Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037720 | XP_003626557.1 | 94.118 | 340 | 20 | 0 | 1 | 340 | 1 | 340 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037720 | sp|Q7PCC4|ANRCH_VITVI | 33.234 | 337 | 208 | 9 | 8 | 340 | 13 | 336 | 3.66e-55 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037720 | G7L425 | 94.118 | 340 | 20 | 0 | 1 | 340 | 1 | 340 | 0.0 | 668 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0437340 | Msa1037720 | 0.884114 | 2.527451e-71 | -8.615850e-47 |
| Msa1037720 | Msa1130340 | 0.861415 | 1.042937e-63 | -8.615850e-47 |
| Msa1037720 | Msa1130640 | 0.874866 | 4.831926e-68 | -8.615850e-47 |
| Msa1037720 | Msa1427790 | 0.861568 | 9.364365e-64 | -8.615850e-47 |
| Msa1037720 | Msa1441210 | 0.855627 | 5.556916e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037720 | MtrunA17_Chr7g0275521 | 94.118 | 340 | 20 | 0 | 1 | 340 | 1 | 340 | 0.0 | 668 |
| Msa1037720 | MtrunA17_Chr2g0282001 | 59.942 | 342 | 132 | 4 | 1 | 340 | 1 | 339 | 1.93e-145 | 414 |
| Msa1037720 | MtrunA17_Chr2g0281991 | 58.480 | 342 | 137 | 4 | 1 | 340 | 2 | 340 | 5.79e-142 | 405 |
| Msa1037720 | MtrunA17_Chr2g0282011 | 58.065 | 341 | 138 | 4 | 1 | 339 | 2 | 339 | 1.09e-132 | 382 |
| Msa1037720 | MtrunA17_Chr1g0155411 | 32.738 | 336 | 206 | 7 | 7 | 340 | 8 | 325 | 3.82e-52 | 175 |
| Msa1037720 | MtrunA17_Chr7g0245731 | 33.235 | 340 | 200 | 9 | 2 | 335 | 53 | 371 | 3.51e-51 | 174 |
| Msa1037720 | MtrunA17_Chr7g0245741 | 33.333 | 345 | 203 | 8 | 2 | 340 | 3 | 326 | 8.16e-51 | 171 |
| Msa1037720 | MtrunA17_Chr4g0048961 | 32.941 | 340 | 205 | 9 | 6 | 338 | 13 | 336 | 1.16e-50 | 171 |
| Msa1037720 | MtrunA17_Chr7g0245691 | 34.593 | 344 | 204 | 10 | 2 | 340 | 3 | 330 | 7.06e-49 | 167 |
| Msa1037720 | MtrunA17_Chr7g0245671 | 33.333 | 339 | 206 | 9 | 6 | 340 | 7 | 329 | 2.92e-48 | 165 |
| Msa1037720 | MtrunA17_Chr4g0042101 | 32.749 | 342 | 212 | 10 | 6 | 340 | 23 | 353 | 6.00e-48 | 165 |
| Msa1037720 | MtrunA17_Chr7g0245641 | 33.908 | 348 | 200 | 10 | 2 | 340 | 40 | 366 | 2.78e-47 | 163 |
| Msa1037720 | MtrunA17_Chr1g0155431 | 31.024 | 332 | 205 | 8 | 7 | 332 | 8 | 321 | 8.01e-47 | 161 |
| Msa1037720 | MtrunA17_Chr7g0245631 | 31.195 | 343 | 213 | 9 | 2 | 340 | 3 | 326 | 1.38e-44 | 155 |
| Msa1037720 | MtrunA17_Chr4g0010991 | 31.487 | 343 | 205 | 10 | 7 | 340 | 8 | 329 | 1.03e-41 | 148 |
| Msa1037720 | MtrunA17_Chr7g0245711 | 30.976 | 297 | 179 | 8 | 44 | 335 | 8 | 283 | 8.25e-37 | 134 |
| Msa1037720 | MtrunA17_Chr2g0331211 | 31.378 | 341 | 203 | 13 | 6 | 340 | 4 | 319 | 4.93e-36 | 133 |
| Msa1037720 | MtrunA17_Chr3g0106111 | 29.794 | 339 | 205 | 11 | 7 | 338 | 5 | 317 | 1.44e-32 | 123 |
| Msa1037720 | MtrunA17_Chr3g0077231 | 31.058 | 293 | 182 | 8 | 7 | 299 | 6 | 278 | 5.50e-31 | 119 |
| Msa1037720 | MtrunA17_Chr5g0431311 | 29.254 | 335 | 212 | 10 | 7 | 338 | 5 | 317 | 1.16e-30 | 118 |
| Msa1037720 | MtrunA17_Chr3g0077221 | 29.932 | 294 | 184 | 8 | 7 | 299 | 10 | 282 | 2.66e-30 | 117 |
| Msa1037720 | MtrunA17_Chr8g0364051 | 30.667 | 300 | 173 | 10 | 7 | 299 | 8 | 279 | 4.89e-30 | 116 |
| Msa1037720 | MtrunA17_Chr4g0039321 | 30.693 | 303 | 175 | 11 | 7 | 301 | 9 | 284 | 1.55e-29 | 115 |
| Msa1037720 | MtrunA17_Chr4g0002661 | 29.538 | 325 | 203 | 11 | 6 | 328 | 12 | 312 | 5.90e-29 | 114 |
| Msa1037720 | MtrunA17_Chr5g0423551 | 27.778 | 342 | 219 | 12 | 4 | 340 | 1 | 319 | 2.24e-28 | 112 |
| Msa1037720 | MtrunA17_Chr8g0363831 | 31.438 | 299 | 172 | 11 | 7 | 299 | 9 | 280 | 4.24e-28 | 111 |
| Msa1037720 | MtrunA17_Chr4g0039311 | 29.730 | 296 | 182 | 11 | 7 | 299 | 11 | 283 | 7.20e-28 | 110 |
| Msa1037720 | MtrunA17_Chr4g0001321 | 27.859 | 341 | 208 | 14 | 7 | 340 | 17 | 326 | 7.35e-28 | 111 |
| Msa1037720 | MtrunA17_Chr2g0291541 | 30.341 | 323 | 189 | 14 | 7 | 319 | 10 | 306 | 7.74e-28 | 111 |
| Msa1037720 | MtrunA17_Chr2g0333781 | 27.848 | 316 | 199 | 10 | 7 | 319 | 20 | 309 | 4.39e-27 | 109 |
| Msa1037720 | MtrunA17_Chr4g0002961 | 28.763 | 299 | 182 | 10 | 6 | 299 | 12 | 284 | 1.02e-24 | 102 |
| Msa1037720 | MtrunA17_Chr5g0411071 | 22.826 | 276 | 179 | 9 | 7 | 281 | 12 | 254 | 6.85e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037720 | AT4G27250.1 | 33.731 | 335 | 200 | 8 | 8 | 331 | 14 | 337 | 1.75e-50 | 172 |
| Msa1037720 | AT4G27250.2 | 33.433 | 335 | 191 | 9 | 8 | 331 | 14 | 327 | 9.61e-49 | 167 |
| Msa1037720 | AT5G42800.1 | 30.357 | 336 | 214 | 7 | 7 | 340 | 8 | 325 | 2.40e-44 | 156 |
| Msa1037720 | AT1G61720.1 | 31.751 | 337 | 213 | 9 | 6 | 338 | 12 | 335 | 5.72e-44 | 154 |
| Msa1037720 | AT2G45400.1 | 31.563 | 339 | 213 | 8 | 7 | 340 | 40 | 364 | 2.43e-41 | 148 |
| Msa1037720 | AT1G09500.3 | 33.559 | 295 | 171 | 9 | 7 | 300 | 8 | 278 | 2.68e-38 | 138 |
| Msa1037720 | AT1G09510.1 | 32.759 | 290 | 175 | 6 | 7 | 296 | 8 | 277 | 3.17e-38 | 139 |
| Msa1037720 | AT1G09500.1 | 32.993 | 294 | 176 | 8 | 7 | 299 | 8 | 281 | 1.29e-37 | 137 |
| Msa1037720 | AT4G35420.1 | 28.280 | 343 | 218 | 11 | 2 | 340 | 3 | 321 | 1.54e-37 | 137 |
| Msa1037720 | AT2G45400.2 | 32.292 | 288 | 178 | 7 | 7 | 291 | 40 | 313 | 2.77e-36 | 134 |
| Msa1037720 | AT1G09490.1 | 31.724 | 290 | 172 | 8 | 7 | 293 | 8 | 274 | 1.18e-35 | 132 |
| Msa1037720 | AT1G09480.2 | 32.056 | 287 | 175 | 7 | 7 | 293 | 8 | 274 | 3.90e-35 | 130 |
| Msa1037720 | AT1G09480.1 | 32.056 | 287 | 175 | 7 | 7 | 293 | 55 | 321 | 8.00e-35 | 131 |
