AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046740 MtrunA17_Chr7g0214661 97.216 970 16 3 1 960 1 969 0.0 1896
Msa1046740 MtrunA17_Chr7g0214591 84.286 140 10 1 29 168 17 144 5.74e-74 239
Msa1046740 MtrunA17_Chr1g0151921 52.074 217 88 3 3 203 5 221 9.89e-70 242
Msa1046740 MtrunA17_Chr1g0151921 46.835 79 37 1 788 866 447 520 9.20e-13 72.0
Msa1046740 MtrunA17_Chr7g0214601 94.030 67 3 1 207 273 1 66 3.49e-32 119
Msa1046740 MtrunA17_Chr7g0214581 78.049 82 10 1 545 626 1 74 1.49e-30 117
Msa1046740 MtrunA17_Chr4g0031511 33.562 146 93 2 12 153 16 161 3.77e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046740 AT3G59290.1 45.422 1103 380 45 1 960 1 1024 0.0 674
Msa1046740 AT2G43160.3 49.026 924 291 35 1 875 1 793 0.0 654
Msa1046740 AT2G43160.2 49.026 924 291 35 1 875 1 793 0.0 654
Msa1046740 AT2G43160.5 49.026 924 291 35 1 875 1 793 0.0 654
Msa1046740 AT2G43160.1 49.026 924 291 35 1 875 1 793 0.0 654
Msa1046740 AT2G43160.4 54.364 653 195 23 1 602 1 601 0.0 548
Msa1046740 AT5G11710.2 51.754 228 95 4 3 215 5 232 6.91e-69 240
Msa1046740 AT5G11710.1 51.754 228 95 4 3 215 5 232 6.91e-69 240
Msa1046740 AT5G11710.3 51.754 228 95 4 3 215 5 232 6.91e-69 240
Msa1046740 AT3G23350.2 33.846 130 83 1 27 153 36 165 4.54e-14 74.3
Msa1046740 AT3G23350.1 33.846 130 83 1 27 153 35 164 4.78e-14 74.3
Msa1046740 AT3G46540.3 37.736 106 65 1 32 136 4 109 1.19e-12 69.7
Msa1046740 AT3G46540.2 37.736 106 65 1 32 136 40 145 1.23e-12 70.1
Msa1046740 AT3G46540.1 37.736 106 65 1 32 136 52 157 1.28e-12 70.5

Find 326 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCCGACATGTCTAATTT+TGG 0.120905 7_2:-7381282 Msa1046740:CDS
CCAGAACCCATCATCGAATT+TGG 0.156309 7_2:+7380022 None:intergenic
TGTAACATCAACTGTAAATA+TGG 0.164903 7_2:-7380107 Msa1046740:CDS
TATGAAAGTTCATACCTTTC+AGG 0.179618 7_2:+7382510 None:intergenic
TCATACCTGATTGAAATTAT+TGG 0.180358 7_2:+7381786 None:intergenic
GCTCCAACCACTTCTAATTT+TGG 0.186011 7_2:-7381946 Msa1046740:CDS
TTCAACAACCAGAGCTTCTT+TGG 0.235438 7_2:-7380517 Msa1046740:CDS
GTTGAACCAGTGTTTGCTTC+AGG 0.238458 7_2:+7381838 None:intergenic
TCTGGTCAACCTGGCATGCC+TGG 0.244292 7_2:-7380868 Msa1046740:CDS
GGTTGAGAAACTAAAGAATT+TGG 0.251924 7_2:+7380406 None:intergenic
TCAGTTGGATTATTGTTTAC+AGG 0.256532 7_2:+7382333 None:intergenic
TTTGGGGTCACCCTTCTTTA+GGG 0.259399 7_2:-7379538 Msa1046740:three_prime_UTR
GAATATCAGTTTCCGAATCT+TGG 0.282146 7_2:+7381172 None:intergenic
TTGAACATTATTCTCATAGA+TGG 0.285330 7_2:-7379751 Msa1046740:three_prime_UTR
AGATAGCAGTTTGGGCCTTT+TGG 0.285455 7_2:-7386105 Msa1046740:five_prime_UTR
TTGACTTCGAATCCATTAAT+AGG 0.289742 7_2:-7380165 Msa1046740:CDS
TTGAAACAAAATCAACAGTT+TGG 0.291455 7_2:-7380369 Msa1046740:CDS
CAATCACAAAATGGATATAA+TGG 0.300667 7_2:-7380700 Msa1046740:CDS
AACAGTTCAGCTCCTACTTT+TGG 0.301573 7_2:-7381099 Msa1046740:CDS
TGACCAGTTGGTTCAGAAAA+TGG 0.305050 7_2:+7381042 None:intergenic
GAAACTTTCTGAGCAAAATT+CGG 0.314709 7_2:-7382583 Msa1046740:CDS
TTCTGGTATGGGCATGGGTA+TGG 0.316001 7_2:-7380005 Msa1046740:CDS
CGGGATAGAATAACCTTACT+TGG 0.322909 7_2:-7379484 Msa1046740:three_prime_UTR
ATATTTACAGTTGATGTTAC+AGG 0.336067 7_2:+7380109 None:intergenic
CGGTTGTGCTGTTGGAGCTT+GGG 0.338820 7_2:+7380612 None:intergenic
ATGTATTCTCAATCACAAAA+TGG 0.341820 7_2:-7380709 Msa1046740:CDS
AGCCTAGCCTCTGCTCCTAC+TGG 0.346159 7_2:-7382363 Msa1046740:CDS
GGCAGAAGGCTGCTGTTAAT+AGG 0.348327 7_2:-7384943 Msa1046740:CDS
TATGGGTATGGGTGGTATGG+GGG 0.348395 7_2:-7379918 Msa1046740:CDS
GATAGAAATGGCTATGGTTA+TGG 0.348738 7_2:-7384437 Msa1046740:CDS
ACTAATCCGTTAGCAGATAT+TGG 0.353426 7_2:-7380190 Msa1046740:CDS
CTGGTTAATTTAAACATATC+TGG 0.356748 7_2:-7380325 Msa1046740:CDS
GGGTATGGGTATGGGTGGTA+TGG 0.366177 7_2:-7379921 Msa1046740:CDS
ATGGGTATGGGTGGTATGGG+GGG 0.366700 7_2:-7379917 Msa1046740:CDS
TTTACCTTGCTTCCAGTGAT+TGG 0.366779 7_2:+7382727 None:intergenic
CTTGTTGTCCAAAGAAGCTC+TGG 0.367203 7_2:+7380509 None:intergenic
AAGGGTTTGTGCAGGTTGAT+TGG 0.371447 7_2:+7380987 None:intergenic
AGAGAAAGGTTGAGTGTCAC+TGG 0.375866 7_2:+7381215 None:intergenic
GTTCCGTTTGGATCTGAATC+AGG 0.378931 7_2:-7386969 Msa1046740:intron
GGGCAATGCTCCCGGTGGTA+TGG 0.384752 7_2:-7379978 Msa1046740:CDS
CCAAGCTCCAACAGCACAAC+CGG 0.387453 7_2:-7380611 Msa1046740:CDS
TGCTCCCGGTGGTATGGGTA+TGG 0.390879 7_2:-7379972 Msa1046740:CDS
CCTTCTCATTCTGGTCAACC+TGG 0.393221 7_2:-7380877 Msa1046740:CDS
AAGAAAGTGCTCAAAGTTCC+TGG 0.395628 7_2:-7385849 Msa1046740:CDS
AAACTTTCTGAGCAAAATTC+GGG 0.395642 7_2:-7382582 Msa1046740:CDS
CCAAATTCGATGATGGGTTC+TGG 0.396774 7_2:-7380022 Msa1046740:CDS
GACATCCATGGGTATGGGTA+TGG 0.397976 7_2:-7379930 Msa1046740:CDS
CATTGGGAGCAGGCACTTGA+TGG 0.399820 7_2:+7380455 None:intergenic
TCTGGTATGGGCATGGGTAT+GGG 0.400275 7_2:-7380004 Msa1046740:CDS
TTCCATTAGGAGGTTGCATC+TGG 0.401445 7_2:+7379873 None:intergenic
GAACCAGGAGGCATTCCATT+AGG 0.401518 7_2:+7379860 None:intergenic
CCGGTTGTGCTGTTGGAGCT+TGG 0.402371 7_2:+7380611 None:intergenic
TTAACGACACTGGCAAGAAT+TGG 0.403604 7_2:-7385450 Msa1046740:CDS
GCAGAAGGCTGCTGTTAATA+GGG 0.404364 7_2:-7384942 Msa1046740:CDS
GGTATGGGTATGGGTGGTAT+GGG 0.405295 7_2:-7379920 Msa1046740:CDS
AAAGCTATGGGATCAGGTTC+AGG 0.405979 7_2:-7380082 Msa1046740:CDS
TTGAACCAGTGTTTGCTTCA+GGG 0.407111 7_2:+7381839 None:intergenic
TTCGATGATGGGTTCTGGTA+TGG 0.407415 7_2:-7380017 Msa1046740:CDS
CCCATCATCGAATTTGGATT+AGG 0.408567 7_2:+7380028 None:intergenic
AGAACATTCTTATCAAATAT+CGG 0.410125 7_2:-7385219 Msa1046740:intron
ACGCACCAATTCGTTCCGTT+TGG 0.415550 7_2:-7386981 Msa1046740:five_prime_UTR
AGTAGGCACTGGTATTGATA+TGG 0.415592 7_2:+7379683 None:intergenic
TGAAACAAAATCAACAGTTT+GGG 0.420070 7_2:-7380368 Msa1046740:CDS
TGTAAATATGGGTAAAGCTA+TGG 0.420888 7_2:-7380095 Msa1046740:CDS
GTATGGGTATGGGTGGTATG+GGG 0.421351 7_2:-7379919 Msa1046740:CDS
CCTCTTGTGCCCGCTACATC+AGG 0.422749 7_2:-7381871 Msa1046740:CDS
TACCAGATGCAACCTCCTAA+TGG 0.425576 7_2:-7379875 Msa1046740:CDS
AATATCAGTTTCCGAATCTT+GGG 0.428028 7_2:+7381173 None:intergenic
TTGCCACAGGGATCCTCAAC+AGG 0.429401 7_2:-7380655 Msa1046740:CDS
CGGCATTAAAACCATCTGAT+TGG 0.430216 7_2:+7381298 None:intergenic
GGAAAAGGTTGCTGTGCATA+TGG 0.430457 7_2:+7380898 None:intergenic
CTGGAGTAAGAGATGTATCC+AGG 0.431098 7_2:+7380743 None:intergenic
CCAATGCTTGAGTGTGAACC+AGG 0.432826 7_2:+7384509 None:intergenic
GGCATAGGTCGTGCTGGTGC+TGG 0.437369 7_2:-7380061 Msa1046740:CDS
ACCTAATCCAAATTCGATGA+TGG 0.437810 7_2:-7380029 Msa1046740:CDS
TAGAAGCTGAAAAGCCTGGC+TGG 0.438107 7_2:+7380947 None:intergenic
AGATGATCATGTCAGTAGTC+TGG 0.438186 7_2:-7385480 Msa1046740:CDS
CTGGTCAACCTGGCATGCCT+GGG 0.438933 7_2:-7380867 Msa1046740:CDS
GACGAAAACCCAGGCATGCC+AGG 0.440096 7_2:+7380859 None:intergenic
TGGGTATGGGTGGTATGGGG+GGG 0.442031 7_2:-7379916 Msa1046740:CDS
ACCTTCTTCATTGTAGCAGC+TGG 0.447293 7_2:+7386063 None:intergenic
AACTGTGATGCTTGATCAGT+TGG 0.447537 7_2:+7380538 None:intergenic
TTTGACAGTACTTGAGTACT+TGG 0.447802 7_2:-7385279 Msa1046740:CDS
CTGGGAGCAGATGCAGAGTA+TGG 0.448787 7_2:+7381234 None:intergenic
AGGCATGACATCCATGGGTA+TGG 0.450485 7_2:-7379936 Msa1046740:CDS
GTTTCCTTGATCTCTTCCAC+TGG 0.451489 7_2:+7385033 None:intergenic
GTTTCAAACTTATCTTTGGA+TGG 0.452212 7_2:+7380385 None:intergenic
CTTGAGTACTTGGTGGCTCA+TGG 0.452669 7_2:-7385269 Msa1046740:CDS
AAGAAAGAATCGTAGAGGTT+AGG 0.456321 7_2:-7384964 Msa1046740:CDS
ATGGGAATGGGCAATGCTCC+CGG 0.457562 7_2:-7379986 Msa1046740:CDS
ATGGGCATGGGTATGGGAAT+GGG 0.459007 7_2:-7379998 Msa1046740:CDS
GTTTGGTGATTCACCATTCA+AGG 0.459359 7_2:-7381382 Msa1046740:CDS
ATGGGTTCTGGTATGGGCAT+GGG 0.460258 7_2:-7380010 Msa1046740:CDS
CACTCAAGCATTGGAAGCTA+TGG 0.466820 7_2:-7384500 Msa1046740:CDS
CCAACAGCCTCTTCATAACT+AGG 0.467604 7_2:+7382552 None:intergenic
GACAGTACTTGAGTACTTGG+TGG 0.468045 7_2:-7385276 Msa1046740:CDS
TGGTCCAGATGAAGTTGAAA+AGG 0.468346 7_2:+7381062 None:intergenic
CAGATCCAAACGGAACGAAT+TGG 0.468424 7_2:+7386976 None:intergenic
TATGGGCATGGGTATGGGAA+TGG 0.468916 7_2:-7379999 Msa1046740:CDS
GCAGCAGCAGTTACTTCAGT+TGG 0.469123 7_2:+7382318 None:intergenic
AAGAAGATCGTTATGCGAGC+AGG 0.469595 7_2:-7384466 Msa1046740:CDS
GGCATTAAAACCATCTGATT+GGG 0.472191 7_2:+7381299 None:intergenic
ATGGGTAAAGCTATGGGATC+AGG 0.472433 7_2:-7380088 Msa1046740:CDS
GGCAATGCTCCCGGTGGTAT+GGG 0.473961 7_2:-7379977 Msa1046740:CDS
GATGGGTTCTGGTATGGGCA+TGG 0.474191 7_2:-7380011 Msa1046740:CDS
CGGTTACAGAGATGATGATA+GGG 0.474593 7_2:-7384321 Msa1046740:CDS
GTAACATCAACTGTAAATAT+GGG 0.478597 7_2:-7380106 Msa1046740:CDS
CAAAAGGTGGCTGCATAGAA+TGG 0.478813 7_2:+7380827 None:intergenic
GGCTGGGAAAATTGACCACT+TGG 0.479333 7_2:+7380964 None:intergenic
ATCACAAACTTTCCCCATCA+TGG 0.481463 7_2:-7380583 Msa1046740:CDS
TCGCCAAAATTAGAAGTGGT+TGG 0.482153 7_2:+7381943 None:intergenic
ATGGGTATATGATGAGCTAA+AGG 0.482711 7_2:+7380474 None:intergenic
GGGAAAATTGACCACTTGGA+AGG 0.482889 7_2:+7380968 None:intergenic
AGACTACTGACATGATCATC+TGG 0.483128 7_2:+7385482 None:intergenic
ACGGTTACAGAGATGATGAT+AGG 0.483970 7_2:-7384322 Msa1046740:CDS
GTAAATATGGGTAAAGCTAT+GGG 0.484647 7_2:-7380094 Msa1046740:CDS
