -8.615850e-47 |
| Msa0894710 | Msa1341060 | 0.807338 | 5.306745e-50 | -8.615850e-47 |
| Msa0944020 | Msa1341060 | 0.826230 | 3.040150e-54 | -8.615850e-47 |
| Msa0944200 | Msa1341060 | 0.840397 | 8.914786e-58 | -8.615850e-47 |
| Msa0958000 | Msa1341060 | 0.842167 | 3.049968e-58 | -8.615850e-47 |
| Msa0974950 | Msa1341060 | 0.832733 | 7.988307e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341060 | MtrunA17_Chr8g0372551 | 99.401 | 167 | 1 | 0 | 1 | 167 | 310 | 476 | 2.32e-119 | 345 |
| Msa1341060 | MtrunA17_Chr8g0359731 | 98.802 | 167 | 2 | 0 | 1 | 167 | 310 | 476 | 7.03e-119 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341060 | AT1G29310.1 | 90.419 | 167 | 15 | 1 | 1 | 167 | 310 | 475 | 7.23e-107 | 313 |
| Msa1341060 | AT1G29310.2 | 90.419 | 167 | 15 | 1 | 1 | 167 | 310 | 475 | 7.23e-107 | 313 |
| Msa1341060 | AT2G34250.2 | 89.820 | 167 | 16 | 1 | 1 | 167 | 310 | 475 | 2.12e-106 | 312 |
| Msa1341060 | AT2G34250.3 | 89.820 | 167 | 16 | 1 | 1 | 167 | 310 | 475 | 2.12e-106 | 312 |
| Msa1341060 | AT2G34250.1 | 89.820 | 167 | 16 | 1 | 1 | 167 | 310 | 475 | 2.12e-106 | 312 |
| Msa1341060 | AT1G78720.2 | 87.425 | 167 | 20 | 1 | 1 | 167 | 310 | 475 | 3.43e-104 | 306 |
| Msa1341060 | AT1G78720.1 | 87.425 | 167 | 20 | 1 | 1 | 167 | 310 | 475 | 3.43e-104 | 306 |
| Msa1341060 | AT1G78720.3 | 86.228 | 167 | 20 | 2 | 1 | 167 | 310 | 473 | 1.45e-100 | 297 |
Find 64 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGTCAAAAGGCAATTTA+TGG | 0.173483 | tig0004716:-2296 | None:intergenic |
| GCCAGTGAGCTTGGCTTCTT+TGG | 0.202385 | tig0004716:+1890 | Msa1341060:CDS |
| ACTATATCACTGCGCCTTCC+AGG | 0.327568 | tig0004716:+564 | Msa1341060:CDS |
| AAAACTACTCTTTGTCTTCA+AGG | 0.356808 | tig0004716:-1976 | None:intergenic |
| TCGTAAATCTGTTGGGGAAA+TGG | 0.359545 | tig0004716:+489 | Msa1341060:CDS |
| TTTATGGATTTAAGCATTGC+TGG | 0.363607 | tig0004716:-2280 | None:intergenic |
| TTTATGGGAGCAATAGGTTC+AGG | 0.371834 | tig0004716:+1803 | Msa1341060:CDS |
| CTTTCTGCAAGTTTGATTCA+CGG | 0.396011 | tig0004716:-1706 | None:intergenic |
| AACTTCATCGTAAATCTGTT+GGG | 0.400705 | tig0004716:+482 | Msa1341060:CDS |
| AAATGGAAGGAATCTGAATA+TGG | 0.402051 | tig0004716:+506 | Msa1341060:CDS |
| ATCCCCACTGCTGCAGCATT+CGG | 0.412466 | tig0004716:+1743 | Msa1341060:CDS |
| GCATTCGGAGGCATTTGTAT+TGG | 0.413794 | tig0004716:+1758 | Msa1341060:CDS |
| GTGCCTTGTTCTCTAAAACT+TGG | 0.421361 | tig0004716:+766 | Msa1341060:CDS |
| AAAGTGAGACAGGTTAGTTA+TGG | 0.435537 | tig0004716:+2119 | Msa1341060:three_prime_UTR |
| GAATTTGCAGGAACAACAAA+TGG | 0.436694 | tig0004716:+1670 | Msa1341060:intron |
| AGGTCTCTGGTTCATCTGCT+AGG | 0.447601 | tig0004716:+793 | Msa1341060:CDS |
| AAAACTTGGATTGAGGTCTC+TGG | 0.449518 | tig0004716:+780 | Msa1341060:CDS |
| GGAGCAATAGGTTCAGGGAC+AGG | 0.451698 | tig0004716:+1809 | Msa1341060:CDS |
| AAACTTCATCGTAAATCTGT+TGG | 0.487952 | tig0004716:+481 | Msa1341060:CDS |
| GTTCTCTAAAACTTGGATTG+AGG | 0.493225 | tig0004716:+773 | Msa1341060:CDS |
| CCTCCGAATGCTGCAGCAGT+GGG | 0.494724 | tig0004716:-1746 | None:intergenic |
| ACCAAAGAAGCCAAGCTCAC+TGG | 0.495667 | tig0004716:-1891 | None:intergenic |
| TGAAGTTTCCACTGTACTTA+CGG | 0.495825 | tig0004716:-466 | None:intergenic |
| AAGTTTGATTCACGGTGTCC+AGG | 0.496226 | tig0004716:-1698 | None:intergenic |
| CCATAGGTTAAAAGTGAGAC+AGG | 0.502432 | tig0004716:+2109 | Msa1341060:three_prime_UTR |
| TTATGGGAGCAATAGGTTCA+GGG | 0.506128 | tig0004716:+1804 | Msa1341060:CDS |
| GCCTCCGAATGCTGCAGCAG+TGG | 0.517678 | tig0004716:-1747 | None:intergenic |
| CCAAAACAAAAGTAATTGCT+TGG | 0.521064 | tig0004716:-1926 | None:intergenic |
| TACCACCATGGCAACACTCA+TGG | 0.523475 | tig0004716:-2167 | None:intergenic |
| TAGTATGCAATACCACCAAC+GGG | 0.525397 | tig0004716:-545 | None:intergenic |
| GTACTTTGAAACATTTGAGA+AGG | 0.527766 | tig0004716:+1862 | Msa1341060:CDS |
| GGATGTTGCAAAGCAATTGA+AGG | 0.529914 | tig0004716:+815 | Msa1341060:CDS |
| AGGATCTGAAGTACAGTACA+AGG | 0.531459 | tig0004716:-1956 | None:intergenic |