| Msa1037720 | AT1G66800.1 | 33.564 | 289 | 160 | 11 | 7 | 291 | 8 | 268 | 2.67e-34 | 128 |
| Msa1037720 | AT5G19440.1 | 32.215 | 298 | 174 | 9 | 7 | 300 | 10 | 283 | 1.33e-33 | 127 |
| Msa1037720 | AT1G51410.1 | 31.633 | 294 | 181 | 7 | 7 | 300 | 9 | 282 | 1.18e-32 | 124 |
| Msa1037720 | AT2G45400.3 | 29.231 | 325 | 207 | 9 | 19 | 340 | 3 | 307 | 7.27e-30 | 116 |
| Msa1037720 | AT2G33590.1 | 29.552 | 335 | 191 | 12 | 6 | 328 | 8 | 309 | 2.06e-28 | 112 |
| Msa1037720 | AT1G25460.1 | 28.779 | 344 | 213 | 11 | 4 | 340 | 1 | 319 | 4.46e-28 | 111 |
| Msa1037720 | AT1G68540.1 | 28.448 | 348 | 211 | 12 | 4 | 340 | 1 | 321 | 1.29e-27 | 110 |
| Msa1037720 | AT2G02400.1 | 29.210 | 291 | 180 | 10 | 7 | 295 | 6 | 272 | 1.98e-27 | 110 |
| Msa1037720 | AT1G80820.1 | 29.204 | 339 | 206 | 12 | 7 | 340 | 8 | 317 | 3.24e-27 | 109 |
| Msa1037720 | AT2G45400.4 | 33.945 | 218 | 137 | 4 | 7 | 222 | 40 | 252 | 3.53e-27 | 107 |
| Msa1037720 | AT5G58490.1 | 30.405 | 296 | 168 | 11 | 7 | 293 | 9 | 275 | 5.15e-27 | 108 |
| Msa1037720 | AT1G15950.3 | 29.794 | 339 | 204 | 13 | 7 | 340 | 13 | 322 | 5.22e-27 | 109 |
| Msa1037720 | AT1G15950.1 | 29.794 | 339 | 204 | 13 | 7 | 340 | 13 | 322 | 5.22e-27 | 109 |
| Msa1037720 | AT1G76470.1 | 28.986 | 345 | 217 | 13 | 1 | 340 | 1 | 322 | 1.90e-26 | 107 |
| Msa1037720 | AT1G15950.2 | 28.783 | 337 | 207 | 12 | 7 | 338 | 13 | 321 | 2.79e-26 | 107 |
| Msa1037720 | AT1G15950.4 | 29.831 | 295 | 177 | 10 | 7 | 299 | 13 | 279 | 6.38e-26 | 105 |
| Msa1037720 | AT1G15950.5 | 29.932 | 294 | 176 | 10 | 7 | 298 | 13 | 278 | 7.05e-26 | 105 |
| Msa1037720 | AT1G15950.6 | 30.104 | 289 | 172 | 10 | 7 | 293 | 13 | 273 | 1.20e-25 | 104 |
| Msa1037720 | AT1G80820.2 | 29.412 | 289 | 174 | 9 | 7 | 293 | 8 | 268 | 2.45e-25 | 103 |
| Msa1037720 | AT2G33600.1 | 29.464 | 336 | 190 | 12 | 6 | 328 | 8 | 309 | 1.19e-23 | 99.8 |
| Msa1037720 | AT1G09500.2 | 29.278 | 263 | 161 | 9 | 39 | 300 | 6 | 244 | 3.07e-21 | 92.4 |
| Msa1037720 | AT1G09490.2 | 26.744 | 258 | 163 | 8 | 39 | 293 | 9 | 243 | 4.09e-19 | 86.7 |
| Msa1037720 | AT4G33360.2 | 24.497 | 298 | 174 | 12 | 6 | 293 | 14 | 270 | 1.45e-13 | 70.9 |
| Msa1037720 | AT4G33360.3 | 24.497 | 298 | 174 | 12 | 6 | 293 | 2 | 258 | 1.46e-13 | 70.9 |
| Msa1037720 | AT4G33360.1 | 24.497 | 298 | 174 | 12 | 6 | 293 | 14 | 270 | 1.65e-13 | 70.9 |
| Msa1037720 | AT2G23910.2 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 8.84e-13 | 68.2 |
| Msa1037720 | AT2G23910.3 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 1.11e-12 | 67.8 |
| Msa1037720 | AT2G23910.1 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 1.18e-12 | 68.2 |
Find 75 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATGACGCTAAGATGATTT+TGG | 0.198390 | 7_1:-74428704 | Msa1037720:CDS |
| TGACTTTGAGGCTGCAATTA+AGG | 0.212022 | 7_1:-74430619 | Msa1037720:CDS |
| CCCCACTTCATATCCTTCTT+TGG | 0.223576 | 7_1:+74428763 | None:intergenic |
| TCTTGATTAACAGTGAATTC+TGG | 0.267622 | 7_1:+74429174 | None:intergenic |
| GTACCATGATGCTTATCTTA+AGG | 0.339878 | 7_1:-74429763 | Msa1037720:intron |
| ATTACTGAAGCATCGCTTGC+TGG | 0.342941 | 7_1:-74429951 | Msa1037720:CDS |
| GACTTTGAGGCTGCAATTAA+GGG | 0.352832 | 7_1:-74430618 | Msa1037720:CDS |
| GTATGCGTCACAGGTGCTTC+TGG | 0.352861 | 7_1:-74430916 | Msa1037720:CDS |
| TTACAACTCAATTGACTTTG+AGG | 0.381158 | 7_1:-74430631 | Msa1037720:CDS |
| GACTGGTTTCAATGATATAA+TGG | 0.390602 | 7_1:-74429829 | Msa1037720:CDS |
| TAACCTGAGATGCGGGTTCA+TGG | 0.394734 | 7_1:+74430559 | None:intergenic |
| CTTTACAGAGGATGAGTCTA+AGG | 0.400084 | 7_1:-74430715 | Msa1037720:intron |
| TCCACAATCACAAGACAAAC+TGG | 0.405298 | 7_1:-74430673 | Msa1037720:CDS |
| CCAGTCCCATCATCTTTCAT+TGG | 0.410585 | 7_1:+74429846 | None:intergenic |
| AGTCTCCTATGTGGGGTTGT+AGG | 0.417874 | 7_1:-74429453 | Msa1037720:CDS |
| ATATAATGGATGAAACTTGC+TGG | 0.423061 | 7_1:-74429815 | Msa1037720:CDS |
| GATCCATGAACCCGCATCTC+AGG | 0.456989 | 7_1:-74430562 | Msa1037720:intron |
| GCTTCTCCAATGAAAGATGA+TGG | 0.461395 | 7_1:-74429852 | Msa1037720:CDS |
| CAATGAAAATGGTGGAGGGT+TGG | 0.467224 | 7_1:-74429484 | Msa1037720:CDS |
| ATGTGTAAGGTATGCGTCAC+AGG | 0.467565 | 7_1:-74430925 | Msa1037720:CDS |
| AGCTGTGGGAACAATGAAAA+TGG | 0.468232 | 7_1:-74429495 | Msa1037720:CDS |
| TGCAAATGGACGCAAATCAC+TGG | 0.474718 | 7_1:-74429364 | Msa1037720:CDS |
| TGAAAATGGTGGAGGGTTGG+AGG | 0.475120 | 7_1:-74429481 | Msa1037720:CDS |
| CATATCACAGAAAATGCAAA+TGG | 0.475143 | 7_1:-74429378 | Msa1037720:CDS |
| AGGTGGTAAGTCTCCTATGT+GGG | 0.493459 | 7_1:-74429461 | Msa1037720:CDS |
| ACCAGTTTGTCTTGTGATTG+TGG | 0.493902 | 7_1:+74430672 | None:intergenic |
| GAAAGTACTTCATCAATCAA+TGG | 0.516637 | 7_1:-74429264 | Msa1037720:CDS |
| CACATTACAGATATGCAGAT+AGG | 0.522186 | 7_1:-74428786 | Msa1037720:intron |
| TGTCAAATGTGCTAGAAGAA+TGG | 0.523502 | 7_1:-74428674 | Msa1037720:CDS |
| TTACTGAAGCATCGCTTGCT+GGG | 0.524780 | 7_1:-74429950 | Msa1037720:CDS |
| AGATGCGGGTTCATGGATCA+AGG | 0.529187 | 7_1:+74430566 | None:intergenic |
| GATACAAATTGCAACGCTAC+CGG | 0.530650 | 7_1:+74429404 | None:intergenic |
| GTCAAATGTGCTAGAAGAAT+GGG | 0.531939 | 7_1:-74428673 | Msa1037720:CDS |
| GGTGATGGAAGCAATGTGTA+AGG | 0.539971 | 7_1:-74430938 | Msa1037720:exon |
| TATAATTTAACCTGAGATGC+GGG | 0.540168 | 7_1:+74430552 | None:intergenic |
| ATATGCTAAAGAATCGTTGA+GGG | 0.549055 | 7_1:+74429788 | None:intergenic |
