AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1004110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004110 MtrunA17_Chr7g0214661 96.082 970 16 4 1 949 1 969 0.0 1864
Msa1004110 MtrunA17_Chr1g0151921 49.785 233 99 3 3 233 5 221 5.24e-69 239
Msa1004110 MtrunA17_Chr1g0151921 46.835 79 37 1 777 855 447 520 8.30e-13 72.0
Msa1004110 MtrunA17_Chr7g0214591 83.969 131 9 1 29 159 17 135 4.28e-67 221
Msa1004110 MtrunA17_Chr7g0214601 94.030 67 3 1 196 262 1 66 3.25e-32 119
Msa1004110 MtrunA17_Chr7g0214581 78.049 82 10 1 534 615 1 74 1.49e-30 117
Msa1004110 MtrunA17_Chr4g0031511 33.562 146 93 2 12 153 16 161 3.45e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004110 AT3G59290.1 45.612 1094 380 44 1 949 1 1024 0.0 672
Msa1004110 AT2G43160.3 48.640 919 291 35 1 864 1 793 0.0 635
Msa1004110 AT2G43160.2 48.640 919 291 35 1 864 1 793 0.0 635
Msa1004110 AT2G43160.5 48.640 919 291 35 1 864 1 793 0.0 635
Msa1004110 AT2G43160.1 48.640 919 291 35 1 864 1 793 0.0 635
Msa1004110 AT2G43160.4 53.858 648 195 23 1 591 1 601 3.04e-177 529
Msa1004110 AT5G11710.2 63.030 165 61 0 3 167 5 169 1.11e-68 239
Msa1004110 AT5G11710.1 63.030 165 61 0 3 167 5 169 1.11e-68 239
Msa1004110 AT5G11710.3 63.030 165 61 0 3 167 5 169 1.11e-68 239
Msa1004110 AT3G23350.2 33.846 130 83 1 27 153 36 165 4.78e-14 74.3
Msa1004110 AT3G23350.1 33.846 130 83 1 27 153 35 164 5.27e-14 73.9
Msa1004110 AT3G46540.1 37.736 106 65 1 32 136 52 157 1.22e-12 70.5
Msa1004110 AT3G46540.2 37.736 106 65 1 32 136 40 145 1.23e-12 70.1
Msa1004110 AT3G46540.3 37.736 106 65 1 32 136 4 109 1.23e-12 69.7

Find 321 sgRNAs with CRISPR-Local

Find 547 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCCGACATGTCTAATTT+TGG 0.120905 7_1:+1466236 Msa1004110:CDS
CCAGAACCCATCATCGAATT+TGG 0.156309 7_1:-1467496 None:intergenic
TGTAACATCAACTGTAAATA+TGG 0.164903 7_1:+1467411 Msa1004110:CDS
TATGAAAGTTCATACCTTTC+AGG 0.179618 7_1:-1465009 None:intergenic
TCATACCTGATTGAAATTAT+TGG 0.180358 7_1:-1465733 None:intergenic
GCTCCAACCACTTCTAATTT+TGG 0.186011 7_1:+1465573 Msa1004110:CDS
GTGCTTGAAAATATATCTTT+TGG 0.234185 7_1:+1461280 Msa1004110:five_prime_UTR
TTCAACAACCAGAGCTTCTT+TGG 0.235438 7_1:+1467001 Msa1004110:CDS
CAACCCTTTCCTTCTCATTC+TGG 0.236565 7_1:+1466632 Msa1004110:CDS
GTTGAACCAGTGTTTGCTTC+AGG 0.238458 7_1:-1465681 None:intergenic
TCTGGTCAACCTGGCATGCC+TGG 0.244292 7_1:+1466650 Msa1004110:CDS
GGTTGAGAAACTAAAGAATT+TGG 0.251924 7_1:-1467112 None:intergenic
TCAGTTGGATTATTGTTTAC+AGG 0.256532 7_1:-1465186 None:intergenic
TTTGGGGTCACCCTTCTTTA+GGG 0.259399 7_1:+1467980 Msa1004110:three_prime_UTR
GAATATCAGTTTCCGAATCT+TGG 0.282146 7_1:-1466346 None:intergenic
TTGAACATTATTCTCATAGA+TGG 0.285330 7_1:+1467767 Msa1004110:three_prime_UTR
AGATAGCAGTTTGGGCCTTT+TGG 0.285455 7_1:+1461388 Msa1004110:five_prime_UTR
TTGACTTCGAATCCATTAAT+AGG 0.289742 7_1:+1467353 Msa1004110:CDS
TTGAAACAAAATCAACAGTT+TGG 0.291455 7_1:+1467149 Msa1004110:CDS
CAATCACAAAATGGATATAA+TGG 0.300667 7_1:+1466818 Msa1004110:CDS
AACAGTTCAGCTCCTACTTT+TGG 0.301573 7_1:+1466419 Msa1004110:CDS
TGACCAGTTGGTTCAGAAAA+TGG 0.305050 7_1:-1466476 None:intergenic
GAAACTTTCTGAGCAAAATT+CGG 0.314709 7_1:+1464936 Msa1004110:CDS
TTCTGGTATGGGCATGGGTA+TGG 0.316001 7_1:+1467513 Msa1004110:CDS
CAAGCACCGTTCTCGATTGA+TGG 0.322288 7_1:-1461264 None:intergenic
CGGGATAGAATAACCTTACT+TGG 0.322909 7_1:+1468034 Msa1004110:three_prime_UTR
ATATTTACAGTTGATGTTAC+AGG 0.336067 7_1:-1467409 None:intergenic
CGGTTGTGCTGTTGGAGCTT+GGG 0.338820 7_1:-1466906 None:intergenic
ATGTATTCTCAATCACAAAA+TGG 0.341820 7_1:+1466809 Msa1004110:CDS
GGCAGAAGGCTGCTGTTAAT+AGG 0.348327 7_1:+1462543 Msa1004110:CDS
TATGGGTATGGGTGGTATGG+GGG 0.348395 7_1:+1467600 Msa1004110:CDS
GATAGAAATGGCTATGGTTA+TGG 0.348738 7_1:+1463050 Msa1004110:CDS
ACTAATCCGTTAGCAGATAT+TGG 0.353426 7_1:+1467328 Msa1004110:CDS
CTGGTTAATTTAAACATATC+TGG 0.356748 7_1:+1467193 Msa1004110:CDS
GGGTATGGGTATGGGTGGTA+TGG 0.366177 7_1:+1467597 Msa1004110:CDS
ATGGGTATGGGTGGTATGGG+GGG 0.366700 7_1:+1467601 Msa1004110:CDS
TTTACCTTGCTTCCAGTGAT+TGG 0.366779 7_1:-1464742 None:intergenic
CTTGTTGTCCAAAGAAGCTC+TGG 0.367203 7_1:-1467009 None:intergenic
AAGGGTTTGTGCAGGTTGAT+TGG 0.371447 7_1:-1466531 None:intergenic
AGCCTAACCTCTGCTCCTAC+TGG 0.373030 7_1:+1465156 Msa1004110:CDS
AGAGAAAGGTTGAGTGTCAC+TGG 0.375866 7_1:-1466303 None:intergenic
GGGCAATGCTCCCGGTGGTA+TGG 0.384752 7_1:+1467540 Msa1004110:CDS
CCAAGCTCCAACAGCACAAC+CGG 0.387453 7_1:+1466907 Msa1004110:CDS
TGCTCCCGGTGGTATGGGTA+TGG 0.390879 7_1:+1467546 Msa1004110:CDS
CCTTCTCATTCTGGTCAACC+TGG 0.393221 7_1:+1466641 Msa1004110:CDS
AAGAAAGTGCTCAAAGTTCC+TGG 0.395628 7_1:+1461644 Msa1004110:CDS
AAACTTTCTGAGCAAAATTC+GGG 0.395642 7_1:+1464937 Msa1004110:CDS
CCAAATTCGATGATGGGTTC+TGG 0.396774 7_1:+1467496 Msa1004110:CDS
GACATCCATGGGTATGGGTA+TGG 0.397976 7_1:+1467588 Msa1004110:CDS
CATTGGGAGCAGGCACTTGA+TGG 0.399820 7_1:-1467063 None:intergenic
TCTGGTATGGGCATGGGTAT+GGG 0.400275 7_1:+1467514 Msa1004110:CDS
TTCCATTAGGAGGTTGCATC+TGG 0.401445 7_1:-1467645 None:intergenic
GAACCAGGAGGCATTCCATT+AGG 0.401518 7_1:-1467658 None:intergenic
CCGGTTGTGCTGTTGGAGCT+TGG 0.402371 7_1:-1466907 None:intergenic
TTAACGACACTGGCAAGAAT+TGG 0.403604 7_1:+1462036 Msa1004110:CDS
GCAGAAGGCTGCTGTTAATA+GGG 0.404364 7_1:+1462544 Msa1004110:CDS
GGTATGGGTATGGGTGGTAT+GGG 0.405295 7_1:+1467598 Msa1004110:CDS
AAAGCTATGGGATCAGGTTC+AGG 0.405979 7_1:+1467436 Msa1004110:CDS
TTGAACCAGTGTTTGCTTCA+GGG 0.407111 7_1:-1465680 None:intergenic
TTCGATGATGGGTTCTGGTA+TGG 0.407415 7_1:+1467501 Msa1004110:CDS
CCCATCATCGAATTTGGATT+AGG 0.408567 7_1:-1467490 None:intergenic
AGAACATTCTTATCAAATAT+CGG 0.410125 7_1:+1462267 Msa1004110:CDS
AGTAGGCACTGGTATTGATA+TGG 0.415592 7_1:-1467835 None:intergenic
TGAAACAAAATCAACAGTTT+GGG 0.420070 7_1:+1467150 Msa1004110:CDS
TGTAAATATGGGTAAAGCTA+TGG 0.420888 7_1:+1467423 Msa1004110:CDS
GTATGGGTATGGGTGGTATG+GGG 0.421351 7_1:+1467599 Msa1004110:CDS
CCTCTTGTGCCCGCTACATC+AGG 0.422749 7_1:+1465648 Msa1004110:CDS
AATCTGAGCTTTAATTGAAT+CGG 0.422987 7_1:+1461329 Msa1004110:five_prime_UTR
TACCAGATGCAACCTCCTAA+TGG 0.425576 7_1:+1467643 Msa1004110:CDS
AATATCAGTTTCCGAATCTT+GGG 0.428028 7_1:-1466345 None:intergenic
TTGCCACAGGGATCCTCAAC+AGG 0.429401 7_1:+1466863 Msa1004110:CDS
CGGCATTAAAACCATCTGAT+TGG 0.430216 7_1:-1466220 None:intergenic
GAGATCAAGGAAACAATGTT+AGG 0.430825 7_1:+1462462 Msa1004110:CDS
CTGGAGTAAGAGATGTATCC+AGG 0.431098 7_1:-1466775 None:intergenic
GGAAAGGGTTGCTGTGCATA+TGG 0.432753 7_1:-1466620 None:intergenic
CCAATGCTTGAGTGTGAACC+AGG 0.432826 7_1:-1462978 None:intergenic
GGCATAGGTCGTGCTGGTGC+TGG 0.437369 7_1:+1467457 Msa1004110:CDS
ACCTAATCCAAATTCGATGA+TGG 0.437810 7_1:+1467489 Msa1004110:CDS
TAGAAGCTGAAAAGCCTGGC+TGG 0.438107 7_1:-1466571 None:intergenic
AGATGATCATGTCAGTAGTC+TGG 0.438186 7_1:+1462006 Msa1004110:CDS
GACGAGAACCCAGGCATGCC+AGG 0.440096 7_1:-1466659 None:intergenic
TGGGTATGGGTGGTATGGGG+GGG 0.442031 7_1:+1467602 Msa1004110:CDS
ACCTTCTTCATTGTAGCAGC+TGG 0.447293 7_1:-1461430 None:intergenic
AACTGTGATGCTTGATCAGT+TGG 0.447537 7_1:-1466980 None:intergenic
