Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130340 | XP_003626557.1 | 87.430 | 358 | 27 | 1 | 1 | 358 | 1 | 340 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130340 | sp|Q7PCC4|ANRCH_VITVI | 31.638 | 354 | 209 | 10 | 8 | 358 | 13 | 336 | 3.78e-50 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130340 | G7L425 | 87.430 | 358 | 27 | 1 | 1 | 358 | 1 | 340 | 0.0 | 642 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0437340 | Msa1130340 | 0.955210 | 5.118579e-113 | -8.615850e-47 |
| Msa1037720 | Msa1130340 | 0.861415 | 1.042937e-63 | -8.615850e-47 |
| Msa1130340 | Msa1130640 | 0.963253 | 7.364394e-122 | -8.615850e-47 |
| Msa1130340 | Msa1427790 | 0.933434 | 1.887673e-95 | -8.615850e-47 |
| Msa1130340 | Msa1441210 | 0.949255 | 1.841981e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130340 | MtrunA17_Chr7g0275521 | 87.430 | 358 | 27 | 1 | 1 | 358 | 1 | 340 | 0.0 | 642 |
| Msa1130340 | MtrunA17_Chr2g0282001 | 56.944 | 360 | 132 | 5 | 1 | 358 | 1 | 339 | 4.35e-140 | 401 |
| Msa1130340 | MtrunA17_Chr2g0281991 | 55.556 | 360 | 137 | 5 | 1 | 358 | 2 | 340 | 4.06e-137 | 394 |
| Msa1130340 | MtrunA17_Chr2g0282011 | 55.153 | 359 | 138 | 5 | 1 | 357 | 2 | 339 | 1.24e-127 | 370 |
| Msa1130340 | MtrunA17_Chr7g0245741 | 31.285 | 358 | 207 | 8 | 2 | 356 | 3 | 324 | 2.58e-48 | 166 |
| Msa1130340 | MtrunA17_Chr7g0245731 | 30.986 | 355 | 206 | 8 | 2 | 353 | 53 | 371 | 3.66e-48 | 166 |
| Msa1130340 | MtrunA17_Chr7g0245671 | 31.921 | 354 | 209 | 9 | 6 | 358 | 7 | 329 | 7.30e-48 | 164 |
| Msa1130340 | MtrunA17_Chr7g0245691 | 33.426 | 359 | 206 | 10 | 2 | 358 | 3 | 330 | 1.24e-47 | 164 |
| Msa1130340 | MtrunA17_Chr1g0155411 | 31.250 | 352 | 208 | 7 | 7 | 358 | 8 | 325 | 3.46e-47 | 163 |
| Msa1130340 | MtrunA17_Chr7g0245641 | 32.782 | 363 | 202 | 11 | 2 | 358 | 40 | 366 | 4.50e-46 | 160 |
| Msa1130340 | MtrunA17_Chr4g0048961 | 30.812 | 357 | 208 | 9 | 6 | 356 | 13 | 336 | 4.47e-45 | 157 |
| Msa1130340 | MtrunA17_Chr4g0042101 | 31.728 | 353 | 205 | 13 | 6 | 351 | 23 | 346 | 1.31e-43 | 154 |
| Msa1130340 | MtrunA17_Chr1g0155431 | 29.885 | 348 | 206 | 8 | 7 | 350 | 8 | 321 | 8.89e-43 | 151 |
| Msa1130340 | MtrunA17_Chr7g0245631 | 29.775 | 356 | 215 | 10 | 2 | 356 | 3 | 324 | 2.44e-42 | 150 |
| Msa1130340 | MtrunA17_Chr4g0010991 | 30.423 | 355 | 211 | 9 | 7 | 358 | 8 | 329 | 2.50e-39 | 142 |
| Msa1130340 | MtrunA17_Chr7g0245711 | 28.931 | 318 | 176 | 8 | 44 | 353 | 8 | 283 | 6.64e-34 | 126 |
| Msa1130340 | MtrunA17_Chr2g0331211 | 30.812 | 357 | 202 | 14 | 6 | 358 | 4 | 319 | 1.34e-33 | 127 |
| Msa1130340 | MtrunA17_Chr3g0077231 | 31.399 | 293 | 179 | 9 | 7 | 299 | 6 | 276 | 2.73e-30 | 117 |
| Msa1130340 | MtrunA17_Chr8g0364051 | 30.794 | 315 | 177 | 12 | 7 | 314 | 8 | 288 | 5.29e-30 | 117 |
| Msa1130340 | MtrunA17_Chr3g0106111 | 28.451 | 355 | 207 | 12 | 7 | 356 | 5 | 317 | 8.02e-30 | 116 |
| Msa1130340 | MtrunA17_Chr3g0077221 | 29.773 | 309 | 189 | 10 | 7 | 314 | 10 | 291 | 1.11e-29 | 116 |
| Msa1130340 | MtrunA17_Chr4g0039321 | 31.000 | 300 | 171 | 11 | 7 | 299 | 9 | 279 | 3.17e-29 | 115 |
| Msa1130340 | MtrunA17_Chr8g0363831 | 32.166 | 314 | 174 | 14 | 7 | 314 | 9 | 289 | 4.16e-28 | 112 |
| Msa1130340 | MtrunA17_Chr4g0002661 | 30.903 | 288 | 174 | 10 | 6 | 291 | 12 | 276 | 4.72e-28 | 112 |
| Msa1130340 | MtrunA17_Chr5g0431311 | 29.514 | 288 | 181 | 9 | 7 | 293 | 5 | 271 | 4.79e-28 | 111 |
| Msa1130340 | MtrunA17_Chr4g0039311 | 30.068 | 296 | 179 | 12 | 7 | 299 | 11 | 281 | 1.74e-27 | 110 |
| Msa1130340 | MtrunA17_Chr2g0291541 | 31.271 | 291 | 169 | 12 | 7 | 289 | 10 | 277 | 8.45e-27 | 108 |
| Msa1130340 | MtrunA17_Chr2g0333781 | 28.571 | 287 | 179 | 9 | 7 | 293 | 20 | 280 | 8.86e-26 | 105 |
| Msa1130340 | MtrunA17_Chr5g0423551 | 26.966 | 356 | 222 | 13 | 4 | 358 | 1 | 319 | 1.52e-25 | 104 |
| Msa1130340 | MtrunA17_Chr4g0001321 | 28.179 | 291 | 175 | 11 | 7 | 293 | 17 | 277 | 2.82e-25 | 104 |
| Msa1130340 | MtrunA17_Chr4g0002961 | 29.210 | 291 | 175 | 10 | 6 | 291 | 12 | 276 | 2.43e-24 | 101 |
| Msa1130340 | MtrunA17_Chr5g0411071 | 22.857 | 280 | 182 | 9 | 7 | 285 | 12 | 258 | 1.13e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130340 | AT4G27250.1 | 31.549 | 355 | 199 | 9 | 8 | 349 | 14 | 337 | 7.22e-47 | 163 |
| Msa1130340 | AT4G27250.2 | 31.268 | 355 | 190 | 10 | 8 | 349 | 14 | 327 | 3.99e-45 | 158 |
| Msa1130340 | AT5G42800.1 | 28.977 | 352 | 216 | 7 | 7 | 358 | 8 | 325 | 3.71e-42 | 151 |
| Msa1130340 | AT1G61720.1 | 30.636 | 346 | 211 | 10 | 6 | 350 | 12 | 329 | 3.91e-41 | 147 |
| Msa1130340 | AT2G45400.1 | 30.423 | 355 | 214 | 9 | 7 | 358 | 40 | 364 | 4.96e-39 | 142 |
| Msa1130340 | AT1G09510.1 | 33.449 | 287 | 171 | 6 | 7 | 293 | 8 | 274 | 1.84e-38 | 140 |
| Msa1130340 | AT1G09500.3 | 34.146 | 287 | 166 | 9 | 7 | 291 | 8 | 273 | 6.68e-38 | 137 |
| Msa1130340 | AT1G09500.1 | 34.146 | 287 | 166 | 9 | 7 | 291 | 8 | 273 | 4.29e-37 | 136 |
| Msa1130340 | AT2G45400.2 | 32.414 | 290 | 179 | 7 | 7 | 293 | 40 | 315 | 1.16e-36 | 135 |