| AAATGGTGGAGGGTTGGAGG+TGG | 0.552531 | 7_1:-74429478 | Msa1037720:CDS |
| TGCAACGCTACCGGGTGTGA+AGG | 0.555436 | 7_1:+74429413 | None:intergenic |
| GAGGTGGTAAGTCTCCTATG+TGG | 0.557624 | 7_1:-74429462 | Msa1037720:CDS |
| ATACAAATTGCAACGCTACC+GGG | 0.561526 | 7_1:+74429405 | None:intergenic |
| CTCCTATGTGGGGTTGTAGG+AGG | 0.562515 | 7_1:-74429450 | Msa1037720:CDS |
| AGAAGCAGATACAACAGATC+CGG | 0.565206 | 7_1:+74429869 | None:intergenic |
| CTTCTCCAATGAAAGATGAT+GGG | 0.569500 | 7_1:-74429851 | Msa1037720:CDS |
| ATATGCAGATAGGCCAAAGA+AGG | 0.573819 | 7_1:-74428776 | Msa1037720:CDS |
| GCCAAAGAAGGATATGAAGT+GGG | 0.575408 | 7_1:-74428764 | Msa1037720:CDS |
| GCTATGTATTGTAAGAGAGC+GGG | 0.575478 | 7_1:-74429915 | Msa1037720:CDS |
| TGAAGCTCATATATTCTGCA+TGG | 0.578726 | 7_1:-74429286 | Msa1037720:CDS |
| AGGAATATATGTTGAGCTGT+GGG | 0.579788 | 7_1:-74429509 | Msa1037720:CDS |
| GGGTTCATGGATCAAGGGTG+TGG | 0.581982 | 7_1:+74430572 | None:intergenic |
| GAGGAATATATGTTGAGCTG+TGG | 0.584405 | 7_1:-74429510 | Msa1037720:CDS |
| ACATCATCAACATGTACAAG+AGG | 0.587208 | 7_1:+74429312 | None:intergenic |
| TCAAGTCTCTGAGAGTTGCA+TGG | 0.594926 | 7_1:+74430842 | None:intergenic |
| GGGAACAATGAAAATGGTGG+AGG | 0.596591 | 7_1:-74429489 | Msa1037720:CDS |
| ATATAATTTAACCTGAGATG+CGG | 0.598236 | 7_1:+74430551 | None:intergenic |
| AATATGCTAAAGAATCGTTG+AGG | 0.599579 | 7_1:+74429787 | None:intergenic |
| TGCTATGTATTGTAAGAGAG+CGG | 0.604433 | 7_1:-74429916 | Msa1037720:CDS |
| CCAATGAAAGATGATGGGAC+TGG | 0.605272 | 7_1:-74429846 | Msa1037720:CDS |
| GTATTGTAAGAGAGCGGGAA+CGG | 0.611184 | 7_1:-74429910 | Msa1037720:CDS |
| GGCCAAAGAAGGATATGAAG+TGG | 0.614579 | 7_1:-74428765 | Msa1037720:CDS |
| GACCAGAAAAGGGAAGGTGA+TGG | 0.618651 | 7_1:-74430953 | None:intergenic |
| TTACCTTAAGATAAGCATCA+TGG | 0.622737 | 7_1:+74429760 | None:intergenic |
| TCAACAAAGCTATGTGACAA+AGG | 0.632597 | 7_1:-74428739 | Msa1037720:CDS |
| CCAAAGAAGGATATGAAGTG+GGG | 0.633636 | 7_1:-74428763 | Msa1037720:CDS |
| GGTGGTAAGTCTCCTATGTG+GGG | 0.640603 | 7_1:-74429460 | Msa1037720:CDS |
| TACAGAGGATGAGTCTAAGG+TGG | 0.642409 | 7_1:-74430712 | Msa1037720:intron |
| GATGCGGGTTCATGGATCAA+GGG | 0.646418 | 7_1:+74430567 | None:intergenic |
| ACTCTTCAATCCTTCACACC+CGG | 0.652288 | 7_1:-74429423 | Msa1037720:CDS |
| GGAACAATGAAAATGGTGGA+GGG | 0.652681 | 7_1:-74429488 | Msa1037720:CDS |
| GTACTTCATCAATCAATGGA+CGG | 0.654655 | 7_1:-74429260 | Msa1037720:CDS |
| TTATTCAAAGACAGTGACAG+AGG | 0.655380 | 7_1:-74429529 | Msa1037720:CDS |
| TATGCTAAAGAATCGTTGAG+GGG | 0.679306 | 7_1:+74429789 | None:intergenic |
| CAAAGAAGGATATGAAGTGG+GGG | 0.680278 | 7_1:-74428762 | Msa1037720:CDS |
| CACCTCCTACAACCCCACAT+AGG | 0.680826 | 7_1:+74429448 | None:intergenic |
| GTGAAGCGTCTCATTTACAC+CGG | 0.695408 | 7_1:-74429888 | Msa1037720:CDS |
| TGTGGGAACAATGAAAATGG+TGG | 0.725840 | 7_1:-74429492 | Msa1037720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATACAAAAAATCTATCA+TGG | - | chr7_1:74429314-74429333 | Msa1037720:CDS | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | - | chr7_1:74429504-74429523 | Msa1037720:CDS | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | - | chr7_1:74430031-74430050 | Msa1037720:intron | 15.0% |
| !! | AAAAATGCAAAAAATAACAA+CGG | + | chr7_1:74430543-74430562 | None:intergenic | 15.0% |
| !! | TTAATACAAAAAATCTATCA+TGG | - | chr7_1:74429314-74429333 | Msa1037720:CDS | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | - | chr7_1:74429504-74429523 | Msa1037720:CDS | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | - | chr7_1:74430031-74430050 | Msa1037720:intron | 15.0% |
| !! | AAAAATGCAAAAAATAACAA+CGG | + | chr7_1:74430543-74430562 | None:intergenic | 15.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | - | chr7_1:74429067-74429086 | Msa1037720:intron | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | + | chr7_1:74429234-74429253 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | + | chr7_1:74429235-74429254 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | - | chr7_1:74429503-74429522 | Msa1037720:CDS | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | + | chr7_1:74429545-74429564 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | - | chr7_1:74429552-74429571 | Msa1037720:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | + | chr7_1:74429561-74429580 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | - | chr7_1:74429563-74429582 | Msa1037720:intron | 20.0% |
| !! | AAAATGCAAAAAATAACAAC+GGG | + | chr7_1:74430542-74430561 | None:intergenic | 20.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | - | chr7_1:74429067-74429086 | Msa1037720:intron | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | + | chr7_1:74429234-74429253 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | + | chr7_1:74429235-74429254 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | - | chr7_1:74429503-74429522 | Msa1037720:CDS | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | + | chr7_1:74429545-74429564 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | - | chr7_1:74429552-74429571 | Msa1037720:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | + | chr7_1:74429561-74429580 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | - | chr7_1:74429563-74429582 | Msa1037720:intron | 20.0% |
