Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130640 | XP_039683725.1 | 93.151 | 292 | 20 | 0 | 1 | 292 | 1 | 292 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130640 | sp|Q7PCC4|ANRCH_VITVI | 33.449 | 287 | 175 | 8 | 8 | 291 | 13 | 286 | 1.43e-47 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130640 | G7L426 | 93.151 | 292 | 20 | 0 | 1 | 292 | 1 | 292 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0437340 | Msa1130640 | 0.988347 | 1.159380e-173 | -8.615850e-47 |
| Msa1037720 | Msa1130640 | 0.874866 | 4.831926e-68 | -8.615850e-47 |
| Msa1130340 | Msa1130640 | 0.963253 | 7.364394e-122 | -8.615850e-47 |
| Msa1130640 | Msa1427790 | 0.947415 | 7.030756e-106 | -8.615850e-47 |
| Msa1130640 | Msa1441210 | 0.964128 | 6.139782e-123 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130640 | MtrunA17_Chr7g0275521 | 93.151 | 292 | 20 | 0 | 1 | 292 | 1 | 292 | 0.0 | 567 |
| Msa1130640 | MtrunA17_Chr2g0281991 | 59.184 | 294 | 115 | 4 | 1 | 292 | 2 | 292 | 1.01e-120 | 349 |
| Msa1130640 | MtrunA17_Chr2g0282001 | 59.184 | 294 | 115 | 4 | 1 | 292 | 1 | 291 | 2.42e-119 | 345 |
| Msa1130640 | MtrunA17_Chr2g0282011 | 59.044 | 293 | 115 | 4 | 1 | 291 | 2 | 291 | 2.59e-111 | 325 |
| Msa1130640 | MtrunA17_Chr7g0245731 | 33.904 | 292 | 169 | 7 | 2 | 290 | 53 | 323 | 1.50e-45 | 157 |
| Msa1130640 | MtrunA17_Chr1g0155411 | 33.916 | 286 | 171 | 6 | 7 | 292 | 8 | 275 | 7.84e-45 | 155 |
| Msa1130640 | MtrunA17_Chr7g0245741 | 34.130 | 293 | 169 | 7 | 2 | 291 | 3 | 274 | 1.35e-44 | 154 |
| Msa1130640 | MtrunA17_Chr4g0048961 | 33.564 | 289 | 176 | 6 | 6 | 291 | 13 | 288 | 3.49e-44 | 153 |
| Msa1130640 | MtrunA17_Chr1g0155431 | 32.517 | 286 | 175 | 6 | 7 | 292 | 8 | 275 | 5.22e-43 | 150 |
| Msa1130640 | MtrunA17_Chr4g0042101 | 34.694 | 294 | 171 | 11 | 6 | 292 | 23 | 302 | 5.61e-43 | 150 |
| Msa1130640 | MtrunA17_Chr7g0245691 | 35.495 | 293 | 171 | 9 | 2 | 292 | 3 | 279 | 2.23e-42 | 148 |
| Msa1130640 | MtrunA17_Chr7g0245671 | 34.375 | 288 | 172 | 8 | 6 | 292 | 7 | 278 | 2.58e-42 | 148 |
| Msa1130640 | MtrunA17_Chr7g0245641 | 35.017 | 297 | 166 | 9 | 2 | 292 | 40 | 315 | 1.11e-41 | 147 |
| Msa1130640 | MtrunA17_Chr7g0245631 | 31.849 | 292 | 179 | 8 | 2 | 292 | 3 | 275 | 3.71e-38 | 137 |
| Msa1130640 | MtrunA17_Chr4g0010991 | 32.180 | 289 | 174 | 8 | 7 | 292 | 8 | 277 | 2.62e-35 | 129 |
| Msa1130640 | MtrunA17_Chr2g0331211 | 31.724 | 290 | 172 | 10 | 6 | 291 | 4 | 271 | 6.84e-32 | 120 |
| Msa1130640 | MtrunA17_Chr7g0245711 | 31.325 | 249 | 148 | 6 | 44 | 290 | 8 | 235 | 7.18e-31 | 117 |
| Msa1130640 | MtrunA17_Chr3g0077231 | 31.228 | 285 | 176 | 8 | 7 | 291 | 6 | 270 | 2.36e-30 | 116 |
| Msa1130640 | MtrunA17_Chr3g0106111 | 30.241 | 291 | 173 | 9 | 7 | 292 | 5 | 270 | 3.78e-30 | 115 |
| Msa1130640 | MtrunA17_Chr8g0364051 | 31.379 | 290 | 164 | 10 | 7 | 289 | 8 | 269 | 4.81e-30 | 115 |
| Msa1130640 | MtrunA17_Chr3g0077221 | 30.070 | 286 | 178 | 8 | 7 | 291 | 10 | 274 | 9.84e-30 | 114 |
| Msa1130640 | MtrunA17_Chr4g0039321 | 31.034 | 290 | 166 | 10 | 7 | 289 | 9 | 271 | 2.25e-29 | 114 |
| Msa1130640 | MtrunA17_Chr4g0002661 | 30.903 | 288 | 174 | 10 | 6 | 291 | 12 | 276 | 8.67e-29 | 112 |
| Msa1130640 | MtrunA17_Chr5g0431311 | 29.617 | 287 | 180 | 9 | 7 | 292 | 5 | 270 | 1.10e-28 | 112 |
| Msa1130640 | MtrunA17_Chr8g0363831 | 32.872 | 289 | 161 | 12 | 7 | 289 | 9 | 270 | 4.62e-28 | 110 |
| Msa1130640 | MtrunA17_Chr2g0291541 | 31.271 | 291 | 169 | 12 | 7 | 289 | 10 | 277 | 1.38e-27 | 109 |
| Msa1130640 | MtrunA17_Chr4g0039311 | 29.720 | 286 | 175 | 11 | 7 | 289 | 11 | 273 | 1.67e-27 | 108 |
| Msa1130640 | MtrunA17_Chr2g0333781 | 28.772 | 285 | 177 | 9 | 7 | 291 | 20 | 278 | 2.72e-26 | 105 |
| Msa1130640 | MtrunA17_Chr5g0423551 | 28.374 | 289 | 185 | 10 | 4 | 291 | 1 | 268 | 6.06e-26 | 104 |
| Msa1130640 | MtrunA17_Chr4g0001321 | 28.028 | 289 | 174 | 11 | 7 | 291 | 17 | 275 | 3.49e-25 | 102 |
| Msa1130640 | MtrunA17_Chr4g0002961 | 29.210 | 291 | 175 | 10 | 6 | 291 | 12 | 276 | 7.12e-25 | 101 |
| Msa1130640 | MtrunA17_Chr5g0411071 | 22.826 | 276 | 179 | 9 | 7 | 281 | 12 | 254 | 4.34e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130640 | AT4G27250.1 | 34.737 | 285 | 167 | 6 | 8 | 284 | 14 | 287 | 1.82e-47 | 162 |
| Msa1130640 | AT4G27250.2 | 34.386 | 285 | 158 | 7 | 8 | 284 | 14 | 277 | 8.48e-46 | 158 |
| Msa1130640 | AT1G61720.1 | 32.986 | 288 | 181 | 7 | 6 | 292 | 12 | 288 | 3.58e-40 | 143 |
| Msa1130640 | AT1G09510.1 | 33.217 | 286 | 171 | 6 | 7 | 292 | 8 | 273 | 7.82e-39 | 139 |
| Msa1130640 | AT1G09500.3 | 33.566 | 286 | 169 | 8 | 7 | 291 | 8 | 273 | 1.28e-38 | 137 |
| Msa1130640 | AT1G09500.1 | 34.375 | 288 | 164 | 10 | 7 | 291 | 8 | 273 | 4.80e-38 | 137 |