| Msa1130340 | AT1G09490.1 | 32.069 | 290 | 171 | 8 | 7 | 293 | 8 | 274 | 9.68e-36 | 132 |
| Msa1130340 | AT4G35420.1 | 28.809 | 361 | 211 | 14 | 2 | 358 | 3 | 321 | 6.67e-35 | 130 |
| Msa1130340 | AT1G09480.2 | 32.281 | 285 | 173 | 7 | 7 | 291 | 8 | 272 | 7.62e-35 | 130 |
| Msa1130340 | AT1G09480.1 | 32.281 | 285 | 173 | 7 | 7 | 291 | 55 | 319 | 1.98e-34 | 130 |
| Msa1130340 | AT1G66800.1 | 33.564 | 289 | 160 | 11 | 7 | 291 | 8 | 268 | 3.79e-34 | 128 |
| Msa1130340 | AT5G19440.1 | 32.770 | 296 | 161 | 10 | 7 | 293 | 10 | 276 | 2.15e-33 | 126 |
| Msa1130340 | AT1G51410.1 | 32.056 | 287 | 175 | 7 | 7 | 293 | 9 | 275 | 6.49e-32 | 122 |
| Msa1130340 | AT2G45400.3 | 28.152 | 341 | 208 | 10 | 19 | 358 | 3 | 307 | 1.12e-27 | 110 |
| Msa1130340 | AT2G45400.4 | 33.945 | 218 | 137 | 4 | 7 | 222 | 40 | 252 | 7.77e-27 | 107 |
| Msa1130340 | AT2G02400.1 | 29.066 | 289 | 179 | 10 | 7 | 293 | 6 | 270 | 1.25e-26 | 108 |
| Msa1130340 | AT5G58490.1 | 30.068 | 296 | 169 | 11 | 7 | 293 | 9 | 275 | 2.14e-26 | 107 |
| Msa1130340 | AT1G68540.1 | 29.730 | 296 | 178 | 10 | 4 | 293 | 1 | 272 | 4.70e-26 | 106 |
| Msa1130340 | AT1G15950.6 | 30.375 | 293 | 166 | 11 | 7 | 293 | 13 | 273 | 5.81e-26 | 105 |
| Msa1130340 | AT1G15950.4 | 30.375 | 293 | 166 | 11 | 7 | 293 | 13 | 273 | 8.96e-26 | 105 |
| Msa1130340 | AT1G15950.5 | 30.375 | 293 | 166 | 11 | 7 | 293 | 13 | 273 | 9.02e-26 | 105 |
| Msa1130340 | AT1G80820.2 | 29.758 | 289 | 173 | 9 | 7 | 293 | 8 | 268 | 1.30e-25 | 104 |
| Msa1130340 | AT1G15950.2 | 30.450 | 289 | 171 | 10 | 7 | 293 | 13 | 273 | 1.45e-25 | 105 |
| Msa1130340 | AT1G15950.3 | 30.375 | 293 | 166 | 11 | 7 | 293 | 13 | 273 | 2.51e-25 | 105 |
| Msa1130340 | AT1G15950.1 | 30.375 | 293 | 166 | 11 | 7 | 293 | 13 | 273 | 2.51e-25 | 105 |
| Msa1130340 | AT2G33590.1 | 30.100 | 299 | 165 | 11 | 6 | 292 | 8 | 274 | 3.33e-25 | 104 |
| Msa1130340 | AT1G80820.1 | 30.137 | 292 | 168 | 11 | 7 | 293 | 8 | 268 | 5.25e-25 | 103 |
| Msa1130340 | AT1G25460.1 | 27.778 | 360 | 214 | 12 | 4 | 358 | 1 | 319 | 3.79e-24 | 101 |
| Msa1130340 | AT1G76470.1 | 30.272 | 294 | 179 | 11 | 1 | 290 | 1 | 272 | 7.56e-24 | 100 |
| Msa1130340 | AT2G33600.1 | 30.769 | 286 | 158 | 10 | 6 | 281 | 8 | 263 | 2.02e-21 | 94.0 |
| Msa1130340 | AT1G09500.2 | 30.078 | 256 | 154 | 10 | 39 | 291 | 6 | 239 | 5.87e-21 | 92.0 |
| Msa1130340 | AT1G09490.2 | 27.132 | 258 | 162 | 8 | 39 | 293 | 9 | 243 | 2.81e-19 | 87.4 |
| Msa1130340 | AT4G33360.3 | 24.832 | 298 | 173 | 12 | 6 | 293 | 2 | 258 | 9.28e-14 | 71.6 |
| Msa1130340 | AT4G33360.2 | 24.832 | 298 | 173 | 12 | 6 | 293 | 14 | 270 | 9.31e-14 | 71.6 |
| Msa1130340 | AT4G33360.1 | 24.832 | 298 | 173 | 12 | 6 | 293 | 14 | 270 | 1.02e-13 | 72.0 |
| Msa1130340 | AT2G23910.3 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 1.45e-12 | 67.8 |
| Msa1130340 | AT2G23910.2 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 1.50e-12 | 67.8 |
| Msa1130340 | AT2G23910.1 | 22.464 | 276 | 184 | 10 | 8 | 281 | 11 | 258 | 1.59e-12 | 67.8 |
Find 76 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATGACGCTAAGATGATTT+TGG | 0.198390 | 7_3:+82485486 | Msa1130340:CDS |
| TGACTTTGAGGCTGCAATTA+AGG | 0.212022 | 7_3:+82483784 | Msa1130340:CDS |
| CCCCACTTCATATCCTTCTT+TGG | 0.223576 | 7_3:-82485427 | None:intergenic |
| GCAATCATTAAACTGAATTC+TGG | 0.229249 | 7_3:-82485229 | None:intergenic |
| GTACCATGATGCTTATCTTA+AGG | 0.339878 | 7_3:+82484640 | Msa1130340:CDS |
| ATTACTGAAGCATCGCTTGC+TGG | 0.342941 | 7_3:+82484452 | Msa1130340:CDS |
| GACTTTGAGGCTGCAATTAA+GGG | 0.352832 | 7_3:+82483785 | Msa1130340:CDS |
| GTATGCGTCACAGGTGCTTC+TGG | 0.352861 | 7_3:+82483487 | Msa1130340:CDS |
| TTACAACTCAATTGACTTTG+AGG | 0.381158 | 7_3:+82483772 | Msa1130340:CDS |
| GACTGGTTTCAATGATATAA+TGG | 0.390602 | 7_3:+82484574 | Msa1130340:CDS |
| TAACCTGAGATGCGGGTTCA+TGG | 0.394734 | 7_3:-82483844 | None:intergenic |
| CTTTACAGAGGATGAGTCTA+AGG | 0.400084 | 7_3:+82483688 | Msa1130340:intron |
| TCCACAATCACAAGACAAAC+TGG | 0.405298 | 7_3:+82483730 | Msa1130340:CDS |
| CCAGTCCCATCATCTTTCAT+TGG | 0.410585 | 7_3:-82484557 | None:intergenic |
| AGTCTCCTATGTGGGGTTGT+AGG | 0.417874 | 7_3:+82484950 | Msa1130340:CDS |
| ATATAATGGATGAAACTTGC+TGG | 0.423061 | 7_3:+82484588 | Msa1130340:CDS |
| GATCCATGAACCCGCATCTC+AGG | 0.456989 | 7_3:+82483841 | Msa1130340:CDS |
| GCTTCTCCAATGAAAGATGA+TGG | 0.461395 | 7_3:+82484551 | Msa1130340:CDS |
| CAATGAAAATGGTGGAGGGT+TGG | 0.467224 | 7_3:+82484919 | Msa1130340:CDS |
| ATGTGTAAGGTATGCGTCAC+AGG | 0.467565 | 7_3:+82483478 | Msa1130340:CDS |
| AGCTGTGGGAACAATGAAAA+TGG | 0.468232 | 7_3:+82484908 | Msa1130340:CDS |
| TGCAAATGGACGCAAATCAC+TGG | 0.474718 | 7_3:+82485039 | Msa1130340:CDS |
| TGAAAATGGTGGAGGGTTGG+AGG | 0.475120 | 7_3:+82484922 | Msa1130340:CDS |
| CATATCACAGAAAATGCAAA+TGG | 0.475143 | 7_3:+82485025 | Msa1130340:CDS |
| AGGTGGTAAGTCTCCTATGT+GGG | 0.493459 | 7_3:+82484942 | Msa1130340:CDS |
| ACCAGTTTGTCTTGTGATTG+TGG | 0.493902 | 7_3:-82483731 | None:intergenic |
| AATGTGCATGTATGAGAAGA+AGG | 0.508763 | 7_3:-82485278 | None:intergenic |