| CTGCAGCAGTGGGGATGTAT+CGG | 0.533364 | tig0004716:-1736 | None:intergenic |
| TTATGGATTTAAGCATTGCT+GGG | 0.535715 | tig0004716:-2279 | None:intergenic |
| GAACAACAAATGGTGATGCC+TGG | 0.539031 | tig0004716:+1680 | Msa1341060:CDS |
| GGTCTCTGGTTCATCTGCTA+GGG | 0.539177 | tig0004716:+794 | Msa1341060:CDS |
| GGTCACTCAATTCCCGTTGG+TGG | 0.543937 | tig0004716:+533 | Msa1341060:CDS |
| GAACAAAGCATGGAAAGGAT+TGG | 0.546371 | tig0004716:-718 | None:intergenic |
| GATCAGACTTCATGTGTTCA+AGG | 0.548278 | tig0004716:-2086 | None:intergenic |
| AAATCTGTTGGGGAAATGGA+AGG | 0.566664 | tig0004716:+493 | Msa1341060:CDS |
| GAGCAATAGGTTCAGGGACA+GGG | 0.568251 | tig0004716:+1810 | Msa1341060:CDS |
| TATTGGTGCTCTGACAGTGT+TGG | 0.574451 | tig0004716:+1775 | Msa1341060:CDS |
| CCCACTGCTGCAGCATTCGG+AGG | 0.578252 | tig0004716:+1746 | Msa1341060:CDS |
| GAACATGTCTCTTACCTGGA+AGG | 0.587398 | tig0004716:-578 | None:intergenic |
| AAACAAAAGTAATTGCTTGG+CGG | 0.588005 | tig0004716:-1923 | None:intergenic |
| ACACAAGATAGAACAAAGCA+TGG | 0.593205 | tig0004716:-728 | None:intergenic |
| ATAGTATGCAATACCACCAA+CGG | 0.597455 | tig0004716:-546 | None:intergenic |
| GTTATGGAAGCAGCCGTGTG+TGG | 0.598348 | tig0004716:+2135 | Msa1341060:three_prime_UTR |
| ACTTCATCGTAAATCTGTTG+GGG | 0.598993 | tig0004716:+483 | Msa1341060:CDS |
| AGATAGAACAAAGCATGGAA+AGG | 0.607824 | tig0004716:-723 | None:intergenic |
| AAGGAATCTGAATATGGAGG+TGG | 0.616063 | tig0004716:+512 | Msa1341060:CDS |
| AGATAACAAAGCTCTTTCAA+AGG | 0.626410 | tig0004716:-2202 | None:intergenic |
| GGTGGTCACTCAATTCCCGT+TGG | 0.629347 | tig0004716:+530 | Msa1341060:CDS |
| TGGAAGGAATCTGAATATGG+AGG | 0.634041 | tig0004716:+509 | Msa1341060:CDS |
| TCATGTGAAAACTACCACCA+TGG | 0.638446 | tig0004716:-2179 | None:intergenic |
| CTTCTCCACCGTAAGTACAG+TGG | 0.641971 | tig0004716:+458 | Msa1341060:CDS |
| ATTATCCATGAGTGTTGCCA+TGG | 0.648989 | tig0004716:+2162 | Msa1341060:three_prime_UTR |
| ATCCATGAGTGTTGCCATGG+TGG | 0.664970 | tig0004716:+2165 | Msa1341060:three_prime_UTR |
| ATGGATAATTATACCACACA+CGG | 0.673746 | tig0004716:-2148 | None:intergenic |
| GGATCTGAAGTACAGTACAA+GGG | 0.696732 | tig0004716:-1955 | None:intergenic |
| CACATGAAGTCTGATCCCAT+AGG | 0.713522 | tig0004716:+2093 | Msa1341060:three_prime_UTR |
| CTCCGAATGCTGCAGCAGTG+GGG | 0.715264 | tig0004716:-1745 | None:intergenic |
| AGTTTCCACTGTACTTACGG+TGG | 0.718747 | tig0004716:-463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTATAATTTAACTTTAA+AGG | + | tig0004716:1136-1155 | Msa1341060:intron | 10.0% |
| !!! | ATTGTTTTTAAAAATAAAAC+AGG | - | tig0004716:2353-2372 | None:intergenic | 10.0% |
| !!! | AGTTTATAATTTAACTTTAA+AGG | + | tig0004716:1136-1155 | Msa1341060:intron | 10.0% |
| !!! | ATTGTTTTTAAAAATAAAAC+AGG | - | tig0004716:2353-2372 | None:intergenic | 10.0% |
| !! | GAATTATCATAAGTATAATT+TGG | - | tig0004716:603-622 | None:intergenic | 15.0% |
| !! | CTAAATTAGTATACAATAAA+AGG | - | tig0004716:631-650 | None:intergenic | 15.0% |
| !! | TTATATTGCAAATACATTAT+AGG | - | tig0004716:897-916 | None:intergenic | 15.0% |
| !!! | ATAATTAAAAGCACAAATAT+TGG | - | tig0004716:941-960 | None:intergenic | 15.0% |
| !!! | ATCATAGTATTTTTTTTGTT+TGG | + | tig0004716:2036-2055 | Msa1341060:three_prime_UTR | 15.0% |
| !! | GAATTATCATAAGTATAATT+TGG | - | tig0004716:603-622 | None:intergenic | 15.0% |
| !! | CTAAATTAGTATACAATAAA+AGG | - | tig0004716:631-650 | None:intergenic | 15.0% |
| !! | TTATATTGCAAATACATTAT+AGG | - | tig0004716:897-916 | None:intergenic | 15.0% |
| !!! | ATAATTAAAAGCACAAATAT+TGG | - | tig0004716:941-960 | None:intergenic | 15.0% |
| !!! | ATCATAGTATTTTTTTTGTT+TGG | + | tig0004716:2036-2055 | Msa1341060:three_prime_UTR | 15.0% |
| !! | CAAAAGAATTATATAAATGG+TGG | - | tig0004716:664-683 | None:intergenic | 20.0% |
| !! | CAGCAAAAGAATTATATAAA+TGG | - | tig0004716:667-686 | None:intergenic | 20.0% |
| !! | TTAGAAACCAATAATACTTT+GGG | + | tig0004716:1089-1108 | Msa1341060:intron | 20.0% |
| !!! | TTTTATGAAGTTTTTGATGT+TGG | + | tig0004716:1484-1503 | Msa1341060:intron | 20.0% |
