Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043550 | XP_013465876.1 | 99.242 | 264 | 1 | 1 | 1 | 264 | 1 | 263 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043550 | sp|Q5XEM9|ALFL5_ARATH | 71.591 | 264 | 71 | 2 | 1 | 264 | 1 | 260 | 5.97e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043550 | A0A072VES1 | 99.242 | 264 | 1 | 1 | 1 | 264 | 1 | 263 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1043550 | TF | Alfin-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028800 | Msa1043550 | 0.809984 | 1.444150e-50 | -8.615850e-47 |
| Msa0099470 | Msa1043550 | 0.890104 | 1.332306e-73 | -8.615850e-47 |
| Msa0099590 | Msa1043550 | 0.985676 | 2.588408e-164 | -8.615850e-47 |
| Msa0791630 | Msa1043550 | 0.813556 | 2.411714e-51 | -8.615850e-47 |
| Msa0148200 | Msa1043550 | 0.970050 | 4.954481e-131 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043550 | MtrunA17_Chr1g0150821 | 99.242 | 264 | 1 | 1 | 1 | 264 | 1 | 263 | 0.0 | 543 |
| Msa1043550 | MtrunA17_Chr8g0343441 | 78.378 | 259 | 45 | 3 | 8 | 264 | 7 | 256 | 1.90e-130 | 369 |
| Msa1043550 | MtrunA17_Chr2g0300241 | 74.809 | 262 | 49 | 3 | 5 | 264 | 7 | 253 | 3.98e-125 | 356 |
| Msa1043550 | MtrunA17_Chr4g0076771 | 70.588 | 255 | 64 | 3 | 10 | 263 | 10 | 254 | 2.95e-113 | 326 |
| Msa1043550 | MtrunA17_Chr2g0329821 | 72.441 | 254 | 60 | 3 | 11 | 263 | 6 | 250 | 5.75e-111 | 320 |
| Msa1043550 | MtrunA17_Chr4g0006381 | 62.500 | 256 | 77 | 4 | 9 | 264 | 6 | 242 | 4.22e-94 | 277 |
| Msa1043550 | MtrunA17_Chr7g0242511 | 62.500 | 256 | 77 | 6 | 9 | 264 | 6 | 242 | 1.67e-92 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1043550 | AT5G20510.1 | 71.591 | 264 | 71 | 2 | 1 | 264 | 1 | 260 | 6.07e-124 | 353 |
| Msa1043550 | AT3G42790.1 | 72.348 | 264 | 57 | 3 | 1 | 263 | 1 | 249 | 1.08e-122 | 350 |
| Msa1043550 | AT2G02470.1 | 70.196 | 255 | 69 | 3 | 10 | 264 | 9 | 256 | 9.23e-111 | 320 |
| Msa1043550 | AT2G02470.2 | 67.578 | 256 | 65 | 3 | 10 | 264 | 9 | 247 | 2.32e-109 | 316 |
| Msa1043550 | AT5G26210.1 | 78.077 | 260 | 49 | 1 | 4 | 263 | 3 | 254 | 2.14e-108 | 314 |
| Msa1043550 | AT1G14510.1 | 67.063 | 252 | 71 | 2 | 10 | 261 | 9 | 248 | 6.38e-107 | 310 |
| Msa1043550 | AT5G20510.2 | 71.364 | 220 | 59 | 2 | 45 | 264 | 4 | 219 | 4.27e-98 | 286 |
| Msa1043550 | AT5G05610.2 | 61.961 | 255 | 76 | 5 | 9 | 263 | 7 | 240 | 1.38e-97 | 286 |
| Msa1043550 | AT5G05610.1 | 61.961 | 255 | 76 | 5 | 9 | 263 | 7 | 240 | 1.38e-97 | 286 |
| Msa1043550 | AT3G11200.1 | 61.977 | 263 | 82 | 3 | 1 | 263 | 1 | 245 | 1.32e-96 | 283 |
| Msa1043550 | AT5G20510.3 | 77.914 | 163 | 36 | 0 | 6 | 168 | 6 | 168 | 1.47e-82 | 246 |
| Msa1043550 | AT3G11200.2 | 62.100 | 219 | 65 | 3 | 45 | 263 | 32 | 232 | 3.31e-80 | 241 |
| Msa1043550 | AT2G02470.3 | 79.333 | 150 | 30 | 1 | 10 | 159 | 9 | 157 | 3.11e-72 | 222 |
Find 89 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAATCTTTGCCTTTA+TGG | 0.094878 | 7_2:+1751761 | Msa1043550:CDS |
| CTATCGAATTGTTCCGAATT+AGG | 0.167829 | 7_2:+1753930 | Msa1043550:three_prime_UTR |
| TAAGGTATGTTATATTAATT+AGG | 0.274725 | 7_2:+1753896 | Msa1043550:three_prime_UTR |
| AGAAAAGGATTGGCTATCTT+TGG | 0.280443 | 7_2:+1751886 | Msa1043550:CDS |
| GCTATGCAGCTGACGAGTTC+TGG | 0.291054 | 7_2:+1753646 | Msa1043550:CDS |
| ACAATCTTTGAAGTTGTTAC+AGG | 0.306235 | 7_2:+1752906 | Msa1043550:CDS |
| CTTAGAGTTTGATTTGGATT+TGG | 0.307586 | 7_2:-1752982 | None:intergenic |
| ACTAATTTGTTTAGTTGATC+AGG | 0.353424 | 7_2:+1753848 | Msa1043550:three_prime_UTR |
| TTTGAAGTTGTTACAGGGTC+TGG | 0.380524 | 7_2:+1752912 | Msa1043550:CDS |
| TTGATATGCTCAGCCCTTGC+CGG | 0.382099 | 7_2:-1753723 | None:intergenic |
| GCTTACCTTAGAGTTTGATT+TGG | 0.384520 | 7_2:-1752988 | None:intergenic |
| CTGACATAAATATCCTAATT+CGG | 0.385685 | 7_2:-1753943 | None:intergenic |
| GTAACAACTTCAAAGATTGT+TGG | 0.390377 | 7_2:-1752903 | None:intergenic |
| CTCCTATATCCATTGCTTCA+AGG | 0.401682 | 7_2:-1753786 | None:intergenic |
| CAAATCCAAATCAAACTCTA+AGG | 0.411797 | 7_2:+1752983 | Msa1043550:CDS |
| AAGATAAGAGAGTGAGATTG+TGG | 0.422672 | 7_2:-1749567 | None:intergenic |
| TTAATACCCAATGCTGGCTC+TGG | 0.427895 | 7_2:-1751842 | None:intergenic |
| TTGGATTTGACAAGGCTGAT+AGG | 0.428891 | 7_2:+1751966 | Msa1043550:CDS |
| TTATAGTATGTAACTGTACT+TGG | 0.436876 | 7_2:+1754008 | Msa1043550:three_prime_UTR |