| GAAAGTACTTCATCAATCAA+TGG | 0.516637 | 7_3:+82485139 | Msa1130340:CDS |
| CATGTATGAGAAGAAGGAAT+AGG | 0.522465 | 7_3:-82485272 | None:intergenic |
| TGTCAAATGTGCTAGAAGAA+TGG | 0.523502 | 7_3:+82485516 | Msa1130340:CDS |
| TTACTGAAGCATCGCTTGCT+GGG | 0.524780 | 7_3:+82484453 | Msa1130340:CDS |
| AGATGCGGGTTCATGGATCA+AGG | 0.529187 | 7_3:-82483837 | None:intergenic |
| GATACAAATTGCAACGCTAC+CGG | 0.530650 | 7_3:-82484999 | None:intergenic |
| GTCAAATGTGCTAGAAGAAT+GGG | 0.531939 | 7_3:+82485517 | Msa1130340:CDS |
| GGTGATGGAAGCAATGTGTA+AGG | 0.539971 | 7_3:+82483465 | Msa1130340:exon |
| TATAATTTAACCTGAGATGC+GGG | 0.540168 | 7_3:-82483851 | None:intergenic |
| ATATGCTAAAGAATCGTTGA+GGG | 0.549055 | 7_3:-82484615 | None:intergenic |
| AAATGGTGGAGGGTTGGAGG+TGG | 0.552531 | 7_3:+82484925 | Msa1130340:CDS |
| TGCAACGCTACCGGGTGTGA+AGG | 0.555436 | 7_3:-82484990 | None:intergenic |
| GAGGTGGTAAGTCTCCTATG+TGG | 0.557624 | 7_3:+82484941 | Msa1130340:CDS |
| ATACAAATTGCAACGCTACC+GGG | 0.561526 | 7_3:-82484998 | None:intergenic |
| CTCCTATGTGGGGTTGTAGG+AGG | 0.562515 | 7_3:+82484953 | Msa1130340:CDS |
| AGAAGCAGATACAACAGATC+CGG | 0.565206 | 7_3:-82484534 | None:intergenic |
| CTTCTCCAATGAAAGATGAT+GGG | 0.569500 | 7_3:+82484552 | Msa1130340:CDS |
| ATATGCAGATAGGCCAAAGA+AGG | 0.573819 | 7_3:+82485414 | Msa1130340:intron |
| GCCAAAGAAGGATATGAAGT+GGG | 0.575408 | 7_3:+82485426 | Msa1130340:CDS |
| GCTATGTATTGTAAGAGAGC+GGG | 0.575478 | 7_3:+82484488 | Msa1130340:CDS |
| TGAAGCTCATATATTCTGCA+TGG | 0.578726 | 7_3:+82485117 | Msa1130340:CDS |
| AGGAATATATGTTGAGCTGT+GGG | 0.579788 | 7_3:+82484894 | Msa1130340:CDS |
| GGGTTCATGGATCAAGGGTG+TGG | 0.581982 | 7_3:-82483831 | None:intergenic |
| GAGGAATATATGTTGAGCTG+TGG | 0.584405 | 7_3:+82484893 | Msa1130340:CDS |
| ACATCATCAACATGTACAAG+AGG | 0.587208 | 7_3:-82485091 | None:intergenic |
| TCAAGTCTCTGAGAGTTGCA+TGG | 0.594926 | 7_3:-82483561 | None:intergenic |
| GGGAACAATGAAAATGGTGG+AGG | 0.596591 | 7_3:+82484914 | Msa1130340:CDS |
| ATATAATTTAACCTGAGATG+CGG | 0.598236 | 7_3:-82483852 | None:intergenic |
| AATATGCTAAAGAATCGTTG+AGG | 0.599579 | 7_3:-82484616 | None:intergenic |
| TGCTATGTATTGTAAGAGAG+CGG | 0.604433 | 7_3:+82484487 | Msa1130340:CDS |
| CCAATGAAAGATGATGGGAC+TGG | 0.605272 | 7_3:+82484557 | Msa1130340:CDS |
| GTATTGTAAGAGAGCGGGAA+CGG | 0.611184 | 7_3:+82484493 | Msa1130340:CDS |
| GGCCAAAGAAGGATATGAAG+TGG | 0.614579 | 7_3:+82485425 | Msa1130340:CDS |
| GACCAGAAAAGGGAAGGTGA+TGG | 0.618651 | 7_3:+82483450 | None:intergenic |
| TTACCTTAAGATAAGCATCA+TGG | 0.622737 | 7_3:-82484643 | None:intergenic |
| TCAACAAAGCTATGTGACAA+AGG | 0.632597 | 7_3:+82485451 | Msa1130340:CDS |
| CCAAAGAAGGATATGAAGTG+GGG | 0.633636 | 7_3:+82485427 | Msa1130340:CDS |
| GGTGGTAAGTCTCCTATGTG+GGG | 0.640603 | 7_3:+82484943 | Msa1130340:CDS |
| TACAGAGGATGAGTCTAAGG+TGG | 0.642409 | 7_3:+82483691 | Msa1130340:intron |
| GATGCGGGTTCATGGATCAA+GGG | 0.646418 | 7_3:-82483836 | None:intergenic |
| ACTCTTCAATCCTTCACACC+CGG | 0.652288 | 7_3:+82484980 | Msa1130340:CDS |
| GGAACAATGAAAATGGTGGA+GGG | 0.652681 | 7_3:+82484915 | Msa1130340:CDS |
| GTACTTCATCAATCAATGGA+CGG | 0.654655 | 7_3:+82485143 | Msa1130340:CDS |
| TTATTCAAAGACAGTGACAG+AGG | 0.655380 | 7_3:+82484874 | Msa1130340:CDS |
| TATGCTAAAGAATCGTTGAG+GGG | 0.679306 | 7_3:-82484614 | None:intergenic |
| CAAAGAAGGATATGAAGTGG+GGG | 0.680278 | 7_3:+82485428 | Msa1130340:CDS |
| CACCTCCTACAACCCCACAT+AGG | 0.680826 | 7_3:-82484955 | None:intergenic |
| GTGAAGCGTCTCATTTACAC+CGG | 0.695408 | 7_3:+82484515 | Msa1130340:CDS |
| TGTGGGAACAATGAAAATGG+TGG | 0.725840 | 7_3:+82484911 | Msa1130340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATACAAAAAATCTATCA+TGG | + | chr7_3:82484111-82484130 | Msa1130340:intron | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | + | chr7_3:82484301-82484320 | Msa1130340:intron | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | + | chr7_3:82484828-82484847 | Msa1130340:intron | 15.0% |
| !! | TTAATACAAAAAATCTATCA+TGG | + | chr7_3:82484111-82484130 | Msa1130340:intron | 15.0% |
| !!! | TAAGAATAATTGATTTTGTA+GGG | + | chr7_3:82484301-82484320 | Msa1130340:intron | 15.0% |
| !!! | GTATTTGAATTTTATTGTAA+TGG | + | chr7_3:82484828-82484847 | Msa1130340:intron | 15.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | + | chr7_3:82483864-82483883 | Msa1130340:intron | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | - | chr7_3:82484031-82484050 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | - | chr7_3:82484032-82484051 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | + | chr7_3:82484300-82484319 | Msa1130340:intron | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | - | chr7_3:82484342-82484361 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | + | chr7_3:82484349-82484368 | Msa1130340:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | - | chr7_3:82484358-82484377 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | + | chr7_3:82484360-82484379 | Msa1130340:intron | 20.0% |