| !! | AAAATGCAAAAAATAACAAC+GGG | + | chr7_1:74430542-74430561 | None:intergenic | 20.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | + | chr7_1:74429058-74429077 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | - | chr7_1:74429085-74429104 | Msa1037720:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | - | chr7_1:74429090-74429109 | Msa1037720:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | + | chr7_1:74429172-74429191 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | + | chr7_1:74429875-74429894 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | - | chr7_1:74429881-74429900 | Msa1037720:CDS | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | - | chr7_1:74429952-74429971 | Msa1037720:CDS | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | + | chr7_1:74429960-74429979 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | - | chr7_1:74430006-74430025 | Msa1037720:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | - | chr7_1:74430047-74430066 | Msa1037720:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | - | chr7_1:74430264-74430283 | Msa1037720:intron | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | - | chr7_1:74430265-74430284 | Msa1037720:intron | 25.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | + | chr7_1:74429058-74429077 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | - | chr7_1:74429085-74429104 | Msa1037720:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | - | chr7_1:74429090-74429109 | Msa1037720:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | + | chr7_1:74429172-74429191 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | + | chr7_1:74429875-74429894 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | - | chr7_1:74429881-74429900 | Msa1037720:CDS | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | - | chr7_1:74429952-74429971 | Msa1037720:CDS | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | + | chr7_1:74429960-74429979 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | - | chr7_1:74430006-74430025 | Msa1037720:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | - | chr7_1:74430047-74430066 | Msa1037720:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | - | chr7_1:74430264-74430283 | Msa1037720:intron | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | - | chr7_1:74430265-74430284 | Msa1037720:intron | 25.0% |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | - | chr7_1:74428732-74428751 | Msa1037720:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | + | chr7_1:74428864-74428883 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | + | chr7_1:74428865-74428884 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | - | chr7_1:74428975-74428994 | Msa1037720:intron | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | + | chr7_1:74429057-74429076 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | - | chr7_1:74429115-74429134 | Msa1037720:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | - | chr7_1:74429124-74429143 | Msa1037720:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | + | chr7_1:74429443-74429462 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | + | chr7_1:74429541-74429560 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | - | chr7_1:74429630-74429649 | Msa1037720:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | - | chr7_1:74429777-74429796 | Msa1037720:CDS | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | - | chr7_1:74429791-74429810 | Msa1037720:CDS | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | + | chr7_1:74429821-74429840 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | + | chr7_1:74429822-74429841 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | + | chr7_1:74429849-74429868 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | - | chr7_1:74430009-74430028 | Msa1037720:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | - | chr7_1:74430228-74430247 | Msa1037720:intron | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | - | chr7_1:74430263-74430282 | Msa1037720:intron | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | - | chr7_1:74430342-74430361 | Msa1037720:intron | 30.0% |
| TCTTGATTAACAGTGAATTC+TGG | + | chr7_1:74430435-74430454 | None:intergenic | 30.0% | |
| GTCTTTATACTTTAGTCTAG+TGG | - | chr7_1:74430494-74430513 | Msa1037720:intron | 30.0% | |
| ! | CAAGTGATACATTCTAGTTA+CGG | + | chr7_1:74430627-74430646 | None:intergenic | 30.0% |
| ! | AATGTATCACTTGATGATCT+CGG | - | chr7_1:74430634-74430653 | Msa1037720:CDS | 30.0% |
| ! | ATATGACGCTAAGATGATTT+TGG | - | chr7_1:74430902-74430921 | Msa1037720:CDS | 30.0% |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | - | chr7_1:74428732-74428751 | Msa1037720:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | + | chr7_1:74428864-74428883 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | + | chr7_1:74428865-74428884 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | - | chr7_1:74428975-74428994 | Msa1037720:intron | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | + | chr7_1:74429057-74429076 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | - | chr7_1:74429115-74429134 | Msa1037720:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | - | chr7_1:74429124-74429143 | Msa1037720:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | + | chr7_1:74429443-74429462 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | + | chr7_1:74429541-74429560 