| Msa1130640 | AT5G42800.1 | 30.769 | 286 | 180 | 6 | 7 | 292 | 8 | 275 | 7.39e-38 | 138 |
| Msa1130640 | AT2G45400.2 | 32.292 | 288 | 178 | 7 | 7 | 291 | 40 | 313 | 6.79e-37 | 134 |
| Msa1130640 | AT2G45400.1 | 32.292 | 288 | 178 | 7 | 7 | 291 | 40 | 313 | 1.06e-36 | 134 |
| Msa1130640 | AT1G09490.1 | 32.180 | 289 | 170 | 8 | 7 | 292 | 8 | 273 | 2.15e-36 | 132 |
| Msa1130640 | AT1G09480.2 | 32.281 | 285 | 173 | 7 | 7 | 291 | 8 | 272 | 1.02e-35 | 130 |
| Msa1130640 | AT1G09480.1 | 32.281 | 285 | 173 | 7 | 7 | 291 | 55 | 319 | 2.97e-35 | 130 |
| Msa1130640 | AT4G35420.1 | 30.137 | 292 | 177 | 10 | 2 | 289 | 3 | 271 | 6.36e-35 | 129 |
| Msa1130640 | AT1G66800.1 | 33.564 | 289 | 160 | 11 | 7 | 291 | 8 | 268 | 6.72e-35 | 129 |
| Msa1130640 | AT5G19440.1 | 32.872 | 289 | 166 | 9 | 7 | 291 | 10 | 274 | 1.03e-33 | 125 |
| Msa1130640 | AT1G51410.1 | 31.930 | 285 | 174 | 7 | 7 | 291 | 9 | 273 | 4.90e-32 | 121 |
| Msa1130640 | AT2G45400.4 | 33.945 | 218 | 137 | 4 | 7 | 222 | 40 | 252 | 1.56e-27 | 107 |
| Msa1130640 | AT2G02400.1 | 29.167 | 288 | 178 | 10 | 7 | 292 | 6 | 269 | 4.40e-27 | 107 |
| Msa1130640 | AT5G58490.1 | 30.169 | 295 | 168 | 11 | 7 | 292 | 9 | 274 | 5.79e-27 | 107 |
| Msa1130640 | AT1G68540.1 | 29.932 | 294 | 176 | 10 | 4 | 291 | 1 | 270 | 1.88e-26 | 106 |
| Msa1130640 | AT1G15950.6 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 4.58e-26 | 104 |
| Msa1130640 | AT1G15950.5 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 6.18e-26 | 103 |
| Msa1130640 | AT1G15950.4 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 8.73e-26 | 103 |
| Msa1130640 | AT1G80820.2 | 29.617 | 287 | 172 | 9 | 7 | 291 | 8 | 266 | 9.11e-26 | 103 |
| Msa1130640 | AT2G33590.1 | 30.100 | 299 | 165 | 11 | 6 | 292 | 8 | 274 | 9.97e-26 | 104 |
| Msa1130640 | AT1G15950.3 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 1.60e-25 | 104 |
| Msa1130640 | AT1G15950.1 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 1.60e-25 | 104 |
| Msa1130640 | AT1G15950.2 | 30.314 | 287 | 170 | 10 | 7 | 291 | 13 | 271 | 1.79e-25 | 103 |
| Msa1130640 | AT1G80820.1 | 30.000 | 290 | 167 | 11 | 7 | 291 | 8 | 266 | 3.41e-25 | 103 |
| Msa1130640 | AT2G45400.3 | 29.562 | 274 | 172 | 8 | 19 | 291 | 3 | 256 | 4.36e-25 | 102 |
| Msa1130640 | AT1G76470.1 | 30.272 | 294 | 179 | 11 | 1 | 290 | 1 | 272 | 1.59e-24 | 101 |
| Msa1130640 | AT1G25460.1 | 29.210 | 291 | 176 | 10 | 4 | 289 | 1 | 266 | 6.04e-23 | 96.7 |
| Msa1130640 | AT2G33600.1 | 30.796 | 289 | 154 | 11 | 6 | 281 | 8 | 263 | 6.43e-22 | 94.0 |
| Msa1130640 | AT1G09500.2 | 30.078 | 256 | 154 | 10 | 39 | 291 | 6 | 239 | 2.50e-21 | 91.7 |
| Msa1130640 | AT1G09490.2 | 27.237 | 257 | 161 | 8 | 39 | 292 | 9 | 242 | 1.20e-19 | 87.0 |
| Msa1130640 | AT4G33360.2 | 24.916 | 297 | 172 | 12 | 6 | 292 | 14 | 269 | 6.40e-14 | 71.2 |
| Msa1130640 | AT4G33360.1 | 24.916 | 297 | 172 | 12 | 6 | 292 | 14 | 269 | 7.61e-14 | 71.2 |
| Msa1130640 | AT4G33360.3 | 24.916 | 297 | 172 | 12 | 6 | 292 | 2 | 257 | 9.26e-14 | 70.9 |
| Msa1130640 | AT2G23910.3 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 5.58e-13 | 68.2 |
| Msa1130640 | AT2G23910.2 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 5.85e-13 | 68.2 |
| Msa1130640 | AT2G23910.1 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 6.67e-13 | 68.2 |
| Msa1130640 | AT4G30470.1 | 20.714 | 280 | 183 | 8 | 8 | 281 | 11 | 257 | 6.91e-11 | 62.4 |
Find 64 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTTTGAGGCTGCAATTA+AGG | 0.212022 | 7_3:-82795031 | Msa1130640:CDS |
| TGCAATCATTAACTGAATTC+TGG | 0.281845 | 7_3:+82793586 | None:intergenic |
| GTACCATGATGCTTATCTTA+AGG | 0.339878 | 7_3:-82794175 | Msa1130640:intron |
| ATTACTGAAGCATCGCTTGC+TGG | 0.342941 | 7_3:-82794363 | Msa1130640:CDS |
| GACTTTGAGGCTGCAATTAA+GGG | 0.352832 | 7_3:-82795030 | Msa1130640:CDS |
| GTATGCGTCACAGGTGCTTC+TGG | 0.352861 | 7_3:-82795328 | Msa1130640:CDS |
| TTACAACTCAATTGACTTTG+AGG | 0.381158 | 7_3:-82795043 | Msa1130640:CDS |
| GACTGGTTTCAATGATATAA+TGG | 0.390602 | 7_3:-82794241 | Msa1130640:CDS |
| TAACCTGAGATGCGGGTTCA+TGG | 0.394734 | 7_3:+82794971 | None:intergenic |
| CTTTACAGAGGATGAGTCTA+AGG | 0.400084 | 7_3:-82795127 | Msa1130640:intron |
| TCCACAATCACAAGACAAAC+TGG | 0.405298 | 7_3:-82795085 | Msa1130640:CDS |
| CCAGTCCCATCATCTTTCAT+TGG | 0.410585 | 7_3:+82794258 | None:intergenic |
| AGTCTCCTATGTGGGGTTGT+AGG | 0.417874 | 7_3:-82793865 | Msa1130640:CDS |
| ATATAATGGATGAAACTTGC+TGG | 0.423061 | 7_3:-82794227 | Msa1130640:CDS |
| GATCCATGAACCCGCATCTC+AGG | 0.456989 | 7_3:-82794974 | Msa1130640:intron |
| GCTTCTCCAATGAAAGATGA+TGG | 0.461395 | 7_3:-82794264 | Msa1130640:CDS |