| !! | TTAAATTATATCCATGTGTT+TGG | + | chr7_3:82483864-82483883 | Msa1130340:intron | 20.0% |
| !! | CTAATATGATAATATAGCTA+GGG | - | chr7_3:82484031-82484050 | None:intergenic | 20.0% |
| !! | TCTAATATGATAATATAGCT+AGG | - | chr7_3:82484032-82484051 | None:intergenic | 20.0% |
| !!! | GTAAGAATAATTGATTTTGT+AGG | + | chr7_3:82484300-82484319 | Msa1130340:intron | 20.0% |
| !! | CATATGGTTAAAATTTGAAT+CGG | - | chr7_3:82484342-82484361 | None:intergenic | 20.0% |
| !!! | TTTTAACCATATGAAAACAT+AGG | + | chr7_3:82484349-82484368 | Msa1130340:intron | 20.0% |
| !!! | TTTTTACCTATGTTTTCATA+TGG | - | chr7_3:82484358-82484377 | None:intergenic | 20.0% |
| !! | TGAAAACATAGGTAAAAATA+AGG | + | chr7_3:82484360-82484379 | Msa1130340:intron | 20.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | - | chr7_3:82483855-82483874 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | + | chr7_3:82483882-82483901 | Msa1130340:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | + | chr7_3:82483887-82483906 | Msa1130340:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | - | chr7_3:82483969-82483988 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | - | chr7_3:82484672-82484691 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | + | chr7_3:82484678-82484697 | Msa1130340:intron | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | + | chr7_3:82484749-82484768 | Msa1130340:intron | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | - | chr7_3:82484757-82484776 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | + | chr7_3:82484803-82484822 | Msa1130340:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | + | chr7_3:82484844-82484863 | Msa1130340:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | + | chr7_3:82485061-82485080 | Msa1130340:CDS | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | + | chr7_3:82485062-82485081 | Msa1130340:CDS | 25.0% |
| ! | ATATAATTTAACCTGAGATG+CGG | - | chr7_3:82483855-82483874 | None:intergenic | 25.0% |
| ! | TTTGGATATCTAGTTGTATT+TGG | + | chr7_3:82483882-82483901 | Msa1130340:intron | 25.0% |
| ! | ATATCTAGTTGTATTTGGAT+AGG | + | chr7_3:82483887-82483906 | Msa1130340:intron | 25.0% |
| ! | TCTCACATTTAACAGAAATA+TGG | - | chr7_3:82483969-82483988 | None:intergenic | 25.0% |
| ! | ATCTTTGACAAATATGAGTT+TGG | - | chr7_3:82484672-82484691 | None:intergenic | 25.0% |
| ! | TATTTGTCAAAGATAGATCA+TGG | + | chr7_3:82484678-82484697 | Msa1130340:intron | 25.0% |
| ! | TTCTTCCGAAACTATTATTA+AGG | + | chr7_3:82484749-82484768 | Msa1130340:intron | 25.0% |
| ! | TGTCACCTTAATAATAGTTT+CGG | - | chr7_3:82484757-82484776 | None:intergenic | 25.0% |
| !! | ATGTCTTATCTCTTTTCAAT+TGG | + | chr7_3:82484803-82484822 | Msa1130340:intron | 25.0% |
| !!! | GTAATGGACTTGTTTTTTTA+AGG | + | chr7_3:82484844-82484863 | Msa1130340:intron | 25.0% |
| ! | GAGTTTGTACAAAAATTCTT+GGG | + | chr7_3:82485061-82485080 | Msa1130340:CDS | 25.0% |
| ! | AGTTTGTACAAAAATTCTTG+GGG | + | chr7_3:82485062-82485081 | Msa1130340:CDS | 25.0% |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | + | chr7_3:82483529-82483548 | Msa1130340:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | - | chr7_3:82483661-82483680 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | - | chr7_3:82483662-82483681 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | + | chr7_3:82483772-82483791 | Msa1130340:CDS | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | - | chr7_3:82483854-82483873 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | + | chr7_3:82483912-82483931 | Msa1130340:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | + | chr7_3:82483921-82483940 | Msa1130340:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | - | chr7_3:82484240-82484259 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | - | chr7_3:82484338-82484357 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | + | chr7_3:82484427-82484446 | Msa1130340:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | + | chr7_3:82484574-82484593 | Msa1130340:CDS | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | + | chr7_3:82484588-82484607 | Msa1130340:CDS | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | - | chr7_3:82484618-82484637 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | - | chr7_3:82484619-82484638 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | - | chr7_3:82484646-82484665 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | + | chr7_3:82484806-82484825 | Msa1130340:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | + | chr7_3:82485025-82485044 | Msa1130340:CDS | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | + | chr7_3:82485060-82485079 | Msa1130340:CDS | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | + | chr7_3:82485139-82485158 | Msa1130340:CDS | 30.0% |
| GCAATCATTAAACTGAATTC+TGG | - | chr7_3:82485232-82485251 | None:intergenic | 30.0% | |
| ! | ATATGACGCTAAGATGATTT+TGG | + | chr7_3:82485486-82485505 | Msa1130340:CDS | 30.0% |
| !! | ATCAACAAGCTTTTAGCTAA+AGG | + | chr7_3:82483529-82483548 | Msa1130340:CDS | 30.0% |