ACATCCATGGGTATGGGTAT+GGG 0.486043 7_2:-7379929 Msa1046740:CDS
AGAGATTATGAGGAACGTTA+TGG 0.487618 7_2:-7384350 Msa1046740:CDS
AGTTCATACCTTTCAGGCAC+AGG 0.488307 7_2:+7382516 None:intergenic
ATTTGTGCCGGTTGTGCTGT+TGG 0.488539 7_2:+7380604 None:intergenic
TCGTTATGGTAGAGATTATG+AGG 0.489581 7_2:-7384360 Msa1046740:CDS
TCTCATCGGTATCCACCATA+TGG 0.490499 7_2:+7379779 None:intergenic
ATTATAGTTACCTGGCATGT+TGG 0.492662 7_2:+7379838 None:intergenic
TTCTGCTGTGATGTCATCTC+AGG 0.493420 7_2:+7381120 None:intergenic
AAAATATGAGGAACATGTAA+AGG 0.494414 7_2:+7379451 None:intergenic
TTTACCTTCTGTTCAATGCC+AGG 0.495324 7_2:+7385831 None:intergenic
CCTCCTAATGGAATGCCTCC+TGG 0.495524 7_2:-7379863 Msa1046740:CDS
TGGGTCCAATAATTTCAATC+AGG 0.496058 7_2:-7381791 Msa1046740:intron
TACGGTGAAGCATTGGGAGC+AGG 0.498349 7_2:+7380445 None:intergenic
TGCTCAAAGCACCCTAAAGA+AGG 0.498537 7_2:+7379527 None:intergenic
GATTCCAGTGGAAGAGATCA+AGG 0.499927 7_2:-7385037 Msa1046740:CDS
GACCCACGTGGTCCTACATC+AGG 0.501026 7_2:-7382228 Msa1046740:intron
TCGATGATGGGTTCTGGTAT+GGG 0.502187 7_2:-7380016 Msa1046740:CDS
TATGGAAGAGAAAGAGAAAT+GGG 0.502207 7_2:-7384419 Msa1046740:CDS
ATGGGTATGGGAGGTTACGG+AGG 0.502622 7_2:-7379959 Msa1046740:CDS
CTCAGAGCCCTGTGCCTGAA+AGG 0.503032 7_2:-7382524 Msa1046740:intron
AGGAAGCAATAACCCAAGTA+AGG 0.503609 7_2:+7379471 None:intergenic
GCATGAGGGGACGAGCCTCT+TGG 0.505127 7_2:+7382399 None:intergenic
GGTATGGGAGGTTACGGAGG+AGG 0.507832 7_2:-7379956 Msa1046740:CDS
ATAGCATACGGTGAAGCATT+GGG 0.508701 7_2:+7380439 None:intergenic
CTTCGAATCCATTAATAGGA+AGG 0.510293 7_2:-7380161 Msa1046740:CDS
CGGAGGAGGCATGACATCCA+TGG 0.510517 7_2:-7379942 Msa1046740:CDS
TGAACCAGTGTTTGCTTCAG+GGG 0.511259 7_2:+7381840 None:intergenic
GCTCCCGGTGGTATGGGTAT+GGG 0.511770 7_2:-7379971 Msa1046740:CDS
CCACTTGGAAGGGTTTGTGC+AGG 0.512945 7_2:+7380979 None:intergenic
TAATAGGAAGGAAAAGAGAA+TGG 0.513835 7_2:-7380149 Msa1046740:CDS
CAGAGCTTCTTTGGACAACA+AGG 0.516128 7_2:-7380508 Msa1046740:CDS
TTATGGAAGAGAAAGAGAAA+TGG 0.516264 7_2:-7384420 Msa1046740:CDS
GGTTATGCTCAACAGCCATA+TGG 0.517930 7_2:-7379794 Msa1046740:CDS
TGCTACTAGCAATGAACCAT+GGG 0.518050 7_2:-7385643 Msa1046740:CDS
AACTGGGAGTTAGCAGAGAA+AGG 0.518088 7_2:+7381201 None:intergenic
GGAAAATTGACCACTTGGAA+GGG 0.518359 7_2:+7380969 None:intergenic
GTCATCTCAGGTAATGGTGC+AGG 0.518666 7_2:+7381132 None:intergenic
TGATGTTACAGGTGTGTTAG+TGG 0.518674 7_2:+7380120 None:intergenic
AATCGCGATGGAGATCGTTA+TGG 0.526840 7_2:-7384374 Msa1046740:CDS
TGTTGATGTGGACTACTAGT+AGG 0.527017 7_2:+7379666 None:intergenic
TAGTAGTCCACATCAACATT+CGG 0.527351 7_2:-7379661 Msa1046740:three_prime_UTR
GATGTTACAGGTGTGTTAGT+GGG 0.528282 7_2:+7380121 None:intergenic
GGCTTTACCGAGACGAGTGT+TGG 0.530398 7_2:+7384216 None:intergenic
ACTAGCAGCAACAGATGTAC+TGG 0.530914 7_2:+7382296 None:intergenic
GAGATCAAGGAAACAATGTC+AGG 0.532236 7_2:-7385024 Msa1046740:CDS
ATGTTATTATTATAGTTACC+TGG 0.532550 7_2:+7379830 None:intergenic
AAGCAGTAGATCCTCCATGA+TGG 0.533157 7_2:+7380569 None:intergenic
CCTGGTTCACACTCAAGCAT+TGG 0.537566 7_2:-7384509 Msa1046740:CDS
ACCTCCCATACCCATACCAC+CGG 0.537775 7_2:+7379967 None:intergenic
CAGCACGAGCCAGCACCAAA+AGG 0.538632 7_2:+7386090 None:intergenic
CAGCGTTGTGTACCAGTGAC+GGG 0.539082 7_2:-7379503 Msa1046740:three_prime_UTR
AATAGCATACGGTGAAGCAT+TGG 0.539962 7_2:+7380438 None:intergenic
GGTCAACTTACTCCTCATCA+AGG 0.540194 7_2:-7381024 Msa1046740:CDS
AGGTTATTCTATCCCGTCAC+TGG 0.540940 7_2:+7379491 None:intergenic
AGCAGTAGATCCTCCATGAT+GGG 0.542007 7_2:+7380570 None:intergenic
AGTTCCTGGCATTGAACAGA+AGG 0.542788 7_2:-7385835 Msa1046740:intron
ACAGAAGTATCAGCCTTGAA+TGG 0.544782 7_2:+7381369 None:intergenic
GGTATGGGTATGGGAGGTTA+CGG 0.544805 7_2:-7379962 Msa1046740:CDS
TGTGATGTCATCTCAGGTAA+TGG 0.544951 7_2:+7381126 None:intergenic
CCTCCTGGTTCCAACATGCC+AGG 0.545416 7_2:-7379848 Msa1046740:CDS
TGGGTATATGATGAGCTAAA+GGG 0.547010 7_2:+7380475 None:intergenic
GTTGAAATTCCTGATGTAGC+GGG 0.547079 7_2:+7381862 None:intergenic
TTGCAGGGATGTTGAAACTT+CGG 0.547701 7_2:-7382433 Msa1046740:intron
CCTAATCCAAATTCGATGAT+GGG 0.547928 7_2:-7380028 Msa1046740:CDS
AGCAGGGAGGAAGATAGAAA+TGG 0.551877 7_2:-7384449 Msa1046740:CDS
AATGAACCATGGGGTCCTCA+TGG 0.552520 7_2:-7385633 Msa1046740:CDS
ATGGGATCAGGTTCAGGCAT+AGG 0.554092 7_2:-7380076 Msa1046740:CDS
TGACCGCCTTGAGAAGCAAA+AGG 0.554824 7_2:+7380811 None:intergenic
CATTATTCTCATAGATGGAA+AGG 0.557104 7_2:-7379746 Msa1046740:three_prime_UTR
GAACTAGAAGCTGAAAAGCC+TGG 0.557523 7_2:+7380943 None:intergenic
TATAATGGATCTATGAACAG+TGG 0.557992 7_2:-7380685 Msa1046740:CDS
AATAATAACATGATGCGTCC+CGG 0.558590 7_2:-7379818 Msa1046740:CDS
CTGGATACATCTCTTACTCC+AGG 0.559189 7_2:-7380742 Msa1046740:CDS
CAGTGGGACCTACTTGCCAC+AGG 0.559703 7_2:-7380668 Msa1046740:CDS
AAATTATTGGACCCAGAGGA+TGG 0.560427 7_2:+7381799 None:intergenic
CTACGGTGGATTGTACTCCC+TGG 0.560818 7_2:-7380761 Msa1046740:CDS
ACTGCTTGCAGACATTGCTC+AGG 0.560991 7_2:-7385607 Msa1046740:CDS
AGAAGCTGAAAAGCCTGGCT+GGG 0.561812 7_2:+7380948 None:intergenic
TTACCTGGCATGTTGGAACC+AGG 0.564606 7_2:+7379845 None:intergenic
TGAGGAGTAAGTTGACCAGT+TGG 0.567121 7_2:+7381030 None:intergenic
TTTGGCGAAATAGATTTGCT+CGG 0.568793 7_2:-7381928 Msa1046740:CDS
GGTTGTGCTGTTGGAGCTTG+GGG 0.568869 7_2:+7380613 None:intergenic
TTTGGGCAGACACATTAAGC+AGG 0.569763 7_2:-7380351 Msa1046740:CDS
ACCAGCTGCTACAATGAAGA+AGG 0.570837 7_2:-7386064 Msa1046740:exon
ACGACACTGGCAAGAATTGG+CGG 0.572387 7_2:-7385447 Msa1046740:CDS
AATGTTCAATTCAATCTCAT+CGG 0.572591 7_2:+7379765 None:intergenic
TGACCAGAATGAGAAGGAAA+AGG 0.572767 7_2:+7380883 None:intergenic
TTTCAATATATTGATTCCAG+TGG 0.573797 7_2:-7385049 Msa1046740:CDS
GAATTGGCGGCATGTCTACA+AGG 0.575568 7_2:-7385434 Msa1046740:intron
CCTGATGTAGCGGGCACAAG+AGG 0.575962 7_2:+7381871 None:intergenic
ATTATGAGGAACGTTATGGT+AGG 0.577264 7_2:-7384346 Msa1046740:CDS
TTATGAGGAACGTTATGGTA+GGG 0.577290 7_2:-7384345 Msa1046740:CDS
GGTTCAGGCATAGGTCGTGC+TGG 0.577633 7_2:-7380067 Msa1046740:CDS
TTCTTTCTTTATCATTCACA+AGG 0.578691 7_2:+7384978 None:intergenic
AATCGTAGAGGTTAGGCAGA+AGG 0.578716 7_2:-7384957 Msa1046740:CDS
AAGACCAATCACTGGAAGCA+AGG 0.579896 7_2:-7382731 Msa1046740:intron
TAGTACTGCTGTTTCTACTC+AGG 0.580365 7_2:-7382277 Msa1046740:CDS
TCAGCGTTGTGTACCAGTGA+CGG 0.580518 7_2:-7379504 Msa1046740:three_prime_UTR
AGGATTATCACTTGCATGAG+GGG 0.581255 7_2:+7382386 None:intergenic
ATCCAGTAGGAGCAGAGGCT+AGG 0.581910 7_2:+7382361 None:intergenic
GGCATGACATCCATGGGTAT+GGG 0.582541 7_2:-7379935 Msa1046740:CDS
GAAGTTGAAAAGGAAGGTGA+AGG 0.582558 7_2:+7381072 None:intergenic
TATTTCGCCAAAATTAGAAG+TGG 0.583832 7_2:+7381939 None:intergenic
TGAGGTGCATGGTGTTGAGA+TGG 0.584126 7_2:+7381336 None:intergenic
TGCTCCTCCTAGTTATGAAG+AGG 0.584725 7_2:-7382559 Msa1046740:CDS
CCAGGAGGCATTCCATTAGG+AGG 0.584810 7_2:+7379863 None:intergenic
GTAGGAGCAGAGGCTAGGCT+AGG 0.585404 7_2:+7382366 None:intergenic
GGAAAGTTTGTGATTTGTGC+CGG 0.585741 7_2:+7380592 None:intergenic
GGTGAAGGTTGGCCAAAAGT+AGG 0.586008 7_2:+7381087 None:intergenic
TGAGGATCCCTGTGGCAAGT+AGG 0.586114 7_2:+7380660 None:intergenic
AGAAGATCCAGTAGGAGCAG+AGG 0.586315 7_2:+7382356 None:intergenic
ATTATGATGATACAAGGAGC+AGG 0.587423 7_2:-7384274 Msa1046740:CDS
CCTAGTTATGAAGAGGCTGT+TGG 0.589371 7_2:-7382552 Msa1046740:CDS
ATTGGGAGCAGGCACTTGAT+GGG 0.590677 7_2:+7380456 None:intergenic
ATCTCAGGTAATGGTGCAGG+AGG 0.590753 7_2:+7381135 None:intergenic
TTGAATGGTGAATCACCAAA+CGG 0.591233 7_2:+7381384 None:intergenic
TAAAGTTGAAGACCAATCAC+TGG 0.591701 7_2:-7382739 Msa1046740:CDS
GGAATCAATATATTGAAAGT+CGG 0.592291 7_2:+7385054 None:intergenic
TTGTGAAGGAAAGCCTGTTG+AGG 0.592434 7_2:+7380642 None:intergenic
GAGGAAGATAGAAATGGCTA+TGG 0.592967 7_2:-7384443 Msa1046740:CDS
AGACACATTAAGCAGGGGAC+TGG 0.593975 7_2:-7380344 Msa1046740:CDS
GCTTGGGGAGTCATTTGTGA+AGG 0.593976 7_2:+7380628 None:intergenic
ACGATGGCCAACACTCGTCT+CGG 0.595349 7_2:-7384223 Msa1046740:intron
ACCACCCATACCCATACCCA+TGG 0.596082 7_2:+7379925 None:intergenic
GAATAAACATACACCACACT+AGG 0.598796 7_2:+7379592 None:intergenic
CCAGGTGGCATGTATAGACC+TGG 0.600336 7_2:-7384527 Msa1046740:CDS
AGAAGATCGTTATGCGAGCA+GGG 0.603296 7_2:-7384465 Msa1046740:CDS
GAACCTGATTCAGATCCAAA+CGG 0.604266 7_2:+7386966 None:intergenic
TAGGATTATCACTTGCATGA+GGG 0.604332 7_2:+7382385 None:intergenic
GAGAAAGGTTGAGTGTCACT+GGG 0.605764 7_2:+7381216 None:intergenic
GTTCAGTAGTCTGAGGTGCA+TGG 0.605954 7_2:+7381325 None:intergenic
ATAATGGATCTATGAACAGT+GGG 0.606177 7_2:-7380684 Msa1046740:CDS
TTGGGCAGACACATTAAGCA+GGG 0.606341 7_2:-7380350 Msa1046740:CDS
GTTCATACCTTTCAGGCACA+GGG 0.607284 7_2:+7382517 None:intergenic
GGGATAGAATAACCTTACTT+GGG 0.607500 7_2:-7379483 Msa1046740:three_prime_UTR
ATGCTACTAGCAATGAACCA+TGG 0.607785 7_2:-7385644 Msa1046740:CDS
TTGAAAAGGAAGGTGAAGGT+TGG 0.609242 7_2:+7381076 None:intergenic
GGAGGAGGCATGACATCCAT+GGG 0.610347 7_2:-7379941 Msa1046740:CDS
CAACTTTACAGACCTGATGT+AGG 0.610482 7_2:+7382216 None:intergenic
GAGGAACGTTATGGTAGGGA+CGG 0.611833 7_2:-7384341 Msa1046740:CDS