| GCTCGCTCGGAAATCCATAA+AGG | 0.438097 | 7_2:-1751775 | None:intergenic |
| GGTATTAACTTTGCTAGAGA+TGG | 0.438852 | 7_2:+1751857 | Msa1043550:CDS |
| GTTACATACTATAAAACTTA+AGG | 0.440343 | 7_2:-1753999 | None:intergenic |
| TCAGGCGGCACTTCCTCAGC+TGG | 0.444344 | 7_2:-1751815 | None:intergenic |
| AATGCTGGCTCTGGAAGCTC+AGG | 0.453734 | 7_2:-1751833 | None:intergenic |
| ATCTGCATTGCCATTGCCAT+TGG | 0.459684 | 7_2:-1753525 | None:intergenic |
| GCCCTTGAAGCAATGGATAT+AGG | 0.461748 | 7_2:+1753784 | Msa1043550:exon |
| GCTCTCTTGTTGCTGCAAGC+TGG | 0.467608 | 7_2:-1753759 | None:intergenic |
| TCCTATATCCATTGCTTCAA+GGG | 0.467689 | 7_2:-1753785 | None:intergenic |
| TTCACCTCCCACTGCTCGCT+CGG | 0.467752 | 7_2:-1751788 | None:intergenic |
| CAACTCTAGGACTCGGGTGG+TGG | 0.482465 | 7_2:-1754061 | None:intergenic |
| ATATAGGAGTTTGTGTAGAT+TGG | 0.482847 | 7_2:+1753800 | Msa1043550:three_prime_UTR |
| CTTGTTGTATGCACAACTCT+AGG | 0.488102 | 7_2:-1754074 | None:intergenic |
| TAAGAGAGTGAGATTGTGGA+GGG | 0.488743 | 7_2:-1749563 | None:intergenic |
| TCGACAGTACGAGGGTTGTA+CGG | 0.497527 | 7_2:-1749645 | None:intergenic |
| GCTGCGACATATGTGAGAAA+TGG | 0.501712 | 7_2:+1753673 | Msa1043550:CDS |
| AATTCGGAACAATTCGATAG+TGG | 0.501907 | 7_2:-1753927 | None:intergenic |
| TGATGCTTGGTTGCTTTCTG+TGG | 0.503077 | 7_2:+1751922 | Msa1043550:CDS |
| TTCTACCAGCAGTGTGATCC+CGG | 0.504757 | 7_2:+1749838 | Msa1043550:CDS |
| ACAACAACCATGGACGTTGT+AGG | 0.512436 | 7_2:+1749618 | Msa1043550:exon |
| ATGGAATGCAAGAAAAGGAT+TGG | 0.512817 | 7_2:+1751876 | Msa1043550:CDS |
| AAGTTGTTACAGGGTCTGGC+AGG | 0.518216 | 7_2:+1752916 | Msa1043550:CDS |
| AGAAGACCGACCGGTGGTGA+GGG | 0.523124 | 7_2:-1749715 | None:intergenic |
| TAGAGATGGAATGCAAGAAA+AGG | 0.524287 | 7_2:+1751871 | Msa1043550:CDS |
| GAGCTTCCAGAGCCAGCATT+GGG | 0.524583 | 7_2:+1751836 | Msa1043550:CDS |
| TTAATTAAAGCCCTCACCAC+CGG | 0.530739 | 7_2:+1749705 | Msa1043550:CDS |
| AAGACTTCTTCGACAGTACG+AGG | 0.536014 | 7_2:-1749654 | None:intergenic |
| TTGCAGTACACAGTGATGCT+TGG | 0.538841 | 7_2:+1751909 | Msa1043550:CDS |
| GAAGTCTTTCGAGATTTCAA+AGG | 0.539441 | 7_2:+1749669 | Msa1043550:CDS |
| ACAGGGTCTGGCAGGAAACA+AGG | 0.548267 | 7_2:+1752924 | Msa1043550:CDS |
| AGGTGTGGACGAGGAAGATG+AGG | 0.549480 | 7_2:+1753584 | Msa1043550:CDS |
| AGAGCTCGCCCTTGAAGCAA+TGG | 0.549499 | 7_2:+1753777 | Msa1043550:exon |
| TGCTAGGTTTGGATTTGACA+AGG | 0.554851 | 7_2:+1751958 | Msa1043550:CDS |
| CAATCTTTGAAGTTGTTACA+GGG | 0.559430 | 7_2:+1752907 | Msa1043550:CDS |
| CGGAGCACCTACAACGTCCA+TGG | 0.562602 | 7_2:-1749625 | None:intergenic |
| GCAAAGTTAATACCCAATGC+TGG | 0.563035 | 7_2:-1751848 | None:intergenic |
| GCAGTCAAAGGATGAGGTTG+AGG | 0.565823 | 7_2:+1753548 | Msa1043550:CDS |
| ATATGTGAGAAATGGTTTCA+CGG | 0.569510 | 7_2:+1753681 | Msa1043550:CDS |
| GCAGATGCAGTCAAAGGATG+AGG | 0.569670 | 7_2:+1753542 | Msa1043550:CDS |
| ATAAGAGAGTGAGATTGTGG+AGG | 0.569849 | 7_2:-1749564 | None:intergenic |
| TGAGCTTCCAGAGCCAGCAT+TGG | 0.570153 | 7_2:+1751835 | Msa1043550:CDS |
| TATGCACAACTCTAGGACTC+GGG | 0.572720 | 7_2:-1754067 | None:intergenic |
| GTATGCACAACTCTAGGACT+CGG | 0.573947 | 7_2:-1754068 | None:intergenic |
| CGTGAAGATTACTCCGGCAA+GGG | 0.576974 | 7_2:+1753710 | Msa1043550:CDS |
| TGGATTTCCGAGCGAGCAGT+GGG | 0.579516 | 7_2:+1751781 | Msa1043550:CDS |
| GGCAATGCAGATGCAGTCAA+AGG | 0.579948 | 7_2:+1753536 | Msa1043550:CDS |
| CTTTCTCAACAACAAAGAGA+AGG | 0.580893 | 7_2:+1749522 | Msa1043550:five_prime_UTR |
| GCTGGCTCTGGAAGCTCAGG+CGG | 0.581111 | 7_2:-1751830 | None:intergenic |
| GCGTGAAGATTACTCCGGCA+AGG | 0.589663 | 7_2:+1753709 | Msa1043550:CDS |
| GAGAAGACCGACCGGTGGTG+AGG | 0.592144 | 7_2:-1749716 | None:intergenic |
| TGAAGTGAAACTGAAAGAAA+CGG | 0.600500 | 7_2:-1749593 | None:intergenic |
| ATGGATTTCCGAGCGAGCAG+TGG | 0.601477 | 7_2:+1751780 | Msa1043550:CDS |
| TATTACCGGGATCACACTGC+TGG | 0.607631 | 7_2:-1749843 | None:intergenic |
| GAGACTTTGTGTGGGGCATG+TGG | 0.613065 | 7_2:+1753618 | Msa1043550:CDS |
| AACACGGAGAGACTTTGTGT+GGG | 0.622939 | 7_2:+1753610 | Msa1043550:CDS |
| GGATGAAGATGGTGTAGGTG+TGG | 0.626967 | 7_2:+1753569 | Msa1043550:CDS |
| AGATGGTGTAGGTGTGGACG+AGG | 0.628142 | 7_2:+1753575 | Msa1043550:CDS |
| TTTCTCAACAACAAAGAGAA+GGG | 0.630443 | 7_2:+1749523 | Msa1043550:five_prime_UTR |
| GAACACGGAGAGACTTTGTG+TGG | 0.630911 | 7_2:+1753609 | Msa1043550:CDS |