| TTTGCAAAGCCTTTATTAGT+GGG | - | chr7_3:82483661-82483680 | None:intergenic | 30.0% | |
| ATTTGCAAAGCCTTTATTAG+TGG | - | chr7_3:82483662-82483681 | None:intergenic | 30.0% | |
| ! | TTACAACTCAATTGACTTTG+AGG | + | chr7_3:82483772-82483791 | Msa1130340:CDS | 30.0% |
| TATAATTTAACCTGAGATGC+GGG | - | chr7_3:82483854-82483873 | None:intergenic | 30.0% | |
| TAACTCAGTATTTACGAAAC+TGG | + | chr7_3:82483912-82483931 | Msa1130340:intron | 30.0% | |
| ! | ATTTACGAAACTGGCTTATA+AGG | + | chr7_3:82483921-82483940 | Msa1130340:intron | 30.0% |
| GCTCTTTATTGGAATTGTAT+TGG | - | chr7_3:82484240-82484259 | None:intergenic | 30.0% | |
| TGGTTAAAATTTGAATCGGT+CGG | - | chr7_3:82484338-82484357 | None:intergenic | 30.0% | |
| ATAATATGCATAGCAGTTCA+AGG | + | chr7_3:82484427-82484446 | Msa1130340:intron | 30.0% | |
| !! | GACTGGTTTCAATGATATAA+TGG | + | chr7_3:82484574-82484593 | Msa1130340:CDS | 30.0% |
| !! | ATATAATGGATGAAACTTGC+TGG | + | chr7_3:82484588-82484607 | Msa1130340:CDS | 30.0% |
| ATATGCTAAAGAATCGTTGA+GGG | - | chr7_3:82484618-82484637 | None:intergenic | 30.0% | |
| AATATGCTAAAGAATCGTTG+AGG | - | chr7_3:82484619-82484638 | None:intergenic | 30.0% | |
| TTACCTTAAGATAAGCATCA+TGG | - | chr7_3:82484646-82484665 | None:intergenic | 30.0% | |
| ! | TCTTATCTCTTTTCAATTGG+TGG | + | chr7_3:82484806-82484825 | Msa1130340:intron | 30.0% |
| CATATCACAGAAAATGCAAA+TGG | + | chr7_3:82485025-82485044 | Msa1130340:CDS | 30.0% | |
| GGAGTTTGTACAAAAATTCT+TGG | + | chr7_3:82485060-82485079 | Msa1130340:CDS | 30.0% | |
| !! | GAAAGTACTTCATCAATCAA+TGG | + | chr7_3:82485139-82485158 | Msa1130340:CDS | 30.0% |
| GCAATCATTAAACTGAATTC+TGG | - | chr7_3:82485232-82485251 | None:intergenic | 30.0% | |
| ! | ATATGACGCTAAGATGATTT+TGG | + | chr7_3:82485486-82485505 | Msa1130340:CDS | 30.0% |
| CAACTAGATATCCAAACACA+TGG | - | chr7_3:82483878-82483897 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | - | chr7_3:82484013-82484032 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | - | chr7_3:82484079-82484098 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | + | chr7_3:82484077-82484096 | Msa1130340:intron | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | - | chr7_3:82484157-82484176 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | + | chr7_3:82484167-82484186 | Msa1130340:intron | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | - | chr7_3:82484171-82484190 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | + | chr7_3:82484170-82484189 | Msa1130340:intron | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | + | chr7_3:82484171-82484190 | Msa1130340:intron | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | - | chr7_3:82484223-82484242 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | - | chr7_3:82484251-82484270 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | - | chr7_3:82484264-82484283 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | + | chr7_3:82484487-82484506 | Msa1130340:CDS | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | + | chr7_3:82484552-82484571 | Msa1130340:CDS | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | - | chr7_3:82484617-82484636 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | + | chr7_3:82484640-82484659 | Msa1130340:CDS | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | + | chr7_3:82484874-82484893 | Msa1130340:CDS | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | + | chr7_3:82484894-82484913 | Msa1130340:CDS | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | - | chr7_3:82485094-82485113 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | + | chr7_3:82485117-82485136 | Msa1130340:CDS | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | + | chr7_3:82485143-82485162 | Msa1130340:CDS | 35.0% | |
| CATGTATGAGAAGAAGGAAT+AGG | - | chr7_3:82485275-82485294 | None:intergenic | 35.0% | |
| AATGTGCATGTATGAGAAGA+AGG | - | chr7_3:82485281-82485300 | None:intergenic | 35.0% | |
| !! | CATACATGCACATTTTTCAG+TGG | + | chr7_3:82485287-82485306 | Msa1130340:CDS | 35.0% |
| !! | ATGCACATTTTTCAGTGGAT+TGG | + | chr7_3:82485292-82485311 | Msa1130340:CDS | 35.0% |
| CACATTACAGATATGCAGAT+AGG | + | chr7_3:82485404-82485423 | Msa1130340:intron | 35.0% | |
| TCAACAAAGCTATGTGACAA+AGG | + | chr7_3:82485451-82485470 | Msa1130340:CDS | 35.0% | |
| TGTCAAATGTGCTAGAAGAA+TGG | + | chr7_3:82485516-82485535 | Msa1130340:CDS | 35.0% | |
| GTCAAATGTGCTAGAAGAAT+GGG | + | chr7_3:82485517-82485536 | Msa1130340:CDS | 35.0% | |
| CAACTAGATATCCAAACACA+TGG | - | chr7_3:82483878-82483897 | None:intergenic | 35.0% | |
| TAGGGCTATCAAAAATCCAT+TGG | - | chr7_3:82484013-82484032 | None:intergenic | 35.0% | |
| ! | CTCACAAAATCAGCTTTGTA+AGG | - | chr7_3:82484079-82484098 | None:intergenic | 35.0% |
| !! | CTTACAAAGCTGATTTTGTG+AGG | + | chr7_3:82484077-82484096 | Msa1130340:intron | 35.0% |
| AACAAGTGGTTCAACTTCAA+CGG | - | chr7_3:82484157-82484176 | None:intergenic | 35.0% | |