GATGATCGGTACAATCGCGA+TGG 0.615288 7_2:-7384386 Msa1046740:CDS
TAATATATCAAACCACCTGT+TGG 0.617109 7_2:+7379421 None:intergenic
TGGCTGTTGAGCATAACCAC+CGG 0.617470 7_2:+7379799 None:intergenic
TCAACCCCTGAAGCAAACAC+TGG 0.617887 7_2:-7381844 Msa1046740:CDS
GCTCAAAGCACCCTAAAGAA+GGG 0.618694 7_2:+7379528 None:intergenic
TCAATGCCAATATCTGCTAA+CGG 0.618831 7_2:+7380184 None:intergenic
CTAGGATTATCACTTGCATG+AGG 0.619253 7_2:+7382384 None:intergenic
TTAAAACCATCTGATTGGGA+TGG 0.619276 7_2:+7381303 None:intergenic
AGGTTTCGCAATAACACACC+AGG 0.624051 7_2:-7384545 Msa1046740:CDS
GGTTGAAATTCCTGATGTAG+CGG 0.624098 7_2:+7381861 None:intergenic
AAACCCAAAATTAGACATGT+CGG 0.624530 7_2:+7381278 None:intergenic
CCAGGTTGACCAGAATGAGA+AGG 0.625884 7_2:+7380877 None:intergenic
TTCTGTAAAGTGACCTAGTG+TGG 0.625999 7_2:-7379605 Msa1046740:three_prime_UTR
CCAGGTCTATACATGCCACC+TGG 0.626376 7_2:+7384527 None:intergenic
CCAGATGAAGTTGAAAAGGA+AGG 0.626716 7_2:+7381066 None:intergenic
TATGCTCAACAGCCATATGG+TGG 0.626869 7_2:-7379791 Msa1046740:CDS
ACTGAACCATCCCAATCAGA+TGG 0.626946 7_2:-7381309 Msa1046740:CDS
ATAAAATCCGAATGTTGATG+TGG 0.628033 7_2:+7379654 None:intergenic
CAAACAAGCGGTCATACCTA+CGG 0.628165 7_2:-7380778 Msa1046740:CDS
TGTGGACTACTAGTAGGCAC+TGG 0.629763 7_2:+7379672 None:intergenic
AGTGTTCCATGAGGACCCCA+TGG 0.630276 7_2:+7385627 None:intergenic
ACTACAATTATGATGATACA+AGG 0.633869 7_2:-7384280 Msa1046740:CDS
CCCGGTGGTATGGGTATGGG+AGG 0.634885 7_2:-7379968 Msa1046740:CDS
CCAGTAGATGACGAAAACCC+AGG 0.635307 7_2:+7380850 None:intergenic
TCCATGGGTATGGGTATGGG+TGG 0.636046 7_2:-7379926 Msa1046740:CDS
GGGTCAAAGAAATCATCAGT+GGG 0.636273 7_2:+7382246 None:intergenic
GGCTGTTGAGCATAACCACC+GGG 0.636968 7_2:+7379800 None:intergenic
GGTGCCGCTGAAATAGCATA+CGG 0.637836 7_2:+7380427 None:intergenic
TGGAGTAAGAGATGTATCCA+GGG 0.638728 7_2:+7380744 None:intergenic
TTTACAGGAGAAGATCCAGT+AGG 0.641156 7_2:+7382348 None:intergenic
TGGGCTCTAGAGATGATGAT+CGG 0.644727 7_2:-7384400 Msa1046740:CDS
TGGAAACGAATTAACGACAC+TGG 0.645325 7_2:-7385460 Msa1046740:CDS
TGGGTCAAAGAAATCATCAG+TGG 0.653510 7_2:+7382245 None:intergenic
TACAAACGAGCAGACTTCAG+CGG 0.653752 7_2:-7382605 Msa1046740:intron
AGGTTGCTGTGCATATGGAC+TGG 0.655391 7_2:+7380903 None:intergenic
AGACCTGATGTAGGACCACG+TGG 0.656943 7_2:+7382225 None:intergenic
TGATAAAGAAAGAATCGTAG+AGG 0.663345 7_2:-7384969 Msa1046740:CDS
TCGGCAGAATCTGCTCCAAG+AGG 0.664433 7_2:-7382414 Msa1046740:CDS
CAATCTACTGCACAAACAAG+CGG 0.666091 7_2:-7380790 Msa1046740:CDS
CCTCCCATACCCATACCACC+GGG 0.667619 7_2:+7379968 None:intergenic
AACGGAACGAATTGGTGCGT+CGG 0.668463 7_2:+7386984 None:intergenic
GCAGTAGATCCTCCATGATG+GGG 0.668568 7_2:+7380571 None:intergenic
AGAGCTTCTTTGGACAACAA+GGG 0.670278 7_2:-7380507 Msa1046740:CDS
ATTGAAATTATTGGACCCAG+AGG 0.671697 7_2:+7381795 None:intergenic
GCAGCTGAGAAACCTTGATG+AGG 0.675499 7_2:+7381012 None:intergenic
CCGCCTTGAGAAGCAAAAGG+TGG 0.677466 7_2:+7380814 None:intergenic
TGATGCTTGATCAGTTGGAG+AGG 0.677645 7_2:+7380543 None:intergenic
GGTTACAGAGATGATGATAG+GGG 0.678995 7_2:-7384320 Msa1046740:CDS
TGGGCAGACACATTAAGCAG+GGG 0.681536 7_2:-7380349 Msa1046740:CDS
ACAGCCTCTTCATAACTAGG+AGG 0.683929 7_2:+7382555 None:intergenic
ATAACAACAACACAGAAGAG+AGG 0.684154 7_2:-7387059 Msa1046740:five_prime_UTR
GATGATTTCTTTGACCCACG+TGG 0.686453 7_2:-7382240 Msa1046740:CDS
TGGGATGGTTCAGTAGTCTG+AGG 0.687217 7_2:+7381318 None:intergenic
TTCACCGTATGCTATTTCAG+CGG 0.691527 7_2:-7380431 Msa1046740:CDS
CCTGCACAAACCCTTCCAAG+TGG 0.692553 7_2:-7380979 Msa1046740:CDS
ACAAGCGGTCATACCTACGG+TGG 0.694635 7_2:-7380775 Msa1046740:CDS
CCTGGCATGTTGGAACCAGG+AGG 0.695127 7_2:+7379848 None:intergenic
GATCGTGATTTCGATGACGA+TGG 0.695675 7_2:-7384239 Msa1046740:CDS
AGTGGGACCTACTTGCCACA+GGG 0.696057 7_2:-7380667 Msa1046740:CDS
CAGGGAGTACAATCCACCGT+AGG 0.701137 7_2:+7380762 None:intergenic
GATGCTTGATCAGTTGGAGA+GGG 0.703924 7_2:+7380544 None:intergenic
GGAATGGGCAATGCTCCCGG+TGG 0.716650 7_2:-7379983 Msa1046740:CDS
TTTCGCAATAACACACCAGG+TGG 0.720741 7_2:-7384542 Msa1046740:CDS
AATAACATGATGCGTCCCGG+TGG 0.724789 7_2:-7379815 Msa1046740:CDS
ACAAACTTTCCCCATCATGG+AGG 0.725140 7_2:-7380580 Msa1046740:CDS
TCTGCAAGCAGTGTTCCATG+AGG 0.732421 7_2:+7385618 None:intergenic
AGATCGTTATGCGAGCAGGG+AGG 0.744423 7_2:-7384462 Msa1046740:CDS
AAGCCTGTTGAGGATCCCTG+TGG 0.751881 7_2:+7380652 None:intergenic
GCTACTAGCAATGAACCATG+GGG 0.772068 7_2:-7385642 Msa1046740:CDS
GACCTGATGTAGGACCACGT+GGG 0.783038 7_2:+7382226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTTGTAAAATA+AGG + chr7_2:7380852-7380871 None:intergenic 10.0%
!!! TTTTAAAAAAAATCATCTTT+CGG + chr7_2:7382411-7382430 None:intergenic 10.0%
!!! TTTTATTTTTGTAAAAAAGT+TGG + chr7_2:7382740-7382759 None:intergenic 10.0%
!! ATATTAAATTTATTGACAAT+TGG - chr7_2:7383097-7383116 Msa1046740:intron 10.0%
!!! TTGATTAAATTTTTCTATGT+AGG - chr7_2:7379964-7379983 Msa1046740:CDS 15.0%
!! ACATAAAAATATAAATGTCT+CGG + chr7_2:7380052-7380071 None:intergenic 15.0%
!!! TTTACTAATTTATCGTTTTA+TGG - chr7_2:7380568-7380587 Msa1046740:CDS 15.0%
!!! TTACTAATTTATCGTTTTAT+GGG - chr7_2:7380569-7380588 Msa1046740:CDS 15.0%
!! GGTTATAATACATAAAATTA+AGG + chr7_2:7380831-7380850 None:intergenic 15.0%
!!! GGTTACATTATAATATTTTA+CGG + chr7_2:7381443-7381462 None:intergenic 15.0%
!!! ATGATTTTTTTTAAAATGCT+TGG - chr7_2:7382415-7382434 Msa1046740:CDS 15.0%
!! TATTCATAATTGGATTAAAA+TGG - chr7_2:7382829-7382848 Msa1046740:intron 15.0%
!!! AGAAATTTATTCTTATGTTT+TGG - chr7_2:7382863-7382882 Msa1046740:intron 15.0%
!!! TACATTGAAGTATTTATTAA+TGG - chr7_2:7383168-7383187 Msa1046740:intron 15.0%
!! AAATACATGCAAATTAATTA+GGG - chr7_2:7383253-7383272 Msa1046740:intron 15.0%
!! ATATTATATTGTATTTCCTT+TGG - chr7_2:7384481-7384500 Msa1046740:CDS 15.0%
!! TATTATATTGTATTTCCTTT+GGG - chr7_2:7384482-7384501 Msa1046740:CDS 15.0%
!!! TTGGTTTTCAATTTTTAAAA+AGG - chr7_2:7385032-7385051 Msa1046740:CDS 15.0%
!! TTATGATTATGCTTATGATT+AGG - chr7_2:7379708-7379727 Msa1046740:three_prime_UTR 20.0%
!!! TTGTGTATGAATTGATTTTT+TGG - chr7_2:7379910-7379929 Msa1046740:CDS 20.0%
!! GTATTATGTTTGTGATTAAT+TGG - chr7_2:7380107-7380126 Msa1046740:CDS 20.0%
!! TATATTAGCTAAACAACAAT+CGG - chr7_2:7380157-7380176 Msa1046740:CDS 20.0%
!!! TTAATGTATAGTTGCTATTT+TGG - chr7_2:7380598-7380617 Msa1046740:CDS 20.0%
!!! TAATGTATAGTTGCTATTTT+GGG - chr7_2:7380599-7380618 Msa1046740:CDS 20.0%
!! TTTGAACAGAAGATAATAAT+TGG - chr7_2:7380756-7380775 Msa1046740:CDS 20.0%
!! AATATGATCACATGATAATA+TGG + chr7_2:7380807-7380826 None:intergenic 20.0%
!! AGAACATTCTTATCAAATAT+CGG - chr7_2:7381334-7381353 Msa1046740:CDS 20.0%
!! ACTAACAGCATATAAATATT+AGG + chr7_2:7381384-7381403 None:intergenic 20.0%
!!! AGGAATATTACATTTTTATC+AGG + chr7_2:7381464-7381483 None:intergenic 20.0%
!!! TGATTTTAGATTGAGTATAA+TGG + chr7_2:7381955-7381974 None:intergenic 20.0%
!!! ATTTTCTTAAACAATTTTCC+AGG - chr7_2:7381988-7382007 Msa1046740:intron 20.0%
!!! ATTTATCAGAGTTGATATAT+AGG + chr7_2:7382361-7382380 None:intergenic 20.0%
!!! TTTTTTTCTTCTTTCTGAAT+TGG - chr7_2:7382496-7382515 Msa1046740:intron 20.0%
!! TTAAGCAATAACATAAAGTA+AGG + chr7_2:7382688-7382707 None:intergenic 20.0%
!! CTTTGATCTTTATTCATAAT+TGG - chr7_2:7382819-7382838 Msa1046740:intron 20.0%
!!! TCTTTATTGATTATTAGAGT+TGG + chr7_2:7382956-7382975 None:intergenic 20.0%
!! GAAATACATGCAAATTAATT+AGG - chr7_2:7383252-7383271 Msa1046740:intron 20.0%
!! TCAAAAAGGATCTTATAAAA+AGG - chr7_2:7383313-7383332 Msa1046740:intron 20.0%
!! GCATAATAATTTCTTAAACA+GGG + chr7_2:7384415-7384434 None:intergenic 20.0%
!! ATTATATTGTATTTCCTTTG+GGG - chr7_2:7384483-7384502 Msa1046740:CDS 20.0%
!! AAATGAATTTGTAAATGACT+TGG - chr7_2:7384846-7384865 Msa1046740:intron 20.0%
!!! TAAGTAGAATTCTGAAAAAT+TGG - chr7_2:7385013-7385032 Msa1046740:CDS 20.0%
!!! TTTTGTTTCAAACTTATCTT+TGG + chr7_2:7386175-7386194 None:intergenic 20.0%
!! ATGTTATTATTATAGTTACC+TGG + chr7_2:7386726-7386745 None:intergenic 20.0%
!!! ACTACAATTCTTTTCTTTTT+TGG - chr7_2:7386997-7387016 Msa1046740:five_prime_UTR 20.0%
!!! CTACAATTCTTTTCTTTTTT+GGG - chr7_2:7386998-7387017 Msa1046740:five_prime_UTR 20.0%
!!! TACAATTCTTTTCTTTTTTG+GGG - chr7_2:7386999-7387018 Msa1046740:five_prime_UTR 20.0%
! GAAAAAACGAAGAAATGAAA+TGG + chr7_2:7379632-7379651 None:intergenic 25.0%
!! AGATTTTCACAACAACATAA+AGG + chr7_2:7380223-7380242 None:intergenic 25.0%
!! GTGCTTGAAAATATATCTTT+TGG - chr7_2:7380340-7380359 Msa1046740:CDS 25.0%
!! AATCTGAGCTTTAATTGAAT+CGG - chr7_2:7380389-7380408 Msa1046740:CDS 25.0%
!!! TTATTTTGTAGATAGCAGTT+TGG - chr7_2:7380439-7380458 Msa1046740:CDS 25.0%
!! TATTTTGTAGATAGCAGTTT+GGG - chr7_2:7380440-7380459 Msa1046740:CDS 25.0%
! TAGCAACTATACATTAAACA+CGG + chr7_2:7380595-7380614 None:intergenic 25.0%
! AAGATAATAATTGGTGTGTA+AGG - chr7_2:7380765-7380784 Msa1046740:CDS 25.0%
! AATTTAGATGTCAAAGCTTA+CGG + chr7_2:7380983-7381002 None:intergenic 25.0%
!! ATGTCTACAAGGTATTAATT+CGG - chr7_2:7381130-7381149 Msa1046740:CDS 25.0%
! GGAATCAATATATTGAAAGT+CGG + chr7_2:7381502-7381521 None:intergenic 25.0%