| GGAGGTGAATCTGCCAGCTG+AGG | 0.634327 | 7_2:+1751802 | Msa1043550:CDS |
| AGACTTCTTCGACAGTACGA+GGG | 0.643030 | 7_2:-1749653 | None:intergenic |
| GATGAGGTTGAGGATGAAGA+TGG | 0.646194 | 7_2:+1753558 | Msa1043550:CDS |
| TCACTTCACAACAACAACCA+TGG | 0.647922 | 7_2:+1749608 | Msa1043550:exon |
| GAGGAAGATGAGGAAGAACA+CGG | 0.666720 | 7_2:+1753594 | Msa1043550:CDS |
| ATTTCCGAGCGAGCAGTGGG+AGG | 0.670558 | 7_2:+1751784 | Msa1043550:CDS |
| GTTGAGGATGAAGATGGTGT+AGG | 0.671969 | 7_2:+1753564 | Msa1043550:CDS |
| GTCTGGCAGGAAACAAGGAA+AGG | 0.676618 | 7_2:+1752929 | Msa1043550:CDS |
| GCACAACTCTAGGACTCGGG+TGG | 0.694311 | 7_2:-1754064 | None:intergenic |
| ACACGGAGAGACTTTGTGTG+GGG | 0.707279 | 7_2:+1753611 | Msa1043550:CDS |
| AAAATGCGTGAAGATTACTC+CGG | 0.732353 | 7_2:+1753704 | Msa1043550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAAAATTATTTTATCATA+AGG | - | chr7_2:1751049-1751068 | None:intergenic | 10.0% |
| !!! | TTTTCAATTAGTTTTAATTT+TGG | + | chr7_2:1751468-1751487 | Msa1043550:intron | 10.0% |
| !!! | ATTTATAATTTGTTGTATGA+TGG | + | chr7_2:1750954-1750973 | Msa1043550:intron | 15.0% |
| !!! | AAATTATTTTATCATAAGGT+GGG | - | chr7_2:1751045-1751064 | None:intergenic | 15.0% |
| !!! | AAAATTATTTTATCATAAGG+TGG | - | chr7_2:1751046-1751065 | None:intergenic | 15.0% |
| !! | AAAATTGAAATGTTCATTTA+CGG | + | chr7_2:1751258-1751277 | Msa1043550:intron | 15.0% |
| !!! | CAGTTAATTTTAATTTTTTC+AGG | + | chr7_2:1751512-1751531 | Msa1043550:intron | 15.0% |
| !!! | TTGATTGTATTTTGTATTTT+TGG | + | chr7_2:1751706-1751725 | Msa1043550:intron | 15.0% |
| !!! | GACTTTTTTTATTTGAATTT+TGG | + | chr7_2:1752051-1752070 | Msa1043550:intron | 15.0% |
| !!! | TTTTTTATTTGAATTTTGGT+TGG | + | chr7_2:1752055-1752074 | Msa1043550:intron | 15.0% |
| !!! | AAATTATGTGATGTTTTATT+TGG | + | chr7_2:1752196-1752215 | Msa1043550:intron | 15.0% |
| !!! | AATTATGTGATGTTTTATTT+GGG | + | chr7_2:1752197-1752216 | Msa1043550:intron | 15.0% |
| !! | TAAGGTATGTTATATTAATT+AGG | + | chr7_2:1753896-1753915 | Msa1043550:three_prime_UTR | 15.0% |
| !! | TTTACGAAATAGAATATTAC+CGG | - | chr7_2:1749860-1749879 | None:intergenic | 20.0% |
| !! | GTAAAAGAATCTATAATAGT+TGG | + | chr7_2:1750443-1750462 | Msa1043550:intron | 20.0% |
| !! | ATTTGCATATGAATTACATT+TGG | + | chr7_2:1750501-1750520 | Msa1043550:intron | 20.0% |
| !!! | AATTATTTTATCATAAGGTG+GGG | - | chr7_2:1751044-1751063 | None:intergenic | 20.0% |
| !! | TTTAAACTTGAAGAATCTAA+TGG | - | chr7_2:1751149-1751168 | None:intergenic | 20.0% |
| !! | TTTAGTTAATCCTAATAGAA+AGG | + | chr7_2:1751209-1751228 | Msa1043550:intron | 20.0% |
| !!! | TGAAATTGAGTTACTTATTT+TGG | + | chr7_2:1751322-1751341 | Msa1043550:intron | 20.0% |
| !!! | TGTATGAAGATTTTAACTTA+GGG | + | chr7_2:1751372-1751391 | Msa1043550:intron | 20.0% |
| !! | AAGATAATCACTCTTATAAA+TGG | - | chr7_2:1752226-1752245 | None:intergenic | 20.0% |
| !! | ACAGTGATAAAAAAAATCAA+AGG | + | chr7_2:1752434-1752453 | Msa1043550:intron | 20.0% |
| !!! | TTAGTCTTGCTTTTAATTTA+AGG | + | chr7_2:1753878-1753897 | Msa1043550:three_prime_UTR | 20.0% |
| !! | GTTACATACTATAAAACTTA+AGG | - | chr7_2:1754002-1754021 | None:intergenic | 20.0% |
| ! | ATCTGGAAAGAAAAAAAACA+CGG | - | chr7_2:1749809-1749828 | None:intergenic | 25.0% |
| ! | TTACGAAATAGAATATTACC+GGG | - | chr7_2:1749859-1749878 | None:intergenic | 25.0% |
| ! | ATTAATCACATGCAAAATTG+TGG | - | chr7_2:1750144-1750163 | None:intergenic | 25.0% |
| !! | AATTTTGCATGTGATTAATC+AGG | + | chr7_2:1750145-1750164 | Msa1043550:intron | 25.0% |
| ! | TGTAACTATAAGGGAAAATT+GGG | + | chr7_2:1750177-1750196 | Msa1043550:intron | 25.0% |
| ! | GTGTCTATTATTTACATACA+TGG | + | chr7_2:1750199-1750218 | Msa1043550:intron | 25.0% |
| ! | AATCAAAATGCTACCATTTA+TGG | + | chr7_2:1750299-1750318 | Msa1043550:intron | 25.0% |
| ! | ATCAAAATGCTACCATTTAT+GGG | + | chr7_2:1750300-1750319 | Msa1043550:intron | 25.0% |
| !!! | AAAATTTCTACTGTTTCTGT+TGG | + | chr7_2:1750340-1750359 | Msa1043550:intron | 25.0% |
| !! | TATCAACCAATCAAACATTT+TGG | - | chr7_2:1750398-1750417 | None:intergenic | 25.0% |
| ! | GTACTATATTACACTTCATA+GGG | - | chr7_2:1750601-1750620 | None:intergenic | 25.0% |
| !!! | AGCAAAACTTTATTTTGTTC+AGG | + | chr7_2:1750798-1750817 | Msa1043550:intron | 25.0% |
| !!! | TGAAATTTTTGAGCAAATCA+AGG | - | chr7_2:1750920-1750939 | None:intergenic | 25.0% |