| !! | CAAAAGAATTATATAAATGG+TGG | - | tig0004716:664-683 | None:intergenic | 20.0% |
| !! | CAGCAAAAGAATTATATAAA+TGG | - | tig0004716:667-686 | None:intergenic | 20.0% |
| !! | TTAGAAACCAATAATACTTT+GGG | + | tig0004716:1089-1108 | Msa1341060:intron | 20.0% |
| !!! | TTTTATGAAGTTTTTGATGT+TGG | + | tig0004716:1484-1503 | Msa1341060:intron | 20.0% |
| ! | ATAGGTTTGGGAAAAAATAA+AGG | - | tig0004716:879-898 | None:intergenic | 25.0% |
| ! | TGCAAATACATTATAGGTTT+GGG | - | tig0004716:891-910 | None:intergenic | 25.0% |
| ! | TTGCAAATACATTATAGGTT+TGG | - | tig0004716:892-911 | None:intergenic | 25.0% |
| ! | ATTATTAGAGAAGATTAACC+TGG | + | tig0004716:956-975 | Msa1341060:intron | 25.0% |
| ! | AGTATTATATCACGTTAACA+GGG | - | tig0004716:1025-1044 | None:intergenic | 25.0% |
| ! | AAGTATTATATCACGTTAAC+AGG | - | tig0004716:1026-1045 | None:intergenic | 25.0% |
| !!! | CAAAGTATTATTGGTTTCTA+AGG | - | tig0004716:1090-1109 | None:intergenic | 25.0% |
| ! | CTTAGAAACCAATAATACTT+TGG | + | tig0004716:1088-1107 | Msa1341060:intron | 25.0% |
| !! | TTCTTAACCCAAAGTATTAT+TGG | - | tig0004716:1099-1118 | None:intergenic | 25.0% |
| !! | TTCTGTTCCAAATTTTTCTT+GGG | + | tig0004716:1372-1391 | Msa1341060:intron | 25.0% |
| !!! | CATATTGGTTTCTTACTTTA+AGG | - | tig0004716:1400-1419 | None:intergenic | 25.0% |
| ! | GGATAAATAAACAGACATAT+TGG | - | tig0004716:1415-1434 | None:intergenic | 25.0% |
| ! | TGTGTAATATCTGCTATATT+AGG | + | tig0004716:1618-1637 | Msa1341060:intron | 25.0% |
| !!! | ATACATGTTTTTGAATTTGC+AGG | + | tig0004716:1658-1677 | Msa1341060:intron | 25.0% |
| !! | TTTGCATATTTTATCAACTG+AGG | + | tig0004716:2003-2022 | Msa1341060:three_prime_UTR | 25.0% |
| !!! | TTTTTTAGTAGCAAGTCAAA+AGG | - | tig0004716:2309-2328 | None:intergenic | 25.0% |
| ! | ATAGGTTTGGGAAAAAATAA+AGG | - | tig0004716:879-898 | None:intergenic | 25.0% |
| ! | TGCAAATACATTATAGGTTT+GGG | - | tig0004716:891-910 | None:intergenic | 25.0% |
| ! | TTGCAAATACATTATAGGTT+TGG | - | tig0004716:892-911 | None:intergenic | 25.0% |
| ! | ATTATTAGAGAAGATTAACC+TGG | + | tig0004716:956-975 | Msa1341060:intron | 25.0% |
| ! | AGTATTATATCACGTTAACA+GGG | - | tig0004716:1025-1044 | None:intergenic | 25.0% |
| ! | AAGTATTATATCACGTTAAC+AGG | - | tig0004716:1026-1045 | None:intergenic | 25.0% |
| !!! | CAAAGTATTATTGGTTTCTA+AGG | - | tig0004716:1090-1109 | None:intergenic | 25.0% |
| ! | CTTAGAAACCAATAATACTT+TGG | + | tig0004716:1088-1107 | Msa1341060:intron | 25.0% |
| !! | TTCTTAACCCAAAGTATTAT+TGG | - | tig0004716:1099-1118 | None:intergenic | 25.0% |
| !! | TTCTGTTCCAAATTTTTCTT+GGG | + | tig0004716:1372-1391 | Msa1341060:intron | 25.0% |
| !!! | CATATTGGTTTCTTACTTTA+AGG | - | tig0004716:1400-1419 | None:intergenic | 25.0% |
| ! | GGATAAATAAACAGACATAT+TGG | - | tig0004716:1415-1434 | None:intergenic | 25.0% |
| ! | TGTGTAATATCTGCTATATT+AGG | + | tig0004716:1618-1637 | Msa1341060:intron | 25.0% |
| !!! | ATACATGTTTTTGAATTTGC+AGG | + | tig0004716:1658-1677 | Msa1341060:intron | 25.0% |
| !! | TTTGCATATTTTATCAACTG+AGG | + | tig0004716:2003-2022 | Msa1341060:three_prime_UTR | 25.0% |
| !!! | TTTTTTAGTAGCAAGTCAAA+AGG | - | tig0004716:2309-2328 | None:intergenic | 25.0% |
| AAACTTCATCGTAAATCTGT+TGG | + | tig0004716:481-500 | Msa1341060:CDS | 30.0% | |
| AACTTCATCGTAAATCTGTT+GGG | + | tig0004716:482-501 | Msa1341060:CDS | 30.0% | |
| AAATGGAAGGAATCTGAATA+TGG | + | tig0004716:506-525 | Msa1341060:CDS | 30.0% | |
| ! | ATTTTGCAGTTTAGCTGATA+TGG | + | tig0004716:692-711 | Msa1341060:intron | 30.0% |
| !!! | AATCCAAGTTTTAGAGAACA+AGG | - | tig0004716:772-791 | None:intergenic | 30.0% |
| ! | TTTATGATGCTTTTAGCCAT+TGG | + | tig0004716:994-1013 | Msa1341060:intron | 30.0% |
| AGCAAAATATTAGCTAGACT+TGG | + | tig0004716:1052-1071 | Msa1341060:intron | 30.0% | |
| GCAAAATATTAGCTAGACTT+GGG | + | tig0004716:1053-1072 | Msa1341060:intron | 30.0% | |
| TATCTCATATATGCTTTGTC+AGG | + | tig0004716:1268-1287 | Msa1341060:intron | 30.0% | |