!!! TTTCAATATATTGATTCCAG+TGG - chr7_2:7381504-7381523 Msa1046740:intron 25.0%
! TTCTTTCTTTATCATTCACA+AGG + chr7_2:7381578-7381597 None:intergenic 25.0%
!! TTCTAGTTATATAAAGCATC+AGG - chr7_2:7381685-7381704 Msa1046740:intron 25.0%
! ATTATGGATTTACCAAAACT+GGG + chr7_2:7381745-7381764 None:intergenic 25.0%
!! GCAAAATAAAGGATTTTCAT+TGG + chr7_2:7381843-7381862 None:intergenic 25.0%
! ACTACAATTATGATGATACA+AGG - chr7_2:7382273-7382292 Msa1046740:CDS 25.0%
!! AAATCATCTTTCGGATTTTA+TGG + chr7_2:7382402-7382421 None:intergenic 25.0%
!!! TTTTTTTAAAATGCTTGGCT+AGG - chr7_2:7382420-7382439 Msa1046740:CDS 25.0%
! GAAAAAAAATGACCAAAACT+CGG + chr7_2:7382484-7382503 None:intergenic 25.0%
! ATGTCTACATAAATACTCAA+GGG + chr7_2:7382566-7382585 None:intergenic 25.0%
! AATAACATAAAGTAAGGATG+AGG + chr7_2:7382682-7382701 None:intergenic 25.0%
! AATTTCAAACTGAAAATGCT+TGG + chr7_2:7382770-7382789 None:intergenic 25.0%
! TATAGCACCTATATCATATA+TGG - chr7_2:7382796-7382815 Msa1046740:intron 25.0%
! ATCAAAGCCATATATGATAT+AGG + chr7_2:7382806-7382825 None:intergenic 25.0%
! ATGCAGTTGAAAATTCAAAA+AGG - chr7_2:7383299-7383318 Msa1046740:intron 25.0%
!! TACAACATAAATGGTATTGA+GGG - chr7_2:7383429-7383448 Msa1046740:intron 25.0%
!!! TAACAACTCGTTTTTTTACA+CGG + chr7_2:7383527-7383546 None:intergenic 25.0%
! TGTTATGCTGAAGAATAATA+AGG - chr7_2:7383542-7383561 Msa1046740:intron 25.0%
! GAATTATCAGAATAGGATTA+TGG - chr7_2:7383638-7383657 Msa1046740:intron 25.0%
! GATAATATTCATAAGAGGTT+CGG + chr7_2:7384096-7384115 None:intergenic 25.0%
! ATCGAGATAATATTCATAAG+AGG + chr7_2:7384101-7384120 None:intergenic 25.0%
! CGCATAATAATTTCTTAAAC+AGG + chr7_2:7384416-7384435 None:intergenic 25.0%
! TCATACCTGATTGAAATTAT+TGG + chr7_2:7384770-7384789 None:intergenic 25.0%
!! GAATCTGTATGATTATTTCT+AGG - chr7_2:7384788-7384807 Msa1046740:intron 25.0%
! ATGTATTCTCAATCACAAAA+TGG - chr7_2:7385844-7385863 Msa1046740:CDS 25.0%
! CAATCACAAAATGGATATAA+TGG - chr7_2:7385853-7385872 Msa1046740:CDS 25.0%
! TTGAAACAAAATCAACAGTT+TGG - chr7_2:7386184-7386203 Msa1046740:intron 25.0%
! TGAAACAAAATCAACAGTTT+GGG - chr7_2:7386185-7386204 Msa1046740:intron 25.0%
! CTGGTTAATTTAAACATATC+TGG - chr7_2:7386228-7386247 Msa1046740:intron 25.0%
!! ATATTTACAGTTGATGTTAC+AGG + chr7_2:7386447-7386466 None:intergenic 25.0%
! TGTAACATCAACTGTAAATA+TGG - chr7_2:7386446-7386465 Msa1046740:intron 25.0%
! GTAACATCAACTGTAAATAT+GGG - chr7_2:7386447-7386466 Msa1046740:intron 25.0%
! AATGTTCAATTCAATCTCAT+CGG + chr7_2:7386791-7386810 None:intergenic 25.0%
! TTGAACATTATTCTCATAGA+TGG - chr7_2:7386802-7386821 Msa1046740:intron 25.0%
! AAAATATGAGGAACATGTAA+AGG + chr7_2:7387105-7387124 None:intergenic 25.0%
!!! ATTTGAATGTTTTAGCTGTG+AGG - chr7_2:7379743-7379762 Msa1046740:three_prime_UTR 30.0%
TCTTCAACATGAATCATTCA+AGG + chr7_2:7379812-7379831 None:intergenic 30.0%
! ATCTGAGCTTTTTATTGAGT+TGG - chr7_2:7380239-7380258 Msa1046740:intron 30.0%
!!! TTTTTATTGAGTTGGATACG+TGG - chr7_2:7380247-7380266 Msa1046740:intron 30.0%
TACGTGGAAAAAATTTGAAG+TGG - chr7_2:7380263-7380282 Msa1046740:intron 30.0%
CAATTAATGGTAACACTTAC+AGG + chr7_2:7380537-7380556 None:intergenic 30.0%
! ACCCTAATCCTATTTTGTAA+CGG - chr7_2:7380640-7380659 Msa1046740:CDS 30.0%
ATTTAGATGTCAAAGCTTAC+GGG + chr7_2:7380982-7381001 None:intergenic 30.0%
ATTCGGAATACTTTATGTTC+TGG - chr7_2:7381147-7381166 Msa1046740:CDS 30.0%
AATCAGTAAATGATGCAGAA+GGG + chr7_2:7381184-7381203 None:intergenic 30.0%
TGATAAAGAAAGAATCGTAG+AGG - chr7_2:7381584-7381603 Msa1046740:intron 30.0%
ATATCAGTAGAATTGTTGAG+AGG + chr7_2:7381649-7381668 None:intergenic 30.0%
!!! TTTTTAATTTCCCCCAGTTT+TGG - chr7_2:7381730-7381749 Msa1046740:intron 30.0%
TTATGGATTTACCAAAACTG+GGG + chr7_2:7381744-7381763 None:intergenic 30.0%
GATTATGGATTTACCAAAAC+TGG + chr7_2:7381746-7381765 None:intergenic 30.0%
GAAATAGAGAAGACAGATTA+TGG + chr7_2:7381761-7381780 None:intergenic 30.0%
TAATCTGTCTTCTCTATTTC+TGG - chr7_2:7381761-7381780 Msa1046740:intron 30.0%
GTATGACATGGAAAAATTGT+GGG - chr7_2:7381890-7381909 Msa1046740:CDS 30.0%
TTATGGAAGAGAAAGAGAAA+TGG - chr7_2:7382133-7382152 Msa1046740:intron 30.0%
TATGGAAGAGAAAGAGAAAT+GGG - chr7_2:7382134-7382153 Msa1046740:intron 30.0%
GCTTAAATGCTTAACTATTG+AGG + chr7_2:7382541-7382560 None:intergenic 30.0%
TGTCTACATAAATACTCAAG+GGG + chr7_2:7382565-7382584 None:intergenic 30.0%
GATGTCTACATAAATACTCA+AGG + chr7_2:7382567-7382586 None:intergenic 30.0%
TGAGTATTTATGTAGACATC+AGG - chr7_2:7382567-7382586 Msa1046740:CDS 30.0%
TATTAATCAAACGTCGTGTT+TGG + chr7_2:7382621-7382640 None:intergenic 30.0%
TCTAGAAGATTGCTTATTTC+CGG - chr7_2:7382649-7382668 Msa1046740:intron 30.0%
GCTTAAAGCTGATGAATTAT+AGG - chr7_2:7382702-7382721 Msa1046740:intron 30.0%
! TGCTTTGGATTTAAAACCAA+AGG - chr7_2:7382914-7382933 Msa1046740:intron 30.0%
ACTAACTTTCTTAATTCCTG+TGG + chr7_2:7383070-7383089 None:intergenic 30.0%
TAATTAATCCTCTCTCTTGA+AGG + chr7_2:7383143-7383162 None:intergenic 30.0%
CAAGTAAGCTACAACATAAA+TGG - chr7_2:7383420-7383439 Msa1046740:intron 30.0%
CTACAACATAAATGGTATTG+AGG - chr7_2:7383428-7383447 Msa1046740:intron 30.0%
TTAGCATGATAAACAAAACG+AGG - chr7_2:7383501-7383520 Msa1046740:intron 30.0%
TTCTGATAATTCGATAGTCA+AGG + chr7_2:7383630-7383649 None:intergenic 30.0%
GACTATCGAATTATCAGAAT+AGG - chr7_2:7383631-7383650 Msa1046740:intron 30.0%
! TTTATGCAATGTTTTCTCAG+AGG - chr7_2:7383782-7383801 Msa1046740:intron 30.0%
GAAACTTTCTGAGCAAAATT+CGG - chr7_2:7383970-7383989 Msa1046740:intron 30.0%
AAACTTTCTGAGCAAAATTC+GGG - chr7_2:7383971-7383990 Msa1046740:intron 30.0%
TATGAAAGTTCATACCTTTC+AGG + chr7_2:7384046-7384065 None:intergenic 30.0%
ATGAATATTATCTCGATTGC+AGG - chr7_2:7384104-7384123 Msa1046740:intron 30.0%
TGAATATTATCTCGATTGCA+GGG - chr7_2:7384105-7384124 Msa1046740:intron 30.0%
TCAGTTGGATTATTGTTTAC+AGG + chr7_2:7384223-7384242 None:intergenic 30.0%
!! TGCTTGTTATTATGTTGTGT+TGG - chr7_2:7384358-7384377 Msa1046740:CDS 30.0%
TTCAACATTATCCCATTAAG+CGG + chr7_2:7384557-7384576 None:intergenic 30.0%
TATTTCGCCAAAATTAGAAG+TGG + chr7_2:7384617-7384636 None:intergenic 30.0%
ATGCACGCTAAATCAAAAAA+GGG + chr7_2:7384905-7384924 None:intergenic 30.0%
TATGCACGCTAAATCAAAAA+AGG + chr7_2:7384906-7384925 None:intergenic 30.0%
AGGTTTATTATCATGCCATA+TGG + chr7_2:7384974-7384993 None:intergenic 30.0%
ATATGGCATGATAATAAACC+TGG - chr7_2:7384973-7384992 Msa1046740:CDS 30.0%
TTATTCAAAGCTAAGAACTG+AGG + chr7_2:7385065-7385084 None:intergenic 30.0%
AAACCCAAAATTAGACATGT+CGG + chr7_2:7385278-7385297 None:intergenic 30.0%
!!! ACATGTCTAATTTTGGGTTT+GGG - chr7_2:7385278-7385297 Msa1046740:CDS 30.0%
AATATCAGTTTCCGAATCTT+GGG + chr7_2:7385383-7385402 None:intergenic 30.0%
!! TATAATGGATCTATGAACAG+TGG - chr7_2:7385868-7385887 Msa1046740:CDS 30.0%
!! ATAATGGATCTATGAACAGT+GGG - chr7_2:7385869-7385888 Msa1046740:intron 30.0%
GGTTGAGAAACTAAAGAATT+TGG + chr7_2:7386150-7386169 None:intergenic 30.0%
GTTTCAAACTTATCTTTGGA+TGG + chr7_2:7386171-7386190 None:intergenic 30.0%
ATTCTAATGCTGATCTTATC+TGG - chr7_2:7386301-7386320 Msa1046740:intron 30.0%
TTGACTTCGAATCCATTAAT+AGG - chr7_2:7386388-7386407 Msa1046740:intron 30.0%
! TCTCTTTTCCTTCCTATTAA+TGG + chr7_2:7386403-7386422 None:intergenic 30.0%
TAATAGGAAGGAAAAGAGAA+TGG - chr7_2:7386404-7386423 Msa1046740:intron 30.0%
TGTAAATATGGGTAAAGCTA+TGG - chr7_2:7386458-7386477 Msa1046740:intron 30.0%
GTAAATATGGGTAAAGCTAT+GGG - chr7_2:7386459-7386478 Msa1046740:intron 30.0%
CATTATTCTCATAGATGGAA+AGG - chr7_2:7386807-7386826 Msa1046740:intron 30.0%
ATAAAATCCGAATGTTGATG+TGG + chr7_2:7386902-7386921 None:intergenic 30.0%
! GTTGGTGTTCAAAAAATATG+AGG + chr7_2:7387117-7387136 None:intergenic 30.0%
!!! CATATTTTTTGAACACCAAC+AGG - chr7_2:7387117-7387136 Msa1046740:five_prime_UTR 30.0%
TAATATATCAAACCACCTGT+TGG + chr7_2:7387135-7387154 None:intergenic 30.0%
ATAACAACAACACAGAAGAG+AGG - chr7_2:7379494-7379513 Msa1046740:three_prime_UTR 35.0%
!!! TGAGTTTTTGAGATGTGATG+TGG - chr7_2:7379858-7379877 Msa1046740:CDS 35.0%
TACGTAGCAAAAATTTGACG+TGG - chr7_2:7380413-7380432 Msa1046740:CDS 35.0%
! GCTACAATGAAGAAGGTTTT+TGG - chr7_2:7380496-7380515 Msa1046740:CDS 35.0%
!!! AGGTTTTTGGTCAAACTGTT+AGG - chr7_2:7380509-7380528 Msa1046740:CDS 35.0%
!!! GGTTTTTGGTCAAACTGTTA+GGG - chr7_2:7380510-7380529 Msa1046740:CDS 35.0%
GCCGTTACAAAATAGGATTA+GGG + chr7_2:7380644-7380663 None:intergenic 35.0%
AGCCGTTACAAAATAGGATT+AGG + chr7_2:7380645-7380664 None:intergenic 35.0%
AGAGTTAGCCGTTACAAAAT+AGG + chr7_2:7380651-7380670 None:intergenic 35.0%
CAATCAGTAAATGATGCAGA+AGG + chr7_2:7381185-7381204 None:intergenic 35.0%
TTTGACAGTACTTGAGTACT+TGG - chr7_2:7381274-7381293 Msa1046740:CDS 35.0%
ACGGTCATTTGATCAAAACT+AGG + chr7_2:7381424-7381443 None:intergenic 35.0%
AAGAAAGAATCGTAGAGGTT+AGG - chr7_2:7381589-7381608 Msa1046740:intron 35.0%
TATGGATTTACCAAAACTGG+GGG + chr7_2:7381743-7381762 None:intergenic 35.0%
GGTATGACATGGAAAAATTG+TGG - chr7_2:7381889-7381908 Msa1046740:CDS 35.0%
GATAGAAATGGCTATGGTTA+TGG - chr7_2:7382116-7382135 Msa1046740:intron 35.0%
TCGTTATGGTAGAGATTATG+AGG - chr7_2:7382193-7382212 Msa1046740:intron 35.0%