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | - | chr7_1:74429630-74429649 | Msa1037720:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | - | chr7_1:74429777-74429796 | Msa1037720:CDS | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | - | chr7_1:74429791-74429810 | Msa1037720:CDS | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | + | chr7_1:74429821-74429840 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | + | chr7_1:74429822-74429841 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | + | chr7_1:74429849-74429868 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | - | chr7_1:74430009-74430028 | Msa1037720:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | - | chr7_1:74430228-74430247 | Msa1037720:intron | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | - | chr7_1:74430263-74430282 | Msa1037720:intron | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | - | chr7_1:74430342-74430361 | Msa1037720:intron | 30.0% |
| TCTTGATTAACAGTGAATTC+TGG | + | chr7_1:74430435-74430454 | None:intergenic | 30.0% | |
| GTCTTTATACTTTAGTCTAG+TGG | - | chr7_1:74430494-74430513 | Msa1037720:intron | 30.0% | |
| ! | CAAGTGATACATTCTAGTTA+CGG | + | chr7_1:74430627-74430646 | None:intergenic | 30.0% |
| ! | AATGTATCACTTGATGATCT+CGG | - | chr7_1:74430634-74430653 | Msa1037720:CDS | 30.0% |
| ! | ATATGACGCTAAGATGATTT+TGG | - | chr7_1:74430902-74430921 | Msa1037720:CDS | 30.0% |
| CAACTAGATATCCAAACACA+TGG | + | chr7_1:74429081-74429100 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | + | chr7_1:74429216-74429235 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | + | chr7_1:74429282-74429301 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | - | chr7_1:74429280-74429299 | Msa1037720:CDS | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | + | chr7_1:74429360-74429379 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | - | chr7_1:74429370-74429389 | Msa1037720:CDS | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | + | chr7_1:74429374-74429393 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | - | chr7_1:74429373-74429392 | Msa1037720:CDS | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | - | chr7_1:74429374-74429393 | Msa1037720:CDS | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | + | chr7_1:74429426-74429445 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | + | chr7_1:74429454-74429473 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | + | chr7_1:74429467-74429486 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | - | chr7_1:74429690-74429709 | Msa1037720:intron | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | - | chr7_1:74429755-74429774 | Msa1037720:intron | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | + | chr7_1:74429820-74429839 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | - | chr7_1:74429843-74429862 | Msa1037720:CDS | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | - | chr7_1:74430077-74430096 | Msa1037720:intron | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | - | chr7_1:74430097-74430116 | Msa1037720:intron | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | + | chr7_1:74430297-74430316 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | - | chr7_1:74430320-74430339 | Msa1037720:intron | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | - | chr7_1:74430346-74430365 | Msa1037720:intron | 35.0% | |
| CACTGTTAATCAAGAGTAAG+TGG | - | chr7_1:74430440-74430459 | Msa1037720:intron | 35.0% | |
| TATTTGTCGTCTCTTGTTCA+TGG | - | chr7_1:74430587-74430606 | Msa1037720:CDS | 35.0% | |
| ! | CATTCTAGTTACGGTTCAAT+TGG | + | chr7_1:74430618-74430637 | None:intergenic | 35.0% |
| ! | ATGTATCACTTGATGATCTC+GGG | - | chr7_1:74430635-74430654 | Msa1037720:CDS | 35.0% |
| CATGTATGAGAAGAAGGAAT+AGG | + | chr7_1:74430691-74430710 | None:intergenic | 35.0% | |
| AATGTGCATGTATGAGAAGA+AGG | + | chr7_1:74430697-74430716 | None:intergenic | 35.0% | |
| !! | CATACATGCACATTTTTCAG+TGG | - | chr7_1:74430703-74430722 | Msa1037720:CDS | 35.0% |
| !! | ATGCACATTTTTCAGTGGAT+TGG | - | chr7_1:74430708-74430727 | Msa1037720:CDS | 35.0% |
| CACATTACAGATATGCAGAT+AGG | - | chr7_1:74430820-74430839 | Msa1037720:intron | 35.0% | |
| TCAACAAAGCTATGTGACAA+AGG | - | chr7_1:74430867-74430886 | Msa1037720:CDS | 35.0% | |
| TGTCAAATGTGCTAGAAGAA+TGG | - | chr7_1:74430932-74430951 | Msa1037720:CDS | 35.0% | |
| GTCAAATGTGCTAGAAGAAT+GGG | - | chr7_1:74430933-74430952 | Msa1037720:CDS | 35.0% | |
| CAACTAGATATCCAAACACA+TGG | + | chr7_1:74429081-74429100 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | + | chr7_1:74429216-74429235 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | + | chr7_1:74429282-74429301 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | - | chr7_1:74429280-74429299 | Msa1037720:CDS | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | + | chr7_1:74429360-74429379 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | - | chr7_1:74429370-74429389 | Msa1037720:CDS | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | + | chr7_1:74429374-74429393 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | - | chr7_1:74429373-74429392 | Msa1037720:CDS | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | - | chr7_1:74429374-74429393 | Msa1037720:CDS | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | + | chr7_1:74429426-74429445 