| CAATGAAAATGGTGGAGGGT+TGG | 0.467224 | 7_3:-82793896 | Msa1130640:CDS |
| ATGTGTAAGGTATGCGTCAC+AGG | 0.467565 | 7_3:-82795337 | Msa1130640:CDS |
| AGCTGTGGGAACAATGAAAA+TGG | 0.468232 | 7_3:-82793907 | Msa1130640:CDS |
| TGCAAATGGACGCAAATCAC+TGG | 0.474718 | 7_3:-82793776 | Msa1130640:CDS |
| TGAAAATGGTGGAGGGTTGG+AGG | 0.475120 | 7_3:-82793893 | Msa1130640:CDS |
| CATATCACAGAAAATGCAAA+TGG | 0.475143 | 7_3:-82793790 | Msa1130640:CDS |
| AGGTGGTAAGTCTCCTATGT+GGG | 0.493459 | 7_3:-82793873 | Msa1130640:CDS |
| ACCAGTTTGTCTTGTGATTG+TGG | 0.493902 | 7_3:+82795084 | None:intergenic |
| GAAAGTACTTCATCAATCAA+TGG | 0.516637 | 7_3:-82793676 | Msa1130640:CDS |
| TTACTGAAGCATCGCTTGCT+GGG | 0.524780 | 7_3:-82794362 | Msa1130640:CDS |
| AGATGCGGGTTCATGGATCA+AGG | 0.529187 | 7_3:+82794978 | None:intergenic |
| GATACAAATTGCAACGCTAC+CGG | 0.530650 | 7_3:+82793816 | None:intergenic |
| GGTGATGGAAGCAATGTGTA+AGG | 0.539971 | 7_3:-82795350 | Msa1130640:exon |
| TATAATTTAACCTGAGATGC+GGG | 0.540168 | 7_3:+82794964 | None:intergenic |
| ATATGCTAAAGAATCGTTGA+GGG | 0.549055 | 7_3:+82794200 | None:intergenic |
| AAATGGTGGAGGGTTGGAGG+TGG | 0.552531 | 7_3:-82793890 | Msa1130640:CDS |
| TGCAACGCTACCGGGTGTGA+AGG | 0.555436 | 7_3:+82793825 | None:intergenic |
| GAGGTGGTAAGTCTCCTATG+TGG | 0.557624 | 7_3:-82793874 | Msa1130640:CDS |
| ATACAAATTGCAACGCTACC+GGG | 0.561526 | 7_3:+82793817 | None:intergenic |
| CTCCTATGTGGGGTTGTAGG+AGG | 0.562515 | 7_3:-82793862 | Msa1130640:CDS |
| AGAAGCAGATACAACAGATC+CGG | 0.565206 | 7_3:+82794281 | None:intergenic |
| CTTCTCCAATGAAAGATGAT+GGG | 0.569500 | 7_3:-82794263 | Msa1130640:CDS |
| GCTATGTATTGTAAGAGAGC+GGG | 0.575478 | 7_3:-82794327 | Msa1130640:CDS |
| TGAAGCTCATATATTCTGCA+TGG | 0.578726 | 7_3:-82793698 | Msa1130640:CDS |
| AGGAATATATGTTGAGCTGT+GGG | 0.579788 | 7_3:-82793921 | Msa1130640:CDS |
| GGGTTCATGGATCAAGGGTG+TGG | 0.581982 | 7_3:+82794984 | None:intergenic |
| GAGGAATATATGTTGAGCTG+TGG | 0.584405 | 7_3:-82793922 | Msa1130640:CDS |
| ACATCATCAACATGTACAAG+AGG | 0.587208 | 7_3:+82793724 | None:intergenic |
| TCAAGTCTCTGAGAGTTGCA+TGG | 0.594926 | 7_3:+82795254 | None:intergenic |
| GGGAACAATGAAAATGGTGG+AGG | 0.596591 | 7_3:-82793901 | Msa1130640:CDS |
| ATATAATTTAACCTGAGATG+CGG | 0.598236 | 7_3:+82794963 | None:intergenic |
| AATATGCTAAAGAATCGTTG+AGG | 0.599579 | 7_3:+82794199 | None:intergenic |
| TGCTATGTATTGTAAGAGAG+CGG | 0.604433 | 7_3:-82794328 | Msa1130640:CDS |
| CCAATGAAAGATGATGGGAC+TGG | 0.605272 | 7_3:-82794258 | Msa1130640:CDS |
| GTATTGTAAGAGAGCGGGAA+CGG | 0.611184 | 7_3:-82794322 | Msa1130640:CDS |
| GACCAGAAAAGGGAAGGTGA+TGG | 0.618651 | 7_3:-82795365 | None:intergenic |
| TTACCTTAAGATAAGCATCA+TGG | 0.622737 | 7_3:+82794172 | None:intergenic |
| GGTGGTAAGTCTCCTATGTG+GGG | 0.640603 | 7_3:-82793872 | Msa1130640:CDS |
| TACAGAGGATGAGTCTAAGG+TGG | 0.642409 | 7_3:-82795124 | Msa1130640:intron |
| GATGCGGGTTCATGGATCAA+GGG | 0.646418 | 7_3:+82794979 | None:intergenic |
| ACTCTTCAATCCTTCACACC+CGG | 0.652288 | 7_3:-82793835 | Msa1130640:CDS |
| GGAACAATGAAAATGGTGGA+GGG | 0.652681 | 7_3:-82793900 | Msa1130640:CDS |
| GTACTTCATCAATCAATGGA+CGG | 0.654655 | 7_3:-82793672 | Msa1130640:CDS |
| TTATTCAAAGACAGTGACAG+AGG | 0.655380 | 7_3:-82793941 | Msa1130640:CDS |
| TATGCTAAAGAATCGTTGAG+GGG | 0.679306 | 7_3:+82794201 | None:intergenic |
| CACCTCCTACAACCCCACAT+AGG | 0.680826 | 7_3:+82793860 | None:intergenic |
| GTGAAGCGTCTCATTTACAC+CGG | 0.695408 | 7_3:-82794300 | Msa1130640:CDS |
| TGTGGGAACAATGAAAATGG+TGG | 0.725840 | 7_3:-82793904 | Msa1130640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATACAAAAAATCTATCA+TGG | - | chr7_3:82794197-82794216 | Msa1130640:CDS | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | - | chr7_3:82794387-82794406 | Msa1130640:intron | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | - | chr7_3:82794914-82794933 | Msa1130640:intron | 15.0% |
| !! | TTAATACAAAAAATCTATCA+TGG | - | chr7_3:82794197-82794216 | Msa1130640:CDS | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | - | chr7_3:82794387-82794406 | Msa1130640:intron | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | - | chr7_3:82794914-82794933 | Msa1130640:intron | 15.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | - | chr7_3:82793950-82793969 | Msa1130640:CDS | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | + | chr7_3:82794117-82794136 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | + | chr7_3:82794118-82794137 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | - | chr7_3:82794386-82794405 | Msa1130640:intron | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | + | chr7_3:82794428-82794447 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | - | chr7_3:82794435-82794454 | Msa1130640:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | + | chr7_3:82794444-82794463 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | - | chr7_3:82794446-82794465 | Msa1130640:intron | 20.