AGAGATTATGAGGAACGTTA+TGG - chr7_2:7382203-7382222 Msa1046740:intron 35.0%
ATTATGAGGAACGTTATGGT+AGG - chr7_2:7382207-7382226 Msa1046740:intron 35.0%
TTATGAGGAACGTTATGGTA+GGG - chr7_2:7382208-7382227 Msa1046740:intron 35.0%
ATTATGATGATACAAGGAGC+AGG - chr7_2:7382279-7382298 Msa1046740:CDS 35.0%
TCTACATAAATACTCAAGGG+GGG + chr7_2:7382563-7382582 None:intergenic 35.0%
GTCTACATAAATACTCAAGG+GGG + chr7_2:7382564-7382583 None:intergenic 35.0%
GATTATTAGAGTTGGCAACT+GGG + chr7_2:7382948-7382967 None:intergenic 35.0%
TGATTATTAGAGTTGGCAAC+TGG + chr7_2:7382949-7382968 None:intergenic 35.0%
AATTCCTGTGGTTTACTCAA+GGG + chr7_2:7383058-7383077 None:intergenic 35.0%
TAATTCCTGTGGTTTACTCA+AGG + chr7_2:7383059-7383078 None:intergenic 35.0%
AACATTATCCTTCAAGAGAG+AGG - chr7_2:7383132-7383151 Msa1046740:intron 35.0%
CATGACTACAGACTCTAAAT+GGG + chr7_2:7383587-7383606 None:intergenic 35.0%
ACATGACTACAGACTCTAAA+TGG + chr7_2:7383588-7383607 None:intergenic 35.0%
CAGAATAGGATTATGGCTTT+AGG - chr7_2:7383645-7383664 Msa1046740:intron 35.0%
TAAAGTTGAAGACCAATCAC+TGG - chr7_2:7383814-7383833 Msa1046740:intron 35.0%
GGTATGAACTTTCATACAAG+AGG - chr7_2:7384050-7384069 Msa1046740:intron 35.0%
TAGGATTATCACTTGCATGA+GGG + chr7_2:7384171-7384190 None:intergenic 35.0%
TCAACATTATCCCATTAAGC+GGG + chr7_2:7384556-7384575 None:intergenic 35.0%
! TTTGGCGAAATAGATTTGCT+CGG - chr7_2:7384625-7384644 Msa1046740:intron 35.0%
ATTGAAATTATTGGACCCAG+AGG + chr7_2:7384761-7384780 None:intergenic 35.0%
TGGGTCCAATAATTTCAATC+AGG - chr7_2:7384762-7384781 Msa1046740:intron 35.0%
ACGCTAAATCAAAAAAGGGT+GGG + chr7_2:7384901-7384920 None:intergenic 35.0%
CATAACTGTAACTAGTGTGT+GGG - chr7_2:7384922-7384941 Msa1046740:intron 35.0%
TTGAATGGTGAATCACCAAA+CGG + chr7_2:7385172-7385191 None:intergenic 35.0%
TTAAAACCATCTGATTGGGA+TGG + chr7_2:7385253-7385272 None:intergenic 35.0%
GGCATTAAAACCATCTGATT+GGG + chr7_2:7385257-7385276 None:intergenic 35.0%
! AATGCCGACATGTCTAATTT+TGG - chr7_2:7385271-7385290 Msa1046740:CDS 35.0%
! ATGCCGACATGTCTAATTTT+GGG - chr7_2:7385272-7385291 Msa1046740:CDS 35.0%
!!! GACATGTCTAATTTTGGGTT+TGG - chr7_2:7385277-7385296 Msa1046740:CDS 35.0%
!!! CATGTCTAATTTTGGGTTTG+GGG - chr7_2:7385279-7385298 Msa1046740:CDS 35.0%
GAATATCAGTTTCCGAATCT+TGG + chr7_2:7385384-7385403 None:intergenic 35.0%
TGGGTATATGATGAGCTAAA+GGG + chr7_2:7386081-7386100 None:intergenic 35.0%
ATGGGTATATGATGAGCTAA+AGG + chr7_2:7386082-7386101 None:intergenic 35.0%
ACTAATCCGTTAGCAGATAT+TGG - chr7_2:7386363-7386382 Msa1046740:intron 35.0%
TCAATGCCAATATCTGCTAA+CGG + chr7_2:7386372-7386391 None:intergenic 35.0%
CTTCGAATCCATTAATAGGA+AGG - chr7_2:7386392-7386411 Msa1046740:intron 35.0%
ACCTAATCCAAATTCGATGA+TGG - chr7_2:7386524-7386543 Msa1046740:intron 35.0%
CCTAATCCAAATTCGATGAT+GGG - chr7_2:7386525-7386544 Msa1046740:intron 35.0%
ATTATAGTTACCTGGCATGT+TGG + chr7_2:7386718-7386737 None:intergenic 35.0%
AATAATAACATGATGCGTCC+CGG - chr7_2:7386735-7386754 Msa1046740:intron 35.0%
TAGTAGTCCACATCAACATT+CGG - chr7_2:7386892-7386911 Msa1046740:intron 35.0%
GAATAAACATACACCACACT+AGG + chr7_2:7386964-7386983 None:intergenic 35.0%
GGGATAGAATAACCTTACTT+GGG - chr7_2:7387070-7387089 Msa1046740:five_prime_UTR 35.0%
!!! ATTTTTTGAACACCAACAGG+TGG - chr7_2:7387120-7387139 Msa1046740:five_prime_UTR 35.0%
GAACCTGATTCAGATCCAAA+CGG + chr7_2:7379590-7379609 None:intergenic 40.0%
TTGAGATGTGATGTGGTGTT+TGG - chr7_2:7379865-7379884 Msa1046740:CDS 40.0%
AGCTAACCATCAATCGAGAA+CGG - chr7_2:7380318-7380337 Msa1046740:intron 40.0%
!! AAGAAAGTGCTCAAAGTTCC+TGG - chr7_2:7380704-7380723 Msa1046740:CDS 40.0%
TTTACCTTCTGTTCAATGCC+AGG + chr7_2:7380725-7380744 None:intergenic 40.0%
ATGCTACTAGCAATGAACCA+TGG - chr7_2:7380909-7380928 Msa1046740:CDS 40.0%
TGCTACTAGCAATGAACCAT+GGG - chr7_2:7380910-7380929 Msa1046740:CDS 40.0%
ATCTGGTATTCATGACTGCA+GGG + chr7_2:7381057-7381076 None:intergenic 40.0%
AGACTACTGACATGATCATC+TGG + chr7_2:7381074-7381093 None:intergenic 40.0%
AGATGATCATGTCAGTAGTC+TGG - chr7_2:7381073-7381092 Msa1046740:CDS 40.0%
TGGAAACGAATTAACGACAC+TGG - chr7_2:7381093-7381112 Msa1046740:CDS 40.0%
TTAACGACACTGGCAAGAAT+TGG - chr7_2:7381103-7381122 Msa1046740:CDS 40.0%
ACTGCTCACTGTTCATTAAC+AGG - chr7_2:7381250-7381269 Msa1046740:CDS 40.0%
CTGTTAGTCAATTTCCACAC+AGG - chr7_2:7381396-7381415 Msa1046740:CDS 40.0%
ATCAAAACTAGGTACCTGTG+TGG + chr7_2:7381413-7381432 None:intergenic 40.0%
GAGATCAAGGAAACAATGTC+AGG - chr7_2:7381529-7381548 Msa1046740:intron 40.0%
! TGGGTGTTGTGGCAAAATAA+AGG + chr7_2:7381854-7381873 None:intergenic 40.0%
TACCACCAGTTACAAGAGTT+GGG + chr7_2:7381873-7381892 None:intergenic 40.0%
ATACCACCAGTTACAAGAGT+TGG + chr7_2:7381874-7381893 None:intergenic 40.0%
TTGTAACTGGTGGTATGACA+TGG - chr7_2:7381878-7381897 Msa1046740:CDS 40.0%
GAGGAAGATAGAAATGGCTA+TGG - chr7_2:7382110-7382129 Msa1046740:intron 40.0%
ACGGTTACAGAGATGATGAT+AGG - chr7_2:7382231-7382250 Msa1046740:CDS 40.0%
CGGTTACAGAGATGATGATA+GGG - chr7_2:7382232-7382251 Msa1046740:CDS 40.0%
GGTTACAGAGATGATGATAG+GGG - chr7_2:7382233-7382252 Msa1046740:CDS 40.0%
! GTAGACATCAGGATTTTCGA+TGG - chr7_2:7382578-7382597 Msa1046740:CDS 40.0%
CATAAAGTAAGGATGAGGCT+AGG + chr7_2:7382677-7382696 None:intergenic 40.0%
CCAAAGCAACAAATCTAAGC+AGG + chr7_2:7382902-7382921 None:intergenic 40.0%
!! CCTGCTTAGATTTGTTGCTT+TGG - chr7_2:7382899-7382918 Msa1046740:intron 40.0%
ATTCCTGTGGTTTACTCAAG+GGG + chr7_2:7383057-7383076 None:intergenic 40.0%
TTTACCTTGCTTCCAGTGAT+TGG + chr7_2:7383829-7383848 None:intergenic 40.0%
TGAACTTTCATACAAGAGGC+TGG - chr7_2:7384054-7384073 Msa1046740:intron 40.0%
TTGCAGGGATGTTGAAACTT+CGG - chr7_2:7384120-7384139 Msa1046740:intron 40.0%
AGGATTATCACTTGCATGAG+GGG + chr7_2:7384170-7384189 None:intergenic 40.0%
CTAGGATTATCACTTGCATG+AGG + chr7_2:7384172-7384191 None:intergenic 40.0%
TTTACAGGAGAAGATCCAGT+AGG + chr7_2:7384208-7384227 None:intergenic 40.0%
!! TAGTACTGCTGTTTCTACTC+AGG - chr7_2:7384276-7384295 Msa1046740:CDS 40.0%
GGGTCAAAGAAATCATCAGT+GGG + chr7_2:7384310-7384329 None:intergenic 40.0%
TGGGTCAAAGAAATCATCAG+TGG + chr7_2:7384311-7384330 None:intergenic 40.0%
CAACTTTACAGACCTGATGT+AGG + chr7_2:7384340-7384359 None:intergenic 40.0%
! TTGTATTTCCTTTGGGGAGT+TGG - chr7_2:7384489-7384508 Msa1046740:CDS 40.0%
! TTGTAATTTGCCCCGCTTAA+TGG - chr7_2:7384542-7384561 Msa1046740:CDS 40.0%
! TGTAATTTGCCCCGCTTAAT+GGG - chr7_2:7384543-7384562 Msa1046740:CDS 40.0%
CAACATTATCCCATTAAGCG+GGG + chr7_2:7384555-7384574 None:intergenic 40.0%
! GCTCCAACCACTTCTAATTT+TGG - chr7_2:7384607-7384626 Msa1046740:intron 40.0%
TCGCCAAAATTAGAAGTGGT+TGG + chr7_2:7384613-7384632 None:intergenic 40.0%
GTTGAAATTCCTGATGTAGC+GGG + chr7_2:7384694-7384713 None:intergenic 40.0%
GGTTGAAATTCCTGATGTAG+CGG + chr7_2:7384695-7384714 None:intergenic 40.0%
TTGAACCAGTGTTTGCTTCA+GGG + chr7_2:7384717-7384736 None:intergenic 40.0%
AAATTATTGGACCCAGAGGA+TGG + chr7_2:7384757-7384776 None:intergenic 40.0%
CGCTAAATCAAAAAAGGGTG+GGG + chr7_2:7384900-7384919 None:intergenic 40.0%
CACGCTAAATCAAAAAAGGG+TGG + chr7_2:7384902-7384921 None:intergenic 40.0%
GCATAACTGTAACTAGTGTG+TGG - chr7_2:7384921-7384940 Msa1046740:intron 40.0%
CTGTCACGAAATGTACCATA+TGG - chr7_2:7384956-7384975 Msa1046740:CDS 40.0%
!! CAGTCTTTTGAAGATCCGTT+TGG - chr7_2:7385154-7385173 Msa1046740:intron 40.0%
! GTTTGGTGATTCACCATTCA+AGG - chr7_2:7385171-7385190 Msa1046740:intron 40.0%
!! ACAGAAGTATCAGCCTTGAA+TGG + chr7_2:7385187-7385206 None:intergenic 40.0%
CGGCATTAAAACCATCTGAT+TGG + chr7_2:7385258-7385277 None:intergenic 40.0%
CGAATCTTGGGACAAAAACT+GGG + chr7_2:7385371-7385390 None:intergenic 40.0%
! CCAGTTTTTGTCCCAAGATT+CGG - chr7_2:7385369-7385388 Msa1046740:intron 40.0%
TGTGATGTCATCTCAGGTAA+TGG + chr7_2:7385430-7385449 None:intergenic 40.0%
! AACAGTTCAGCTCCTACTTT+TGG - chr7_2:7385454-7385473 Msa1046740:CDS 40.0%
TTGAAAAGGAAGGTGAAGGT+TGG + chr7_2:7385480-7385499 None:intergenic 40.0%
GAAGTTGAAAAGGAAGGTGA+AGG + chr7_2:7385484-7385503 None:intergenic 40.0%
CCAGATGAAGTTGAAAAGGA+AGG + chr7_2:7385490-7385509 None:intergenic 40.0%
! CCTTCCTTTTCAACTTCATC+TGG - chr7_2:7385487-7385506 Msa1046740:CDS 40.0%
TGGTCCAGATGAAGTTGAAA+AGG + chr7_2:7385494-7385513 None:intergenic 40.0%
! TGACCAGTTGGTTCAGAAAA+TGG + chr7_2:7385514-7385533 None:intergenic 40.0%
GGAAAATTGACCACTTGGAA+GGG + chr7_2:7385587-7385606 None:intergenic 40.0%
! CAACCTTTTCCTTCTCATTC+TGG - chr7_2:7385667-7385686 Msa1046740:intron 40.0%
TGACCAGAATGAGAAGGAAA+AGG + chr7_2:7385673-7385692 None:intergenic 40.0%
CAATCTACTGCACAAACAAG+CGG - chr7_2:7385763-7385782 Msa1046740:intron 40.0%
TGGAGTAAGAGATGTATCCA+GGG + chr7_2:7385812-7385831 None:intergenic 40.0%
!! GAATACATGTTTTGAGCTCC+TGG + chr7_2:7385832-7385851 None:intergenic 40.0%
! GGAAAGTTTGTGATTTGTGC+CGG + chr7_2:7385964-7385983 None:intergenic 40.0%
ATCACAAACTTTCCCCATCA+TGG - chr7_2:7385970-7385989 Msa1046740:intron 40.0%
AACTGTGATGCTTGATCAGT+TGG + chr7_2:7386018-7386037 None:intergenic 40.0%
TTCAACAACCAGAGCTTCTT+TGG - chr7_2:7386036-7386055 Msa1046740:intron 40.0%
AGAGCTTCTTTGGACAACAA+GGG - chr7_2:7386046-7386065 Msa1046740:CDS 40.0%