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | + | chr7_1:74429454-74429473 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | + | chr7_1:74429467-74429486 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | - | chr7_1:74429690-74429709 | Msa1037720:intron | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | - | chr7_1:74429755-74429774 | Msa1037720:intron | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | + | chr7_1:74429820-74429839 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | - | chr7_1:74429843-74429862 | Msa1037720:CDS | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | - | chr7_1:74430077-74430096 | Msa1037720:intron | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | - | chr7_1:74430097-74430116 | Msa1037720:intron | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | + | chr7_1:74430297-74430316 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | - | chr7_1:74430320-74430339 | Msa1037720:intron | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | - | chr7_1:74430346-74430365 | Msa1037720:intron | 35.0% | |
| CACTGTTAATCAAGAGTAAG+TGG | - | chr7_1:74430440-74430459 | Msa1037720:intron | 35.0% | |
| TATTTGTCGTCTCTTGTTCA+TGG | - | chr7_1:74430587-74430606 | Msa1037720:CDS | 35.0% | |
| ! | CATTCTAGTTACGGTTCAAT+TGG | + | chr7_1:74430618-74430637 | None:intergenic | 35.0% |
| ! | ATGTATCACTTGATGATCTC+GGG | - | chr7_1:74430635-74430654 | Msa1037720:CDS | 35.0% |
| CATGTATGAGAAGAAGGAAT+AGG | + | chr7_1:74430691-74430710 | None:intergenic | 35.0% | |
| AATGTGCATGTATGAGAAGA+AGG | + | chr7_1:74430697-74430716 | None:intergenic | 35.0% | |
| !! | CATACATGCACATTTTTCAG+TGG | - | chr7_1:74430703-74430722 | Msa1037720:CDS | 35.0% |
| !! | ATGCACATTTTTCAGTGGAT+TGG | - | chr7_1:74430708-74430727 | Msa1037720:CDS | 35.0% |
| CACATTACAGATATGCAGAT+AGG | - | chr7_1:74430820-74430839 | Msa1037720:intron | 35.0% | |
| TCAACAAAGCTATGTGACAA+AGG | - | chr7_1:74430867-74430886 | Msa1037720:CDS | 35.0% | |
| TGTCAAATGTGCTAGAAGAA+TGG | - | chr7_1:74430932-74430951 | Msa1037720:CDS | 35.0% | |
| GTCAAATGTGCTAGAAGAAT+GGG | - | chr7_1:74430933-74430952 | Msa1037720:CDS | 35.0% | |
| GCAAATCACACACTTTACAG+AGG | - | chr7_1:74428879-74428898 | Msa1037720:intron | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | - | chr7_1:74428891-74428910 | Msa1037720:intron | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | - | chr7_1:74428933-74428952 | Msa1037720:intron | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | + | chr7_1:74428937-74428956 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | - | chr7_1:74428987-74429006 | Msa1037720:intron | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | - | chr7_1:74428988-74429007 | Msa1037720:intron | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | - | chr7_1:74429189-74429208 | Msa1037720:CDS | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | - | chr7_1:74429197-74429216 | Msa1037720:CDS | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | + | chr7_1:74429201-74429220 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | + | chr7_1:74429425-74429444 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | - | chr7_1:74429461-74429480 | Msa1037720:CDS | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | - | chr7_1:74429691-74429710 | Msa1037720:intron | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | + | chr7_1:74429740-74429759 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | - | chr7_1:74429754-74429773 | Msa1037720:intron | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | - | chr7_1:74430096-74430115 | Msa1037720:intron | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | - | chr7_1:74430111-74430130 | Msa1037720:intron | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | - | chr7_1:74430114-74430133 | Msa1037720:intron | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | - | chr7_1:74430118-74430137 | Msa1037720:intron | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | + | chr7_1:74430204-74430223 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | + | chr7_1:74430205-74430224 | None:intergenic | 40.0% | |
| ACTTTAGTCTAGTGGAATCG+TGG | - | chr7_1:74430502-74430521 | Msa1037720:intron | 40.0% | |
| ATATGCAGATAGGCCAAAGA+AGG | - | chr7_1:74430830-74430849 | Msa1037720:intron | 40.0% | |
| GCCAAAGAAGGATATGAAGT+GGG | - | chr7_1:74430842-74430861 | Msa1037720:CDS | 40.0% | |
| CCAAAGAAGGATATGAAGTG+GGG | - | chr7_1:74430843-74430862 | Msa1037720:CDS | 40.0% | |
| CAAAGAAGGATATGAAGTGG+GGG | - | chr7_1:74430844-74430863 | Msa1037720:CDS | 40.0% | |
| TAGAAGAATGGGTGATCTCT+AGG | - | chr7_1:74430944-74430963 | Msa1037720:exon | 40.0% | |
| AGAAGAATGGGTGATCTCTA+GGG | - | chr7_1:74430945-74430964 | Msa1037720:exon | 40.0% | |