| AACTCATATGCTTCTTATTC+TGG | - | tig0004716:1300-1319 | None:intergenic | 30.0% | |
| ! | AGAATAAGAAGCATATGAGT+TGG | + | tig0004716:1299-1318 | Msa1341060:intron | 30.0% |
| ! | GTTCTGTTCCAAATTTTTCT+TGG | + | tig0004716:1371-1390 | Msa1341060:intron | 30.0% |
| TAAGGATCCCAAGAAAAATT+TGG | - | tig0004716:1382-1401 | None:intergenic | 30.0% | |
| CATAAAACAACACAGATAAG+TGG | - | tig0004716:1471-1490 | None:intergenic | 30.0% | |
| !! | GTACTTTGAAACATTTGAGA+AGG | + | tig0004716:1862-1881 | Msa1341060:CDS | 30.0% |
| AAACAAAAGTAATTGCTTGG+CGG | - | tig0004716:1926-1945 | None:intergenic | 30.0% | |
| CCAAAACAAAAGTAATTGCT+TGG | - | tig0004716:1929-1948 | None:intergenic | 30.0% | |
| !! | CCAAGCAATTACTTTTGTTT+TGG | + | tig0004716:1926-1945 | Msa1341060:three_prime_UTR | 30.0% |
| AAAACTACTCTTTGTCTTCA+AGG | - | tig0004716:1979-1998 | None:intergenic | 30.0% | |
| ATGGATAATTATACCACACA+CGG | - | tig0004716:2151-2170 | None:intergenic | 30.0% | |
| AGATAACAAAGCTCTTTCAA+AGG | - | tig0004716:2205-2224 | None:intergenic | 30.0% | |
| ATAATGCCAGAGCAAAAAAA+CGG | + | tig0004716:2228-2247 | Msa1341060:three_prime_UTR | 30.0% | |
| ! | TTATGGATTTAAGCATTGCT+GGG | - | tig0004716:2282-2301 | None:intergenic | 30.0% |
| ! | TTTATGGATTTAAGCATTGC+TGG | - | tig0004716:2283-2302 | None:intergenic | 30.0% |
| AAACTTCATCGTAAATCTGT+TGG | + | tig0004716:481-500 | Msa1341060:CDS | 30.0% | |
| AACTTCATCGTAAATCTGTT+GGG | + | tig0004716:482-501 | Msa1341060:CDS | 30.0% | |
| AAATGGAAGGAATCTGAATA+TGG | + | tig0004716:506-525 | Msa1341060:CDS | 30.0% | |
| ! | ATTTTGCAGTTTAGCTGATA+TGG | + | tig0004716:692-711 | Msa1341060:intron | 30.0% |
| !!! | AATCCAAGTTTTAGAGAACA+AGG | - | tig0004716:772-791 | None:intergenic | 30.0% |
| ! | TTTATGATGCTTTTAGCCAT+TGG | + | tig0004716:994-1013 | Msa1341060:intron | 30.0% |
| AGCAAAATATTAGCTAGACT+TGG | + | tig0004716:1052-1071 | Msa1341060:intron | 30.0% | |
| GCAAAATATTAGCTAGACTT+GGG | + | tig0004716:1053-1072 | Msa1341060:intron | 30.0% | |
| TATCTCATATATGCTTTGTC+AGG | + | tig0004716:1268-1287 | Msa1341060:intron | 30.0% | |
| AACTCATATGCTTCTTATTC+TGG | - | tig0004716:1300-1319 | None:intergenic | 30.0% | |
| ! | AGAATAAGAAGCATATGAGT+TGG | + | tig0004716:1299-1318 | Msa1341060:intron | 30.0% |
| ! | GTTCTGTTCCAAATTTTTCT+TGG | + | tig0004716:1371-1390 | Msa1341060:intron | 30.0% |
| TAAGGATCCCAAGAAAAATT+TGG | - | tig0004716:1382-1401 | None:intergenic | 30.0% | |
| CATAAAACAACACAGATAAG+TGG | - | tig0004716:1471-1490 | None:intergenic | 30.0% | |
| !! | GTACTTTGAAACATTTGAGA+AGG | + | tig0004716:1862-1881 | Msa1341060:CDS | 30.0% |
| AAACAAAAGTAATTGCTTGG+CGG | - | tig0004716:1926-1945 | None:intergenic | 30.0% | |
| CCAAAACAAAAGTAATTGCT+TGG | - | tig0004716:1929-1948 | None:intergenic | 30.0% | |
| !! | CCAAGCAATTACTTTTGTTT+TGG | + | tig0004716:1926-1945 | Msa1341060:three_prime_UTR | 30.0% |
| AAAACTACTCTTTGTCTTCA+AGG | - | tig0004716:1979-1998 | None:intergenic | 30.0% | |
| ATGGATAATTATACCACACA+CGG | - | tig0004716:2151-2170 | None:intergenic | 30.0% | |
| AGATAACAAAGCTCTTTCAA+AGG | - | tig0004716:2205-2224 | None:intergenic | 30.0% | |
| ATAATGCCAGAGCAAAAAAA+CGG | + | tig0004716:2228-2247 | Msa1341060:three_prime_UTR | 30.0% | |
| ! | TTATGGATTTAAGCATTGCT+GGG | - | tig0004716:2282-2301 | None:intergenic | 30.0% |
| ! | TTTATGGATTTAAGCATTGC+TGG | - | tig0004716:2283-2302 | None:intergenic | 30.0% |
| TGAAGTTTCCACTGTACTTA+CGG | - | tig0004716:469-488 | None:intergenic | 35.0% | |
| ACTTCATCGTAAATCTGTTG+GGG | + | tig0004716:483-502 | Msa1341060:CDS | 35.0% | |
| ATAGTATGCAATACCACCAA+CGG | - | tig0004716:549-568 | None:intergenic | 35.0% | |
| AGATAGAACAAAGCATGGAA+AGG | - | tig0004716:726-745 | None:intergenic | 35.0% | |
| ACACAAGATAGAACAAAGCA+TGG | - | tig0004716:731-750 | None:intergenic | 35.0% | |
| !! | GTTCTCTAAAACTTGGATTG+AGG | + | tig0004716:773-792 | Msa1341060:CDS | 35.0% |
| GCACAAATATTGGAGATAAC+AGG | - | tig0004716:931-950 | None:intergenic | 35.0% | |
| ! | GCATATATGAGATAACTTGC+AGG | - | tig0004716:1262-1281 | None:intergenic | 35.0% |