! ATAGCATACGGTGAAGCATT+GGG + chr7_2:7386117-7386136 None:intergenic 40.0%
AATAGCATACGGTGAAGCAT+TGG + chr7_2:7386118-7386137 None:intergenic 40.0%
!! TTCACCGTATGCTATTTCAG+CGG - chr7_2:7386122-7386141 Msa1046740:intron 40.0%
GATGTTACAGGTGTGTTAGT+GGG + chr7_2:7386435-7386454 None:intergenic 40.0%
TGATGTTACAGGTGTGTTAG+TGG + chr7_2:7386436-7386455 None:intergenic 40.0%
CCCATCATCGAATTTGGATT+AGG + chr7_2:7386528-7386547 None:intergenic 40.0%
!! AGTAGGCACTGGTATTGATA+TGG + chr7_2:7386873-7386892 None:intergenic 40.0%
! TGTTGATGTGGACTACTAGT+AGG + chr7_2:7386890-7386909 None:intergenic 40.0%
TTCTGTAAAGTGACCTAGTG+TGG - chr7_2:7386948-7386967 Msa1046740:intron 40.0%
CGGGATAGAATAACCTTACT+TGG - chr7_2:7387069-7387088 Msa1046740:five_prime_UTR 40.0%
AGGAAGCAATAACCCAAGTA+AGG + chr7_2:7387085-7387104 None:intergenic 40.0%
CAGATCCAAACGGAACGAAT+TGG + chr7_2:7379580-7379599 None:intergenic 45.0%
GTTCCGTTTGGATCTGAATC+AGG - chr7_2:7379584-7379603 Msa1046740:three_prime_UTR 45.0%
! AGATAGCAGTTTGGGCCTTT+TGG - chr7_2:7380448-7380467 Msa1046740:CDS 45.0%
ACCAGCTGCTACAATGAAGA+AGG - chr7_2:7380489-7380508 Msa1046740:CDS 45.0%
ACCTTCTTCATTGTAGCAGC+TGG + chr7_2:7380493-7380512 None:intergenic 45.0%
! AGTTCCTGGCATTGAACAGA+AGG - chr7_2:7380718-7380737 Msa1046740:CDS 45.0%
TGATTTCTATCCCCTCTACC+AGG - chr7_2:7380880-7380899 Msa1046740:CDS 45.0%
AGCATCAAGAACCTGGTAGA+GGG + chr7_2:7380894-7380913 None:intergenic 45.0%
TAGCATCAAGAACCTGGTAG+AGG + chr7_2:7380895-7380914 None:intergenic 45.0%
TGCTAGTAGCATCAAGAACC+TGG + chr7_2:7380901-7380920 None:intergenic 45.0%
GCTACTAGCAATGAACCATG+GGG - chr7_2:7380911-7380930 Msa1046740:CDS 45.0%
CATCTGGTATTCATGACTGC+AGG + chr7_2:7381058-7381077 None:intergenic 45.0%
GACAGTACTTGAGTACTTGG+TGG - chr7_2:7381277-7381296 Msa1046740:CDS 45.0%
GTCGGACAAAGTCTGTTCAT+AGG + chr7_2:7381484-7381503 None:intergenic 45.0%
GATTCCAGTGGAAGAGATCA+AGG - chr7_2:7381516-7381535 Msa1046740:intron 45.0%
GTTTCCTTGATCTCTTCCAC+TGG + chr7_2:7381523-7381542 None:intergenic 45.0%
AATCGTAGAGGTTAGGCAGA+AGG - chr7_2:7381596-7381615 Msa1046740:intron 45.0%
GCAGAAGGCTGCTGTTAATA+GGG - chr7_2:7381611-7381630 Msa1046740:intron 45.0%
! GTTACAAGAGTTGGGTGTTG+TGG + chr7_2:7381865-7381884 None:intergenic 45.0%
CAACACCCAACTCTTGTAAC+TGG - chr7_2:7381865-7381884 Msa1046740:CDS 45.0%
GGAAAAATTGTGGGTCTCGT+TGG - chr7_2:7381899-7381918 Msa1046740:CDS 45.0%
! TGGTGTGTTATTGCGAAACC+TGG + chr7_2:7382009-7382028 None:intergenic 45.0%
AGGTTTCGCAATAACACACC+AGG - chr7_2:7382008-7382027 Msa1046740:intron 45.0%
TTTCGCAATAACACACCAGG+TGG - chr7_2:7382011-7382030 Msa1046740:intron 45.0%
!! CACTCAAGCATTGGAAGCTA+TGG - chr7_2:7382053-7382072 Msa1046740:intron 45.0%
AAGAAGATCGTTATGCGAGC+AGG - chr7_2:7382087-7382106 Msa1046740:intron 45.0%
AGAAGATCGTTATGCGAGCA+GGG - chr7_2:7382088-7382107 Msa1046740:intron 45.0%
AGCAGGGAGGAAGATAGAAA+TGG - chr7_2:7382104-7382123 Msa1046740:intron 45.0%
!! TGGGCTCTAGAGATGATGAT+CGG - chr7_2:7382153-7382172 Msa1046740:intron 45.0%
AATCGCGATGGAGATCGTTA+TGG - chr7_2:7382179-7382198 Msa1046740:intron 45.0%
GATCGTGATTTCGATGACGA+TGG - chr7_2:7382314-7382333 Msa1046740:CDS 45.0%
TTCCTGTGGTTTACTCAAGG+GGG + chr7_2:7383056-7383075 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_2:7383201-7383220 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_2:7383202-7383221 None:intergenic 45.0%
AAGACCAATCACTGGAAGCA+AGG - chr7_2:7383822-7383841 Msa1046740:intron 45.0%
TACAAACGAGCAGACTTCAG+CGG - chr7_2:7383948-7383967 Msa1046740:intron 45.0%
TGCTCCTCCTAGTTATGAAG+AGG - chr7_2:7383994-7384013 Msa1046740:intron 45.0%
ACAGCCTCTTCATAACTAGG+AGG + chr7_2:7384001-7384020 None:intergenic 45.0%
CCAACAGCCTCTTCATAACT+AGG + chr7_2:7384004-7384023 None:intergenic 45.0%
CCTAGTTATGAAGAGGCTGT+TGG - chr7_2:7384001-7384020 Msa1046740:intron 45.0%
GTTCATACCTTTCAGGCACA+GGG + chr7_2:7384039-7384058 None:intergenic 45.0%
AGTTCATACCTTTCAGGCAC+AGG + chr7_2:7384040-7384059 None:intergenic 45.0%
!!! GAGGTTCGGTTTTGAACAAG+TGG + chr7_2:7384082-7384101 None:intergenic 45.0%
ACTAGCAGCAACAGATGTAC+TGG + chr7_2:7384260-7384279 None:intergenic 45.0%
GATGATTTCTTTGACCCACG+TGG - chr7_2:7384313-7384332 Msa1046740:CDS 45.0%
TGAACCAGTGTTTGCTTCAG+GGG + chr7_2:7384716-7384735 None:intergenic 45.0%
GTTGAACCAGTGTTTGCTTC+AGG + chr7_2:7384718-7384737 None:intergenic 45.0%
ATCAAAAAAGGGTGGGGACA+AGG + chr7_2:7384894-7384913 None:intergenic 45.0%
AACTGTAACTAGTGTGTGGG+TGG - chr7_2:7384925-7384944 Msa1046740:intron 45.0%
ACTGTAACTAGTGTGTGGGT+GGG - chr7_2:7384926-7384945 Msa1046740:intron 45.0%
! ACTCAGTTTGTTCAACGACC+AGG + chr7_2:7384994-7385013 None:intergenic 45.0%
ACTGAACCATCCCAATCAGA+TGG - chr7_2:7385244-7385263 Msa1046740:CDS 45.0%
! GAGAAAGGTTGAGTGTCACT+GGG + chr7_2:7385340-7385359 None:intergenic 45.0%
AGAGAAAGGTTGAGTGTCAC+TGG + chr7_2:7385341-7385360 None:intergenic 45.0%
AACTGGGAGTTAGCAGAGAA+AGG + chr7_2:7385355-7385374 None:intergenic 45.0%
CCGAATCTTGGGACAAAAAC+TGG + chr7_2:7385372-7385391 None:intergenic 45.0%
TTCTGCTGTGATGTCATCTC+AGG + chr7_2:7385436-7385455 None:intergenic 45.0%
! GGACCATTTTCTGAACCAAC+TGG - chr7_2:7385508-7385527 Msa1046740:intron 45.0%
! TGAGGAGTAAGTTGACCAGT+TGG + chr7_2:7385526-7385545 None:intergenic 45.0%
GGTCAACTTACTCCTCATCA+AGG - chr7_2:7385529-7385548 Msa1046740:intron 45.0%
!! AAGGGTTTGTGCAGGTTGAT+TGG + chr7_2:7385569-7385588 None:intergenic 45.0%
GGGAAAATTGACCACTTGGA+AGG + chr7_2:7385588-7385607 None:intergenic 45.0%
GAACTAGAAGCTGAAAAGCC+TGG + chr7_2:7385613-7385632 None:intergenic 45.0%
GGAAAAGGTTGCTGTGCATA+TGG + chr7_2:7385658-7385677 None:intergenic 45.0%
CAAAAGGTGGCTGCATAGAA+TGG + chr7_2:7385729-7385748 None:intergenic 45.0%
CAAACAAGCGGTCATACCTA+CGG - chr7_2:7385775-7385794 Msa1046740:intron 45.0%
CTGGAGTAAGAGATGTATCC+AGG + chr7_2:7385813-7385832 None:intergenic 45.0%
CTGGATACATCTCTTACTCC+AGG - chr7_2:7385811-7385830 Msa1046740:intron 45.0%
TTGTGAAGGAAAGCCTGTTG+AGG + chr7_2:7385914-7385933 None:intergenic 45.0%
ACAAACTTTCCCCATCATGG+AGG - chr7_2:7385973-7385992 Msa1046740:intron 45.0%
AGCAGTAGATCCTCCATGAT+GGG + chr7_2:7385986-7386005 None:intergenic 45.0%
AAGCAGTAGATCCTCCATGA+TGG + chr7_2:7385987-7386006 None:intergenic 45.0%
GATGCTTGATCAGTTGGAGA+GGG + chr7_2:7386012-7386031 None:intergenic 45.0%
TGATGCTTGATCAGTTGGAG+AGG + chr7_2:7386013-7386032 None:intergenic 45.0%
! CTTGTTGTCCAAAGAAGCTC+TGG + chr7_2:7386047-7386066 None:intergenic 45.0%
CAGAGCTTCTTTGGACAACA+AGG - chr7_2:7386045-7386064 Msa1046740:CDS 45.0%
TTTGGGCAGACACATTAAGC+AGG - chr7_2:7386202-7386221 Msa1046740:intron 45.0%
TTGGGCAGACACATTAAGCA+GGG - chr7_2:7386203-7386222 Msa1046740:intron 45.0%
ATGGGTAAAGCTATGGGATC+AGG - chr7_2:7386465-7386484 Msa1046740:intron 45.0%
AAAGCTATGGGATCAGGTTC+AGG - chr7_2:7386471-7386490 Msa1046740:intron 45.0%
CCAGAACCCATCATCGAATT+TGG + chr7_2:7386534-7386553 None:intergenic 45.0%
!! CCAAATTCGATGATGGGTTC+TGG - chr7_2:7386531-7386550 Msa1046740:intron 45.0%
!! TTCGATGATGGGTTCTGGTA+TGG - chr7_2:7386536-7386555 Msa1046740:intron 45.0%
!! TCGATGATGGGTTCTGGTAT+GGG - chr7_2:7386537-7386556 Msa1046740:intron 45.0%
ACATCCATGGGTATGGGTAT+GGG - chr7_2:7386624-7386643 Msa1046740:intron 45.0%
TACCAGATGCAACCTCCTAA+TGG - chr7_2:7386678-7386697 Msa1046740:intron 45.0%
TTCCATTAGGAGGTTGCATC+TGG + chr7_2:7386683-7386702 None:intergenic 45.0%
GGTTATGCTCAACAGCCATA+TGG - chr7_2:7386759-7386778 Msa1046740:intron 45.0%
TATGCTCAACAGCCATATGG+TGG - chr7_2:7386762-7386781 Msa1046740:intron 45.0%
TCTCATCGGTATCCACCATA+TGG + chr7_2:7386777-7386796 None:intergenic 45.0%
!!! TTTTGGGGTCACCCTTCTTT+AGG - chr7_2:7387014-7387033 Msa1046740:five_prime_UTR 45.0%
! TTTGGGGTCACCCTTCTTTA+GGG - chr7_2:7387015-7387034 Msa1046740:five_prime_UTR 45.0%
! GCTCAAAGCACCCTAAAGAA+GGG + chr7_2:7387028-7387047 None:intergenic 45.0%
! TGCTCAAAGCACCCTAAAGA+AGG + chr7_2:7387029-7387048 None:intergenic 45.0%
AGGTTATTCTATCCCGTCAC+TGG + chr7_2:7387065-7387084 None:intergenic 45.0%
!! AATAATTAATTATCAATTAA+TGG + chr7_2:7380550-7380569 None:intergenic 5.0%
AACGGAACGAATTGGTGCGT+CGG + chr7_2:7379572-7379591 None:intergenic 50.0%
ACGCACCAATTCGTTCCGTT+TGG - chr7_2:7379572-7379591 Msa1046740:three_prime_UTR 50.0%
! CAAGCACCGTTCTCGATTGA+TGG + chr7_2:7380327-7380346 None:intergenic 50.0%
GCATCAAGAACCTGGTAGAG+GGG + chr7_2:7380893-7380912 None:intergenic 50.0%
AATGAACCATGGGGTCCTCA+TGG - chr7_2:7380920-7380939 Msa1046740:CDS 50.0%
TCTGCAAGCAGTGTTCCATG+AGG + chr7_2:7380938-7380957 None:intergenic 50.0%
ACTGCTTGCAGACATTGCTC+AGG - chr7_2:7380946-7380965 Msa1046740:CDS 50.0%
ACGACACTGGCAAGAATTGG+CGG - chr7_2:7381106-7381125 Msa1046740:CDS 50.0%
GAATTGGCGGCATGTCTACA+AGG - chr7_2:7381119-7381138 Msa1046740:CDS 50.0%
! CTTGAGTACTTGGTGGCTCA+TGG - chr7_2:7381284-7381303 Msa1046740:CDS 50.0%
GGCAGAAGGCTGCTGTTAAT+AGG - chr7_2:7381610-7381629 Msa1046740:intron 50.0%
CACCCAACTCTTGTAACTGG+TGG - chr7_2:7381868-7381887 Msa1046740:CDS 50.0%
CCAATGCTTGAGTGTGAACC+AGG + chr7_2:7382047-7382066 None:intergenic 50.0%