TTTGACAGTACTTGAGTACT+TGG 0.447802 7_1:+1462207 Msa1004110:CDS
CCTGGGTTCTCGTCATCTAC+TGG 0.447849 7_1:+1466668 Msa1004110:CDS
CTGGGAGCAGATGCAGAGTA+TGG 0.448787 7_1:-1466284 None:intergenic
AGGCATGACATCCATGGGTA+TGG 0.450485 7_1:+1467582 Msa1004110:CDS
GTTTCCTTGATCTCTTCCAC+TGG 0.451489 7_1:-1462453 None:intergenic
GTTTCAAACTTATCTTTGGA+TGG 0.452212 7_1:-1467133 None:intergenic
CTTGAGTACTTGGTGGCTCA+TGG 0.452669 7_1:+1462217 Msa1004110:CDS
AAGAAAGAATCGTAGAGGTT+AGG 0.456321 7_1:+1462522 Msa1004110:CDS
ATGGGAATGGGCAATGCTCC+CGG 0.457562 7_1:+1467532 Msa1004110:CDS
ATGGGCATGGGTATGGGAAT+GGG 0.459007 7_1:+1467520 Msa1004110:CDS
GTTTGGTGATTCACCATTCA+AGG 0.459359 7_1:+1466136 Msa1004110:CDS
ATGGGTTCTGGTATGGGCAT+GGG 0.460258 7_1:+1467508 Msa1004110:CDS
CACTCAAGCATTGGAAGCTA+TGG 0.466820 7_1:+1462987 Msa1004110:CDS
CCAACAGCCTCTTCATAACT+AGG 0.467604 7_1:-1464967 None:intergenic
GACAGTACTTGAGTACTTGG+TGG 0.468045 7_1:+1462210 Msa1004110:CDS
TGGTCCAGATGAAGTTGAAA+AGG 0.468346 7_1:-1466456 None:intergenic
TATGGGCATGGGTATGGGAA+TGG 0.468916 7_1:+1467519 Msa1004110:CDS
GCAGCAGCAGTTACTTCAGT+TGG 0.469123 7_1:-1465201 None:intergenic
CTGGTCAACCTGGCATGCCT+GGG 0.469496 7_1:+1466651 Msa1004110:CDS
AAGAAGATCGTTATGCGAGC+AGG 0.469595 7_1:+1463021 Msa1004110:CDS
GGCATTAAAACCATCTGATT+GGG 0.472191 7_1:-1466219 None:intergenic
ATGGGTAAAGCTATGGGATC+AGG 0.472433 7_1:+1467430 Msa1004110:CDS
GGCAATGCTCCCGGTGGTAT+GGG 0.473961 7_1:+1467541 Msa1004110:CDS
GATGGGTTCTGGTATGGGCA+TGG 0.474191 7_1:+1467507 Msa1004110:CDS
CGGTTACAGAGATGATGATA+GGG 0.474593 7_1:+1463166 Msa1004110:CDS
GTAACATCAACTGTAAATAT+GGG 0.478597 7_1:+1467412 Msa1004110:CDS
CAAAAGGTGGCTGCATAGAA+TGG 0.478813 7_1:-1466691 None:intergenic
GGCTGGGAAAATTGACCACT+TGG 0.479333 7_1:-1466554 None:intergenic
ATCACAAACTTTCCCCATCA+TGG 0.481463 7_1:+1466935 Msa1004110:CDS
TCGCCAAAATTAGAAGTGGT+TGG 0.482153 7_1:-1465576 None:intergenic
ATGGGTATATGATGAGCTAA+AGG 0.482711 7_1:-1467044 None:intergenic
GGGAAAATTGACCACTTGGA+AGG 0.482889 7_1:-1466550 None:intergenic
AGACTACTGACATGATCATC+TGG 0.483128 7_1:-1462004 None:intergenic
ACGGTTACAGAGATGATGAT+AGG 0.483970 7_1:+1463165 Msa1004110:CDS
GTAAATATGGGTAAAGCTAT+GGG 0.484647 7_1:+1467424 Msa1004110:CDS
ACATCCATGGGTATGGGTAT+GGG 0.486043 7_1:+1467589 Msa1004110:CDS
AGTTCATACCTTTCAGGCAC+AGG 0.488307 7_1:-1465003 None:intergenic
ATTTGTGCCGGTTGTGCTGT+TGG 0.488539 7_1:-1466914 None:intergenic
TCGTTATGGTAGAGATTATG+AGG 0.489581 7_1:+1463127 Msa1004110:CDS
TCTCATCGGTATCCACCATA+TGG 0.490499 7_1:-1467739 None:intergenic
ATTATAGTTACCTGGCATGT+TGG 0.492662 7_1:-1467680 None:intergenic
TTCTGCTGTGATGTCATCTC+AGG 0.493420 7_1:-1466398 None:intergenic
TTTACCTTCTGTTCAATGCC+AGG 0.495324 7_1:-1461662 None:intergenic
CCTCCTAATGGAATGCCTCC+TGG 0.495524 7_1:+1467655 Msa1004110:CDS
TGGGTCCAATAATTTCAATC+AGG 0.496058 7_1:+1465728 Msa1004110:CDS
TACGGTGAAGCATTGGGAGC+AGG 0.498349 7_1:-1467073 None:intergenic
TGCTCAAAGCACCCTAAAGA+AGG 0.498537 7_1:-1467991 None:intergenic
GATTCCAGTGGAAGAGATCA+AGG 0.499927 7_1:+1462449 Msa1004110:CDS
GACCCACGTGGTCCTACATC+AGG 0.501026 7_1:+1465291 Msa1004110:CDS
TCGATGATGGGTTCTGGTAT+GGG 0.502187 7_1:+1467502 Msa1004110:CDS
TATGGAAGAGAAAGAGAAAT+GGG 0.502207 7_1:+1463068 Msa1004110:CDS
ATGGGTATGGGAGGTTACGG+AGG 0.502622 7_1:+1467559 Msa1004110:CDS
CTCAGAGCCCTGTGCCTGAA+AGG 0.503032 7_1:+1464995 Msa1004110:CDS
AGTAAGCAATAACCCAAGTA+AGG 0.503609 7_1:-1468047 None:intergenic
GCATGAGGGGACGAGCCTCT+TGG 0.505127 7_1:-1465120 None:intergenic
GGTATGGGAGGTTACGGAGG+AGG 0.507832 7_1:+1467562 Msa1004110:CDS
ATAGCATACGGTGAAGCATT+GGG 0.508701 7_1:-1467079 None:intergenic
CTTCGAATCCATTAATAGGA+AGG 0.510293 7_1:+1467357 Msa1004110:CDS
CGGAGGAGGCATGACATCCA+TGG 0.510517 7_1:+1467576 Msa1004110:CDS
TGAACCAGTGTTTGCTTCAG+GGG 0.511259 7_1:-1465679 None:intergenic
GCTCCCGGTGGTATGGGTAT+GGG 0.511770 7_1:+1467547 Msa1004110:CDS
CCACTTGGAAGGGTTTGTGC+AGG 0.512945 7_1:-1466539 None:intergenic
CTGTGCATATGGACTGGTAG+AGG 0.513809 7_1:-1466609 None:intergenic
TAATAGGAAGGAAAAGAGAA+TGG 0.513835 7_1:+1467369 Msa1004110:CDS
CAGAGCTTCTTTGGACAACA+AGG 0.516128 7_1:+1467010 Msa1004110:CDS
TTATGGAAGAGAAAGAGAAA+TGG 0.516264 7_1:+1463067 Msa1004110:CDS
GGTTATGCTCAACAGCCATA+TGG 0.517930 7_1:+1467724 Msa1004110:CDS
TGCTACTAGCAATGAACCAT+GGG 0.518050 7_1:+1461850 Msa1004110:CDS
AACTGGGAGTTAGCAGAGAA+AGG 0.518088 7_1:-1466317 None:intergenic
GGAAAATTGACCACTTGGAA+GGG 0.518359 7_1:-1466549 None:intergenic
GTCATCTCAGGTAATGGTGC+AGG 0.518666 7_1:-1466386 None:intergenic
TGATGTTACAGGTGTGTTAG+TGG 0.518674 7_1:-1467398 None:intergenic
AATCGCGATGGAGATCGTTA+TGG 0.526840 7_1:+1463113 Msa1004110:CDS
GATGTTACAGGTGTGTTAGT+GGG 0.528282 7_1:-1467397 None:intergenic
TAGTAGTCAACATCAACATT+CGG 0.530020 7_1:+1467857 Msa1004110:three_prime_UTR
GGCTTTACCGAGACGAGTGT+TGG 0.530398 7_1:-1463271 None:intergenic
ACTAGCAGCAACAGATGTAC+TGG 0.530914 7_1:-1465223 None:intergenic
ATGTTATTATTATAGTTACC+TGG 0.532550 7_1:-1467688 None:intergenic
AAGCAGTAGATCCTCCATGA+TGG 0.533157 7_1:-1466949 None:intergenic
ATCCAGTAGGAGCAGAGGTT+AGG 0.535619 7_1:-1465158 None:intergenic
CCTGGTTCACACTCAAGCAT+TGG 0.537566 7_1:+1462978 Msa1004110:CDS
ACCTCCCATACCCATACCAC+CGG 0.537775 7_1:-1467551 None:intergenic
CAGCACGAGCCAGCACCAAA+AGG 0.538632 7_1:-1461403 None:intergenic
CAGCGTTGTGTACCAGTGAC+GGG 0.539082 7_1:+1468015 Msa1004110:three_prime_UTR
AATAGCATACGGTGAAGCAT+TGG 0.539962 7_1:-1467080 None:intergenic
GGTCAACTTACTCCTCATCA+AGG 0.540194 7_1:+1466494 Msa1004110:CDS
AGGTTATTCTATCCCGTCAC+TGG 0.540940 7_1:-1468027 None:intergenic
TGTTGATGTTGACTACTAGT+AGG 0.541373 7_1:-1467852 None:intergenic
AGCAGTAGATCCTCCATGAT+GGG 0.542007 7_1:-1466948 None:intergenic
AGTTCCTGGCATTGAACAGA+AGG 0.542788 7_1:+1461658 Msa1004110:CDS
ACAGAAGTATCAGCCTTGAA+TGG 0.544782 7_1:-1466149 None:intergenic
GGTATGGGTATGGGAGGTTA+CGG 0.544805 7_1:+1467556 Msa1004110:CDS
TGTGATGTCATCTCAGGTAA+TGG 0.544951 7_1:-1466392 None:intergenic
CCTCCTGGTTCCAACATGCC+AGG 0.545416 7_1:+1467670 Msa1004110:CDS
TGGGTATATGATGAGCTAAA+GGG 0.547010 7_1:-1467043 None:intergenic
GTTGAAATTCCTGATGTAGC+GGG 0.547079 7_1:-1465657 None:intergenic
TTGCAGGGATGTTGAAACTT+CGG 0.547701 7_1:+1465086 Msa1004110:intron
CCTAATCCAAATTCGATGAT+GGG 0.547928 7_1:+1467490 Msa1004110:CDS
TATAATGGATCTATGAACAG+TGG 0.548968 7_1:+1466833 Msa1004110:CDS
AGCAGGGAGGAAGATAGAAA+TGG 0.551877 7_1:+1463038 Msa1004110:CDS
AATGAACCATGGGGTCCTCA+TGG 0.552520 7_1:+1461860 Msa1004110:CDS
TTGACCAGAATGAGAAGGAA+AGG 0.552922 7_1:-1466636 None:intergenic
ATGGGATCAGGTTCAGGCAT+AGG 0.554092 7_1:+1467442 Msa1004110:CDS
TGACCGCCTTGAGAAGCAAA+AGG 0.554824 7_1:-1466707 None:intergenic
AGAGATTATGAGGAACGTTA+CGG 0.556905 7_1:+1463137 Msa1004110:CDS
CATTATTCTCATAGATGGAA+AGG 0.557104 7_1:+1467772 Msa1004110:three_prime_UTR
GAACTAGAAGCTGAAAAGCC+TGG 0.557523 7_1:-1466575 None:intergenic
AATAATAACATGATGCGTCC+CGG 0.558590 7_1:+1467700 Msa1004110:CDS
CTGGATACATCTCTTACTCC+AGG 0.559189 7_1:+1466776 Msa1004110:CDS
AAATTATTGGACCCAGAGGA+TGG 0.560427 7_1:-1465720 None:intergenic
CTACGGTGGATTGTACTCCC+TGG 0.560818 7_1:+1466757 Msa1004110:CDS
ACTGCTTGCAGACATTGCTC+AGG 0.560991 7_1:+1461886 Msa1004110:CDS