| GCAAATCACACACTTTACAG+AGG | - | chr7_1:74428879-74428898 | Msa1037720:intron | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | - | chr7_1:74428891-74428910 | Msa1037720:intron | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | - | chr7_1:74428933-74428952 | Msa1037720:intron | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | + | chr7_1:74428937-74428956 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | - | chr7_1:74428987-74429006 | Msa1037720:intron | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | - | chr7_1:74428988-74429007 | Msa1037720:intron | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | - | chr7_1:74429189-74429208 | Msa1037720:CDS | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | - | chr7_1:74429197-74429216 | Msa1037720:CDS | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | + | chr7_1:74429201-74429220 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | + | chr7_1:74429425-74429444 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | - | chr7_1:74429461-74429480 | Msa1037720:CDS | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | - | chr7_1:74429691-74429710 | Msa1037720:intron | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | + | chr7_1:74429740-74429759 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | - | chr7_1:74429754-74429773 | Msa1037720:intron | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | - | chr7_1:74430096-74430115 | Msa1037720:intron | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | - | chr7_1:74430111-74430130 | Msa1037720:intron | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | - | chr7_1:74430114-74430133 | Msa1037720:intron | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | - | chr7_1:74430118-74430137 | Msa1037720:intron | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | + | chr7_1:74430204-74430223 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | + | chr7_1:74430205-74430224 | None:intergenic | 40.0% | |
| ACTTTAGTCTAGTGGAATCG+TGG | - | chr7_1:74430502-74430521 | Msa1037720:intron | 40.0% | |
| ATATGCAGATAGGCCAAAGA+AGG | - | chr7_1:74430830-74430849 | Msa1037720:intron | 40.0% | |
| GCCAAAGAAGGATATGAAGT+GGG | - | chr7_1:74430842-74430861 | Msa1037720:CDS | 40.0% | |
| CCAAAGAAGGATATGAAGTG+GGG | - | chr7_1:74430843-74430862 | Msa1037720:CDS | 40.0% | |
| CAAAGAAGGATATGAAGTGG+GGG | - | chr7_1:74430844-74430863 | Msa1037720:CDS | 40.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | - | chr7_1:74428668-74428687 | Msa1037720:CDS | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | - | chr7_1:74428681-74428700 | Msa1037720:CDS | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | + | chr7_1:74428767-74428786 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | - | chr7_1:74428852-74428871 | Msa1037720:intron | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | + | chr7_1:74428858-74428877 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | + | chr7_1:74428861-74428880 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | - | chr7_1:74428894-74428913 | Msa1037720:intron | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | + | chr7_1:74429353-74429372 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | + | chr7_1:74429418-74429437 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | - | chr7_1:74429655-74429674 | Msa1037720:intron | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | - | chr7_1:74429656-74429675 | Msa1037720:intron | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | - | chr7_1:74429696-74429715 | Msa1037720:intron | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | - | chr7_1:74429718-74429737 | Msa1037720:intron | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | + | chr7_1:74429763-74429782 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | - | chr7_1:74429760-74429779 | Msa1037720:intron | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | - | chr7_1:74430117-74430136 | Msa1037720:intron | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | - | chr7_1:74430122-74430141 | Msa1037720:intron | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | - | chr7_1:74430145-74430164 | Msa1037720:intron | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | - | chr7_1:74430183-74430202 | Msa1037720:intron | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | - | chr7_1:74430242-74430261 | Msa1037720:intron | 45.0% | |
| TTAGTCTAGTGGAATCGTGG+TGG | - | chr7_1:74430505-74430524 | Msa1037720:intron | 45.0% | |
| GGCCAAAGAAGGATATGAAG+TGG | - | chr7_1:74430841-74430860 | Msa1037720:intron | 45.0% | |
| CCCCACTTCATATCCTTCTT+TGG | + | chr7_1:74430846-74430865 | None:intergenic | 45.0% | |
| GAAGAATGGGTGATCTCTAG+GGG | - | chr7_1:74430946-74430965 | Msa1037720:exon | 45.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | - | chr7_1:74428668-74428687 | Msa1037720:CDS | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | - | chr7_1:74428681-74428700 | Msa1037720:CDS | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | + | chr7_1:74428767-74428786 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | - | chr7_1:74428852-74428871 | Msa1037720:intron | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | + | chr7_1:74428858-74428877 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | + | chr7_1:74428861-74428880 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | - | chr7_1:74428894-74428913 | Msa1037720:intron | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | + | chr7_1:74429353-74429372 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | + | chr7_1:74429418-74429437 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | - | chr7_1:74429655-74429674 | Msa1037720:intron | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | - | chr7_1:74429656-74429675 | Msa1037720:intron | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | - | chr7_1:74429696-74429715 | Msa1037720:intron | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | - | chr7_1:74429718-74429737 | Msa1037720:intron | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | + | chr7_1:74429763-74429782 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | - | chr7_1:74429760-74429779 | Msa1037720:intron | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | - | chr7_1:74430117-74430136 | Msa1037720:intron | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | - | chr7_1:74430122-74430141 | Msa1037720:intron | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | - | chr7_1:74430145-74430164 | Msa1037720:intron | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | - | chr7_1:74430183-74430202 | Msa1037720:intron | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | - | chr7_1:74430242-74430261 | Msa1037720:intron | 45.0% | |
| TTAGTCTAGTGGAATCGTGG+TGG | - | chr7_1:74430505-74430524 | Msa1037720:intron | 45.0% | |
| GGCCAAAGAAGGATATGAAG+TGG | - | chr7_1:74430841-74430860 | Msa1037720:intron | 45.0% | |
| CCCCACTTCATATCCTTCTT+TGG | + | chr7_1:74430846-74430865 | None:intergenic | 45.0% | |
| GATGCGGGTTCATGGATCAA+GGG | + | chr7_1:74429042-74429061 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | + | chr7_1:74429043-74429062 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | + | chr7_1:74429050-74429069 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | - | chr7_1:74430125-74430144 | Msa1037720:intron | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | - | chr7_1:74430144-74430163 | Msa1037720:intron | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | - | chr7_1:74430146-74430165 | Msa1037720:intron | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | - | chr7_1:74430153-74430172 | Msa1037720:intron | 50.0% | |
| GATGCGGGTTCATGGATCAA+GGG | + | chr7_1:74429042-74429061 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | + | chr7_1:74429043-74429062 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | + | chr7_1:74429050-74429069 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | - | chr7_1:74430125-74430144 | Msa1037720:intron | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | - | chr7_1:74430144-74430163 | Msa1037720:intron | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | - | chr7_1:74430146-74430165 | Msa1037720:intron | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | - | chr7_1:74430153-74430172 | Msa1037720:intron | 50.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | - | chr7_1:74428690-74428709 | Msa1037720:CDS | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | + | chr7_1:74429037-74429056 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | - | chr7_1:74429044-74429063 | Msa1037720:intron | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | - | chr7_1:74430128-74430147 | Msa1037720:intron | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | - | chr7_1:74430156-74430175 | Msa1037720:intron | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | + | chr7_1:74430161-74430180 | None:intergenic | 55.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | - | chr7_1:74428690-74428709 | Msa1037720:CDS | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | + | chr7_1:74429037-74429056 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | - | chr7_1:74429044-74429063 | Msa1037720:intron | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | - | chr7_1:74430128-74430147 | Msa1037720:intron | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | - | chr7_1:74430156-74430175 | Msa1037720:intron | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | + | chr7_1:74430161-74430180 | None:intergenic | 55.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | + | chr7_1:74430196-74430215 | None:intergenic | 60.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | + | chr7_1:74430196-74430215 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 74428663 | 74430965 | 74428663 | ID=Msa1037720;Name=Msa1037720 |
| chr7_1 | mRNA | 74428663 | 74430965 | 74428663 | ID=Msa1037720-mRNA-1;Parent=Msa1037720;Name=Msa1037720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=9|0.75|0.4|1|1|1|5|0|340 |
| chr7_1 | exon | 74428663 | 74428798 | 74428663 | ID=Msa1037720-mRNA-1:exon:18750;Parent=Msa1037720-mRNA-1 |
| chr7_1 | exon | 74429174 | 74429559 | 74429174 | ID=Msa1037720-mRNA-1:exon:18749;Parent=Msa1037720-mRNA-1 |
| chr7_1 | exon | 74429764 | 74429982 | 74429764 | ID=Msa1037720-mRNA-1:exon:18748;Parent=Msa1037720-mRNA-1 |
| chr7_1 | exon | 74430563 | 74430729 | 74430563 | ID=Msa1037720-mRNA-1:exon:18747;Parent=Msa1037720-mRNA-1 |
| chr7_1 | exon | 74430842 | 74430965 | 74430842 | ID=Msa1037720-mRNA-1:exon:18746;Parent=Msa1037720-mRNA-1 |
| chr7_1 | five_prime_UTR | 74430957 | 74430965 | 74430957 | ID=Msa1037720-mRNA-1:five_prime_utr;Parent=Msa1037720-mRNA-1 |
| chr7_1 | CDS | 74430842 | 74430956 | 74430842 | ID=Msa1037720-mRNA-1:cds;Parent=Msa1037720-mRNA-1 |
| chr7_1 | CDS | 74430563 | 74430729 | 74430563 | ID=Msa1037720-mRNA-1:cds;Parent=Msa1037720-mRNA-1 |
| chr7_1 | CDS | 74429764 | 74429982 | 74429764 | ID=Msa1037720-mRNA-1:cds;Parent=Msa1037720-mRNA-1 |
| chr7_1 | CDS | 74429174 | 74429559 | 74429174 | ID=Msa1037720-mRNA-1:cds;Parent=Msa1037720-mRNA-1 |
| chr7_1 | CDS | 74428663 | 74428798 | 74428663 | ID=Msa1037720-mRNA-1:cds;Parent=Msa1037720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