CCTGGTTCACACTCAAGCAT+TGG - chr7_2:7382044-7382063 Msa1046740:intron 50.0%
GATGATCGGTACAATCGCGA+TGG - chr7_2:7382167-7382186 Msa1046740:intron 50.0%
GAGGAACGTTATGGTAGGGA+CGG - chr7_2:7382212-7382231 Msa1046740:intron 50.0%
GCTTGGCTAGGAAGATCACA+AGG - chr7_2:7382432-7382451 Msa1046740:intron 50.0%
GTAAGGATGAGGCTAGGATC+CGG + chr7_2:7382671-7382690 None:intergenic 50.0%
CAACTGGGCAGTACATCCTT+TGG + chr7_2:7382933-7382952 None:intergenic 50.0%
TCCTGTGGTTTACTCAAGGG+GGG + chr7_2:7383055-7383074 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_2:7383197-7383216 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_2:7383203-7383222 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_2:7383200-7383219 Msa1046740:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG - chr7_2:7383207-7383226 Msa1046740:intron 50.0%
AGAAGATCCAGTAGGAGCAG+AGG + chr7_2:7384200-7384219 None:intergenic 50.0%
GCAGCAGCAGTTACTTCAGT+TGG + chr7_2:7384238-7384257 None:intergenic 50.0%
! TCCTTTGGGGAGTTGGATCT+TGG - chr7_2:7384496-7384515 Msa1046740:CDS 50.0%
GGATCTTGGCACTTGGTTGT+TGG - chr7_2:7384510-7384529 Msa1046740:CDS 50.0%
TTAGAAGTGGTTGGAGCAGC+TGG + chr7_2:7384604-7384623 None:intergenic 50.0%
TCAACCCCTGAAGCAAACAC+TGG - chr7_2:7384709-7384728 Msa1046740:intron 50.0%
! TCTTTTGCAGCACCATCCTC+TGG - chr7_2:7384742-7384761 Msa1046740:intron 50.0%
! CTTTTGCAGCACCATCCTCT+GGG - chr7_2:7384743-7384762 Msa1046740:intron 50.0%
! TGAGGTGCATGGTGTTGAGA+TGG + chr7_2:7385220-7385239 None:intergenic 50.0%
! GTTCAGTAGTCTGAGGTGCA+TGG + chr7_2:7385231-7385250 None:intergenic 50.0%
TGGGATGGTTCAGTAGTCTG+AGG + chr7_2:7385238-7385257 None:intergenic 50.0%
! ATCTCAGGTAATGGTGCAGG+AGG + chr7_2:7385421-7385440 None:intergenic 50.0%
! GTCATCTCAGGTAATGGTGC+AGG + chr7_2:7385424-7385443 None:intergenic 50.0%
! GGTGAAGGTTGGCCAAAAGT+AGG + chr7_2:7385469-7385488 None:intergenic 50.0%
GCAGCTGAGAAACCTTGATG+AGG + chr7_2:7385544-7385563 None:intergenic 50.0%
GGCTGGGAAAATTGACCACT+TGG + chr7_2:7385592-7385611 None:intergenic 50.0%
! AGTGGTCAATTTTCCCAGCC+AGG - chr7_2:7385592-7385611 Msa1046740:intron 50.0%
AGAAGCTGAAAAGCCTGGCT+GGG + chr7_2:7385608-7385627 None:intergenic 50.0%
TAGAAGCTGAAAAGCCTGGC+TGG + chr7_2:7385609-7385628 None:intergenic 50.0%
AGGTTGCTGTGCATATGGAC+TGG + chr7_2:7385653-7385672 None:intergenic 50.0%
! CCAGGTTGACCAGAATGAGA+AGG + chr7_2:7385679-7385698 None:intergenic 50.0%
CCTTCTCATTCTGGTCAACC+TGG - chr7_2:7385676-7385695 Msa1046740:intron 50.0%
CCAGTAGATGACGAAAACCC+AGG + chr7_2:7385706-7385725 None:intergenic 50.0%
! CCTGGGTTTTCGTCATCTAC+TGG - chr7_2:7385703-7385722 Msa1046740:intron 50.0%
! CAGCCACCTTTTGCTTCTCA+AGG - chr7_2:7385736-7385755 Msa1046740:intron 50.0%
! CCACCTTTTGCTTCTCAAGG+CGG - chr7_2:7385739-7385758 Msa1046740:intron 50.0%
TGACCGCCTTGAGAAGCAAA+AGG + chr7_2:7385745-7385764 None:intergenic 50.0%
GCTTGGGGAGTCATTTGTGA+AGG + chr7_2:7385928-7385947 None:intergenic 50.0%
!! ATTTGTGCCGGTTGTGCTGT+TGG + chr7_2:7385952-7385971 None:intergenic 50.0%
GCAGTAGATCCTCCATGATG+GGG + chr7_2:7385985-7386004 None:intergenic 50.0%
ATTGGGAGCAGGCACTTGAT+GGG + chr7_2:7386100-7386119 None:intergenic 50.0%
!! GGTGCCGCTGAAATAGCATA+CGG + chr7_2:7386129-7386148 None:intergenic 50.0%
TGGGCAGACACATTAAGCAG+GGG - chr7_2:7386204-7386223 Msa1046740:intron 50.0%
AGACACATTAAGCAGGGGAC+TGG - chr7_2:7386209-7386228 Msa1046740:intron 50.0%
ATGGGATCAGGTTCAGGCAT+AGG - chr7_2:7386477-7386496 Msa1046740:intron 50.0%
! ATGGGTTCTGGTATGGGCAT+GGG - chr7_2:7386543-7386562 Msa1046740:intron 50.0%
TTCTGGTATGGGCATGGGTA+TGG - chr7_2:7386548-7386567 Msa1046740:intron 50.0%
TCTGGTATGGGCATGGGTAT+GGG - chr7_2:7386549-7386568 Msa1046740:intron 50.0%
TATGGGCATGGGTATGGGAA+TGG - chr7_2:7386554-7386573 Msa1046740:intron 50.0%
ATGGGCATGGGTATGGGAAT+GGG - chr7_2:7386555-7386574 Msa1046740:intron 50.0%
GGTATGGGTATGGGAGGTTA+CGG - chr7_2:7386591-7386610 Msa1046740:intron 50.0%
AGGCATGACATCCATGGGTA+TGG - chr7_2:7386617-7386636 Msa1046740:intron 50.0%
GGCATGACATCCATGGGTAT+GGG - chr7_2:7386618-7386637 Msa1046740:intron 50.0%
GACATCCATGGGTATGGGTA+TGG - chr7_2:7386623-7386642 Msa1046740:intron 50.0%
GGTATGGGTATGGGTGGTAT+GGG - chr7_2:7386633-7386652 Msa1046740:intron 50.0%
GTATGGGTATGGGTGGTATG+GGG - chr7_2:7386634-7386653 Msa1046740:intron 50.0%
TATGGGTATGGGTGGTATGG+GGG - chr7_2:7386635-7386654 Msa1046740:intron 50.0%
!! GAACCAGGAGGCATTCCATT+AGG + chr7_2:7386696-7386715 None:intergenic 50.0%
TTACCTGGCATGTTGGAACC+AGG + chr7_2:7386711-7386730 None:intergenic 50.0%
AATAACATGATGCGTCCCGG+TGG - chr7_2:7386738-7386757 Msa1046740:intron 50.0%
TGGCTGTTGAGCATAACCAC+CGG + chr7_2:7386757-7386776 None:intergenic 50.0%
! TGTGGACTACTAGTAGGCAC+TGG + chr7_2:7386884-7386903 None:intergenic 50.0%
TCAGCGTTGTGTACCAGTGA+CGG - chr7_2:7387049-7387068 Msa1046740:five_prime_UTR 50.0%
!! CAGTTTGGGCCTTTTGGTGC+TGG - chr7_2:7380454-7380473 Msa1046740:CDS 55.0%
AGTGTTCCATGAGGACCCCA+TGG + chr7_2:7380929-7380948 None:intergenic 55.0%
CCAGGTCTATACATGCCACC+TGG + chr7_2:7382029-7382048 None:intergenic 55.0%
CCAGGTGGCATGTATAGACC+TGG - chr7_2:7382026-7382045 Msa1046740:intron 55.0%
AGATCGTTATGCGAGCAGGG+AGG - chr7_2:7382091-7382110 Msa1046740:intron 55.0%
ACGATGGCCAACACTCGTCT+CGG - chr7_2:7382330-7382349 Msa1046740:CDS 55.0%
GGCTTTACCGAGACGAGTGT+TGG + chr7_2:7382340-7382359 None:intergenic 55.0%
! GTCTGCACTGCACCGAGTTT+TGG - chr7_2:7382469-7382488 Msa1046740:intron 55.0%
TTACCTCCGCCTCCACAGAT+AGG - chr7_2:7383029-7383048 Msa1046740:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_2:7383195-7383214 Msa1046740:intron 55.0%
TCGGCAGAATCTGCTCCAAG+AGG - chr7_2:7384139-7384158 Msa1046740:intron 55.0%
ATCCAGTAGGAGCAGAGGCT+AGG + chr7_2:7384195-7384214 None:intergenic 55.0%
GACCTGATGTAGGACCACGT+GGG + chr7_2:7384330-7384349 None:intergenic 55.0%
AGACCTGATGTAGGACCACG+TGG + chr7_2:7384331-7384350 None:intergenic 55.0%
GCCAAGATCCAACTCCCCAA+AGG + chr7_2:7384500-7384519 None:intergenic 55.0%
GGGAGTTGGATCTTGGCACT+TGG - chr7_2:7384503-7384522 Msa1046740:CDS 55.0%
CTGGGAGCAGATGCAGAGTA+TGG + chr7_2:7385322-7385341 None:intergenic 55.0%
CCACTTGGAAGGGTTTGTGC+AGG + chr7_2:7385577-7385596 None:intergenic 55.0%
CCTGCACAAACCCTTCCAAG+TGG - chr7_2:7385574-7385593 Msa1046740:intron 55.0%
CCGCCTTGAGAAGCAAAAGG+TGG + chr7_2:7385742-7385761 None:intergenic 55.0%
ACAAGCGGTCATACCTACGG+TGG - chr7_2:7385778-7385797 Msa1046740:intron 55.0%
! CAGGGAGTACAATCCACCGT+AGG + chr7_2:7385794-7385813 None:intergenic 55.0%
!! CTACGGTGGATTGTACTCCC+TGG - chr7_2:7385792-7385811 Msa1046740:intron 55.0%
AGTGGGACCTACTTGCCACA+GGG - chr7_2:7385886-7385905 Msa1046740:intron 55.0%
TGAGGATCCCTGTGGCAAGT+AGG + chr7_2:7385896-7385915 None:intergenic 55.0%
TTGCCACAGGGATCCTCAAC+AGG - chr7_2:7385898-7385917 Msa1046740:intron 55.0%
AAGCCTGTTGAGGATCCCTG+TGG + chr7_2:7385904-7385923 None:intergenic 55.0%
! GGTTGTGCTGTTGGAGCTTG+GGG + chr7_2:7385943-7385962 None:intergenic 55.0%
! CGGTTGTGCTGTTGGAGCTT+GGG + chr7_2:7385944-7385963 None:intergenic 55.0%
CCAAGCTCCAACAGCACAAC+CGG - chr7_2:7385942-7385961 Msa1046740:intron 55.0%
CATTGGGAGCAGGCACTTGA+TGG + chr7_2:7386101-7386120 None:intergenic 55.0%
!! TACGGTGAAGCATTGGGAGC+AGG + chr7_2:7386111-7386130 None:intergenic 55.0%
! GATGGGTTCTGGTATGGGCA+TGG - chr7_2:7386542-7386561 Msa1046740:intron 55.0%
ATGGGAATGGGCAATGCTCC+CGG - chr7_2:7386567-7386586 Msa1046740:intron 55.0%
ACCTCCCATACCCATACCAC+CGG + chr7_2:7386589-7386608 None:intergenic 55.0%
ATGGGTATGGGAGGTTACGG+AGG - chr7_2:7386594-7386613 Msa1046740:intron 55.0%
! GGAGGAGGCATGACATCCAT+GGG - chr7_2:7386612-7386631 Msa1046740:intron 55.0%
TCCATGGGTATGGGTATGGG+TGG - chr7_2:7386627-7386646 Msa1046740:intron 55.0%
ACCACCCATACCCATACCCA+TGG + chr7_2:7386631-7386650 None:intergenic 55.0%
GGGTATGGGTATGGGTGGTA+TGG - chr7_2:7386632-7386651 Msa1046740:intron 55.0%
ATGGGTATGGGTGGTATGGG+GGG - chr7_2:7386636-7386655 Msa1046740:intron 55.0%
!! CCAGGAGGCATTCCATTAGG+AGG + chr7_2:7386693-7386712 None:intergenic 55.0%
CCTCCTAATGGAATGCCTCC+TGG - chr7_2:7386690-7386709 Msa1046740:intron 55.0%
GGCTGTTGAGCATAACCACC+GGG + chr7_2:7386756-7386775 None:intergenic 55.0%
CAGCGTTGTGTACCAGTGAC+GGG - chr7_2:7387050-7387069 Msa1046740:five_prime_UTR 55.0%
CAGCACGAGCCAGCACCAAA+AGG + chr7_2:7380466-7380485 None:intergenic 60.0%
ACTCAAGGGGGGCCTATCTG+TGG + chr7_2:7383044-7383063 None:intergenic 60.0%
GCCCCCCTTGAGTAAACCAC+AGG - chr7_2:7383051-7383070 Msa1046740:intron 60.0%
TGGATGCCGACCCCACTTAG+TGG - chr7_2:7383188-7383207 Msa1046740:intron 60.0%
GGATGCCGACCCCACTTAGT+GGG - chr7_2:7383189-7383208 Msa1046740:intron 60.0%
CTCAGAGCCCTGTGCCTGAA+AGG - chr7_2:7384029-7384048 Msa1046740:intron 60.0%
GTAGGAGCAGAGGCTAGGCT+AGG + chr7_2:7384190-7384209 None:intergenic 60.0%
AGCCTAGCCTCTGCTCCTAC+TGG - chr7_2:7384190-7384209 Msa1046740:intron 60.0%
GACCCACGTGGTCCTACATC+AGG - chr7_2:7384325-7384344 Msa1046740:CDS 60.0%
!! CCTGATGTAGCGGGCACAAG+AGG + chr7_2:7384685-7384704 None:intergenic 60.0%
CCTCTTGTGCCCGCTACATC+AGG - chr7_2:7384682-7384701 Msa1046740:intron 60.0%