| ! | CTAGATAATTCCTTTCTATT+AGG | - | chr7_2:1751222-1751241 | None:intergenic | 25.0% |
| ! | CTAATAGAAAGGAATTATCT+AGG | + | chr7_2:1751220-1751239 | Msa1043550:intron | 25.0% |
| !!! | AATTGAGTTACTTATTTTGG+CGG | + | chr7_2:1751325-1751344 | Msa1043550:intron | 25.0% |
| !!! | CTGTATGAAGATTTTAACTT+AGG | + | chr7_2:1751371-1751390 | Msa1043550:intron | 25.0% |
| ! | AATCCAGTATCAATATTCAA+GGG | - | chr7_2:1751407-1751426 | None:intergenic | 25.0% |
| ! | AAATCCAGTATCAATATTCA+AGG | - | chr7_2:1751408-1751427 | None:intergenic | 25.0% |
| ! | TTATATTCATCATTCAAGAG+GGG | - | chr7_2:1751576-1751595 | None:intergenic | 25.0% |
| ! | CTTATATTCATCATTCAAGA+GGG | - | chr7_2:1751577-1751596 | None:intergenic | 25.0% |
| !!! | AATATAAAAGTTCTGAAGGT+TGG | - | chr7_2:1751636-1751655 | None:intergenic | 25.0% |
| !! | GAGAAATATAAAAGTTCTGA+AGG | - | chr7_2:1751640-1751659 | None:intergenic | 25.0% |
| ! | AAAAATCAAAGGAAAACTAG+TGG | + | chr7_2:1752445-1752464 | Msa1043550:intron | 25.0% |
| ! | CTAAAAGGAAAGAAACAATA+AGG | - | chr7_2:1752668-1752687 | None:intergenic | 25.0% |
| !! | AAGATACTCGTTTTACTAAA+AGG | - | chr7_2:1752683-1752702 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGCCATTCATTGA+TGG | + | chr7_2:1752777-1752796 | Msa1043550:intron | 25.0% |
| ! | GTCATTTAATCTTGATTGAA+AGG | - | chr7_2:1753127-1753146 | None:intergenic | 25.0% |
| ! | GTATGGTATTTAATCAGTTA+AGG | + | chr7_2:1753440-1753459 | Msa1043550:intron | 25.0% |
| !!! | ACTAATTTGTTTAGTTGATC+AGG | + | chr7_2:1753848-1753867 | Msa1043550:three_prime_UTR | 25.0% |
| ! | CTGACATAAATATCCTAATT+CGG | - | chr7_2:1753946-1753965 | None:intergenic | 25.0% |
| ! | TTATAGTATGTAACTGTACT+TGG | + | chr7_2:1754008-1754027 | Msa1043550:three_prime_UTR | 25.0% |
| TTTCTCAACAACAAAGAGAA+GGG | + | chr7_2:1749523-1749542 | Msa1043550:five_prime_UTR | 30.0% | |
| TGAAGTGAAACTGAAAGAAA+CGG | - | chr7_2:1749596-1749615 | None:intergenic | 30.0% | |
| AGAAAAAACAGTTACAGAAG+TGG | + | chr7_2:1749954-1749973 | Msa1043550:intron | 30.0% | |
| TCAAACACGTGATAAAAACA+AGG | - | chr7_2:1750042-1750061 | None:intergenic | 30.0% | |
| TCAATTCTAAGTCAAAGTTG+TGG | + | chr7_2:1750070-1750089 | Msa1043550:intron | 30.0% | |
| TGTTGCATGTGTAACTATAA+GGG | + | chr7_2:1750168-1750187 | Msa1043550:intron | 30.0% | |
| GTGTAACTATAAGGGAAAAT+TGG | + | chr7_2:1750176-1750195 | Msa1043550:intron | 30.0% | |
| GCTTGTACTATTGTTCATTT+AGG | + | chr7_2:1750232-1750251 | Msa1043550:intron | 30.0% | |
| TGCATATGAATTACATTTGG+TGG | + | chr7_2:1750504-1750523 | Msa1043550:intron | 30.0% | |
| GCATATGAATTACATTTGGT+GGG | + | chr7_2:1750505-1750524 | Msa1043550:intron | 30.0% | |
| CGTACTATATTACACTTCAT+AGG | - | chr7_2:1750602-1750621 | None:intergenic | 30.0% | |
| ATGAAGTGTAATATAGTACG+CGG | + | chr7_2:1750602-1750621 | Msa1043550:intron | 30.0% | |
| TAACCTTAATACATCGTACA+TGG | - | chr7_2:1750667-1750686 | None:intergenic | 30.0% | |
| AACATAAGCAACAACAAGTA+CGG | - | chr7_2:1751016-1751035 | None:intergenic | 30.0% | |
| !!! | ATTGAGTTACTTATTTTGGC+GGG | + | chr7_2:1751326-1751345 | Msa1043550:intron | 30.0% |
| !! | TAGTAGCTTGTCTGTTATTT+TGG | + | chr7_2:1751544-1751563 | Msa1043550:intron | 30.0% |
| GCTTATATTCATCATTCAAG+AGG | - | chr7_2:1751578-1751597 | None:intergenic | 30.0% | |
| GGTTTCCAAGAAAATAGATA+AGG | - | chr7_2:1751615-1751634 | None:intergenic | 30.0% | |
| ACAATCAACAATTTCAACTG+TGG | - | chr7_2:1751694-1751713 | None:intergenic | 30.0% | |
| AAGGAAAATCTTTGCCTTTA+TGG | + | chr7_2:1751761-1751780 | Msa1043550:CDS | 30.0% | |
| !! | CTTTCTGTGGCTTTTTATTT+CGG | + | chr7_2:1751935-1751954 | Msa1043550:CDS | 30.0% |
| ACTAAAATGCAAAGGATGAA+AGG | - | chr7_2:1752161-1752180 | None:intergenic | 30.0% | |
| ! | GATTATCGACTAAAATGCAA+AGG | - | chr7_2:1752169-1752188 | None:intergenic | 30.0% |
| TAGTGAAAAACTAACAGTAC+TGG | - | chr7_2:1752249-1752268 | None:intergenic | 30.0% | |
| !! | GCATTACTTTTGTCAAATAG+CGG | + | chr7_2:1752288-1752307 | Msa1043550:intron | 30.0% |
| GCTAAAGAGTTATAGCATAA+TGG | + | chr7_2:1752312-1752331 | Msa1043550:intron | 30.0% | |
| !! | TATCTGCTATTTCACACATT+GGG | + | chr7_2:1752369-1752388 | Msa1043550:intron | 30.0% |
| CTTACTTGAGTGTATGATAT+TGG | + | chr7_2:1752603-1752622 | Msa1043550:intron | 30.0% | |
| GTAACAACTTCAAAGATTGT+TGG | - | chr7_2:1752906-1752925 | None:intergenic | 30.0% | |