| !! | ACCACTTGTTATCAAACAAG+AGG | + | chr7_3:82484167-82484186 | Msa1130340:intron | 35.0% |
| ! | TCCTCTTGTTTGATAACAAG+TGG | - | chr7_3:82484171-82484190 | None:intergenic | 35.0% |
| !! | ACTTGTTATCAAACAAGAGG+AGG | + | chr7_3:82484170-82484189 | Msa1130340:intron | 35.0% |
| ! | CTTGTTATCAAACAAGAGGA+GGG | + | chr7_3:82484171-82484190 | Msa1130340:intron | 35.0% |
| TATTGGAGTCTCATATTGCT+CGG | - | chr7_3:82484223-82484242 | None:intergenic | 35.0% | |
| TTAAACGTGGAGCTCTTTAT+TGG | - | chr7_3:82484251-82484270 | None:intergenic | 35.0% | |
| AGACCTTACATCATTAAACG+TGG | - | chr7_3:82484264-82484283 | None:intergenic | 35.0% | |
| TGCTATGTATTGTAAGAGAG+CGG | + | chr7_3:82484487-82484506 | Msa1130340:CDS | 35.0% | |
| CTTCTCCAATGAAAGATGAT+GGG | + | chr7_3:82484552-82484571 | Msa1130340:CDS | 35.0% | |
| TATGCTAAAGAATCGTTGAG+GGG | - | chr7_3:82484617-82484636 | None:intergenic | 35.0% | |
| GTACCATGATGCTTATCTTA+AGG | + | chr7_3:82484640-82484659 | Msa1130340:CDS | 35.0% | |
| TTATTCAAAGACAGTGACAG+AGG | + | chr7_3:82484874-82484893 | Msa1130340:CDS | 35.0% | |
| AGGAATATATGTTGAGCTGT+GGG | + | chr7_3:82484894-82484913 | Msa1130340:CDS | 35.0% | |
| ACATCATCAACATGTACAAG+AGG | - | chr7_3:82485094-82485113 | None:intergenic | 35.0% | |
| TGAAGCTCATATATTCTGCA+TGG | + | chr7_3:82485117-82485136 | Msa1130340:CDS | 35.0% | |
| GTACTTCATCAATCAATGGA+CGG | + | chr7_3:82485143-82485162 | Msa1130340:CDS | 35.0% | |
| CATGTATGAGAAGAAGGAAT+AGG | - | chr7_3:82485275-82485294 | None:intergenic | 35.0% | |
| AATGTGCATGTATGAGAAGA+AGG | - | chr7_3:82485281-82485300 | None:intergenic | 35.0% | |
| !! | CATACATGCACATTTTTCAG+TGG | + | chr7_3:82485287-82485306 | Msa1130340:CDS | 35.0% |
| !! | ATGCACATTTTTCAGTGGAT+TGG | + | chr7_3:82485292-82485311 | Msa1130340:CDS | 35.0% |
| CACATTACAGATATGCAGAT+AGG | + | chr7_3:82485404-82485423 | Msa1130340:intron | 35.0% | |
| TCAACAAAGCTATGTGACAA+AGG | + | chr7_3:82485451-82485470 | Msa1130340:CDS | 35.0% | |
| TGTCAAATGTGCTAGAAGAA+TGG | + | chr7_3:82485516-82485535 | Msa1130340:CDS | 35.0% | |
| GTCAAATGTGCTAGAAGAAT+GGG | + | chr7_3:82485517-82485536 | Msa1130340:CDS | 35.0% | |
| GCAAATCACACACTTTACAG+AGG | + | chr7_3:82483676-82483695 | Msa1130340:intron | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | + | chr7_3:82483688-82483707 | Msa1130340:intron | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | + | chr7_3:82483730-82483749 | Msa1130340:CDS | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | - | chr7_3:82483734-82483753 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | + | chr7_3:82483784-82483803 | Msa1130340:CDS | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | + | chr7_3:82483785-82483804 | Msa1130340:CDS | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | + | chr7_3:82483986-82484005 | Msa1130340:intron | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | + | chr7_3:82483994-82484013 | Msa1130340:intron | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | - | chr7_3:82483998-82484017 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | - | chr7_3:82484222-82484241 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | + | chr7_3:82484258-82484277 | Msa1130340:intron | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | + | chr7_3:82484488-82484507 | Msa1130340:CDS | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | - | chr7_3:82484537-82484556 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | + | chr7_3:82484551-82484570 | Msa1130340:CDS | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | + | chr7_3:82484893-82484912 | Msa1130340:CDS | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | + | chr7_3:82484908-82484927 | Msa1130340:CDS | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | + | chr7_3:82484911-82484930 | Msa1130340:CDS | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | + | chr7_3:82484915-82484934 | Msa1130340:CDS | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | - | chr7_3:82485001-82485020 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | - | chr7_3:82485002-82485021 | None:intergenic | 40.0% | |
| ATATGCAGATAGGCCAAAGA+AGG | + | chr7_3:82485414-82485433 | Msa1130340:intron | 40.0% | |
| GCCAAAGAAGGATATGAAGT+GGG | + | chr7_3:82485426-82485445 | Msa1130340:CDS | 40.0% | |
| CCAAAGAAGGATATGAAGTG+GGG | + | chr7_3:82485427-82485446 | Msa1130340:CDS | 40.0% | |
| CAAAGAAGGATATGAAGTGG+GGG | + | chr7_3:82485428-82485447 | Msa1130340:CDS | 40.0% | |
| TAGAAGAATGGGTGATCTCT+AGG | + | chr7_3:82485528-82485547 | Msa1130340:CDS | 40.0% | |
| AGAAGAATGGGTGATCTCTA+GGG | + | chr7_3:82485529-82485548 | Msa1130340:CDS | 40.0% | |
| GCAAATCACACACTTTACAG+AGG | + | chr7_3:82483676-82483695 | Msa1130340:intron | 40.0% | |
| CTTTACAGAGGATGAGTCTA+AGG | + | chr7_3:82483688-82483707 | Msa1130340:intron | 40.0% | |
| TCCACAATCACAAGACAAAC+TGG | + | chr7_3:82483730-82483749 | Msa1130340:CDS | 40.0% | |
| ACCAGTTTGTCTTGTGATTG+TGG | - | chr7_3:82483734-82483753 | None:intergenic | 40.0% | |
| !! | TGACTTTGAGGCTGCAATTA+AGG | + | chr7_3:82483784-82483803 | Msa1130340:CDS | 40.0% |