| !! | TGAGTTGGTTAGTTTAGAAC+AGG | + | tig0004716:1314-1333 | Msa1341060:intron | 35.0% |
| AGACATTGTTGCATACACTA+TGG | - | tig0004716:1436-1455 | None:intergenic | 35.0% | |
| !! | TTTGATGTTGGTTCAGAGTT+AGG | + | tig0004716:1496-1515 | Msa1341060:intron | 35.0% |
| GAATTTGCAGGAACAACAAA+TGG | + | tig0004716:1670-1689 | Msa1341060:intron | 35.0% | |
| CTTTCTGCAAGTTTGATTCA+CGG | - | tig0004716:1709-1728 | None:intergenic | 35.0% | |
| !!! | ACAGTGTTGGCAGATTTTAT+GGG | + | tig0004716:1788-1807 | Msa1341060:CDS | 35.0% |
| !! | CTGTCTCACTTTTAACCTAT+GGG | - | tig0004716:2111-2130 | None:intergenic | 35.0% |
| ! | AAAGTGAGACAGGTTAGTTA+TGG | + | tig0004716:2119-2138 | Msa1341060:three_prime_UTR | 35.0% |
| TAATGCCAGAGCAAAAAAAC+GGG | + | tig0004716:2229-2248 | Msa1341060:three_prime_UTR | 35.0% | |
| GCAAGTCAAAAGGCAATTTA+TGG | - | tig0004716:2299-2318 | None:intergenic | 35.0% | |
| TGAAGTTTCCACTGTACTTA+CGG | - | tig0004716:469-488 | None:intergenic | 35.0% | |
| ACTTCATCGTAAATCTGTTG+GGG | + | tig0004716:483-502 | Msa1341060:CDS | 35.0% | |
| ATAGTATGCAATACCACCAA+CGG | - | tig0004716:549-568 | None:intergenic | 35.0% | |
| AGATAGAACAAAGCATGGAA+AGG | - | tig0004716:726-745 | None:intergenic | 35.0% | |
| ACACAAGATAGAACAAAGCA+TGG | - | tig0004716:731-750 | None:intergenic | 35.0% | |
| !! | GTTCTCTAAAACTTGGATTG+AGG | + | tig0004716:773-792 | Msa1341060:CDS | 35.0% |
| GCACAAATATTGGAGATAAC+AGG | - | tig0004716:931-950 | None:intergenic | 35.0% | |
| ! | GCATATATGAGATAACTTGC+AGG | - | tig0004716:1262-1281 | None:intergenic | 35.0% |
| !! | TGAGTTGGTTAGTTTAGAAC+AGG | + | tig0004716:1314-1333 | Msa1341060:intron | 35.0% |
| AGACATTGTTGCATACACTA+TGG | - | tig0004716:1436-1455 | None:intergenic | 35.0% | |
| !! | TTTGATGTTGGTTCAGAGTT+AGG | + | tig0004716:1496-1515 | Msa1341060:intron | 35.0% |
| GAATTTGCAGGAACAACAAA+TGG | + | tig0004716:1670-1689 | Msa1341060:intron | 35.0% | |
| CTTTCTGCAAGTTTGATTCA+CGG | - | tig0004716:1709-1728 | None:intergenic | 35.0% | |
| !!! | ACAGTGTTGGCAGATTTTAT+GGG | + | tig0004716:1788-1807 | Msa1341060:CDS | 35.0% |
| !! | CTGTCTCACTTTTAACCTAT+GGG | - | tig0004716:2111-2130 | None:intergenic | 35.0% |
| ! | AAAGTGAGACAGGTTAGTTA+TGG | + | tig0004716:2119-2138 | Msa1341060:three_prime_UTR | 35.0% |
| TAATGCCAGAGCAAAAAAAC+GGG | + | tig0004716:2229-2248 | Msa1341060:three_prime_UTR | 35.0% | |
| GCAAGTCAAAAGGCAATTTA+TGG | - | tig0004716:2299-2318 | None:intergenic | 35.0% | |
| TCGTAAATCTGTTGGGGAAA+TGG | + | tig0004716:489-508 | Msa1341060:CDS | 40.0% | |
| AAATCTGTTGGGGAAATGGA+AGG | + | tig0004716:493-512 | Msa1341060:CDS | 40.0% | |
| TGGAAGGAATCTGAATATGG+AGG | + | tig0004716:509-528 | Msa1341060:CDS | 40.0% | |
| AAGGAATCTGAATATGGAGG+TGG | + | tig0004716:512-531 | Msa1341060:CDS | 40.0% | |
| TAGTATGCAATACCACCAAC+GGG | - | tig0004716:548-567 | None:intergenic | 40.0% | |
| ! | TTTGGAACATGTCTCTTACC+TGG | - | tig0004716:585-604 | None:intergenic | 40.0% |
| GAACAAAGCATGGAAAGGAT+TGG | - | tig0004716:721-740 | None:intergenic | 40.0% | |
| !! | GTGCCTTGTTCTCTAAAACT+TGG | + | tig0004716:766-785 | Msa1341060:CDS | 40.0% |
| AAAACTTGGATTGAGGTCTC+TGG | + | tig0004716:780-799 | Msa1341060:CDS | 40.0% | |
| GGATGTTGCAAAGCAATTGA+AGG | + | tig0004716:815-834 | Msa1341060:CDS | 40.0% | |
| AGATTAACCTGGTGATAAGC+AGG | + | tig0004716:967-986 | Msa1341060:intron | 40.0% | |
| GATTAACCTGGTGATAAGCA+GGG | + | tig0004716:968-987 | Msa1341060:intron | 40.0% | |
| CGTTAACAGGGAAATTCCAA+TGG | - | tig0004716:1013-1032 | None:intergenic | 40.0% | |
| TTACAGTCTGTCATTGTTGC+TGG | + | tig0004716:1223-1242 | Msa1341060:intron | 40.0% | |
| AACACAGATAAGTGGCATAG+AGG | - | tig0004716:1463-1482 | None:intergenic | 40.0% | |
| !! | TTTGAAACCGAGTTTGTTGC+TGG | + | tig0004716:1544-1563 | Msa1341060:intron | 40.0% |
| !! | TTGAAACCGAGTTTGTTGCT+GGG | + | tig0004716:1545-1564 | Msa1341060:intron | 40.0% |
| !!! | GACAGTGTTGGCAGATTTTA+TGG | + | tig0004716:1787-1806 | Msa1341060:CDS | 40.0% |