AGAAGCTGAAAAGCCTGGCT+GGG 0.561812 7_1:-1466570 None:intergenic
TTACCTGGCATGTTGGAACC+AGG 0.564606 7_1:-1467673 None:intergenic
TGAGGAGTAAGTTGACCAGT+TGG 0.567121 7_1:-1466488 None:intergenic
TTTGGCGAAATAGATTTGCT+CGG 0.568793 7_1:+1465591 Msa1004110:CDS
GGTTGTGCTGTTGGAGCTTG+GGG 0.568869 7_1:-1466905 None:intergenic
TTTGGGCAGACACATTAAGC+AGG 0.569763 7_1:+1467167 Msa1004110:CDS
CAGTGGGAACTACTTGCCAC+AGG 0.570242 7_1:+1466850 Msa1004110:CDS
ACCAGCTGCTACAATGAAGA+AGG 0.570837 7_1:+1461429 Msa1004110:exon
ACGACACTGGCAAGAATTGG+CGG 0.572387 7_1:+1462039 Msa1004110:CDS
AATGTTCAATTCAATCTCAT+CGG 0.572591 7_1:-1467753 None:intergenic
TTTCAATATATTGATTCCAG+TGG 0.573797 7_1:+1462437 Msa1004110:CDS
GAATTGGCGGCATGTCTACA+AGG 0.575568 7_1:+1462052 Msa1004110:CDS
CCTGATGTAGCGGGCACAAG+AGG 0.575962 7_1:-1465648 None:intergenic
GGTTCAGGCATAGGTCGTGC+TGG 0.577633 7_1:+1467451 Msa1004110:CDS
TTCTTTCTTTATCATTCACA+AGG 0.578691 7_1:-1462508 None:intergenic
AATCGTAGAGGTTAGGCAGA+AGG 0.578716 7_1:+1462529 Msa1004110:CDS
AAGACCAATCACTGGAAGCA+AGG 0.579896 7_1:+1464738 Msa1004110:CDS
TAGTACTGCTGTTTCTACTC+AGG 0.580365 7_1:+1465242 Msa1004110:CDS
TCAGCGTTGTGTACCAGTGA+CGG 0.580518 7_1:+1468014 Msa1004110:three_prime_UTR
AGGATTATCACTTGCATGAG+GGG 0.581255 7_1:-1465133 None:intergenic
GGCATGACATCCATGGGTAT+GGG 0.582541 7_1:+1467583 Msa1004110:CDS
GAAGTTGAAAAGGAAGGTGA+AGG 0.582558 7_1:-1466446 None:intergenic
TATTTCGCCAAAATTAGAAG+TGG 0.583832 7_1:-1465580 None:intergenic
TGAGGTGCATGGTGTTGAGA+TGG 0.584126 7_1:-1466182 None:intergenic
TGCTCCTCCTAGTTATGAAG+AGG 0.584725 7_1:+1464960 Msa1004110:CDS
CCAGGAGGCATTCCATTAGG+AGG 0.584810 7_1:-1467655 None:intergenic
GGAAAGTTTGTGATTTGTGC+CGG 0.585741 7_1:-1466926 None:intergenic
GGTGAAGGTTGGCCAAAAGT+AGG 0.586008 7_1:-1466431 None:intergenic
ATTATGATGATACAAGGAGC+AGG 0.587423 7_1:+1463213 Msa1004110:CDS
TGACCAGAATGAGAAGGAAA+GGG 0.588561 7_1:-1466635 None:intergenic
CCTAGTTATGAAGAGGCTGT+TGG 0.589371 7_1:+1464967 Msa1004110:CDS
ATTGGGAGCAGGCACTTGAT+GGG 0.590677 7_1:-1467062 None:intergenic
ATCTCAGGTAATGGTGCAGG+AGG 0.590753 7_1:-1466383 None:intergenic
TTGAATGGTGAATCACCAAA+CGG 0.591233 7_1:-1466134 None:intergenic
AGAAGATCCAGTAGGAGCAG+AGG 0.591613 7_1:-1465163 None:intergenic
TAAAGTTGAAGACCAATCAC+TGG 0.591701 7_1:+1464730 Msa1004110:CDS
GGAATCAATATATTGAAAGT+CGG 0.592291 7_1:-1462432 None:intergenic
TTGTGAAGGAAAGCCTGTTG+AGG 0.592434 7_1:-1466876 None:intergenic
GAGGAAGATAGAAATGGCTA+TGG 0.592967 7_1:+1463044 Msa1004110:CDS
AGACACATTAAGCAGGGGAC+TGG 0.593975 7_1:+1467174 Msa1004110:CDS
GCTTGGGGAGTCATTTGTGA+AGG 0.593976 7_1:-1466890 None:intergenic
ACGATGGCCAACACTCGTCT+CGG 0.595349 7_1:+1463264 Msa1004110:CDS
ACCACCCATACCCATACCCA+TGG 0.596082 7_1:-1467593 None:intergenic
GTAGGAGCAGAGGTTAGGCT+AGG 0.598670 7_1:-1465153 None:intergenic
GAATAAACATACACCACACT+AGG 0.598796 7_1:-1467926 None:intergenic
AGAAGATCGTTATGCGAGCA+GGG 0.603296 7_1:+1463022 Msa1004110:CDS
TAGGATTATCACTTGCATGA+GGG 0.604332 7_1:-1465134 None:intergenic
GAGAAAGGTTGAGTGTCACT+GGG 0.605764 7_1:-1466302 None:intergenic
GTTCAGTAGTCTGAGGTGCA+TGG 0.605954 7_1:-1466193 None:intergenic
ATAATGGATCTATGAACAGT+GGG 0.606177 7_1:+1466834 Msa1004110:CDS
TTGGGCAGACACATTAAGCA+GGG 0.606341 7_1:+1467168 Msa1004110:CDS
GTTCATACCTTTCAGGCACA+GGG 0.607284 7_1:-1465002 None:intergenic
GGGATAGAATAACCTTACTT+GGG 0.607500 7_1:+1468035 Msa1004110:three_prime_UTR
ATGCTACTAGCAATGAACCA+TGG 0.607785 7_1:+1461849 Msa1004110:CDS
TTGAAAAGGAAGGTGAAGGT+TGG 0.609242 7_1:-1466442 None:intergenic
GGAGGAGGCATGACATCCAT+GGG 0.610347 7_1:+1467577 Msa1004110:CDS
CAACTTTACAGACCTGATGT+AGG 0.610482 7_1:-1465303 None:intergenic
GATGATCGGTACAATCGCGA+TGG 0.615288 7_1:+1463101 Msa1004110:CDS
TAATATATCAAACCACCTGT+TGG 0.617109 7_1:-1468097 None:intergenic
TGGCTGTTGAGCATAACCAC+CGG 0.617470 7_1:-1467719 None:intergenic
TCAACCCCTGAAGCAAACAC+TGG 0.617887 7_1:+1465675 Msa1004110:CDS
CCAGTAGATGACGAGAACCC+AGG 0.618209 7_1:-1466668 None:intergenic
GCTCAAAGCACCCTAAAGAA+GGG 0.618694 7_1:-1467990 None:intergenic
TCAATGCCAATATCTGCTAA+CGG 0.618831 7_1:-1467334 None:intergenic
CTAGGATTATCACTTGCATG+AGG 0.619253 7_1:-1465135 None:intergenic
TTAAAACCATCTGATTGGGA+TGG 0.619276 7_1:-1466215 None:intergenic
GGTTGAAATTCCTGATGTAG+CGG 0.624098 7_1:-1465658 None:intergenic
AAACCCAAAATTAGACATGT+CGG 0.624530 7_1:-1466240 None:intergenic
ATTATGAGGAACGTTACGGT+AGG 0.625033 7_1:+1463141 Msa1004110:CDS
CCAGGTTGACCAGAATGAGA+AGG 0.625884 7_1:-1466641 None:intergenic
TTCTGTAAAGTGACCTAGTG+TGG 0.625999 7_1:+1467913 Msa1004110:three_prime_UTR
CCAGATGAAGTTGAAAAGGA+AGG 0.626716 7_1:-1466452 None:intergenic
TATGCTCAACAGCCATATGG+TGG 0.626869 7_1:+1467727 Msa1004110:CDS
ACTGAACCATCCCAATCAGA+TGG 0.626946 7_1:+1466209 Msa1004110:CDS
CAAACAAGCGGTCATACCTA+CGG 0.628165 7_1:+1466740 Msa1004110:CDS
TGTTGACTACTAGTAGGCAC+TGG 0.629763 7_1:-1467846 None:intergenic
AGTGTTCCATGAGGACCCCA+TGG 0.630276 7_1:-1461866 None:intergenic
ACTACAATTATGATGATACA+AGG 0.633869 7_1:+1463207 Msa1004110:CDS
CCCGGTGGTATGGGTATGGG+AGG 0.634885 7_1:+1467550 Msa1004110:CDS
TCCATGGGTATGGGTATGGG+TGG 0.636046 7_1:+1467592 Msa1004110:CDS
GGGTCAAAGAAATCATCAGT+GGG 0.636273 7_1:-1465273 None:intergenic
GGCTGTTGAGCATAACCACC+GGG 0.636968 7_1:-1467718 None:intergenic
GAGGAACGTTACGGTAGGGA+CGG 0.637581 7_1:+1463146 Msa1004110:CDS
GGTGCCGCTGAAATAGCATA+CGG 0.637836 7_1:-1467091 None:intergenic
TGGAGTAAGAGATGTATCCA+GGG 0.638728 7_1:-1466774 None:intergenic
TTTACAGGAGAAGATCCAGT+AGG 0.641156 7_1:-1465171 None:intergenic
TGGGCTCTAGAGATGATGAT+CGG 0.644727 7_1:+1463087 Msa1004110:CDS
TGGAAACGAATTAACGACAC+TGG 0.645325 7_1:+1462026 Msa1004110:CDS
AGCTAACCATCAATCGAGAA+CGG 0.647038 7_1:+1461258 Msa1004110:five_prime_UTR
TGGGTCAAAGAAATCATCAG+TGG 0.653510 7_1:-1465274 None:intergenic
TTATGAGGAACGTTACGGTA+GGG 0.653674 7_1:+1463142 Msa1004110:CDS
TACAAACGAGCAGACTTCAG+CGG 0.653752 7_1:+1464914 Msa1004110:intron
GGGTTGCTGTGCATATGGAC+TGG 0.655391 7_1:-1466615 None:intergenic
AGACCTGATGTAGGACCACG+TGG 0.656943 7_1:-1465294 None:intergenic
TGATAAAGAAAGAATCGTAG+AGG 0.663345 7_1:+1462517 Msa1004110:CDS
TCGGCAGAATCTGCTCCAAG+AGG 0.664433 7_1:+1465105 Msa1004110:CDS
CAATCTACTGCACAAACAAG+CGG 0.666091 7_1:+1466728 Msa1004110:CDS
CCTCCCATACCCATACCACC+GGG 0.667619 7_1:-1467550 None:intergenic
GCAGTAGATCCTCCATGATG+GGG 0.668568 7_1:-1466947 None:intergenic
AGAGCTTCTTTGGACAACAA+GGG 0.670278 7_1:+1467011 Msa1004110:CDS
ATTGAAATTATTGGACCCAG+AGG 0.671697 7_1:-1465724 None:intergenic
AGTGGGAACTACTTGCCACA+GGG 0.674040 7_1:+1466851 Msa1004110:CDS
GCAGCTGAGAAACCTTGATG+AGG 0.675499 7_1:-1466506 None:intergenic
CCGCCTTGAGAAGCAAAAGG+TGG 0.677466 7_1:-1466704 None:intergenic
TGATGCTTGATCAGTTGGAG+AGG 0.677645 7_1:-1466975 None:intergenic
GGTTACAGAGATGATGATAG+GGG 0.678995 7_1:+1463167 Msa1004110:CDS
TGGGCAGACACATTAAGCAG+GGG 0.681536 7_1:+1467169 Msa1004110:CDS
ACAGCCTCTTCATAACTAGG+AGG 0.683929 7_1:-1464964 None:intergenic
GATGATTTCTTTGACCCACG+TGG 0.686453 7_1:+1465279 Msa1004110:CDS
TGGGATGGTTCAGTAGTCTG+AGG 0.687217 7_1:-1466200 None:intergenic
TTCACCGTATGCTATTTCAG+CGG 0.691527 7_1:+1467087 Msa1004110:CDS