| !! | ACAATCTTTGAAGTTGTTAC+AGG | + | chr7_2:1752906-1752925 | Msa1043550:CDS | 30.0% |
| !! | CAATCTTTGAAGTTGTTACA+GGG | + | chr7_2:1752907-1752926 | Msa1043550:CDS | 30.0% |
| !! | CTTAGAGTTTGATTTGGATT+TGG | - | chr7_2:1752985-1753004 | None:intergenic | 30.0% |
| CAAATCCAAATCAAACTCTA+AGG | + | chr7_2:1752983-1753002 | Msa1043550:CDS | 30.0% | |
| TAAACATATATCCCTCTCTA+TGG | + | chr7_2:1753371-1753390 | Msa1043550:intron | 30.0% | |
| GATTAAATACCATACCAATC+AGG | - | chr7_2:1753435-1753454 | None:intergenic | 30.0% | |
| ATATGTGAGAAATGGTTTCA+CGG | + | chr7_2:1753681-1753700 | Msa1043550:CDS | 30.0% | |
| ATATAGGAGTTTGTGTAGAT+TGG | + | chr7_2:1753800-1753819 | Msa1043550:three_prime_UTR | 30.0% | |
| CTTTCTCAACAACAAAGAGA+AGG | + | chr7_2:1749522-1749541 | Msa1043550:five_prime_UTR | 35.0% | |
| AAGATAAGAGAGTGAGATTG+TGG | - | chr7_2:1749570-1749589 | None:intergenic | 35.0% | |
| GAAGTCTTTCGAGATTTCAA+AGG | + | chr7_2:1749669-1749688 | Msa1043550:CDS | 35.0% | |
| AAAAAAAAGAGAAGACCGAC+CGG | - | chr7_2:1749727-1749746 | None:intergenic | 35.0% | |
| GTGTTGCATGTGTAACTATA+AGG | + | chr7_2:1750167-1750186 | Msa1043550:intron | 35.0% | |
| ATTGAGATGCTTCCCATAAA+TGG | - | chr7_2:1750315-1750334 | None:intergenic | 35.0% | |
| !! | TTTATGGGAAGCATCTCAAT+TGG | + | chr7_2:1750315-1750334 | Msa1043550:intron | 35.0% |
| GTGAGTCCAAAATGTTTGAT+TGG | + | chr7_2:1750389-1750408 | Msa1043550:intron | 35.0% | |
| TTAATGCCCAAAATACGTTG+CGG | + | chr7_2:1750633-1750652 | Msa1043550:intron | 35.0% | |
| CATCCATGTACGATGTATTA+AGG | + | chr7_2:1750661-1750680 | Msa1043550:intron | 35.0% | |
| TTACATCCCAAAAAGAGAAG+AGG | + | chr7_2:1750741-1750760 | Msa1043550:intron | 35.0% | |
| TACATCCCAAAAAGAGAAGA+GGG | + | chr7_2:1750742-1750761 | Msa1043550:intron | 35.0% | |
| ! | AATAGCCCTCTTCTCTTTTT+GGG | - | chr7_2:1750750-1750769 | None:intergenic | 35.0% |
| ! | AAATAGCCCTCTTCTCTTTT+TGG | - | chr7_2:1750751-1750770 | None:intergenic | 35.0% |
| AAAAGAGAAGAGGGCTATTT+AGG | + | chr7_2:1750751-1750770 | Msa1043550:intron | 35.0% | |
| TGTTCAGGAAGTTCATTTCT+TGG | + | chr7_2:1750813-1750832 | Msa1043550:intron | 35.0% | |
| GATCTGAATCTGATGTAGTA+TGG | + | chr7_2:1750865-1750884 | Msa1043550:intron | 35.0% | |
| GGTTGAACCTAAATATGATG+CGG | - | chr7_2:1750994-1751013 | None:intergenic | 35.0% | |
| ACATAAGCAACAACAAGTAC+GGG | - | chr7_2:1751015-1751034 | None:intergenic | 35.0% | |
| ! | TATTTTATCATAAGGTGGGG+TGG | - | chr7_2:1751041-1751060 | None:intergenic | 35.0% |
| AGATAGGCTTCAATAGATAG+TGG | + | chr7_2:1751288-1751307 | Msa1043550:intron | 35.0% | |
| !! | TCAATAGATAGTGGATGTGA+TGG | + | chr7_2:1751297-1751316 | Msa1043550:intron | 35.0% |
| TCACCCTTGAATATTGATAC+TGG | + | chr7_2:1751401-1751420 | Msa1043550:intron | 35.0% | |
| TTGATACTGGATTTAGTCTG+AGG | + | chr7_2:1751414-1751433 | Msa1043550:intron | 35.0% | |
| !! | GTCTGAGGTATCTATTTTCT+TGG | + | chr7_2:1751429-1751448 | Msa1043550:intron | 35.0% |
| ! | TGCTGCCTTATCTATTTTCT+TGG | + | chr7_2:1751607-1751626 | Msa1043550:intron | 35.0% |
| CTGTGGAACTTAAGCATATT+AGG | - | chr7_2:1751677-1751696 | None:intergenic | 35.0% | |
| GGTATTAACTTTGCTAGAGA+TGG | + | chr7_2:1751857-1751876 | Msa1043550:CDS | 35.0% | |
| TAGAGATGGAATGCAAGAAA+AGG | + | chr7_2:1751871-1751890 | Msa1043550:CDS | 35.0% | |
| ATGGAATGCAAGAAAAGGAT+TGG | + | chr7_2:1751876-1751895 | Msa1043550:CDS | 35.0% | |
| !! | AGAAAAGGATTGGCTATCTT+TGG | + | chr7_2:1751886-1751905 | Msa1043550:CDS | 35.0% |
| !!! | TTTTATTTCGGTGCTAGGTT+TGG | + | chr7_2:1751947-1751966 | Msa1043550:CDS | 35.0% |
| !! | CTATCTGCTATTTCACACAT+TGG | + | chr7_2:1752368-1752387 | Msa1043550:intron | 35.0% |
| !! | ATCTGCTATTTCACACATTG+GGG | + | chr7_2:1752370-1752389 | Msa1043550:intron | 35.0% |
| ! | TTTCACACATTGGGGATTTT+CGG | + | chr7_2:1752378-1752397 | Msa1043550:intron | 35.0% |
| GAAAGCAAACCATCAATGAA+TGG | - | chr7_2:1752789-1752808 | None:intergenic | 35.0% | |
| TGTACTTATCATCTCTTTGC+AGG | + | chr7_2:1752850-1752869 | Msa1043550:intron | 35.0% | |
| GCTTACCTTAGAGTTTGATT+TGG | - | chr7_2:1752991-1753010 | None:intergenic | 35.0% | |
| CTCTTAGTATCAGTGAATAG+TGG | - | chr7_2:1753034-1753053 | None:intergenic | 35.0% | |
| CACTATTCACTGATACTAAG+AGG | + | chr7_2:1753032-1753051 | Msa1043550:intron | 35.0% | |
| TGATACTAAGAGGACTTTGA+GGG | + | chr7_2:1753042-1753061 | Msa1043550:intron | 35.0% | |