| !! | GACTTTGAGGCTGCAATTAA+GGG | + | chr7_3:82483785-82483804 | Msa1130340:CDS | 40.0% |
| AGACTGTGTCCAATAGAAAG+TGG | + | chr7_3:82483986-82484005 | Msa1130340:intron | 40.0% | |
| TCCAATAGAAAGTGGTCCAA+TGG | + | chr7_3:82483994-82484013 | Msa1130340:intron | 40.0% | |
| TCCATTGGACCACTTTCTAT+TGG | - | chr7_3:82483998-82484017 | None:intergenic | 40.0% | |
| ATTGGAGTCTCATATTGCTC+GGG | - | chr7_3:82484222-82484241 | None:intergenic | 40.0% | |
| GCTCCACGTTTAATGATGTA+AGG | + | chr7_3:82484258-82484277 | Msa1130340:intron | 40.0% | |
| GCTATGTATTGTAAGAGAGC+GGG | + | chr7_3:82484488-82484507 | Msa1130340:CDS | 40.0% | |
| AGAAGCAGATACAACAGATC+CGG | - | chr7_3:82484537-82484556 | None:intergenic | 40.0% | |
| GCTTCTCCAATGAAAGATGA+TGG | + | chr7_3:82484551-82484570 | Msa1130340:CDS | 40.0% | |
| GAGGAATATATGTTGAGCTG+TGG | + | chr7_3:82484893-82484912 | Msa1130340:CDS | 40.0% | |
| AGCTGTGGGAACAATGAAAA+TGG | + | chr7_3:82484908-82484927 | Msa1130340:CDS | 40.0% | |
| TGTGGGAACAATGAAAATGG+TGG | + | chr7_3:82484911-82484930 | Msa1130340:CDS | 40.0% | |
| ! | GGAACAATGAAAATGGTGGA+GGG | + | chr7_3:82484915-82484934 | Msa1130340:CDS | 40.0% |
| ATACAAATTGCAACGCTACC+GGG | - | chr7_3:82485001-82485020 | None:intergenic | 40.0% | |
| GATACAAATTGCAACGCTAC+CGG | - | chr7_3:82485002-82485021 | None:intergenic | 40.0% | |
| ATATGCAGATAGGCCAAAGA+AGG | + | chr7_3:82485414-82485433 | Msa1130340:intron | 40.0% | |
| GCCAAAGAAGGATATGAAGT+GGG | + | chr7_3:82485426-82485445 | Msa1130340:CDS | 40.0% | |
| CCAAAGAAGGATATGAAGTG+GGG | + | chr7_3:82485427-82485446 | Msa1130340:CDS | 40.0% | |
| CAAAGAAGGATATGAAGTGG+GGG | + | chr7_3:82485428-82485447 | Msa1130340:CDS | 40.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | + | chr7_3:82483465-82483484 | Msa1130340:exon | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | + | chr7_3:82483478-82483497 | Msa1130340:CDS | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | - | chr7_3:82483564-82483583 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | + | chr7_3:82483649-82483668 | Msa1130340:intron | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | - | chr7_3:82483655-82483674 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | - | chr7_3:82483658-82483677 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | + | chr7_3:82483691-82483710 | Msa1130340:intron | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | - | chr7_3:82484150-82484169 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | - | chr7_3:82484215-82484234 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | + | chr7_3:82484452-82484471 | Msa1130340:CDS | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | + | chr7_3:82484453-82484472 | Msa1130340:CDS | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | + | chr7_3:82484493-82484512 | Msa1130340:CDS | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | + | chr7_3:82484515-82484534 | Msa1130340:CDS | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | - | chr7_3:82484560-82484579 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | + | chr7_3:82484557-82484576 | Msa1130340:CDS | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | + | chr7_3:82484914-82484933 | Msa1130340:CDS | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | + | chr7_3:82484919-82484938 | Msa1130340:CDS | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | + | chr7_3:82484942-82484961 | Msa1130340:CDS | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | + | chr7_3:82484980-82484999 | Msa1130340:CDS | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | + | chr7_3:82485039-82485058 | Msa1130340:CDS | 45.0% | |
| GGCCAAAGAAGGATATGAAG+TGG | + | chr7_3:82485425-82485444 | Msa1130340:CDS | 45.0% | |
| CCCCACTTCATATCCTTCTT+TGG | - | chr7_3:82485430-82485449 | None:intergenic | 45.0% | |
| GAAGAATGGGTGATCTCTAG+GGG | + | chr7_3:82485530-82485549 | Msa1130340:CDS | 45.0% | |
| !! | GGTGATGGAAGCAATGTGTA+AGG | + | chr7_3:82483465-82483484 | Msa1130340:exon | 45.0% |
| ATGTGTAAGGTATGCGTCAC+AGG | + | chr7_3:82483478-82483497 | Msa1130340:CDS | 45.0% | |
| ! | TCAAGTCTCTGAGAGTTGCA+TGG | - | chr7_3:82483564-82483583 | None:intergenic | 45.0% |
| CTTCCACCACCCACTAATAA+AGG | + | chr7_3:82483649-82483668 | Msa1130340:intron | 45.0% | |
| ! | AAGCCTTTATTAGTGGGTGG+TGG | - | chr7_3:82483655-82483674 | None:intergenic | 45.0% |
| GCAAAGCCTTTATTAGTGGG+TGG | - | chr7_3:82483658-82483677 | None:intergenic | 45.0% | |
| TACAGAGGATGAGTCTAAGG+TGG | + | chr7_3:82483691-82483710 | Msa1130340:intron | 45.0% | |
| GGTTCAACTTCAACGGATCT+TGG | - | chr7_3:82484150-82484169 | None:intergenic | 45.0% | |
| ! | TCTCATATTGCTCGGGTTGT+TGG | - | chr7_3:82484215-82484234 | None:intergenic | 45.0% |
| !! | ATTACTGAAGCATCGCTTGC+TGG | + | chr7_3:82484452-82484471 | Msa1130340:CDS | 45.0% |
| !! | TTACTGAAGCATCGCTTGCT+GGG | + | chr7_3:82484453-82484472 | Msa1130340:CDS | 45.0% |
| GTATTGTAAGAGAGCGGGAA+CGG | + | chr7_3:82484493-82484512 | Msa1130340:CDS | 45.0% | |