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | - | chr7_3:82793950-82793969 | Msa1130640:CDS | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | + | chr7_3:82794117-82794136 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | + | chr7_3:82794118-82794137 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | - | chr7_3:82794386-82794405 | Msa1130640:intron | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | + | chr7_3:82794428-82794447 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | - | chr7_3:82794435-82794454 | Msa1130640:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | + | chr7_3:82794444-82794463 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | - | chr7_3:82794446-82794465 | Msa1130640:intron | 20.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | + | chr7_3:82793941-82793960 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | - | chr7_3:82793968-82793987 | Msa1130640:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | - | chr7_3:82793973-82793992 | Msa1130640:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | + | chr7_3:82794055-82794074 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | + | chr7_3:82794758-82794777 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | - | chr7_3:82794764-82794783 | Msa1130640:intron | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | - | chr7_3:82794835-82794854 | Msa1130640:intron | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | + | chr7_3:82794843-82794862 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | - | chr7_3:82794889-82794908 | Msa1130640:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | - | chr7_3:82794930-82794949 | Msa1130640:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | - | chr7_3:82795147-82795166 | Msa1130640:intron | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | - | chr7_3:82795148-82795167 | Msa1130640:intron | 25.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | + | chr7_3:82793941-82793960 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | - | chr7_3:82793968-82793987 | Msa1130640:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | - | chr7_3:82793973-82793992 | Msa1130640:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | + | chr7_3:82794055-82794074 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | + | chr7_3:82794758-82794777 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | - | chr7_3:82794764-82794783 | Msa1130640:intron | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | - | chr7_3:82794835-82794854 | Msa1130640:intron | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | + | chr7_3:82794843-82794862 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | - | chr7_3:82794889-82794908 | Msa1130640:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | - | chr7_3:82794930-82794949 | Msa1130640:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | - | chr7_3:82795147-82795166 | Msa1130640:intron | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | - | chr7_3:82795148-82795167 | Msa1130640:intron | 25.0% |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | - | chr7_3:82793615-82793634 | Msa1130640:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | + | chr7_3:82793747-82793766 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | + | chr7_3:82793748-82793767 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | - | chr7_3:82793858-82793877 | Msa1130640:CDS | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | + | chr7_3:82793940-82793959 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | - | chr7_3:82793998-82794017 | Msa1130640:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | - | chr7_3:82794007-82794026 | Msa1130640:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | + | chr7_3:82794326-82794345 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | + | chr7_3:82794424-82794443 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | - | chr7_3:82794513-82794532 | Msa1130640:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | - | chr7_3:82794660-82794679 | Msa1130640:intron | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | - | chr7_3:82794674-82794693 | Msa1130640:intron | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | + | chr7_3:82794704-82794723 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | + | chr7_3:82794705-82794724 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | + | chr7_3:82794732-82794751 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | - | chr7_3:82794892-82794911 | Msa1130640:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | - | chr7_3:82795111-82795130 | Msa1130640:CDS | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | - | chr7_3:82795146-82795165 | Msa1130640:intron | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | - | chr7_3:82795225-82795244 | Msa1130640:intron | 30.0% |