CCTGCACAAACCCTTCCAAG+TGG 0.692553 7_1:+1466539 Msa1004110:CDS
ACAAGCGGTCATACCTACGG+TGG 0.694635 7_1:+1466743 Msa1004110:CDS
CCTGGCATGTTGGAACCAGG+AGG 0.695127 7_1:-1467670 None:intergenic
GATCGTGATTTCGATGACGA+TGG 0.695675 7_1:+1463248 Msa1004110:CDS
CAGGGAGTACAATCCACCGT+AGG 0.701137 7_1:-1466756 None:intergenic
GATGCTTGATCAGTTGGAGA+GGG 0.703924 7_1:-1466974 None:intergenic
GGAATGGGCAATGCTCCCGG+TGG 0.716650 7_1:+1467535 Msa1004110:CDS
AATAACATGATGCGTCCCGG+TGG 0.724789 7_1:+1467703 Msa1004110:CDS
ACAAACTTTCCCCATCATGG+AGG 0.725140 7_1:+1466938 Msa1004110:CDS
TCTGCAAGCAGTGTTCCATG+AGG 0.732421 7_1:-1461875 None:intergenic
AGATCGTTATGCGAGCAGGG+AGG 0.744423 7_1:+1463025 Msa1004110:CDS
AAGCCTGTTGAGGATCCCTG+TGG 0.751881 7_1:-1466866 None:intergenic
GCTACTAGCAATGAACCATG+GGG 0.772068 7_1:+1461851 Msa1004110:CDS
GACCTGATGTAGGACCACGT+GGG 0.783038 7_1:-1465293 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTTGTAAAATA+AGG - chr7_1:1461792-1461811 None:intergenic 10.0%
!!! ATAAATCTAAAATGATTTAA+AGG + chr7_1:1462721-1462740 Msa1004110:intron 10.0%
!!! TTTTATTTTTGTAAAAAAGT+TGG - chr7_1:1463669-1463688 None:intergenic 10.0%
!! TATTAAATTTATTGACAAAT+TGG + chr7_1:1464013-1464032 Msa1004110:intron 10.0%
!!! TTTACTAATTTATCGTTTTA+TGG + chr7_1:1461508-1461527 Msa1004110:intron 15.0%
!!! TTACTAATTTATCGTTTTAT+GGG + chr7_1:1461509-1461528 Msa1004110:intron 15.0%
!! GGTTATAATACATAAAATTA+AGG - chr7_1:1461771-1461790 None:intergenic 15.0%
!!! GGTTACATTATAATATTTTA+CGG - chr7_1:1462376-1462395 None:intergenic 15.0%
!!! CATTTTAAAAAATCATCTTT+CGG - chr7_1:1463345-1463364 None:intergenic 15.0%
!! TATTCATAATTGGATTAAAA+TGG + chr7_1:1463758-1463777 Msa1004110:intron 15.0%
!!! AGAAATTTATTCTTATGTTT+TGG + chr7_1:1463792-1463811 Msa1004110:intron 15.0%
!!! TACATTGAAGTATTTATTAA+TGG + chr7_1:1464084-1464103 Msa1004110:intron 15.0%
!! AAATACATGCAAATTAATTA+GGG + chr7_1:1464169-1464188 Msa1004110:intron 15.0%
!! ATATTATATTGTATTTCCTT+TGG + chr7_1:1465447-1465466 Msa1004110:intron 15.0%
!! TATTATATTGTATTTCCTTT+GGG + chr7_1:1465448-1465467 Msa1004110:intron 15.0%
!!! ATTGGTTTTCAATTTTAAAA+AGG + chr7_1:1465997-1466016 Msa1004110:intron 15.0%
!!! TTAATGTATAGTTGCTATTT+TGG + chr7_1:1461538-1461557 Msa1004110:intron 20.0%
!!! TAATGTATAGTTGCTATTTT+GGG + chr7_1:1461539-1461558 Msa1004110:intron 20.0%
!! TTTGAACAGAAGATAATAAT+TGG + chr7_1:1461696-1461715 Msa1004110:intron 20.0%
!! AATATGATCACATGATAATA+TGG - chr7_1:1461747-1461766 None:intergenic 20.0%
!! AGAACATTCTTATCAAATAT+CGG + chr7_1:1462267-1462286 Msa1004110:CDS 20.0%
!! ACTAACAGCATATAAATATT+AGG - chr7_1:1462317-1462336 None:intergenic 20.0%
!!! AGGAATATTACATTTTTATC+AGG - chr7_1:1462397-1462416 None:intergenic 20.0%
!!! TGATTTTAGATTGAGTATAA+TGG - chr7_1:1462889-1462908 None:intergenic 20.0%
!!! ATTTTCTTAAACAATTTTCC+AGG + chr7_1:1462922-1462941 Msa1004110:intron 20.0%
!!! ATTTATCAGAGTTGATATAT+AGG - chr7_1:1463295-1463314 None:intergenic 20.0%
!!! AGATGATTTTTTAAAATGCT+TGG + chr7_1:1463347-1463366 Msa1004110:intron 20.0%
!!! TTTTTTTCTTCTTTCTGAAT+TGG + chr7_1:1463428-1463447 Msa1004110:intron 20.0%
!! TTAAGCAATAACATAAAGTA+AGG - chr7_1:1463617-1463636 None:intergenic 20.0%
!! CTTTGATCTTTATTCATAAT+TGG + chr7_1:1463748-1463767 Msa1004110:intron 20.0%
!!! TCTTTATTGATTATTAGAGT+TGG - chr7_1:1463885-1463904 None:intergenic 20.0%
!! GAAATACATGCAAATTAATT+AGG + chr7_1:1464168-1464187 Msa1004110:intron 20.0%
!! TCAAAAAGGATCTTATAAAA+AGG + chr7_1:1464229-1464248 Msa1004110:intron 20.0%
!! GCATAATAATTTCTTAAACA+GGG - chr7_1:1465381-1465400 None:intergenic 20.0%
!! ATTATATTGTATTTCCTTTG+GGG + chr7_1:1465449-1465468 Msa1004110:intron 20.0%
!! AAATGAATTTGTAAATGACT+TGG + chr7_1:1465812-1465831 Msa1004110:intron 20.0%
!!! TTTTGTTTCAAACTTATCTT+TGG - chr7_1:1467140-1467159 None:intergenic 20.0%
!! ATGTTATTATTATAGTTACC+TGG - chr7_1:1467691-1467710 None:intergenic 20.0%
!!! ACTACAATTCTTTTCTTTTT+TGG + chr7_1:1467962-1467981 Msa1004110:three_prime_UTR 20.0%
!!! CTACAATTCTTTTCTTTTTT+GGG + chr7_1:1467963-1467982 Msa1004110:three_prime_UTR 20.0%
!!! TACAATTCTTTTCTTTTTTG+GGG + chr7_1:1467964-1467983 Msa1004110:three_prime_UTR 20.0%
!! GTGCTTGAAAATATATCTTT+TGG + chr7_1:1461280-1461299 Msa1004110:five_prime_UTR 25.0%
!! AATCTGAGCTTTAATTGAAT+CGG + chr7_1:1461329-1461348 Msa1004110:five_prime_UTR 25.0%
!!! TTATTTTGTAGATAGCAGTT+TGG + chr7_1:1461379-1461398 Msa1004110:five_prime_UTR 25.0%
!! TATTTTGTAGATAGCAGTTT+GGG + chr7_1:1461380-1461399 Msa1004110:five_prime_UTR 25.0%
! AAGATAATAATTGGTGTGTA+AGG + chr7_1:1461705-1461724 Msa1004110:intron 25.0%
! AATTTAGATGTCAAAGCTTA+CGG - chr7_1:1461923-1461942 None:intergenic 25.0%
!! ATGTCTACAAGGTATTAATT+CGG + chr7_1:1462063-1462082 Msa1004110:intron 25.0%
! GGAATCAATATATTGAAAGT+CGG - chr7_1:1462435-1462454 None:intergenic 25.0%
!!! TTTCAATATATTGATTCCAG+TGG + chr7_1:1462437-1462456 Msa1004110:CDS 25.0%
! TTCTTTCTTTATCATTCACA+AGG - chr7_1:1462511-1462530 None:intergenic 25.0%
!! TTCTAGTTATATAAAGCATC+AGG + chr7_1:1462618-1462637 Msa1004110:intron 25.0%
! ATTATGGATTTACCAAAACT+GGG - chr7_1:1462679-1462698 None:intergenic 25.0%
!! GCAAAATAAAGGATTTTCAT+TGG - chr7_1:1462777-1462796 None:intergenic 25.0%
! ACTACAATTATGATGATACA+AGG + chr7_1:1463207-1463226 Msa1004110:CDS 25.0%
!! AAATCATCTTTCGGATTTTA+TGG - chr7_1:1463336-1463355 None:intergenic 25.0%
!!! ATTTTTTAAAATGCTTGGCT+AGG + chr7_1:1463352-1463371 Msa1004110:intron 25.0%
! ATGTCTACATAAATACTCAA+GGG - chr7_1:1463498-1463517 None:intergenic 25.0%
! AATAACATAAAGTAAGGATG+AGG - chr7_1:1463611-1463630 None:intergenic 25.0%
! AATTTCAAACTGAAAATGCT+TGG - chr7_1:1463699-1463718 None:intergenic 25.0%
! TATAGCACCTATATCATATA+TGG + chr7_1:1463725-1463744 Msa1004110:intron 25.0%
! ATCAAAGCCATATATGATAT+AGG - chr7_1:1463735-1463754 None:intergenic 25.0%
! ATGCAGTTGAAAATTCAAAA+AGG + chr7_1:1464215-1464234 Msa1004110:intron 25.0%
!! TACAACATAAATGGTATTGA+GGG + chr7_1:1464345-1464364 Msa1004110:intron 25.0%
!!! TAACAACTCGTTTTTTTACA+CGG - chr7_1:1464443-1464462 None:intergenic 25.0%
! TGTTATGCTGAAGAATAATA+AGG + chr7_1:1464458-1464477 Msa1004110:intron 25.0%
! GAATTATCAGAATAGGATTA+TGG + chr7_1:1464554-1464573 Msa1004110:intron 25.0%
! GATAATATTCATAAGAGGTT+CGG - chr7_1:1465062-1465081 None:intergenic 25.0%
! ATCGAGATAATATTCATAAG+AGG - chr7_1:1465067-1465086 None:intergenic 25.0%
! CGCATAATAATTTCTTAAAC+AGG - chr7_1:1465382-1465401 None:intergenic 25.0%
! TCATACCTGATTGAAATTAT+TGG - chr7_1:1465736-1465755 None:intergenic 25.0%
!! GAATCTGTATGATTATTTCT+AGG + chr7_1:1465754-1465773 Msa1004110:intron 25.0%
!! TAGGTAGAATTCTGAAAAAT+TGG + chr7_1:1465979-1465998 Msa1004110:intron 25.0%
! ATGTATTCTCAATCACAAAA+TGG + chr7_1:1466809-1466828 Msa1004110:CDS 25.0%
! CAATCACAAAATGGATATAA+TGG + chr7_1:1466818-1466837 Msa1004110:CDS 25.0%
! TTGAAACAAAATCAACAGTT+TGG + chr7_1:1467149-1467168 Msa1004110:CDS 25.0%
! TGAAACAAAATCAACAGTTT+GGG + chr7_1:1467150-1467169 Msa1004110:CDS 25.0%
! CTGGTTAATTTAAACATATC+TGG + chr7_1:1467193-1467212 Msa1004110:CDS 25.0%
! ATTCTAATGTTGATCTTATC+TGG + chr7_1:1467266-1467285 Msa1004110:intron 25.0%
!! ATATTTACAGTTGATGTTAC+AGG - chr7_1:1467412-1467431 None:intergenic 25.0%