| ! | GTGAAGCGTCTCATTTACAC+CGG | + | chr7_3:82484515-82484534 | Msa1130340:CDS | 45.0% |
| CCAGTCCCATCATCTTTCAT+TGG | - | chr7_3:82484560-82484579 | None:intergenic | 45.0% | |
| !! | CCAATGAAAGATGATGGGAC+TGG | + | chr7_3:82484557-82484576 | Msa1130340:CDS | 45.0% |
| GGGAACAATGAAAATGGTGG+AGG | + | chr7_3:82484914-82484933 | Msa1130340:CDS | 45.0% | |
| ! | CAATGAAAATGGTGGAGGGT+TGG | + | chr7_3:82484919-82484938 | Msa1130340:CDS | 45.0% |
| AGGTGGTAAGTCTCCTATGT+GGG | + | chr7_3:82484942-82484961 | Msa1130340:CDS | 45.0% | |
| ACTCTTCAATCCTTCACACC+CGG | + | chr7_3:82484980-82484999 | Msa1130340:CDS | 45.0% | |
| TGCAAATGGACGCAAATCAC+TGG | + | chr7_3:82485039-82485058 | Msa1130340:CDS | 45.0% | |
| GGCCAAAGAAGGATATGAAG+TGG | + | chr7_3:82485425-82485444 | Msa1130340:CDS | 45.0% | |
| CCCCACTTCATATCCTTCTT+TGG | - | chr7_3:82485430-82485449 | None:intergenic | 45.0% | |
| GATGCGGGTTCATGGATCAA+GGG | - | chr7_3:82483839-82483858 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | - | chr7_3:82483840-82483859 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | - | chr7_3:82483847-82483866 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | + | chr7_3:82484922-82484941 | Msa1130340:CDS | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | + | chr7_3:82484941-82484960 | Msa1130340:CDS | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | + | chr7_3:82484943-82484962 | Msa1130340:CDS | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | + | chr7_3:82484950-82484969 | Msa1130340:CDS | 50.0% | |
| GATGCGGGTTCATGGATCAA+GGG | - | chr7_3:82483839-82483858 | None:intergenic | 50.0% | |
| AGATGCGGGTTCATGGATCA+AGG | - | chr7_3:82483840-82483859 | None:intergenic | 50.0% | |
| TAACCTGAGATGCGGGTTCA+TGG | - | chr7_3:82483847-82483866 | None:intergenic | 50.0% | |
| ! | TGAAAATGGTGGAGGGTTGG+AGG | + | chr7_3:82484922-82484941 | Msa1130340:CDS | 50.0% |
| GAGGTGGTAAGTCTCCTATG+TGG | + | chr7_3:82484941-82484960 | Msa1130340:CDS | 50.0% | |
| GGTGGTAAGTCTCCTATGTG+GGG | + | chr7_3:82484943-82484962 | Msa1130340:CDS | 50.0% | |
| AGTCTCCTATGTGGGGTTGT+AGG | + | chr7_3:82484950-82484969 | Msa1130340:CDS | 50.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | + | chr7_3:82483487-82483506 | Msa1130340:CDS | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | - | chr7_3:82483834-82483853 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | + | chr7_3:82483841-82483860 | Msa1130340:CDS | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | + | chr7_3:82484925-82484944 | Msa1130340:CDS | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | + | chr7_3:82484953-82484972 | Msa1130340:CDS | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | - | chr7_3:82484958-82484977 | None:intergenic | 55.0% | |
| GTATGCGTCACAGGTGCTTC+TGG | + | chr7_3:82483487-82483506 | Msa1130340:CDS | 55.0% | |
| GGGTTCATGGATCAAGGGTG+TGG | - | chr7_3:82483834-82483853 | None:intergenic | 55.0% | |
| GATCCATGAACCCGCATCTC+AGG | + | chr7_3:82483841-82483860 | Msa1130340:CDS | 55.0% | |
| ! | AAATGGTGGAGGGTTGGAGG+TGG | + | chr7_3:82484925-82484944 | Msa1130340:CDS | 55.0% |
| CTCCTATGTGGGGTTGTAGG+AGG | + | chr7_3:82484953-82484972 | Msa1130340:CDS | 55.0% | |
| CACCTCCTACAACCCCACAT+AGG | - | chr7_3:82484958-82484977 | None:intergenic | 55.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | - | chr7_3:82484993-82485012 | None:intergenic | 60.0% | |
| TGCAACGCTACCGGGTGTGA+AGG | - | chr7_3:82484993-82485012 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82483460 | 82485549 | 82483460 | ID=Msa1130340;Name=Msa1130340 |
| chr7_3 | mRNA | 82483460 | 82485549 | 82483460 | ID=Msa1130340-mRNA-1;Parent=Msa1130340;Name=Msa1130340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=9|0.75|0.4|1|1|1|5|0|358 |
| chr7_3 | exon | 82483460 | 82483583 | 82483460 | ID=Msa1130340-mRNA-1:exon:24285;Parent=Msa1130340-mRNA-1 |
| chr7_3 | exon | 82483696 | 82483862 | 82483696 | ID=Msa1130340-mRNA-1:exon:24286;Parent=Msa1130340-mRNA-1 |
| chr7_3 | exon | 82484443 | 82484661 | 82484443 | ID=Msa1130340-mRNA-1:exon:24287;Parent=Msa1130340-mRNA-1 |
| chr7_3 | exon | 82484866 | 82485313 | 82484866 | ID=Msa1130340-mRNA-1:exon:24288;Parent=Msa1130340-mRNA-1 |
| chr7_3 | exon | 82485422 | 82485549 | 82485422 | ID=Msa1130340-mRNA-1:exon:24289;Parent=Msa1130340-mRNA-1 |
| chr7_3 | five_prime_UTR | 82483460 | 82483468 | 82483460 | ID=Msa1130340-mRNA-1:five_prime_utr;Parent=Msa1130340-mRNA-1 |
| chr7_3 | CDS | 82483469 | 82483583 | 82483469 | ID=Msa1130340-mRNA-1:cds;Parent=Msa1130340-mRNA-1 |
| chr7_3 | CDS | 82483696 | 82483862 | 82483696 | ID=Msa1130340-mRNA-1:cds;Parent=Msa1130340-mRNA-1 |
| chr7_3 | CDS | 82484443 | 82484661 | 82484443 | ID=Msa1130340-mRNA-1:cds;Parent=Msa1130340-mRNA-1 |
| chr7_3 | CDS | 82484866 | 82485313 | 82484866 | ID=Msa1130340-mRNA-1:cds;Parent=Msa1130340-mRNA-1 |
| chr7_3 | CDS | 82485422 | 82485549 | 82485422 | ID=Msa1130340-mRNA-1:cds;Parent=Msa1130340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