| ! | GCAGATTTTATGGGAGCAAT+AGG | + | tig0004716:1797-1816 | Msa1341060:CDS | 40.0% |
| TTTATGGGAGCAATAGGTTC+AGG | + | tig0004716:1803-1822 | Msa1341060:CDS | 40.0% | |
| TTATGGGAGCAATAGGTTCA+GGG | + | tig0004716:1804-1823 | Msa1341060:CDS | 40.0% | |
| ! | GGATCTGAAGTACAGTACAA+GGG | - | tig0004716:1958-1977 | None:intergenic | 40.0% |
| ! | AGGATCTGAAGTACAGTACA+AGG | - | tig0004716:1959-1978 | None:intergenic | 40.0% |
| GATCAGACTTCATGTGTTCA+AGG | - | tig0004716:2089-2108 | None:intergenic | 40.0% | |
| !! | CCTGTCTCACTTTTAACCTA+TGG | - | tig0004716:2112-2131 | None:intergenic | 40.0% |
| CCATAGGTTAAAAGTGAGAC+AGG | + | tig0004716:2109-2128 | Msa1341060:three_prime_UTR | 40.0% | |
| ! | ATTATCCATGAGTGTTGCCA+TGG | + | tig0004716:2162-2181 | Msa1341060:three_prime_UTR | 40.0% |
| TCATGTGAAAACTACCACCA+TGG | - | tig0004716:2182-2201 | None:intergenic | 40.0% | |
| AATGCCAGAGCAAAAAAACG+GGG | + | tig0004716:2230-2249 | Msa1341060:three_prime_UTR | 40.0% | |
| TCGTAAATCTGTTGGGGAAA+TGG | + | tig0004716:489-508 | Msa1341060:CDS | 40.0% | |
| AAATCTGTTGGGGAAATGGA+AGG | + | tig0004716:493-512 | Msa1341060:CDS | 40.0% | |
| TGGAAGGAATCTGAATATGG+AGG | + | tig0004716:509-528 | Msa1341060:CDS | 40.0% | |
| AAGGAATCTGAATATGGAGG+TGG | + | tig0004716:512-531 | Msa1341060:CDS | 40.0% | |
| TAGTATGCAATACCACCAAC+GGG | - | tig0004716:548-567 | None:intergenic | 40.0% | |
| ! | TTTGGAACATGTCTCTTACC+TGG | - | tig0004716:585-604 | None:intergenic | 40.0% |
| GAACAAAGCATGGAAAGGAT+TGG | - | tig0004716:721-740 | None:intergenic | 40.0% | |
| !! | GTGCCTTGTTCTCTAAAACT+TGG | + | tig0004716:766-785 | Msa1341060:CDS | 40.0% |
| AAAACTTGGATTGAGGTCTC+TGG | + | tig0004716:780-799 | Msa1341060:CDS | 40.0% | |
| GGATGTTGCAAAGCAATTGA+AGG | + | tig0004716:815-834 | Msa1341060:CDS | 40.0% | |
| AGATTAACCTGGTGATAAGC+AGG | + | tig0004716:967-986 | Msa1341060:intron | 40.0% | |
| GATTAACCTGGTGATAAGCA+GGG | + | tig0004716:968-987 | Msa1341060:intron | 40.0% | |
| CGTTAACAGGGAAATTCCAA+TGG | - | tig0004716:1013-1032 | None:intergenic | 40.0% | |
| TTACAGTCTGTCATTGTTGC+TGG | + | tig0004716:1223-1242 | Msa1341060:intron | 40.0% | |
| AACACAGATAAGTGGCATAG+AGG | - | tig0004716:1463-1482 | None:intergenic | 40.0% | |
| !! | TTTGAAACCGAGTTTGTTGC+TGG | + | tig0004716:1544-1563 | Msa1341060:intron | 40.0% |
| !! | TTGAAACCGAGTTTGTTGCT+GGG | + | tig0004716:1545-1564 | Msa1341060:intron | 40.0% |
| !!! | GACAGTGTTGGCAGATTTTA+TGG | + | tig0004716:1787-1806 | Msa1341060:CDS | 40.0% |
| ! | GCAGATTTTATGGGAGCAAT+AGG | + | tig0004716:1797-1816 | Msa1341060:CDS | 40.0% |
| TTTATGGGAGCAATAGGTTC+AGG | + | tig0004716:1803-1822 | Msa1341060:CDS | 40.0% | |
| TTATGGGAGCAATAGGTTCA+GGG | + | tig0004716:1804-1823 | Msa1341060:CDS | 40.0% | |
| ! | GGATCTGAAGTACAGTACAA+GGG | - | tig0004716:1958-1977 | None:intergenic | 40.0% |
| ! | AGGATCTGAAGTACAGTACA+AGG | - | tig0004716:1959-1978 | None:intergenic | 40.0% |
| GATCAGACTTCATGTGTTCA+AGG | - | tig0004716:2089-2108 | None:intergenic | 40.0% | |
| !! | CCTGTCTCACTTTTAACCTA+TGG | - | tig0004716:2112-2131 | None:intergenic | 40.0% |
| CCATAGGTTAAAAGTGAGAC+AGG | + | tig0004716:2109-2128 | Msa1341060:three_prime_UTR | 40.0% | |
| ! | ATTATCCATGAGTGTTGCCA+TGG | + | tig0004716:2162-2181 | Msa1341060:three_prime_UTR | 40.0% |
| TCATGTGAAAACTACCACCA+TGG | - | tig0004716:2182-2201 | None:intergenic | 40.0% | |
| AATGCCAGAGCAAAAAAACG+GGG | + | tig0004716:2230-2249 | Msa1341060:three_prime_UTR | 40.0% | |
| AGTTTCCACTGTACTTACGG+TGG | - | tig0004716:466-485 | None:intergenic | 45.0% | |
| GAACATGTCTCTTACCTGGA+AGG | - | tig0004716:581-600 | None:intergenic | 45.0% | |
| AAATGACCCTGCTTATCACC+AGG | - | tig0004716:977-996 | None:intergenic | 45.0% | |
| AAGGCCAGTATACTAGTAGC+CGG | + | tig0004716:1155-1174 | Msa1341060:intron | 45.0% | |
| AGAGTTCCCAGCAACAAACT+CGG | - | tig0004716:1554-1573 | None:intergenic | 45.0% | |
| ! | GAACAACAAATGGTGATGCC+TGG | + | tig0004716:1680-1699 | Msa1341060:CDS | 45.0% |
| AAGTTTGATTCACGGTGTCC+AGG | - | tig0004716:1701-1720 | None:intergenic | 45.0% | |