! TGTAACATCAACTGTAAATA+TGG + chr7_1:1467411-1467430 Msa1004110:CDS 25.0%
! GTAACATCAACTGTAAATAT+GGG + chr7_1:1467412-1467431 Msa1004110:CDS 25.0%
! AATGTTCAATTCAATCTCAT+CGG - chr7_1:1467756-1467775 None:intergenic 25.0%
! TTGAACATTATTCTCATAGA+TGG + chr7_1:1467767-1467786 Msa1004110:three_prime_UTR 25.0%
! ATCTGAGCTTTTTATTGAGT+TGG + chr7_1:1461179-1461198 Msa1004110:five_prime_UTR 30.0%
!!! TTTTTATTGAGTTGGATACG+TGG + chr7_1:1461187-1461206 Msa1004110:five_prime_UTR 30.0%
TACGTGGAAAAAATTTGAAG+TGG + chr7_1:1461203-1461222 Msa1004110:five_prime_UTR 30.0%
CAATTAATGGTAACACTTAC+AGG - chr7_1:1461477-1461496 None:intergenic 30.0%
! ACCCTAATCCTATTTTGTAA+CGG + chr7_1:1461580-1461599 Msa1004110:intron 30.0%
ATTTAGATGTCAAAGCTTAC+GGG - chr7_1:1461922-1461941 None:intergenic 30.0%
ATTCGGAATACTTTATGTTC+TGG + chr7_1:1462080-1462099 Msa1004110:intron 30.0%
AATCAGTAAATGATGCAGAA+GGG - chr7_1:1462117-1462136 None:intergenic 30.0%
TGATAAAGAAAGAATCGTAG+AGG + chr7_1:1462517-1462536 Msa1004110:CDS 30.0%
ATATCAGTAGAATTGTTGAG+AGG - chr7_1:1462582-1462601 None:intergenic 30.0%
!!! TTTTTAATTTCCCCCAGTTT+TGG + chr7_1:1462664-1462683 Msa1004110:intron 30.0%
TTATGGATTTACCAAAACTG+GGG - chr7_1:1462678-1462697 None:intergenic 30.0%
GATTATGGATTTACCAAAAC+TGG - chr7_1:1462680-1462699 None:intergenic 30.0%
GAAATAGAGAAGACAGATTA+TGG - chr7_1:1462695-1462714 None:intergenic 30.0%
TAATCTGTCTTCTCTATTTC+TGG + chr7_1:1462695-1462714 Msa1004110:intron 30.0%
GTATGACATGGAAAAATTGT+GGG + chr7_1:1462824-1462843 Msa1004110:intron 30.0%
TTATGGAAGAGAAAGAGAAA+TGG + chr7_1:1463067-1463086 Msa1004110:CDS 30.0%
TATGGAAGAGAAAGAGAAAT+GGG + chr7_1:1463068-1463087 Msa1004110:CDS 30.0%
GCTTAAATGCTTAACTATTG+AGG - chr7_1:1463473-1463492 None:intergenic 30.0%
TGTCTACATAAATACTCAAG+GGG - chr7_1:1463497-1463516 None:intergenic 30.0%
GATGTCTACATAAATACTCA+AGG - chr7_1:1463499-1463518 None:intergenic 30.0%
TGAGTATTTATGTAGACATC+AGG + chr7_1:1463499-1463518 Msa1004110:intron 30.0%
TATTAATCAAACGTCGTGTT+TGG - chr7_1:1463553-1463572 None:intergenic 30.0%
AAACACGACGTTTGATTAAT+AGG + chr7_1:1463552-1463571 Msa1004110:intron 30.0%
TCTAGAAGATTGCTTATTTC+CGG + chr7_1:1463578-1463597 Msa1004110:intron 30.0%
GCTTAAAGCTGATGAATTAT+AGG + chr7_1:1463631-1463650 Msa1004110:intron 30.0%
ACTAACTTTCTTAATTCCAG+TGG - chr7_1:1463985-1464004 None:intergenic 30.0%
TAATTAATCCTCTCTCTTGA+AGG - chr7_1:1464059-1464078 None:intergenic 30.0%
CAAGTAAGCTACAACATAAA+TGG + chr7_1:1464336-1464355 Msa1004110:intron 30.0%
CTACAACATAAATGGTATTG+AGG + chr7_1:1464344-1464363 Msa1004110:intron 30.0%
TTAGCATGATAAACAAAACG+AGG + chr7_1:1464417-1464436 Msa1004110:intron 30.0%
TTCTGATAATTCGATAGTCA+AGG - chr7_1:1464546-1464565 None:intergenic 30.0%
GACTATCGAATTATCAGAAT+AGG + chr7_1:1464547-1464566 Msa1004110:intron 30.0%
! TTTATGCAATGTTTTCTCAG+AGG + chr7_1:1464698-1464717 Msa1004110:intron 30.0%
GAAACTTTCTGAGCAAAATT+CGG + chr7_1:1464936-1464955 Msa1004110:CDS 30.0%
AAACTTTCTGAGCAAAATTC+GGG + chr7_1:1464937-1464956 Msa1004110:CDS 30.0%
TATGAAAGTTCATACCTTTC+AGG - chr7_1:1465012-1465031 None:intergenic 30.0%
ATGAATATTATCTCGATTGC+AGG + chr7_1:1465070-1465089 Msa1004110:intron 30.0%
TGAATATTATCTCGATTGCA+GGG + chr7_1:1465071-1465090 Msa1004110:intron 30.0%
TCAGTTGGATTATTGTTTAC+AGG - chr7_1:1465189-1465208 None:intergenic 30.0%
!! TGCTTGTTATTATGTTGTGT+TGG + chr7_1:1465324-1465343 Msa1004110:intron 30.0%
TTCAACATTATCCCATTAAG+CGG - chr7_1:1465523-1465542 None:intergenic 30.0%
TATTTCGCCAAAATTAGAAG+TGG - chr7_1:1465583-1465602 None:intergenic 30.0%
ATGCACGCTAAATCAAAAAA+GGG - chr7_1:1465871-1465890 None:intergenic 30.0%
TATGCACGCTAAATCAAAAA+AGG - chr7_1:1465872-1465891 None:intergenic 30.0%
AGGTTTATTATCATGCCATA+TGG - chr7_1:1465940-1465959 None:intergenic 30.0%
ATATGGCATGATAATAAACC+TGG + chr7_1:1465939-1465958 Msa1004110:intron 30.0%
TTATTCAAAGCTAAGAACTG+AGG - chr7_1:1466030-1466049 None:intergenic 30.0%
AAACCCAAAATTAGACATGT+CGG - chr7_1:1466243-1466262 None:intergenic 30.0%
!!! ACATGTCTAATTTTGGGTTT+GGG + chr7_1:1466243-1466262 Msa1004110:CDS 30.0%
AATATCAGTTTCCGAATCTT+GGG - chr7_1:1466348-1466367 None:intergenic 30.0%
!! TATAATGGATCTATGAACAG+TGG + chr7_1:1466833-1466852 Msa1004110:CDS 30.0%
!! ATAATGGATCTATGAACAGT+GGG + chr7_1:1466834-1466853 Msa1004110:CDS 30.0%
GGTTGAGAAACTAAAGAATT+TGG - chr7_1:1467115-1467134 None:intergenic 30.0%
GTTTCAAACTTATCTTTGGA+TGG - chr7_1:1467136-1467155 None:intergenic 30.0%
AGAGCATAATAGTTAACAGT+AGG - chr7_1:1467293-1467312 None:intergenic 30.0%
TTGACTTCGAATCCATTAAT+AGG + chr7_1:1467353-1467372 Msa1004110:CDS 30.0%
! TCTCTTTTCCTTCCTATTAA+TGG - chr7_1:1467368-1467387 None:intergenic 30.0%
TAATAGGAAGGAAAAGAGAA+TGG + chr7_1:1467369-1467388 Msa1004110:CDS 30.0%
TGTAAATATGGGTAAAGCTA+TGG + chr7_1:1467423-1467442 Msa1004110:CDS 30.0%
GTAAATATGGGTAAAGCTAT+GGG + chr7_1:1467424-1467443 Msa1004110:CDS 30.0%
CATTATTCTCATAGATGGAA+AGG + chr7_1:1467772-1467791 Msa1004110:three_prime_UTR 30.0%
TAGTAGTCAACATCAACATT+CGG + chr7_1:1467857-1467876 Msa1004110:three_prime_UTR 30.0%
! GTTGGTGTTCAAAAAATAAG+AGG - chr7_1:1468082-1468101 None:intergenic 30.0%
!!! CTTATTTTTTGAACACCAAC+AGG + chr7_1:1468082-1468101 Msa1004110:three_prime_UTR 30.0%
TAATATATCAAACCACCTGT+TGG - chr7_1:1468100-1468119 None:intergenic 30.0%
TACGTAGCAAAAATTTGACG+TGG + chr7_1:1461353-1461372 Msa1004110:five_prime_UTR 35.0%
! GCTACAATGAAGAAGGTTTT+TGG + chr7_1:1461436-1461455 Msa1004110:exon 35.0%
!!! AGGTTTTTGGTCAAACTGTT+AGG + chr7_1:1461449-1461468 Msa1004110:CDS 35.0%
!!! GGTTTTTGGTCAAACTGTTA+GGG + chr7_1:1461450-1461469 Msa1004110:CDS 35.0%
GCCGTTACAAAATAGGATTA+GGG - chr7_1:1461584-1461603 None:intergenic 35.0%
AGCCGTTACAAAATAGGATT+AGG - chr7_1:1461585-1461604 None:intergenic 35.0%
AGAGTTAGCCGTTACAAAAT+AGG - chr7_1:1461591-1461610 None:intergenic 35.0%
CAATCAGTAAATGATGCAGA+AGG - chr7_1:1462118-1462137 None:intergenic 35.0%
TTTGACAGTACTTGAGTACT+TGG + chr7_1:1462207-1462226 Msa1004110:CDS 35.0%
GAGATCAAGGAAACAATGTT+AGG + chr7_1:1462462-1462481 Msa1004110:CDS 35.0%
AAGAAAGAATCGTAGAGGTT+AGG + chr7_1:1462522-1462541 Msa1004110:CDS 35.0%
TATGGATTTACCAAAACTGG+GGG - chr7_1:1462677-1462696 None:intergenic 35.0%
GGTATGACATGGAAAAATTG+TGG + chr7_1:1462823-1462842 Msa1004110:intron 35.0%
GATAGAAATGGCTATGGTTA+TGG + chr7_1:1463050-1463069 Msa1004110:CDS 35.0%
TCGTTATGGTAGAGATTATG+AGG + chr7_1:1463127-1463146 Msa1004110:CDS 35.0%
AGAGATTATGAGGAACGTTA+CGG + chr7_1:1463137-1463156 Msa1004110:CDS 35.0%
ATTATGATGATACAAGGAGC+AGG + chr7_1:1463213-1463232 Msa1004110:CDS 35.0%
TCTACATAAATACTCAAGGG+GGG - chr7_1:1463495-1463514 None:intergenic 35.0%
GTCTACATAAATACTCAAGG+GGG - chr7_1:1463496-1463515 None:intergenic 35.0%
GATTATTAGAGTTGGCAACT+GGG - chr7_1:1463877-1463896 None:intergenic 35.0%
TGATTATTAGAGTTGGCAAC+TGG - chr7_1:1463878-1463897 None:intergenic 35.0%
AATTCCAGTGGTTTACTCAA+GGG - chr7_1:1463973-1463992 None:intergenic 35.0%
TAATTCCAGTGGTTTACTCA+AGG - chr7_1:1463974-1463993 None:intergenic 35.0%
AACATTATCCTTCAAGAGAG+AGG + chr7_1:1464048-1464067 Msa1004110:intron 35.0%
CATGACTACAGACTCTAAAT+GGG - chr7_1:1464503-1464522 None:intergenic 35.0%