| TTGCTCCAAAAACAAGGATT+CGG | - | chr7_2:1753304-1753323 | None:intergenic | 35.0% | |
| ACTTTCTTGCTCCAAAAACA+AGG | - | chr7_2:1753310-1753329 | None:intergenic | 35.0% | |
| ! | GTTAAGGCTGTTATCTCTTT+TGG | + | chr7_2:1753456-1753475 | Msa1043550:intron | 35.0% |
| ! | GCCAAAGTTTTCAAAACCAA+TGG | + | chr7_2:1753509-1753528 | Msa1043550:CDS | 35.0% |
| !!! | GCCATTGGTTTTGAAAACTT+TGG | - | chr7_2:1753513-1753532 | None:intergenic | 35.0% |
| ! | GTTTTCAAAACCAATGGCAA+TGG | + | chr7_2:1753515-1753534 | Msa1043550:CDS | 35.0% |
| AAAATGCGTGAAGATTACTC+CGG | + | chr7_2:1753704-1753723 | Msa1043550:CDS | 35.0% | |
| TCCTATATCCATTGCTTCAA+GGG | - | chr7_2:1753788-1753807 | None:intergenic | 35.0% | |
| AATTCGGAACAATTCGATAG+TGG | - | chr7_2:1753930-1753949 | None:intergenic | 35.0% | |
| CTATCGAATTGTTCCGAATT+AGG | + | chr7_2:1753930-1753949 | Msa1043550:three_prime_UTR | 35.0% | |
| TAAGAGAGTGAGATTGTGGA+GGG | - | chr7_2:1749566-1749585 | None:intergenic | 40.0% | |
| ATAAGAGAGTGAGATTGTGG+AGG | - | chr7_2:1749567-1749586 | None:intergenic | 40.0% | |
| TCACTTCACAACAACAACCA+TGG | + | chr7_2:1749608-1749627 | Msa1043550:exon | 40.0% | |
| TTAATTAAAGCCCTCACCAC+CGG | + | chr7_2:1749705-1749724 | Msa1043550:CDS | 40.0% | |
| TGGTAGAATACATCGACATC+TGG | - | chr7_2:1749826-1749845 | None:intergenic | 40.0% | |
| TCTGATGTAGTATGGACTTC+TGG | + | chr7_2:1750873-1750892 | Msa1043550:intron | 40.0% | |
| CTGATGTAGTATGGACTTCT+GGG | + | chr7_2:1750874-1750893 | Msa1043550:intron | 40.0% | |
| !! | TTGTTGTATGATGGACCCAA+AGG | + | chr7_2:1750963-1750982 | Msa1043550:intron | 40.0% |
| TATGATGCGGCATAACCTTT+GGG | - | chr7_2:1750981-1751000 | None:intergenic | 40.0% | |
| ATATGATGCGGCATAACCTT+TGG | - | chr7_2:1750982-1751001 | None:intergenic | 40.0% | |
| GGTTATGCCGCATCATATTT+AGG | + | chr7_2:1750984-1751003 | Msa1043550:intron | 40.0% | |
| ! | CTGGAAGTATGCAAGCATAT+CGG | - | chr7_2:1751174-1751193 | None:intergenic | 40.0% |
| CATTTACGGCTTCAGAAGAT+AGG | + | chr7_2:1751272-1751291 | Msa1043550:intron | 40.0% | |
| !!! | AATTTTGGCTACGATGCTTC+AGG | + | chr7_2:1751483-1751502 | Msa1043550:intron | 40.0% |
| TAACAGACAAGCTACTATCG+TGG | - | chr7_2:1751541-1751560 | None:intergenic | 40.0% | |
| GAAAATAGATAAGGCAGCAC+AGG | - | chr7_2:1751606-1751625 | None:intergenic | 40.0% | |
| ! | AAGCATATTAGGTGCTGCAT+TGG | - | chr7_2:1751666-1751685 | None:intergenic | 40.0% |
| ! | CAAGCTTTGTGATACAGAGA+AGG | + | chr7_2:1751742-1751761 | Msa1043550:intron | 40.0% |
| GCAAAGTTAATACCCAATGC+TGG | - | chr7_2:1751851-1751870 | None:intergenic | 40.0% | |
| !!! | TGGCTTTTTATTTCGGTGCT+AGG | + | chr7_2:1751942-1751961 | Msa1043550:CDS | 40.0% |
| TGCTAGGTTTGGATTTGACA+AGG | + | chr7_2:1751958-1751977 | Msa1043550:CDS | 40.0% | |
| TTGGATTTGACAAGGCTGAT+AGG | + | chr7_2:1751966-1751985 | Msa1043550:CDS | 40.0% | |
| TTTACCCTTTCACAAAGCTG+CGG | + | chr7_2:1752001-1752020 | Msa1043550:intron | 40.0% | |
| !!! | GATAGTGTTGCTGTTTTCAG+AGG | - | chr7_2:1752353-1752372 | None:intergenic | 40.0% |
| TCAAAGGAAAACTAGTGGAG+AGG | + | chr7_2:1752450-1752469 | Msa1043550:intron | 40.0% | |
| !! | CAACAAACTTTTGAGAGGCA+GGG | - | chr7_2:1752740-1752759 | None:intergenic | 40.0% |
| ! | ACTGCCAACAAACTTTTGAG+AGG | - | chr7_2:1752745-1752764 | None:intergenic | 40.0% |
| !! | GATGGTTTGCTTTCTCAAGA+TGG | + | chr7_2:1752795-1752814 | Msa1043550:intron | 40.0% |
| ! | TTTGAAGTTGTTACAGGGTC+TGG | + | chr7_2:1752912-1752931 | Msa1043550:CDS | 40.0% |
| CTGATACTAAGAGGACTTTG+AGG | + | chr7_2:1753041-1753060 | Msa1043550:intron | 40.0% | |
| ! | TAAGAGGACTTTGAGGGATT+TGG | + | chr7_2:1753048-1753067 | Msa1043550:intron | 40.0% |
| GATTGAAAGGTGATCTCAGA+CGG | - | chr7_2:1753114-1753133 | None:intergenic | 40.0% | |
| AAATGACTCACGCTATGACT+TGG | + | chr7_2:1753140-1753159 | Msa1043550:intron | 40.0% | |
| !!! | GAGATCCGAATCCTTGTTTT+TGG | + | chr7_2:1753296-1753315 | Msa1043550:intron | 40.0% |
| AACTGTGTCTGTTTCCTGAT+TGG | + | chr7_2:1753418-1753437 | Msa1043550:intron | 40.0% | |
| TGTCTGTTTCCTGATTGGTA+TGG | + | chr7_2:1753423-1753442 | Msa1043550:intron | 40.0% | |
| !!! | GGTTTTGAAAACTTTGGCTG+AGG | - | chr7_2:1753507-1753526 | None:intergenic | 40.0% |
| CTCCTATATCCATTGCTTCA+AGG | - | chr7_2:1753789-1753808 | None:intergenic | 40.0% | |
| ! | CTTGTTGTATGCACAACTCT+AGG | - | chr7_2:1754077-1754096 | None:intergenic | 40.0% |