| !! | GCATTCGGAGGCATTTGTAT+TGG | + | tig0004716:1758-1777 | Msa1341060:CDS | 45.0% |
| ! | TATTGGTGCTCTGACAGTGT+TGG | + | tig0004716:1775-1794 | Msa1341060:CDS | 45.0% |
| AAGGAAAAAGCCAGTGAGCT+TGG | + | tig0004716:1881-1900 | Msa1341060:CDS | 45.0% | |
| CACATGAAGTCTGATCCCAT+AGG | + | tig0004716:2093-2112 | Msa1341060:three_prime_UTR | 45.0% | |
| ATGCCAGAGCAAAAAAACGG+GGG | + | tig0004716:2231-2250 | Msa1341060:three_prime_UTR | 45.0% | |
| AGTTTCCACTGTACTTACGG+TGG | - | tig0004716:466-485 | None:intergenic | 45.0% | |
| GAACATGTCTCTTACCTGGA+AGG | - | tig0004716:581-600 | None:intergenic | 45.0% | |
| AAATGACCCTGCTTATCACC+AGG | - | tig0004716:977-996 | None:intergenic | 45.0% | |
| AAGGCCAGTATACTAGTAGC+CGG | + | tig0004716:1155-1174 | Msa1341060:intron | 45.0% | |
| AGAGTTCCCAGCAACAAACT+CGG | - | tig0004716:1554-1573 | None:intergenic | 45.0% | |
| ! | GAACAACAAATGGTGATGCC+TGG | + | tig0004716:1680-1699 | Msa1341060:CDS | 45.0% |
| AAGTTTGATTCACGGTGTCC+AGG | - | tig0004716:1701-1720 | None:intergenic | 45.0% | |
| !! | GCATTCGGAGGCATTTGTAT+TGG | + | tig0004716:1758-1777 | Msa1341060:CDS | 45.0% |
| ! | TATTGGTGCTCTGACAGTGT+TGG | + | tig0004716:1775-1794 | Msa1341060:CDS | 45.0% |
| AAGGAAAAAGCCAGTGAGCT+TGG | + | tig0004716:1881-1900 | Msa1341060:CDS | 45.0% | |
| CACATGAAGTCTGATCCCAT+AGG | + | tig0004716:2093-2112 | Msa1341060:three_prime_UTR | 45.0% | |
| ATGCCAGAGCAAAAAAACGG+GGG | + | tig0004716:2231-2250 | Msa1341060:three_prime_UTR | 45.0% | |
| CTTCTCCACCGTAAGTACAG+TGG | + | tig0004716:458-477 | Msa1341060:CDS | 50.0% | |
| ACTATATCACTGCGCCTTCC+AGG | + | tig0004716:564-583 | Msa1341060:CDS | 50.0% | |
| ! | AGGTCTCTGGTTCATCTGCT+AGG | + | tig0004716:793-812 | Msa1341060:CDS | 50.0% |
| ! | GGTCTCTGGTTCATCTGCTA+GGG | + | tig0004716:794-813 | Msa1341060:CDS | 50.0% |
| AGGCCAGTATACTAGTAGCC+GGG | + | tig0004716:1156-1175 | Msa1341060:intron | 50.0% | |
| AACTAGACATGCACCTCCAG+CGG | - | tig0004716:1205-1224 | None:intergenic | 50.0% | |
| GAGCAATAGGTTCAGGGACA+GGG | + | tig0004716:1810-1829 | Msa1341060:CDS | 50.0% | |
| ACCAAAGAAGCCAAGCTCAC+TGG | - | tig0004716:1894-1913 | None:intergenic | 50.0% | |
| ! | ATCCATGAGTGTTGCCATGG+TGG | + | tig0004716:2165-2184 | Msa1341060:three_prime_UTR | 50.0% |
| TACCACCATGGCAACACTCA+TGG | - | tig0004716:2170-2189 | None:intergenic | 50.0% | |
| !!! | AGACCCCCGTTTTTTTGCTC+TGG | - | tig0004716:2237-2256 | None:intergenic | 50.0% |
| CTTCTCCACCGTAAGTACAG+TGG | + | tig0004716:458-477 | Msa1341060:CDS | 50.0% | |
| ACTATATCACTGCGCCTTCC+AGG | + | tig0004716:564-583 | Msa1341060:CDS | 50.0% | |
| ! | AGGTCTCTGGTTCATCTGCT+AGG | + | tig0004716:793-812 | Msa1341060:CDS | 50.0% |
| ! | GGTCTCTGGTTCATCTGCTA+GGG | + | tig0004716:794-813 | Msa1341060:CDS | 50.0% |
| AGGCCAGTATACTAGTAGCC+GGG | + | tig0004716:1156-1175 | Msa1341060:intron | 50.0% | |
| AACTAGACATGCACCTCCAG+CGG | - | tig0004716:1205-1224 | None:intergenic | 50.0% | |
| GAGCAATAGGTTCAGGGACA+GGG | + | tig0004716:1810-1829 | Msa1341060:CDS | 50.0% | |
| ACCAAAGAAGCCAAGCTCAC+TGG | - | tig0004716:1894-1913 | None:intergenic | 50.0% | |
| ! | ATCCATGAGTGTTGCCATGG+TGG | + | tig0004716:2165-2184 | Msa1341060:three_prime_UTR | 50.0% |
| TACCACCATGGCAACACTCA+TGG | - | tig0004716:2170-2189 | None:intergenic | 50.0% | |
| !!! | AGACCCCCGTTTTTTTGCTC+TGG | - | tig0004716:2237-2256 | None:intergenic | 50.0% |
| GGTGGTCACTCAATTCCCGT+TGG | + | tig0004716:530-549 | Msa1341060:CDS | 55.0% | |
| GGTCACTCAATTCCCGTTGG+TGG | + | tig0004716:533-552 | Msa1341060:CDS | 55.0% | |
| TGGCCCGGCTACTAGTATAC+TGG | - | tig0004716:1162-1181 | None:intergenic | 55.0% | |
| ACTAGACATGCACCTCCAGC+GGG | - | tig0004716:1204-1223 | None:intergenic | 55.0% | |
| CTGCAGCAGTGGGGATGTAT+CGG | - | tig0004716:1739-1758 | None:intergenic | 55.0% | |
| ATCCCCACTGCTGCAGCATT+CGG | + | tig0004716:1743-1762 | Msa1341060:CDS | 55.0% | |
| GGAGCAATAGGTTCAGGGAC+AGG | + | tig0004716:1809-1828 | Msa1341060:CDS | 55.0% | |