ACATGACTACAGACTCTAAA+TGG - chr7_1:1464504-1464523 None:intergenic 35.0%
CAGAATAGGATTATGGCTTT+AGG + chr7_1:1464561-1464580 Msa1004110:intron 35.0%
TAAAGTTGAAGACCAATCAC+TGG + chr7_1:1464730-1464749 Msa1004110:CDS 35.0%
GGTATGAACTTTCATACAAG+AGG + chr7_1:1465016-1465035 Msa1004110:intron 35.0%
TAGGATTATCACTTGCATGA+GGG - chr7_1:1465137-1465156 None:intergenic 35.0%
TCAACATTATCCCATTAAGC+GGG - chr7_1:1465522-1465541 None:intergenic 35.0%
! TTTGGCGAAATAGATTTGCT+CGG + chr7_1:1465591-1465610 Msa1004110:CDS 35.0%
ATTGAAATTATTGGACCCAG+AGG - chr7_1:1465727-1465746 None:intergenic 35.0%
TGGGTCCAATAATTTCAATC+AGG + chr7_1:1465728-1465747 Msa1004110:CDS 35.0%
ACGCTAAATCAAAAAAGGGT+GGG - chr7_1:1465867-1465886 None:intergenic 35.0%
CATAACTGTAACTAGTGTGT+GGG + chr7_1:1465888-1465907 Msa1004110:intron 35.0%
TTGAATGGTGAATCACCAAA+CGG - chr7_1:1466137-1466156 None:intergenic 35.0%
TTAAAACCATCTGATTGGGA+TGG - chr7_1:1466218-1466237 None:intergenic 35.0%
GGCATTAAAACCATCTGATT+GGG - chr7_1:1466222-1466241 None:intergenic 35.0%
! AATGCCGACATGTCTAATTT+TGG + chr7_1:1466236-1466255 Msa1004110:CDS 35.0%
! ATGCCGACATGTCTAATTTT+GGG + chr7_1:1466237-1466256 Msa1004110:CDS 35.0%
!!! GACATGTCTAATTTTGGGTT+TGG + chr7_1:1466242-1466261 Msa1004110:CDS 35.0%
!!! CATGTCTAATTTTGGGTTTG+GGG + chr7_1:1466244-1466263 Msa1004110:CDS 35.0%
GAATATCAGTTTCCGAATCT+TGG - chr7_1:1466349-1466368 None:intergenic 35.0%
TGGGTATATGATGAGCTAAA+GGG - chr7_1:1467046-1467065 None:intergenic 35.0%
ATGGGTATATGATGAGCTAA+AGG - chr7_1:1467047-1467066 None:intergenic 35.0%
ACTAATCCGTTAGCAGATAT+TGG + chr7_1:1467328-1467347 Msa1004110:CDS 35.0%
TCAATGCCAATATCTGCTAA+CGG - chr7_1:1467337-1467356 None:intergenic 35.0%
CTTCGAATCCATTAATAGGA+AGG + chr7_1:1467357-1467376 Msa1004110:CDS 35.0%
ACCTAATCCAAATTCGATGA+TGG + chr7_1:1467489-1467508 Msa1004110:CDS 35.0%
CCTAATCCAAATTCGATGAT+GGG + chr7_1:1467490-1467509 Msa1004110:CDS 35.0%
ATTATAGTTACCTGGCATGT+TGG - chr7_1:1467683-1467702 None:intergenic 35.0%
AATAATAACATGATGCGTCC+CGG + chr7_1:1467700-1467719 Msa1004110:CDS 35.0%
! TGTTGATGTTGACTACTAGT+AGG - chr7_1:1467855-1467874 None:intergenic 35.0%
GAATAAACATACACCACACT+AGG - chr7_1:1467929-1467948 None:intergenic 35.0%
GGGATAGAATAACCTTACTT+GGG + chr7_1:1468035-1468054 Msa1004110:three_prime_UTR 35.0%
AGTAAGCAATAACCCAAGTA+AGG - chr7_1:1468050-1468069 None:intergenic 35.0%
!!! ATTTTTTGAACACCAACAGG+TGG + chr7_1:1468085-1468104 Msa1004110:three_prime_UTR 35.0%
AGCTAACCATCAATCGAGAA+CGG + chr7_1:1461258-1461277 Msa1004110:five_prime_UTR 40.0%
!! AAGAAAGTGCTCAAAGTTCC+TGG + chr7_1:1461644-1461663 Msa1004110:CDS 40.0%
TTTACCTTCTGTTCAATGCC+AGG - chr7_1:1461665-1461684 None:intergenic 40.0%
ATGCTACTAGCAATGAACCA+TGG + chr7_1:1461849-1461868 Msa1004110:CDS 40.0%
TGCTACTAGCAATGAACCAT+GGG + chr7_1:1461850-1461869 Msa1004110:CDS 40.0%
ATCTGGTATTCATGACTGCA+GGG - chr7_1:1461990-1462009 None:intergenic 40.0%
AGACTACTGACATGATCATC+TGG - chr7_1:1462007-1462026 None:intergenic 40.0%
AGATGATCATGTCAGTAGTC+TGG + chr7_1:1462006-1462025 Msa1004110:CDS 40.0%
TGGAAACGAATTAACGACAC+TGG + chr7_1:1462026-1462045 Msa1004110:CDS 40.0%
TTAACGACACTGGCAAGAAT+TGG + chr7_1:1462036-1462055 Msa1004110:CDS 40.0%
ACTGCTCACTGTTCATTAAC+AGG + chr7_1:1462183-1462202 Msa1004110:intron 40.0%
CTGTTAGTCAATTTCCACAC+AGG + chr7_1:1462329-1462348 Msa1004110:intron 40.0%
ACGGTCATTTGATCGAAACT+AGG - chr7_1:1462357-1462376 None:intergenic 40.0%
! TGGGTGTTGTGGCAAAATAA+AGG - chr7_1:1462788-1462807 None:intergenic 40.0%
TACCACCAGTTACAAGAGTT+GGG - chr7_1:1462807-1462826 None:intergenic 40.0%
ATACCACCAGTTACAAGAGT+TGG - chr7_1:1462808-1462827 None:intergenic 40.0%
TTGTAACTGGTGGTATGACA+TGG + chr7_1:1462812-1462831 Msa1004110:intron 40.0%
TGGTGTATTATTGCGAAACC+TGG - chr7_1:1462943-1462962 None:intergenic 40.0%
AGGTTTCGCAATAATACACC+AGG + chr7_1:1462942-1462961 Msa1004110:intron 40.0%
TTTCGCAATAATACACCAGG+TGG + chr7_1:1462945-1462964 Msa1004110:intron 40.0%
GAGGAAGATAGAAATGGCTA+TGG + chr7_1:1463044-1463063 Msa1004110:CDS 40.0%
ATTATGAGGAACGTTACGGT+AGG + chr7_1:1463141-1463160 Msa1004110:CDS 40.0%
TTATGAGGAACGTTACGGTA+GGG + chr7_1:1463142-1463161 Msa1004110:CDS 40.0%
ACGGTTACAGAGATGATGAT+AGG + chr7_1:1463165-1463184 Msa1004110:CDS 40.0%
CGGTTACAGAGATGATGATA+GGG + chr7_1:1463166-1463185 Msa1004110:CDS 40.0%
GGTTACAGAGATGATGATAG+GGG + chr7_1:1463167-1463186 Msa1004110:CDS 40.0%
! GTAGACATCAGGATTTTCGA+TGG + chr7_1:1463510-1463529 Msa1004110:intron 40.0%
CATAAAGTAAGGATGAGGCT+AGG - chr7_1:1463606-1463625 None:intergenic 40.0%
CCAAAGCAACAAATCTAAGC+AGG - chr7_1:1463831-1463850 None:intergenic 40.0%
!! CCTGCTTAGATTTGTTGCTT+TGG + chr7_1:1463828-1463847 Msa1004110:intron 40.0%
ATTCCAGTGGTTTACTCAAG+GGG - chr7_1:1463972-1463991 None:intergenic 40.0%
TTTACCTTGCTTCCAGTGAT+TGG - chr7_1:1464745-1464764 None:intergenic 40.0%
TGAACTTTCATACAAGAGGC+TGG + chr7_1:1465020-1465039 Msa1004110:intron 40.0%
TTGCAGGGATGTTGAAACTT+CGG + chr7_1:1465086-1465105 Msa1004110:intron 40.0%
AGGATTATCACTTGCATGAG+GGG - chr7_1:1465136-1465155 None:intergenic 40.0%
CTAGGATTATCACTTGCATG+AGG - chr7_1:1465138-1465157 None:intergenic 40.0%
TTTACAGGAGAAGATCCAGT+AGG - chr7_1:1465174-1465193 None:intergenic 40.0%
!! TAGTACTGCTGTTTCTACTC+AGG + chr7_1:1465242-1465261 Msa1004110:CDS 40.0%
GGGTCAAAGAAATCATCAGT+GGG - chr7_1:1465276-1465295 None:intergenic 40.0%
TGGGTCAAAGAAATCATCAG+TGG - chr7_1:1465277-1465296 None:intergenic 40.0%
CAACTTTACAGACCTGATGT+AGG - chr7_1:1465306-1465325 None:intergenic 40.0%
! TTGTATTTCCTTTGGGGAGT+TGG + chr7_1:1465455-1465474 Msa1004110:intron 40.0%
! TTGTAATTTGCCCCGCTTAA+TGG + chr7_1:1465508-1465527 Msa1004110:intron 40.0%
! TGTAATTTGCCCCGCTTAAT+GGG + chr7_1:1465509-1465528 Msa1004110:intron 40.0%
CAACATTATCCCATTAAGCG+GGG - chr7_1:1465521-1465540 None:intergenic 40.0%
! GCTCCAACCACTTCTAATTT+TGG + chr7_1:1465573-1465592 Msa1004110:CDS 40.0%
TCGCCAAAATTAGAAGTGGT+TGG - chr7_1:1465579-1465598 None:intergenic 40.0%
GTTGAAATTCCTGATGTAGC+GGG - chr7_1:1465660-1465679 None:intergenic 40.0%
GGTTGAAATTCCTGATGTAG+CGG - chr7_1:1465661-1465680 None:intergenic 40.0%
TTGAACCAGTGTTTGCTTCA+GGG - chr7_1:1465683-1465702 None:intergenic 40.0%
AAATTATTGGACCCAGAGGA+TGG - chr7_1:1465723-1465742 None:intergenic 40.0%
CGCTAAATCAAAAAAGGGTG+GGG - chr7_1:1465866-1465885 None:intergenic 40.0%
CACGCTAAATCAAAAAAGGG+TGG - chr7_1:1465868-1465887 None:intergenic 40.0%
GCATAACTGTAACTAGTGTG+TGG + chr7_1:1465887-1465906 Msa1004110:intron 40.0%
CTGTCACGAAATGTACCATA+TGG + chr7_1:1465922-1465941 Msa1004110:intron 40.0%
!! CAGTCTTTTGAAGATCCGTT+TGG + chr7_1:1466119-1466138 Msa1004110:intron 40.0%
! GTTTGGTGATTCACCATTCA+AGG + chr7_1:1466136-1466155 Msa1004110:CDS 40.0%
!! ACAGAAGTATCAGCCTTGAA+TGG - chr7_1:1466152-1466171 None:intergenic 40.0%
CGGCATTAAAACCATCTGAT+TGG - chr7_1:1466223-1466242 None:intergenic 40.0%
CGAATCTTGGGACAAAAACT+GGG - chr7_1:1466336-1466355 None:intergenic 40.0%
! CCAGTTTTTGTCCCAAGATT+CGG + chr7_1:1466334-1466353 Msa1004110:CDS 40.0%
TGTGATGTCATCTCAGGTAA+TGG - chr7_1:1466395-1466414 None:intergenic 40.0%
! AACAGTTCAGCTCCTACTTT+TGG + chr7_1:1466419-1466438 Msa1004110:CDS 40.0%