| TGCAATCATTAACTGAATTC+TGG | + | chr7_3:82795318-82795337 | None:intergenic | 30.0% | |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | - | chr7_3:82793615-82793634 | Msa1130640:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | + | chr7_3:82793747-82793766 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | + | chr7_3:82793748-82793767 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | - | chr7_3:82793858-82793877 | Msa1130640:CDS | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | + | chr7_3:82793940-82793959 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | - | chr7_3:82793998-82794017 | Msa1130640:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | - | chr7_3:82794007-82794026 | Msa1130640:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | + | chr7_3:82794326-82794345 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | + | chr7_3:82794424-82794443 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | - | chr7_3:82794513-82794532 | Msa1130640:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | - | chr7_3:82794660-82794679 | Msa1130640:intron | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | - | chr7_3:82794674-82794693 | Msa1130640:intron | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | + | chr7_3:82794704-82794723 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | + | chr7_3:82794705-82794724 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | + | chr7_3:82794732-82794751 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | - | chr7_3:82794892-82794911 | Msa1130640:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | - | chr7_3:82795111-82795130 | Msa1130640:CDS | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | - | chr7_3:82795146-82795165 | Msa1130640:intron | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | - | chr7_3:82795225-82795244 | Msa1130640:intron | 30.0% |
| TGCAATCATTAACTGAATTC+TGG | + | chr7_3:82795318-82795337 | None:intergenic | 30.0% | |
| CAACTAGATATCCAAACACA+TGG | + | chr7_3:82793964-82793983 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | + | chr7_3:82794099-82794118 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | + | chr7_3:82794165-82794184 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | - | chr7_3:82794163-82794182 | Msa1130640:intron | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | + | chr7_3:82794243-82794262 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | - | chr7_3:82794253-82794272 | Msa1130640:CDS | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | + | chr7_3:82794257-82794276 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | - | chr7_3:82794256-82794275 | Msa1130640:CDS | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | - | chr7_3:82794257-82794276 | Msa1130640:CDS | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | + | chr7_3:82794309-82794328 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | + | chr7_3:82794337-82794356 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | + | chr7_3:82794350-82794369 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | - | chr7_3:82794573-82794592 | Msa1130640:intron | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | - | chr7_3:82794638-82794657 | Msa1130640:intron | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | + | chr7_3:82794703-82794722 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | - | chr7_3:82794726-82794745 | Msa1130640:intron | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | - | chr7_3:82794960-82794979 | Msa1130640:intron | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | - | chr7_3:82794980-82794999 | Msa1130640:CDS | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | + | chr7_3:82795180-82795199 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | - | chr7_3:82795203-82795222 | Msa1130640:intron | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | - | chr7_3:82795229-82795248 | Msa1130640:intron | 35.0% | |
| ATCGTCTTTATACAGTCTAG+TGG | - | chr7_3:82795357-82795376 | Msa1130640:exon | 35.0% | |
| TCGTCTTTATACAGTCTAGT+GGG | - | chr7_3:82795358-82795377 | Msa1130640:exon | 35.0% | |