| TGAGAGAGAGAGAGAGAGAA+TGG | - | chr7_2:1749477-1749496 | None:intergenic | 45.0% | |
| ACAACAACCATGGACGTTGT+AGG | + | chr7_2:1749618-1749637 | Msa1043550:exon | 45.0% | |
| AGACTTCTTCGACAGTACGA+GGG | - | chr7_2:1749656-1749675 | None:intergenic | 45.0% | |
| AAGACTTCTTCGACAGTACG+AGG | - | chr7_2:1749657-1749676 | None:intergenic | 45.0% | |
| ! | GCAATGCCGCAACGTATTTT+GGG | - | chr7_2:1750642-1750661 | None:intergenic | 45.0% |
| ! | TGCAATGCCGCAACGTATTT+TGG | - | chr7_2:1750643-1750662 | None:intergenic | 45.0% |
| TAAATCTTATGCAGCAGCGC+TGG | - | chr7_2:1751193-1751212 | None:intergenic | 45.0% | |
| !! | TTAATACCCAATGCTGGCTC+TGG | - | chr7_2:1751845-1751864 | None:intergenic | 45.0% |
| TTGCAGTACACAGTGATGCT+TGG | + | chr7_2:1751909-1751928 | Msa1043550:CDS | 45.0% | |
| ! | TGATGCTTGGTTGCTTTCTG+TGG | + | chr7_2:1751922-1751941 | Msa1043550:CDS | 45.0% |
| ! | GCAGCTTTGTGAAAGGGTAA+AGG | - | chr7_2:1752002-1752021 | None:intergenic | 45.0% |
| ! | AAAGCCGCAGCTTTGTGAAA+GGG | - | chr7_2:1752008-1752027 | None:intergenic | 45.0% |
| ! | TAAAGCCGCAGCTTTGTGAA+AGG | - | chr7_2:1752009-1752028 | None:intergenic | 45.0% |
| !! | CCAACAAACTTTTGAGAGGC+AGG | - | chr7_2:1752741-1752760 | None:intergenic | 45.0% |
| CCTGCCTCTCAAAAGTTTGT+TGG | + | chr7_2:1752738-1752757 | Msa1043550:intron | 45.0% | |
| ! | TAGTCTAGTTTGCATGACCG+TGG | + | chr7_2:1753248-1753267 | Msa1043550:intron | 45.0% |
| AAGGATTCACACATGTGCCA+CGG | - | chr7_2:1753268-1753287 | None:intergenic | 45.0% | |
| ATGTGTGAATCCTTTGCTGC+AGG | + | chr7_2:1753274-1753293 | Msa1043550:intron | 45.0% | |
| ! | ACTTTCTAGCGCCATAGAGA+GGG | - | chr7_2:1753385-1753404 | None:intergenic | 45.0% |
| ATCTGCATTGCCATTGCCAT+TGG | - | chr7_2:1753528-1753547 | None:intergenic | 45.0% | |
| GATGAGGTTGAGGATGAAGA+TGG | + | chr7_2:1753558-1753577 | Msa1043550:CDS | 45.0% | |
| GTTGAGGATGAAGATGGTGT+AGG | + | chr7_2:1753564-1753583 | Msa1043550:CDS | 45.0% | |
| GAGGAAGATGAGGAAGAACA+CGG | + | chr7_2:1753594-1753613 | Msa1043550:CDS | 45.0% | |
| AACACGGAGAGACTTTGTGT+GGG | + | chr7_2:1753610-1753629 | Msa1043550:CDS | 45.0% | |
| GCTGCGACATATGTGAGAAA+TGG | + | chr7_2:1753673-1753692 | Msa1043550:CDS | 45.0% | |
| GCCCTTGAAGCAATGGATAT+AGG | + | chr7_2:1753784-1753803 | Msa1043550:exon | 45.0% | |
| !! | TATGCACAACTCTAGGACTC+GGG | - | chr7_2:1754070-1754089 | None:intergenic | 45.0% |
| !! | GTATGCACAACTCTAGGACT+CGG | - | chr7_2:1754071-1754090 | None:intergenic | 45.0% |
| !!! | AATTTTTTTTACAAAAAAAT+AGG | - | chr7_2:1749770-1749789 | None:intergenic | 5.0% |
| TCGACAGTACGAGGGTTGTA+CGG | - | chr7_2:1749648-1749667 | None:intergenic | 50.0% | |
| AAAAAGAGAAGACCGACCGG+TGG | - | chr7_2:1749724-1749743 | None:intergenic | 50.0% | |
| TTCTACCAGCAGTGTGATCC+CGG | + | chr7_2:1749838-1749857 | Msa1043550:CDS | 50.0% | |
| TATTACCGGGATCACACTGC+TGG | - | chr7_2:1749846-1749865 | None:intergenic | 50.0% | |
| GGTGGGTCATAACAAGAAGC+TGG | + | chr7_2:1750522-1750541 | Msa1043550:intron | 50.0% | |
| TGCTGTTGCTGCGTTTGTCA+TGG | + | chr7_2:1751068-1751087 | Msa1043550:intron | 50.0% | |
| GCTCGCTCGGAAATCCATAA+AGG | - | chr7_2:1751778-1751797 | None:intergenic | 50.0% | |
| GCGGCTTTACTCTGCTCAAT+AGG | + | chr7_2:1752020-1752039 | Msa1043550:intron | 50.0% | |
| ! | ATTGGGGATTTTCGGCGTTC+TGG | + | chr7_2:1752386-1752405 | Msa1043550:intron | 50.0% |
| AAGTTGTTACAGGGTCTGGC+AGG | + | chr7_2:1752916-1752935 | Msa1043550:CDS | 50.0% | |
| GTCTGGCAGGAAACAAGGAA+AGG | + | chr7_2:1752929-1752948 | Msa1043550:CDS | 50.0% | |
| GATTTGGATTCCCTGCAGTC+TGG | + | chr7_2:1753064-1753083 | Msa1043550:intron | 50.0% | |
| CCATGGATATCCAGACTGCA+GGG | - | chr7_2:1753077-1753096 | None:intergenic | 50.0% | |
| ACCATGGATATCCAGACTGC+AGG | - | chr7_2:1753078-1753097 | None:intergenic | 50.0% | |
| ! | AGAAAGTGTGTCGTCTCGTC+TGG | + | chr7_2:1753187-1753206 | Msa1043550:intron | 50.0% |
| ATTCGGATCTCCTGCAGCAA+AGG | - | chr7_2:1753287-1753306 | None:intergenic | 50.0% | |
| ! | GACTTTCTAGCGCCATAGAG+AGG | - | chr7_2:1753386-1753405 | None:intergenic | 50.0% |
| GGCAATGCAGATGCAGTCAA+AGG | + | chr7_2:1753536-1753555 | Msa1043550:CDS | 50.0% | |
| GCAGATGCAGTCAAAGGATG+AGG | + | chr7_2:1753542-1753561 | Msa1043550:CDS | 50.0% | |
| GCAGTCAAAGGATGAGGTTG+AGG | + | chr7_2:1753548-1753567 | Msa1043550:CDS | 50.0% | |