TTGAAAAGGAAGGTGAAGGT+TGG - chr7_1:1466445-1466464 None:intergenic 40.0%
GAAGTTGAAAAGGAAGGTGA+AGG - chr7_1:1466449-1466468 None:intergenic 40.0%
CCAGATGAAGTTGAAAAGGA+AGG - chr7_1:1466455-1466474 None:intergenic 40.0%
! CCTTCCTTTTCAACTTCATC+TGG + chr7_1:1466452-1466471 Msa1004110:CDS 40.0%
TGGTCCAGATGAAGTTGAAA+AGG - chr7_1:1466459-1466478 None:intergenic 40.0%
! TGACCAGTTGGTTCAGAAAA+TGG - chr7_1:1466479-1466498 None:intergenic 40.0%
GGAAAATTGACCACTTGGAA+GGG - chr7_1:1466552-1466571 None:intergenic 40.0%
TGACCAGAATGAGAAGGAAA+GGG - chr7_1:1466638-1466657 None:intergenic 40.0%
TTGACCAGAATGAGAAGGAA+AGG - chr7_1:1466639-1466658 None:intergenic 40.0%
CAATCTACTGCACAAACAAG+CGG + chr7_1:1466728-1466747 Msa1004110:CDS 40.0%
TGGAGTAAGAGATGTATCCA+GGG - chr7_1:1466777-1466796 None:intergenic 40.0%
!! GAATACATGTTTTGAGCTCC+TGG - chr7_1:1466797-1466816 None:intergenic 40.0%
! GGAAAGTTTGTGATTTGTGC+CGG - chr7_1:1466929-1466948 None:intergenic 40.0%
ATCACAAACTTTCCCCATCA+TGG + chr7_1:1466935-1466954 Msa1004110:CDS 40.0%
AACTGTGATGCTTGATCAGT+TGG - chr7_1:1466983-1467002 None:intergenic 40.0%
TTCAACAACCAGAGCTTCTT+TGG + chr7_1:1467001-1467020 Msa1004110:CDS 40.0%
AGAGCTTCTTTGGACAACAA+GGG + chr7_1:1467011-1467030 Msa1004110:CDS 40.0%
! ATAGCATACGGTGAAGCATT+GGG - chr7_1:1467082-1467101 None:intergenic 40.0%
AATAGCATACGGTGAAGCAT+TGG - chr7_1:1467083-1467102 None:intergenic 40.0%
!! TTCACCGTATGCTATTTCAG+CGG + chr7_1:1467087-1467106 Msa1004110:CDS 40.0%
GATGTTACAGGTGTGTTAGT+GGG - chr7_1:1467400-1467419 None:intergenic 40.0%
TGATGTTACAGGTGTGTTAG+TGG - chr7_1:1467401-1467420 None:intergenic 40.0%
CCCATCATCGAATTTGGATT+AGG - chr7_1:1467493-1467512 None:intergenic 40.0%
!! AGTAGGCACTGGTATTGATA+TGG - chr7_1:1467838-1467857 None:intergenic 40.0%
TTCTGTAAAGTGACCTAGTG+TGG + chr7_1:1467913-1467932 Msa1004110:three_prime_UTR 40.0%
CGGGATAGAATAACCTTACT+TGG + chr7_1:1468034-1468053 Msa1004110:three_prime_UTR 40.0%
! AGATAGCAGTTTGGGCCTTT+TGG + chr7_1:1461388-1461407 Msa1004110:five_prime_UTR 45.0%
ACCAGCTGCTACAATGAAGA+AGG + chr7_1:1461429-1461448 Msa1004110:exon 45.0%
ACCTTCTTCATTGTAGCAGC+TGG - chr7_1:1461433-1461452 None:intergenic 45.0%
! AGTTCCTGGCATTGAACAGA+AGG + chr7_1:1461658-1461677 Msa1004110:CDS 45.0%
TGATTTCTATCCCCTCTACC+AGG + chr7_1:1461820-1461839 Msa1004110:intron 45.0%
AGCATCAAGAACCTGGTAGA+GGG - chr7_1:1461834-1461853 None:intergenic 45.0%
TAGCATCAAGAACCTGGTAG+AGG - chr7_1:1461835-1461854 None:intergenic 45.0%
TGCTAGTAGCATCAAGAACC+TGG - chr7_1:1461841-1461860 None:intergenic 45.0%
GCTACTAGCAATGAACCATG+GGG + chr7_1:1461851-1461870 Msa1004110:CDS 45.0%
CATCTGGTATTCATGACTGC+AGG - chr7_1:1461991-1462010 None:intergenic 45.0%
GACAGTACTTGAGTACTTGG+TGG + chr7_1:1462210-1462229 Msa1004110:CDS 45.0%
ATCGAAACTAGGTACCTGTG+TGG - chr7_1:1462346-1462365 None:intergenic 45.0%
GTCGGACAAAGTCTGTTCAT+AGG - chr7_1:1462417-1462436 None:intergenic 45.0%
GATTCCAGTGGAAGAGATCA+AGG + chr7_1:1462449-1462468 Msa1004110:CDS 45.0%
GTTTCCTTGATCTCTTCCAC+TGG - chr7_1:1462456-1462475 None:intergenic 45.0%
AATCGTAGAGGTTAGGCAGA+AGG + chr7_1:1462529-1462548 Msa1004110:CDS 45.0%
GCAGAAGGCTGCTGTTAATA+GGG + chr7_1:1462544-1462563 Msa1004110:CDS 45.0%
! GTTACAAGAGTTGGGTGTTG+TGG - chr7_1:1462799-1462818 None:intergenic 45.0%
CAACACCCAACTCTTGTAAC+TGG + chr7_1:1462799-1462818 Msa1004110:intron 45.0%
GGAAAAATTGTGGGTCTCGT+TGG + chr7_1:1462833-1462852 Msa1004110:intron 45.0%
!! CACTCAAGCATTGGAAGCTA+TGG + chr7_1:1462987-1463006 Msa1004110:CDS 45.0%
AAGAAGATCGTTATGCGAGC+AGG + chr7_1:1463021-1463040 Msa1004110:CDS 45.0%
AGAAGATCGTTATGCGAGCA+GGG + chr7_1:1463022-1463041 Msa1004110:CDS 45.0%
AGCAGGGAGGAAGATAGAAA+TGG + chr7_1:1463038-1463057 Msa1004110:CDS 45.0%
!! TGGGCTCTAGAGATGATGAT+CGG + chr7_1:1463087-1463106 Msa1004110:CDS 45.0%
AATCGCGATGGAGATCGTTA+TGG + chr7_1:1463113-1463132 Msa1004110:CDS 45.0%
GATCGTGATTTCGATGACGA+TGG + chr7_1:1463248-1463267 Msa1004110:CDS 45.0%
CAACTGGGCAGTACATTCTT+TGG - chr7_1:1463862-1463881 None:intergenic 45.0%
TTCCAGTGGTTTACTCAAGG+GGG - chr7_1:1463971-1463990 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_1:1464117-1464136 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_1:1464118-1464137 None:intergenic 45.0%
AAGACCAATCACTGGAAGCA+AGG + chr7_1:1464738-1464757 Msa1004110:CDS 45.0%
TACAAACGAGCAGACTTCAG+CGG + chr7_1:1464914-1464933 Msa1004110:intron 45.0%
TGCTCCTCCTAGTTATGAAG+AGG + chr7_1:1464960-1464979 Msa1004110:CDS 45.0%
ACAGCCTCTTCATAACTAGG+AGG - chr7_1:1464967-1464986 None:intergenic 45.0%
CCAACAGCCTCTTCATAACT+AGG - chr7_1:1464970-1464989 None:intergenic 45.0%
CCTAGTTATGAAGAGGCTGT+TGG + chr7_1:1464967-1464986 Msa1004110:CDS 45.0%
GTTCATACCTTTCAGGCACA+GGG - chr7_1:1465005-1465024 None:intergenic 45.0%
AGTTCATACCTTTCAGGCAC+AGG - chr7_1:1465006-1465025 None:intergenic 45.0%
!!! GAGGTTCGGTTTTGAACAAG+TGG - chr7_1:1465048-1465067 None:intergenic 45.0%
ACTAGCAGCAACAGATGTAC+TGG - chr7_1:1465226-1465245 None:intergenic 45.0%
GATGATTTCTTTGACCCACG+TGG + chr7_1:1465279-1465298 Msa1004110:CDS 45.0%
TGAACCAGTGTTTGCTTCAG+GGG - chr7_1:1465682-1465701 None:intergenic 45.0%
GTTGAACCAGTGTTTGCTTC+AGG - chr7_1:1465684-1465703 None:intergenic 45.0%
ATCAAAAAAGGGTGGGGACA+AGG - chr7_1:1465860-1465879 None:intergenic 45.0%
AACTGTAACTAGTGTGTGGG+TGG + chr7_1:1465891-1465910 Msa1004110:intron 45.0%
ACTGTAACTAGTGTGTGGGT+GGG + chr7_1:1465892-1465911 Msa1004110:intron 45.0%
! ACTCAGTTTGTTCAACGACC+AGG - chr7_1:1465960-1465979 None:intergenic 45.0%
GGTCGTTGAACAAACTGAGT+AGG + chr7_1:1465960-1465979 Msa1004110:intron 45.0%
ACTGAACCATCCCAATCAGA+TGG + chr7_1:1466209-1466228 Msa1004110:CDS 45.0%
! GAGAAAGGTTGAGTGTCACT+GGG - chr7_1:1466305-1466324 None:intergenic 45.0%
AGAGAAAGGTTGAGTGTCAC+TGG - chr7_1:1466306-1466325 None:intergenic 45.0%
AACTGGGAGTTAGCAGAGAA+AGG - chr7_1:1466320-1466339 None:intergenic 45.0%
CCGAATCTTGGGACAAAAAC+TGG - chr7_1:1466337-1466356 None:intergenic 45.0%
TTCTGCTGTGATGTCATCTC+AGG - chr7_1:1466401-1466420 None:intergenic 45.0%
! GGACCATTTTCTGAACCAAC+TGG + chr7_1:1466473-1466492 Msa1004110:CDS 45.0%
! TGAGGAGTAAGTTGACCAGT+TGG - chr7_1:1466491-1466510 None:intergenic 45.0%
GGTCAACTTACTCCTCATCA+AGG + chr7_1:1466494-1466513 Msa1004110:CDS 45.0%
!! AAGGGTTTGTGCAGGTTGAT+TGG - chr7_1:1466534-1466553 None:intergenic 45.0%
GGGAAAATTGACCACTTGGA+AGG - chr7_1:1466553-1466572 None:intergenic 45.0%
GAACTAGAAGCTGAAAAGCC+TGG - chr7_1:1466578-1466597 None:intergenic 45.0%
CAACCCTTTCCTTCTCATTC+TGG + chr7_1:1466632-1466651 Msa1004110:CDS 45.0%
CAAAAGGTGGCTGCATAGAA+TGG - chr7_1:1466694-1466713 None:intergenic 45.0%
CAAACAAGCGGTCATACCTA+CGG + chr7_1:1466740-1466759 Msa1004110:CDS 45.0%
CTGGAGTAAGAGATGTATCC+AGG - chr7_1:1466778-1466797 None:intergenic 45.0%
CTGGATACATCTCTTACTCC+AGG + chr7_1:1466776-1466795 Msa1004110:CDS 45.0%
TTGTGAAGGAAAGCCTGTTG+AGG - chr7_1:1466879-1466898 None:intergenic 45.0%
ACAAACTTTCCCCATCATGG+AGG + chr7_1:1466938-1466957 Msa1004110:CDS 45.0%
AGCAGTAGATCCTCCATGAT+GGG - chr7_1:1466951-1466970 None:intergenic 45.0%
AAGCAGTAGATCCTCCATGA+TGG - chr7_1:1466952-1466971 None:intergenic 45.0%