| CAACTAGATATCCAAACACA+TGG | + | chr7_3:82793964-82793983 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | + | chr7_3:82794099-82794118 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | + | chr7_3:82794165-82794184 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | - | chr7_3:82794163-82794182 | Msa1130640:intron | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | + | chr7_3:82794243-82794262 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | - | chr7_3:82794253-82794272 | Msa1130640:CDS | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | + | chr7_3:82794257-82794276 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | - | chr7_3:82794256-82794275 | Msa1130640:CDS | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | - | chr7_3:82794257-82794276 | Msa1130640:CDS | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | + | chr7_3:82794309-82794328 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | + | chr7_3:82794337-82794356 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | + | chr7_3:82794350-82794369 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | - | chr7_3:82794573-82794592 | Msa1130640:intron | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | - | chr7_3:82794638-82794657 | Msa1130640:intron | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | + | chr7_3:82794703-82794722 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | - | chr7_3:82794726-82794745 | Msa1130640:intron | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | - | chr7_3:82794960-82794979 | Msa1130640:intron | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | - | chr7_3:82794980-82794999 | Msa1130640:CDS | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | + | chr7_3:82795180-82795199 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | - | chr7_3:82795203-82795222 | Msa1130640:intron | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | - | chr7_3:82795229-82795248 | Msa1130640:intron | 35.0% | |
| GCAAATCACACACTTTACAG+AGG | - | chr7_3:82793762-82793781 | Msa1130640:CDS | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | - | chr7_3:82793774-82793793 | Msa1130640:CDS | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | - | chr7_3:82793816-82793835 | Msa1130640:CDS | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | + | chr7_3:82793820-82793839 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | - | chr7_3:82793870-82793889 | Msa1130640:CDS | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | - | chr7_3:82793871-82793890 | Msa1130640:CDS | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | - | chr7_3:82794072-82794091 | Msa1130640:intron | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | - | chr7_3:82794080-82794099 | Msa1130640:intron | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | + | chr7_3:82794084-82794103 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | + | chr7_3:82794308-82794327 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | - | chr7_3:82794344-82794363 | Msa1130640:CDS | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | - | chr7_3:82794574-82794593 | Msa1130640:intron | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | + | chr7_3:82794623-82794642 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | - | chr7_3:82794637-82794656 | Msa1130640:intron | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | - | chr7_3:82794979-82794998 | Msa1130640:CDS | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | - | chr7_3:82794994-82795013 | Msa1130640:CDS | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | - | chr7_3:82794997-82795016 | Msa1130640:CDS | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | - | chr7_3:82795001-82795020 | Msa1130640:CDS | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | + | chr7_3:82795087-82795106 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | + | chr7_3:82795088-82795107 | None:intergenic | 40.0% | |
| GCAAATCACACACTTTACAG+AGG | - | chr7_3:82793762-82793781 | Msa1130640:CDS | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | - | chr7_3:82793774-82793793 | Msa1130640:CDS | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | - | chr7_3:82793816-82793835 | Msa1130640:CDS | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | + | chr7_3:82793820-82793839 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | - | chr7_3:82793870-82793889 | Msa1130640:CDS | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | - | chr7_3:82793871-82793890 | Msa1130640:CDS | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | - | chr7_3:82794072-82794091 | Msa1130640:intron | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | - | chr7_3:82794080-82794099 | Msa1130640:intron | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | + | chr7_3:82794084-82794103 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | + | chr7_3:82794308-82794327 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | - | chr7_3:82794344-82794363 | Msa1130640:CDS | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | - | chr7_3:82794574-82794593 | Msa1130640:intron | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | + | chr7_3:82794623-82794642 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | - | chr7_3:82794637-82794656 | Msa1130640:intron | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | - | chr7_3:82794979-82794998 | Msa1130640:CDS | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | - | chr7_3:82794994-82795013 | Msa1130640:CDS | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | - | chr7_3:82794997-82795016 | Msa1130640:CDS | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | - | chr7_3:82795001-82795020 | Msa1130640:CDS | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | + | chr7_3:82795087-82795106 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | + | chr7_3:82795088-82795107 | None:intergenic | 40.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | - | chr7_3:82793551-82793570 | Msa1130640:three_prime_UTR | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | - | chr7_3:82793564-82793583 | Msa1130640:three_prime_UTR | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | + | chr7_3:82793650-82793669 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | - | chr7_3:82793735-82793754 | Msa1130640:CDS | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | + | chr7_3:82793741-82793760 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | + | chr7_3:82793744-82793763 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | - | chr7_3:82793777-82793796 | Msa1130640:CDS | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | + | chr7_3:82794236-82794255 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | + | chr7_3:82794301-82794320 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | - | chr7_3:82794538-82794557 | Msa1130640:intron | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | - | chr7_3:82794539-82794558 | Msa1130640:intron | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | - | chr7_3:82794579-82794598 | Msa1130640:intron | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | - | chr7_3:82794601-82794620 | Msa1130640:intron | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | + | chr7_3:82794646-82794665 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | - | chr7_3:82794643-82794662 | Msa1130640:intron | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | - | chr7_3:82795000-82795019 | Msa1130640:CDS | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | - | chr7_3:82795005-82795024 | Msa1130640:CDS | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | - | chr7_3:82795028-82795047 | Msa1130640:CDS | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | - | chr7_3:82795066-82795085 | Msa1130640:CDS | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | - | chr7_3:82795125-82795144 | Msa1130640:intron | 45.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | - | chr7_3:82793551-82793570 | Msa1130640:three_prime_UTR | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | - | chr7_3:82793564-82793583 | Msa1130640:three_prime_UTR | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | + | chr7_3:82793650-82793669 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | - | chr7_3:82793735-82793754 | Msa1130640:CDS | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | + | chr7_3:82793741-82793760 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | + | chr7_3:82793744-82793763 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | - | chr7_3:82793777-82793796 | Msa1130640:CDS | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | + | chr7_3:82794236-82794255 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | + | chr7_3:82794301-82794320 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | - | chr7_3:82794538-82794557 | Msa1130640:intron | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | - | chr7_3:82794539-82794558 | Msa1130640:intron | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | - | chr7_3:82794579-82794598 | Msa1130640:intron | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | - | chr7_3:82794601-82794620 | Msa1130640:intron | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | + | chr7_3:82794646-82794665 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | - | chr7_3:82794643-82794662 | Msa1130640:intron | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | - | chr7_3:82795000-82795019 | Msa1130640:CDS | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | - | chr7_3:82795005-82795024 | Msa1130640:CDS | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | - | chr7_3:82795028-82795047 | Msa1130640:CDS | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | - | chr7_3:82795066-82795085 | Msa1130640:CDS | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | - | chr7_3:82795125-82795144 | Msa1130640:intron | 45.0% | |