| GGATGAAGATGGTGTAGGTG+TGG | + | chr7_2:1753569-1753588 | Msa1043550:CDS | 50.0% | |
| GAACACGGAGAGACTTTGTG+TGG | + | chr7_2:1753609-1753628 | Msa1043550:CDS | 50.0% | |
| ACACGGAGAGACTTTGTGTG+GGG | + | chr7_2:1753611-1753630 | Msa1043550:CDS | 50.0% | |
| CGTGAAGATTACTCCGGCAA+GGG | + | chr7_2:1753710-1753729 | Msa1043550:CDS | 50.0% | |
| TTGATATGCTCAGCCCTTGC+CGG | - | chr7_2:1753726-1753745 | None:intergenic | 50.0% | |
| TTAAAGCCCTCACCACCGGT+CGG | + | chr7_2:1749709-1749728 | Msa1043550:intron | 55.0% | |
| ATGGATTTCCGAGCGAGCAG+TGG | + | chr7_2:1751780-1751799 | Msa1043550:CDS | 55.0% | |
| TGGATTTCCGAGCGAGCAGT+GGG | + | chr7_2:1751781-1751800 | Msa1043550:CDS | 55.0% | |
| !! | AATGCTGGCTCTGGAAGCTC+AGG | - | chr7_2:1751836-1751855 | None:intergenic | 55.0% |
| TGAGCTTCCAGAGCCAGCAT+TGG | + | chr7_2:1751835-1751854 | Msa1043550:CDS | 55.0% | |
| GAGCTTCCAGAGCCAGCATT+GGG | + | chr7_2:1751836-1751855 | Msa1043550:CDS | 55.0% | |
| GTCGTAGACACGTGTGCAGT+TGG | + | chr7_2:1752481-1752500 | Msa1043550:intron | 55.0% | |
| ACAGGGTCTGGCAGGAAACA+AGG | + | chr7_2:1752924-1752943 | Msa1043550:CDS | 55.0% | |
| CCCTGCAGTCTGGATATCCA+TGG | + | chr7_2:1753074-1753093 | Msa1043550:intron | 55.0% | |
| CGGTGCAGATTGCTTGACCA+TGG | - | chr7_2:1753094-1753113 | None:intergenic | 55.0% | |
| AGATGGTGTAGGTGTGGACG+AGG | + | chr7_2:1753575-1753594 | Msa1043550:CDS | 55.0% | |
| AGGTGTGGACGAGGAAGATG+AGG | + | chr7_2:1753584-1753603 | Msa1043550:CDS | 55.0% | |
| GAGACTTTGTGTGGGGCATG+TGG | + | chr7_2:1753618-1753637 | Msa1043550:CDS | 55.0% | |
| GCTATGCAGCTGACGAGTTC+TGG | + | chr7_2:1753646-1753665 | Msa1043550:CDS | 55.0% | |
| GCGTGAAGATTACTCCGGCA+AGG | + | chr7_2:1753709-1753728 | Msa1043550:CDS | 55.0% | |
| GCTCTCTTGTTGCTGCAAGC+TGG | - | chr7_2:1753762-1753781 | None:intergenic | 55.0% | |
| AGAGCTCGCCCTTGAAGCAA+TGG | + | chr7_2:1753777-1753796 | Msa1043550:exon | 55.0% | |
| ! | CGGAGCACCTACAACGTCCA+TGG | - | chr7_2:1749628-1749647 | None:intergenic | 60.0% |
| AGAAGACCGACCGGTGGTGA+GGG | - | chr7_2:1749718-1749737 | None:intergenic | 60.0% | |
| ATTTCCGAGCGAGCAGTGGG+AGG | + | chr7_2:1751784-1751803 | Msa1043550:CDS | 60.0% | |
| TTCACCTCCCACTGCTCGCT+CGG | - | chr7_2:1751791-1751810 | None:intergenic | 60.0% | |
| GGAGGTGAATCTGCCAGCTG+AGG | + | chr7_2:1751802-1751821 | Msa1043550:CDS | 60.0% | |
| !! | CAACTCTAGGACTCGGGTGG+TGG | - | chr7_2:1754064-1754083 | None:intergenic | 60.0% |
| !! | GCACAACTCTAGGACTCGGG+TGG | - | chr7_2:1754067-1754086 | None:intergenic | 60.0% |
| GAGAAGACCGACCGGTGGTG+AGG | - | chr7_2:1749719-1749738 | None:intergenic | 65.0% | |
| TCAGGCGGCACTTCCTCAGC+TGG | - | chr7_2:1751818-1751837 | None:intergenic | 65.0% | |
| !! | GCTGGCTCTGGAAGCTCAGG+CGG | - | chr7_2:1751833-1751852 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 1749457 | 1754102 | 1749457 | ID=Msa1043550;Name=Msa1043550 |
| chr7_2 | mRNA | 1749457 | 1754102 | 1749457 | ID=Msa1043550-mRNA-1;Parent=Msa1043550;Name=Msa1043550-mRNA-1;_AED=0.06;_eAED=0.06;_QI=170|1|1|1|1|1|5|311|264 |
| chr7_2 | exon | 1749457 | 1749726 | 1749457 | ID=Msa1043550-mRNA-1:exon:333;Parent=Msa1043550-mRNA-1 |
| chr7_2 | exon | 1749827 | 1749859 | 1749827 | ID=Msa1043550-mRNA-1:exon:334;Parent=Msa1043550-mRNA-1 |
| chr7_2 | exon | 1751759 | 1751987 | 1751759 | ID=Msa1043550-mRNA-1:exon:335;Parent=Msa1043550-mRNA-1 |
| chr7_2 | exon | 1752872 | 1753004 | 1752872 | ID=Msa1043550-mRNA-1:exon:336;Parent=Msa1043550-mRNA-1 |
| chr7_2 | exon | 1753492 | 1754102 | 1753492 | ID=Msa1043550-mRNA-1:exon:337;Parent=Msa1043550-mRNA-1 |
| chr7_2 | five_prime_UTR | 1749457 | 1749626 | 1749457 | ID=Msa1043550-mRNA-1:five_prime_utr;Parent=Msa1043550-mRNA-1 |
| chr7_2 | CDS | 1749627 | 1749726 | 1749627 | ID=Msa1043550-mRNA-1:cds;Parent=Msa1043550-mRNA-1 |
| chr7_2 | CDS | 1749827 | 1749859 | 1749827 | ID=Msa1043550-mRNA-1:cds;Parent=Msa1043550-mRNA-1 |
| chr7_2 | CDS | 1751759 | 1751987 | 1751759 | ID=Msa1043550-mRNA-1:cds;Parent=Msa1043550-mRNA-1 |
| chr7_2 | CDS | 1752872 | 1753004 | 1752872 | ID=Msa1043550-mRNA-1:cds;Parent=Msa1043550-mRNA-1 |
| chr7_2 | CDS | 1753492 | 1753791 | 1753492 | ID=Msa1043550-mRNA-1:cds;Parent=Msa1043550-mRNA-1 |
| chr7_2 | three_prime_UTR | 1753792 | 1754102 | 1753792 | ID=Msa1043550-mRNA-1:three_prime_utr;Parent=Msa1043550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