| GCCAGTGAGCTTGGCTTCTT+TGG | + | tig0004716:1890-1909 | Msa1341060:CDS | 55.0% | |
| GTTATGGAAGCAGCCGTGTG+TGG | + | tig0004716:2135-2154 | Msa1341060:three_prime_UTR | 55.0% | |
| GGTGGTCACTCAATTCCCGT+TGG | + | tig0004716:530-549 | Msa1341060:CDS | 55.0% | |
| GGTCACTCAATTCCCGTTGG+TGG | + | tig0004716:533-552 | Msa1341060:CDS | 55.0% | |
| TGGCCCGGCTACTAGTATAC+TGG | - | tig0004716:1162-1181 | None:intergenic | 55.0% | |
| ACTAGACATGCACCTCCAGC+GGG | - | tig0004716:1204-1223 | None:intergenic | 55.0% | |
| CTGCAGCAGTGGGGATGTAT+CGG | - | tig0004716:1739-1758 | None:intergenic | 55.0% | |
| ATCCCCACTGCTGCAGCATT+CGG | + | tig0004716:1743-1762 | Msa1341060:CDS | 55.0% | |
| GGAGCAATAGGTTCAGGGAC+AGG | + | tig0004716:1809-1828 | Msa1341060:CDS | 55.0% | |
| GCCAGTGAGCTTGGCTTCTT+TGG | + | tig0004716:1890-1909 | Msa1341060:CDS | 55.0% | |
| GTTATGGAAGCAGCCGTGTG+TGG | + | tig0004716:2135-2154 | Msa1341060:three_prime_UTR | 55.0% | |
| CTCCGAATGCTGCAGCAGTG+GGG | - | tig0004716:1748-1767 | None:intergenic | 60.0% | |
| CCTCCGAATGCTGCAGCAGT+GGG | - | tig0004716:1749-1768 | None:intergenic | 60.0% | |
| CTCCGAATGCTGCAGCAGTG+GGG | - | tig0004716:1748-1767 | None:intergenic | 60.0% | |
| CCTCCGAATGCTGCAGCAGT+GGG | - | tig0004716:1749-1768 | None:intergenic | 60.0% | |
| ACTAGTAGCCGGGCCAGTGC+TGG | + | tig0004716:1166-1185 | Msa1341060:intron | 65.0% | |
| CTAGTAGCCGGGCCAGTGCT+GGG | + | tig0004716:1167-1186 | Msa1341060:intron | 65.0% | |
| !! | TCAATGGCCCAGCACTGGCC+CGG | - | tig0004716:1177-1196 | None:intergenic | 65.0% |
| ! | GCCAGTGCTGGGCCATTGAC+TGG | + | tig0004716:1178-1197 | Msa1341060:intron | 65.0% |
| GCCAGTCAATGGCCCAGCAC+TGG | - | tig0004716:1182-1201 | None:intergenic | 65.0% | |
| ACCTCCAGCGGGCCAGTCAA+TGG | - | tig0004716:1193-1212 | None:intergenic | 65.0% | |
| CCCACTGCTGCAGCATTCGG+AGG | + | tig0004716:1746-1765 | Msa1341060:CDS | 65.0% | |
| GCCTCCGAATGCTGCAGCAG+TGG | - | tig0004716:1750-1769 | None:intergenic | 65.0% | |
| ACTAGTAGCCGGGCCAGTGC+TGG | + | tig0004716:1166-1185 | Msa1341060:intron | 65.0% | |
| CTAGTAGCCGGGCCAGTGCT+GGG | + | tig0004716:1167-1186 | Msa1341060:intron | 65.0% | |
| !! | TCAATGGCCCAGCACTGGCC+CGG | - | tig0004716:1177-1196 | None:intergenic | 65.0% |
| ! | GCCAGTGCTGGGCCATTGAC+TGG | + | tig0004716:1178-1197 | Msa1341060:intron | 65.0% |
| GCCAGTCAATGGCCCAGCAC+TGG | - | tig0004716:1182-1201 | None:intergenic | 65.0% | |
| ACCTCCAGCGGGCCAGTCAA+TGG | - | tig0004716:1193-1212 | None:intergenic | 65.0% | |
| CCCACTGCTGCAGCATTCGG+AGG | + | tig0004716:1746-1765 | Msa1341060:CDS | 65.0% | |
| GCCTCCGAATGCTGCAGCAG+TGG | - | tig0004716:1750-1769 | None:intergenic | 65.0% | |
| ! | TGGGCCATTGACTGGCCCGC+TGG | + | tig0004716:1186-1205 | Msa1341060:intron | 70.0% |
| ! | GCCATTGACTGGCCCGCTGG+AGG | + | tig0004716:1189-1208 | Msa1341060:intron | 70.0% |
| ! | TGGGCCATTGACTGGCCCGC+TGG | + | tig0004716:1186-1205 | Msa1341060:intron | 70.0% |
| ! | GCCATTGACTGGCCCGCTGG+AGG | + | tig0004716:1189-1208 | Msa1341060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004716 | gene | 458 | 2410 | 458 | ID=Msa1341060;Name=Msa1341060 |
| tig0004716 | mRNA | 458 | 2410 | 458 | ID=Msa1341060-mRNA-1;Parent=Msa1341060;Name=Msa1341060-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.66|1|1|1|3|491|167 |
| tig0004716 | exon | 458 | 585 | 458 | ID=Msa1341060-mRNA-1:exon:2962;Parent=Msa1341060-mRNA-1 |
| tig0004716 | exon | 701 | 836 | 701 | ID=Msa1341060-mRNA-1:exon:2963;Parent=Msa1341060-mRNA-1 |
| tig0004716 | exon | 1680 | 2410 | 1680 | ID=Msa1341060-mRNA-1:exon:2964;Parent=Msa1341060-mRNA-1 |
| tig0004716 | CDS | 458 | 585 | 458 | ID=Msa1341060-mRNA-1:cds;Parent=Msa1341060-mRNA-1 |
| tig0004716 | CDS | 701 | 836 | 701 | ID=Msa1341060-mRNA-1:cds;Parent=Msa1341060-mRNA-1 |
| tig0004716 | CDS | 1680 | 1919 | 1680 | ID=Msa1341060-mRNA-1:cds;Parent=Msa1341060-mRNA-1 |
| tig0004716 | three_prime_UTR | 1920 | 2410 | 1920 | ID=Msa1341060-mRNA-1:three_prime_utr;Parent=Msa1341060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