TCTGGTCAACCTGGCATGCC+TGG - chr7_2:7385685-7385704 Msa1046740:intron 60.0%
CTGGTCAACCTGGCATGCCT+GGG - chr7_2:7385686-7385705 Msa1046740:intron 60.0%
GACGAAAACCCAGGCATGCC+AGG + chr7_2:7385697-7385716 None:intergenic 60.0%
CAGTGGGACCTACTTGCCAC+AGG - chr7_2:7385885-7385904 Msa1046740:intron 60.0%
! CCGGTTGTGCTGTTGGAGCT+TGG + chr7_2:7385945-7385964 None:intergenic 60.0%
GGTTCAGGCATAGGTCGTGC+TGG - chr7_2:7386486-7386505 Msa1046740:intron 60.0%
GGCAATGCTCCCGGTGGTAT+GGG - chr7_2:7386576-7386595 Msa1046740:intron 60.0%
TGCTCCCGGTGGTATGGGTA+TGG - chr7_2:7386581-7386600 Msa1046740:intron 60.0%
GCTCCCGGTGGTATGGGTAT+GGG - chr7_2:7386582-7386601 Msa1046740:intron 60.0%
CCTCCCATACCCATACCACC+GGG + chr7_2:7386588-7386607 None:intergenic 60.0%
GGTATGGGAGGTTACGGAGG+AGG - chr7_2:7386597-7386616 Msa1046740:intron 60.0%
! CGGAGGAGGCATGACATCCA+TGG - chr7_2:7386611-7386630 Msa1046740:intron 60.0%
TGGGTATGGGTGGTATGGGG+GGG - chr7_2:7386637-7386656 Msa1046740:intron 60.0%
ATGGGTGGTATGGGGGGGAT+AGG - chr7_2:7386642-7386661 Msa1046740:intron 60.0%
TGGTATGGGGGGGATAGGCA+TGG - chr7_2:7386647-7386666 Msa1046740:intron 60.0%
GGTATGGGGGGGATAGGCAT+GGG - chr7_2:7386648-7386667 Msa1046740:intron 60.0%
GTATGGGGGGGATAGGCATG+GGG - chr7_2:7386649-7386668 Msa1046740:intron 60.0%
CCTGGCATGTTGGAACCAGG+AGG + chr7_2:7386708-7386727 None:intergenic 60.0%
CCTCCTGGTTCCAACATGCC+AGG - chr7_2:7386705-7386724 Msa1046740:intron 60.0%
CAAGGGGGGCCTATCTGTGG+AGG + chr7_2:7383041-7383060 None:intergenic 65.0%
GCATGAGGGGACGAGCCTCT+TGG + chr7_2:7384157-7384176 None:intergenic 65.0%
! GGCATAGGTCGTGCTGGTGC+TGG - chr7_2:7386492-7386511 Msa1046740:intron 65.0%
GGAATGGGCAATGCTCCCGG+TGG - chr7_2:7386570-7386589 Msa1046740:intron 65.0%
GGGCAATGCTCCCGGTGGTA+TGG - chr7_2:7386575-7386594 Msa1046740:intron 65.0%
CCCGGTGGTATGGGTATGGG+AGG - chr7_2:7386585-7386604 Msa1046740:intron 65.0%
GGGCCTATCTGTGGAGGCGG+AGG + chr7_2:7383035-7383054 None:intergenic 70.0%
GGGGGGCCTATCTGTGGAGG+CGG + chr7_2:7383038-7383057 None:intergenic 70.0%
GGGGGGATAGGCATGGGGCA+AGG - chr7_2:7386654-7386673 Msa1046740:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 7379399 7387176 7379399 ID=Msa1046740;Name=Msa1046740
chr7_2 mRNA 7379399 7387176 7379399 ID=Msa1046740-mRNA-1;Parent=Msa1046740;Name=Msa1046740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=259|1|1|1|0.92|0.85|14|382|960
chr7_2 exon 7379399 7380217 7379399 ID=Msa1046740-mRNA-1:exon:1789;Parent=Msa1046740-mRNA-1
chr7_2 exon 7380323 7381418 7380323 ID=Msa1046740-mRNA-1:exon:1788;Parent=Msa1046740-mRNA-1
chr7_2 exon 7381792 7381970 7381792 ID=Msa1046740-mRNA-1:exon:1787;Parent=Msa1046740-mRNA-1
chr7_2 exon 7382229 7382449 7382229 ID=Msa1046740-mRNA-1:exon:1786;Parent=Msa1046740-mRNA-1
chr7_2 exon 7382525 7382614 7382525 ID=Msa1046740-mRNA-1:exon:1785;Parent=Msa1046740-mRNA-1
chr7_2 exon 7382732 7382773 7382732 ID=Msa1046740-mRNA-1:exon:1784;Parent=Msa1046740-mRNA-1
chr7_2 exon 7384224 7384565 7384224 ID=Msa1046740-mRNA-1:exon:1783;Parent=Msa1046740-mRNA-1
chr7_2 exon 7384938 7385083 7384938 ID=Msa1046740-mRNA-1:exon:1782;Parent=Msa1046740-mRNA-1
chr7_2 exon 7385220 7385303 7385220 ID=Msa1046740-mRNA-1:exon:1781;Parent=Msa1046740-mRNA-1
chr7_2 exon 7385435 7385513 7385435 ID=Msa1046740-mRNA-1:exon:1780;Parent=Msa1046740-mRNA-1
chr7_2 exon 7385594 7385673 7385594 ID=Msa1046740-mRNA-1:exon:1779;Parent=Msa1046740-mRNA-1
chr7_2 exon 7385836 7385887 7385836 ID=Msa1046740-mRNA-1:exon:1778;Parent=Msa1046740-mRNA-1
chr7_2 exon 7386039 7386125 7386039 ID=Msa1046740-mRNA-1:exon:1777;Parent=Msa1046740-mRNA-1
chr7_2 exon 7386970 7387176 7386970 ID=Msa1046740-mRNA-1:exon:1776;Parent=Msa1046740-mRNA-1
chr7_2 five_prime_UTR 7386970 7387176 7386970 ID=Msa1046740-mRNA-1:five_prime_utr;Parent=Msa1046740-mRNA-1
chr7_2 five_prime_UTR 7386074 7386125 7386074 ID=Msa1046740-mRNA-1:five_prime_utr;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7386039 7386073 7386039 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7385836 7385887 7385836 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7385594 7385673 7385594 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7385435 7385513 7385435 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7385220 7385303 7385220 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7384938 7385083 7384938 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7384224 7384565 7384224 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7382732 7382773 7382732 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7382525 7382614 7382525 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7382229 7382449 7382229 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7381792 7381970 7381792 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7380323 7381418 7380323 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 CDS 7379781 7380217 7379781 ID=Msa1046740-mRNA-1:cds;Parent=Msa1046740-mRNA-1
chr7_2 three_prime_UTR 7379399 7379780 7379399 ID=Msa1046740-mRNA-1:three_prime_utr;Parent=Msa1046740-mRNA-1
Gene Sequence

>Msa1046740

ATGAAGAAGGTTTTTGGTCAAACTGTTAGGGACCTTAAAAGAGAAGTGAACAAGAAAGTGCTCAAAGTTCCTGGCATTGAACAGAAGGTTCTTGATGCTACTAGCAATGAACCATGGGGTCCTCATGGAACACTGCTTGCAGACATTGCTCAGGCAACTAGAAACCCTCATGAATACCAGATGATCATGTCAGTAGTCTGGAAACGAATTAACGACACTGGCAAGAATTGGCGGCATGTCTACAAGGCTTTGACAGTACTTGAGTACTTGGTGGCTCATGGTTCTGAGAGAGTCATAGATGAGATCAAAGAACATTCTTATCAAATATCGACTTTGTCCGACTTTCAATATATTGATTCCAGTGGAAGAGATCAAGGAAACAATGTCAGGAAAAAATCTCAGAATCTCGTTGTCCTTGTGAATGATAAAGAAAGAATCGTAGAGGTTAGGCAGAAGGCTGCTGTTAATAGGGAAAAGTTTCGCAATAACACACCAGGTGGCATGTATAGACCTGGTTCACACTCAAGCATTGGAAGCTATGGTGATCGATATGAAGAAGATCGTTATGCGAGCAGGGAGGAAGATAGAAATGGCTATGGTTATGGAAGAGAAAGAGAAATGGGCTCTAGAGATGATGATCGGTACAATCGCGATGGAGATCGTTATGGTAGAGATTATGAGGAACGTTATGGTAGGGACGGTTACAGAGATGATGATAGGGGAAGAAGTCGAAGTGTTGACTACAATTATGATGATACAAGGAGCAGGAATTCTGATAGAGATCGTGATTTCGATGACGATGGCCAACACTCGTCTCGAGGTAGCAATGCTAAAGTTGAAGACCAATCACTGGAAGCAAGACTTCAGCGGAAACTTTCTGAGCAAAATTCGGGTGCTCCTCCTAGTTATGAAGAGGCTGTTGGTGAAGCTCAGAGCCCTGTGCCTGAAAGGGATGTTGAAACTTCGGCAGAATCTGCTCCAAGAGGCTCGTCCCCTCATGCAAGTGATAATCCTAGCCTAGCCTCTGCTCCTACTGGATCTTCTCCTGTAAACAATAATCCAACTGAAGTAACTGCTGCTGCCAGTACATCTGTTGCTGCTAGTACTGCTGTTTCTACTCAGGAAACTGAGCCCACTGATGATTTCTTTGACCCACGTGGTCCTACATCAGCTGCTCCAACCACTTCTAATTTTGGCGAAATAGATTTGCTCGGTTCTTTATCAGACTCATTCTCTTCAAATGCTCTGCCTCTTGTGCCCGCTACATCAGGAATTTCAACCCCTGAAGCAAACACTGGTTCAACAGCTTCTTTTGCAGCACCATCCTCTGGGTCCAATAATTTCAATCAGTCTTTTGAAGATCCGTTTGGTGATTCACCATTCAAGGCTGATACTTCTGTTGAAACTGCTCCATCTCAACACCATGCACCTCAGACTACTGAACCATCCCAATCAGATGGTTTTAATGCCGACATGTCTAATTTTGGGTTTGGGGACTCATTTTCTATTGTACCATACTCTGCATCTGCTCCCAGTGACACTCAACCTTTCTCTGCTAACTCCCAGTTTTTGTCCCAAGATTCGGAAACTGATATTCTAGCTGACATTCTTCCTCCTGCACCATTACCTGAGATGACATCACAGCAGAACAGTTCAGCTCCTACTTTTGGCCAACCTTCACCTTCCTTTTCAACTTCATCTGGACCATTTTCTGAACCAACTGGTCAACTTACTCCTCATCAAGGTTTCTCAGCTGCAACCAATCAACCTGCACAAACCCTTCCAAGTGGTCAATTTTCCCAGCCAGGCTTTTCAGCTTCTAGTTCATCTTTTTCAGCATCTACCAGTCCATATGCACAGCAACCTTTTCCTTCTCATTCTGGTCAACCTGGCATGCCTGGGTTTTCGTCATCTACTGGCCATTCTATGCAGCCACCTTTTGCTTCTCAAGGCGGTCAATCTACTGCACAAACAAGCGGTCATACCTACGGTGGATTGTACTCCCTGGATACATCTCTTACTCCAGGAGCTCAAAACATGTATTCTCAATCACAAAATGGATATAATGGATCTATGAACAGTGGGACCTACTTGCCACAGGGATCCTCAACAGGCTTTCCTTCACAAATGACTCCCCAAGCTCCAACAGCACAACCGGCACAAATCACAAACTTTCCCCATCATGGAGGATCTACTGCTTCTCCCTCTCCAACTGATCAAGCATCACAGTTCAACAACCAGAGCTTCTTTGGACAACAAGGGAATGCAGCTCCCTTTAGCTCATCATATACCCATCAAGTGCCTGCTCCCAATGCTTCACCGTATGCTATTTCAGCGGCACCAAATTCTTTAGTTTCTCAACCATCCAAAGATAAGTTTGAAACAAAATCAACAGTTTGGGCAGACACATTAAGCAGGGGACTGGTTAATTTAAACATATCTGGACCTAAAACTAATCCGTTAGCAGATATTGGCATTGACTTCGAATCCATTAATAGGAAGGAAAAGAGAATGGAGAAGCCCACTAACACACCTGTAACATCAACTGTAAATATGGGTAAAGCTATGGGATCAGGTTCAGGCATAGGTCGTGCTGGTGCTGGTGCTCTTAGACCTAATCCAAATTCGATGATGGGTTCTGGTATGGGCATGGGTATGGGAATGGGCAATGCTCCCGGTGGTATGGGTATGGGAGGTTACGGAGGAGGCATGACATCCATGGGTATGGGTATGGGTGGTATGGGGGGGATAGGCATGGGGCAAGGATACCAGATGCAACCTCCTAATGGAATGCCTCCTGGTTCCAACATGCCAGGTAACTATAATAATAACATGATGCGTCCCGGTGGTTATGCTCAACAGCCATATGGTGGATACCGATGA
Protein sequence

>Msa1046740

MKKVFGQTVRDLKREVNKKVLKVPGIEQKVLDATSNEPWGPHGTLLADIAQATRNPHEYQMIMSVVWKRINDTGKNWRHVYKALTVLEYLVAHGSERVIDEIKEHSYQISTLSDFQYIDSSGRDQGNNVRKKSQNLVVLVNDKERIVEVRQKAAVNREKFRNNTPGGMYRPGSHSSIGSYGDRYEEDRYASREEDRNGYGYGREREMGSRDDDRYNRDGDRYGRDYEERYGRDGYRDDDRGRSRSVDYNYDDTRSRNSDRDRDFDDDGQHSSRGSNAKVEDQSLEARLQRKLSEQNSGAPPSYEEAVGEAQSPVPERDVETSAESAPRGSSPHASDNPSLASAPTGSSPVNNNPTEVTAAASTSVAASTAVSTQETEPTDDFFDPRGPTSAAPTTSNFGEIDLLGSLSDSFSSNALPLVPATSGISTPEANTGSTASFAAPSSGSNNFNQSFEDPFGDSPFKADTSVETAPSQHHAPQTTEPSQSDGFNADMSNFGFGDSFSIVPYSASAPSDTQPFSANSQFLSQDSETDILADILPPAPLPEMTSQQNSSAPTFGQPSPSFSTSSGPFSEPTGQLTPHQGFSAATNQPAQTLPSGQFSQPGFSASSSSFSASTSPYAQQPFPSHSGQPGMPGFSSSTGHSMQPPFASQGGQSTAQTSGHTYGGLYSLDTSLTPGAQNMYSQSQNGYNGSMNSGTYLPQGSSTGFPSQMTPQAPTAQPAQITNFPHHGGSTASPSPTDQASQFNNQSFFGQQGNAAPFSSSYTHQVPAPNASPYAISAAPNSLVSQPSKDKFETKSTVWADTLSRGLVNLNISGPKTNPLADIGIDFESINRKEKRMEKPTNTPVTSTVNMGKAMGSGSGIGRAGAGALRPNPNSMMGSGMGMGMGMGNAPGGMGMGGYGGGMTSMGMGMGGMGGIGMGQGYQMQPPNGMPPGSNMPGNYNNNMMRPGGYAQQPYGGYR*