| GATGCGGGTTCATGGATCAA+GGG | + | chr7_3:82793925-82793944 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | + | chr7_3:82793926-82793945 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | + | chr7_3:82793933-82793952 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | - | chr7_3:82795008-82795027 | Msa1130640:CDS | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | - | chr7_3:82795027-82795046 | Msa1130640:CDS | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | - | chr7_3:82795029-82795048 | Msa1130640:CDS | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | - | chr7_3:82795036-82795055 | Msa1130640:CDS | 50.0% | |
| GATGCGGGTTCATGGATCAA+GGG | + | chr7_3:82793925-82793944 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | + | chr7_3:82793926-82793945 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | + | chr7_3:82793933-82793952 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | - | chr7_3:82795008-82795027 | Msa1130640:CDS | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | - | chr7_3:82795027-82795046 | Msa1130640:CDS | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | - | chr7_3:82795029-82795048 | Msa1130640:CDS | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | - | chr7_3:82795036-82795055 | Msa1130640:CDS | 50.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | - | chr7_3:82793573-82793592 | Msa1130640:three_prime_UTR | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | + | chr7_3:82793920-82793939 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | - | chr7_3:82793927-82793946 | Msa1130640:CDS | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | - | chr7_3:82795011-82795030 | Msa1130640:CDS | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | - | chr7_3:82795039-82795058 | Msa1130640:CDS | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | + | chr7_3:82795044-82795063 | None:intergenic | 55.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | - | chr7_3:82793573-82793592 | Msa1130640:three_prime_UTR | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | + | chr7_3:82793920-82793939 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | - | chr7_3:82793927-82793946 | Msa1130640:CDS | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | - | chr7_3:82795011-82795030 | Msa1130640:CDS | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | - | chr7_3:82795039-82795058 | Msa1130640:CDS | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | + | chr7_3:82795044-82795063 | None:intergenic | 55.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | + | chr7_3:82795079-82795098 | None:intergenic | 60.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | + | chr7_3:82795079-82795098 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82793546 | 82795377 | 82793546 | ID=Msa1130640;Name=Msa1130640 |
| chr7_3 | mRNA | 82793546 | 82795377 | 82793546 | ID=Msa1130640-mRNA-1;Parent=Msa1130640;Name=Msa1130640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=9|1|0.75|1|1|1|4|48|292 |
| chr7_3 | exon | 82793546 | 82793971 | 82793546 | ID=Msa1130640-mRNA-1:exon:24535;Parent=Msa1130640-mRNA-1 |
| chr7_3 | exon | 82794176 | 82794394 | 82794176 | ID=Msa1130640-mRNA-1:exon:24534;Parent=Msa1130640-mRNA-1 |
| chr7_3 | exon | 82794975 | 82795141 | 82794975 | ID=Msa1130640-mRNA-1:exon:24533;Parent=Msa1130640-mRNA-1 |
| chr7_3 | exon | 82795254 | 82795377 | 82795254 | ID=Msa1130640-mRNA-1:exon:24532;Parent=Msa1130640-mRNA-1 |
| chr7_3 | five_prime_UTR | 82795369 | 82795377 | 82795369 | ID=Msa1130640-mRNA-1:five_prime_utr;Parent=Msa1130640-mRNA-1 |
| chr7_3 | CDS | 82795254 | 82795368 | 82795254 | ID=Msa1130640-mRNA-1:cds;Parent=Msa1130640-mRNA-1 |
| chr7_3 | CDS | 82794975 | 82795141 | 82794975 | ID=Msa1130640-mRNA-1:cds;Parent=Msa1130640-mRNA-1 |
| chr7_3 | CDS | 82794176 | 82794394 | 82794176 | ID=Msa1130640-mRNA-1:cds;Parent=Msa1130640-mRNA-1 |
| chr7_3 | CDS | 82793594 | 82793971 | 82793594 | ID=Msa1130640-mRNA-1:cds;Parent=Msa1130640-mRNA-1 |
| chr7_3 | three_prime_UTR | 82793546 | 82793593 | 82793546 | ID=Msa1130640-mRNA-1:three_prime_utr;Parent=Msa1130640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