GATGCTTGATCAGTTGGAGA+GGG - chr7_1:1466977-1466996 None:intergenic 45.0%
TGATGCTTGATCAGTTGGAG+AGG - chr7_1:1466978-1466997 None:intergenic 45.0%
! CTTGTTGTCCAAAGAAGCTC+TGG - chr7_1:1467012-1467031 None:intergenic 45.0%
CAGAGCTTCTTTGGACAACA+AGG + chr7_1:1467010-1467029 Msa1004110:CDS 45.0%
TTTGGGCAGACACATTAAGC+AGG + chr7_1:1467167-1467186 Msa1004110:CDS 45.0%
TTGGGCAGACACATTAAGCA+GGG + chr7_1:1467168-1467187 Msa1004110:CDS 45.0%
ATGGGTAAAGCTATGGGATC+AGG + chr7_1:1467430-1467449 Msa1004110:CDS 45.0%
AAAGCTATGGGATCAGGTTC+AGG + chr7_1:1467436-1467455 Msa1004110:CDS 45.0%
CCAGAACCCATCATCGAATT+TGG - chr7_1:1467499-1467518 None:intergenic 45.0%
!! CCAAATTCGATGATGGGTTC+TGG + chr7_1:1467496-1467515 Msa1004110:CDS 45.0%
!! TTCGATGATGGGTTCTGGTA+TGG + chr7_1:1467501-1467520 Msa1004110:CDS 45.0%
!! TCGATGATGGGTTCTGGTAT+GGG + chr7_1:1467502-1467521 Msa1004110:CDS 45.0%
ACATCCATGGGTATGGGTAT+GGG + chr7_1:1467589-1467608 Msa1004110:CDS 45.0%
TACCAGATGCAACCTCCTAA+TGG + chr7_1:1467643-1467662 Msa1004110:CDS 45.0%
TTCCATTAGGAGGTTGCATC+TGG - chr7_1:1467648-1467667 None:intergenic 45.0%
GGTTATGCTCAACAGCCATA+TGG + chr7_1:1467724-1467743 Msa1004110:CDS 45.0%
TATGCTCAACAGCCATATGG+TGG + chr7_1:1467727-1467746 Msa1004110:CDS 45.0%
TCTCATCGGTATCCACCATA+TGG - chr7_1:1467742-1467761 None:intergenic 45.0%
! TGTTGACTACTAGTAGGCAC+TGG - chr7_1:1467849-1467868 None:intergenic 45.0%
!!! TTTTGGGGTCACCCTTCTTT+AGG + chr7_1:1467979-1467998 Msa1004110:three_prime_UTR 45.0%
! TTTGGGGTCACCCTTCTTTA+GGG + chr7_1:1467980-1467999 Msa1004110:three_prime_UTR 45.0%
! GCTCAAAGCACCCTAAAGAA+GGG - chr7_1:1467993-1468012 None:intergenic 45.0%
! TGCTCAAAGCACCCTAAAGA+AGG - chr7_1:1467994-1468013 None:intergenic 45.0%
AGGTTATTCTATCCCGTCAC+TGG - chr7_1:1468030-1468049 None:intergenic 45.0%
!! AATAATTAATTATCAATTAA+TGG - chr7_1:1461490-1461509 None:intergenic 5.0%
! CAAGCACCGTTCTCGATTGA+TGG - chr7_1:1461267-1461286 None:intergenic 50.0%
GCATCAAGAACCTGGTAGAG+GGG - chr7_1:1461833-1461852 None:intergenic 50.0%
AATGAACCATGGGGTCCTCA+TGG + chr7_1:1461860-1461879 Msa1004110:CDS 50.0%
TCTGCAAGCAGTGTTCCATG+AGG - chr7_1:1461878-1461897 None:intergenic 50.0%
ACTGCTTGCAGACATTGCTC+AGG + chr7_1:1461886-1461905 Msa1004110:CDS 50.0%
ACGACACTGGCAAGAATTGG+CGG + chr7_1:1462039-1462058 Msa1004110:CDS 50.0%
GAATTGGCGGCATGTCTACA+AGG + chr7_1:1462052-1462071 Msa1004110:CDS 50.0%
! CTTGAGTACTTGGTGGCTCA+TGG + chr7_1:1462217-1462236 Msa1004110:CDS 50.0%
GGCAGAAGGCTGCTGTTAAT+AGG + chr7_1:1462543-1462562 Msa1004110:CDS 50.0%
CACCCAACTCTTGTAACTGG+TGG + chr7_1:1462802-1462821 Msa1004110:intron 50.0%
CCAGGTCTATACATTCCACC+TGG - chr7_1:1462963-1462982 None:intergenic 50.0%
CCAGGTGGAATGTATAGACC+TGG + chr7_1:1462960-1462979 Msa1004110:intron 50.0%
CCAATGCTTGAGTGTGAACC+AGG - chr7_1:1462981-1463000 None:intergenic 50.0%
CCTGGTTCACACTCAAGCAT+TGG + chr7_1:1462978-1462997 Msa1004110:CDS 50.0%
GATGATCGGTACAATCGCGA+TGG + chr7_1:1463101-1463120 Msa1004110:CDS 50.0%
GCTTGGCTAGGAAGATCACA+AGG + chr7_1:1463364-1463383 Msa1004110:intron 50.0%
! GTCTGCACTGCACTGAGTTT+TGG + chr7_1:1463401-1463420 Msa1004110:intron 50.0%
GTAAGGATGAGGCTAGGATC+CGG - chr7_1:1463600-1463619 None:intergenic 50.0%
TCCAGTGGTTTACTCAAGGG+GGG - chr7_1:1463970-1463989 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_1:1464113-1464132 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_1:1464119-1464138 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_1:1464116-1464135 Msa1004110:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + chr7_1:1464123-1464142 Msa1004110:intron 50.0%
AGAAGATCCAGTAGGAGCAG+AGG - chr7_1:1465166-1465185 None:intergenic 50.0%
GCAGCAGCAGTTACTTCAGT+TGG - chr7_1:1465204-1465223 None:intergenic 50.0%
! TCCTTTGGGGAGTTGGATCT+TGG + chr7_1:1465462-1465481 Msa1004110:intron 50.0%
GGATCTTGGCACTTGGTTGT+TGG + chr7_1:1465476-1465495 Msa1004110:intron 50.0%
TTAGAAGTGGTTGGAGCAGC+TGG - chr7_1:1465570-1465589 None:intergenic 50.0%
TCAACCCCTGAAGCAAACAC+TGG + chr7_1:1465675-1465694 Msa1004110:CDS 50.0%
! TCTTTTGCAGCACCATCCTC+TGG + chr7_1:1465708-1465727 Msa1004110:CDS 50.0%
! CTTTTGCAGCACCATCCTCT+GGG + chr7_1:1465709-1465728 Msa1004110:CDS 50.0%
! TGAGGTGCATGGTGTTGAGA+TGG - chr7_1:1466185-1466204 None:intergenic 50.0%
! GTTCAGTAGTCTGAGGTGCA+TGG - chr7_1:1466196-1466215 None:intergenic 50.0%
TGGGATGGTTCAGTAGTCTG+AGG - chr7_1:1466203-1466222 None:intergenic 50.0%
! ATCTCAGGTAATGGTGCAGG+AGG - chr7_1:1466386-1466405 None:intergenic 50.0%
! GTCATCTCAGGTAATGGTGC+AGG - chr7_1:1466389-1466408 None:intergenic 50.0%
! GGTGAAGGTTGGCCAAAAGT+AGG - chr7_1:1466434-1466453 None:intergenic 50.0%
GCAGCTGAGAAACCTTGATG+AGG - chr7_1:1466509-1466528 None:intergenic 50.0%
GGCTGGGAAAATTGACCACT+TGG - chr7_1:1466557-1466576 None:intergenic 50.0%
! AGTGGTCAATTTTCCCAGCC+AGG + chr7_1:1466557-1466576 Msa1004110:CDS 50.0%
AGAAGCTGAAAAGCCTGGCT+GGG - chr7_1:1466573-1466592 None:intergenic 50.0%
TAGAAGCTGAAAAGCCTGGC+TGG - chr7_1:1466574-1466593 None:intergenic 50.0%
!! CTGTGCATATGGACTGGTAG+AGG - chr7_1:1466612-1466631 None:intergenic 50.0%
GGAAAGGGTTGCTGTGCATA+TGG - chr7_1:1466623-1466642 None:intergenic 50.0%
! CCAGGTTGACCAGAATGAGA+AGG - chr7_1:1466644-1466663 None:intergenic 50.0%
CCTTCTCATTCTGGTCAACC+TGG + chr7_1:1466641-1466660 Msa1004110:CDS 50.0%
! CAGCCACCTTTTGCTTCTCA+AGG + chr7_1:1466701-1466720 Msa1004110:CDS 50.0%
! CCACCTTTTGCTTCTCAAGG+CGG + chr7_1:1466704-1466723 Msa1004110:CDS 50.0%
TGACCGCCTTGAGAAGCAAA+AGG - chr7_1:1466710-1466729 None:intergenic 50.0%
AGTGGGAACTACTTGCCACA+GGG + chr7_1:1466851-1466870 Msa1004110:CDS 50.0%
GCTTGGGGAGTCATTTGTGA+AGG - chr7_1:1466893-1466912 None:intergenic 50.0%
!! ATTTGTGCCGGTTGTGCTGT+TGG - chr7_1:1466917-1466936 None:intergenic 50.0%
GCAGTAGATCCTCCATGATG+GGG - chr7_1:1466950-1466969 None:intergenic 50.0%
ATTGGGAGCAGGCACTTGAT+GGG - chr7_1:1467065-1467084 None:intergenic 50.0%
!! GGTGCCGCTGAAATAGCATA+CGG - chr7_1:1467094-1467113 None:intergenic 50.0%
TGGGCAGACACATTAAGCAG+GGG + chr7_1:1467169-1467188 Msa1004110:CDS 50.0%
AGACACATTAAGCAGGGGAC+TGG + chr7_1:1467174-1467193 Msa1004110:CDS 50.0%
ATGGGATCAGGTTCAGGCAT+AGG + chr7_1:1467442-1467461 Msa1004110:CDS 50.0%
! ATGGGTTCTGGTATGGGCAT+GGG + chr7_1:1467508-1467527 Msa1004110:CDS 50.0%
TTCTGGTATGGGCATGGGTA+TGG + chr7_1:1467513-1467532 Msa1004110:CDS 50.0%
TCTGGTATGGGCATGGGTAT+GGG + chr7_1:1467514-1467533 Msa1004110:CDS 50.0%
TATGGGCATGGGTATGGGAA+TGG + chr7_1:1467519-1467538 Msa1004110:CDS 50.0%
ATGGGCATGGGTATGGGAAT+GGG + chr7_1:1467520-1467539 Msa1004110:CDS 50.0%
GGTATGGGTATGGGAGGTTA+CGG + chr7_1:1467556-1467575 Msa1004110:CDS 50.0%
AGGCATGACATCCATGGGTA+TGG + chr7_1:1467582-1467601 Msa1004110:CDS 50.0%
GGCATGACATCCATGGGTAT+GGG + chr7_1:1467583-1467602 Msa1004110:CDS 50.0%
GACATCCATGGGTATGGGTA+TGG + chr7_1:1467588-1467607 Msa1004110:CDS 50.0%
GGTATGGGTATGGGTGGTAT+GGG + chr7_1:1467598-1467617 Msa1004110:CDS 50.0%
GTATGGGTATGGGTGGTATG+GGG + chr7_1:1467599-1467618 Msa1004110:CDS 50.0%
TATGGGTATGGGTGGTATGG+GGG + chr7_1:1467600-1467619 Msa1004110:CDS 50.0%
!! GAACCAGGAGGCATTCCATT+AGG - chr7_1:1467661-1467680 None:intergenic 50.0%
TTACCTGGCATGTTGGAACC+AGG - chr7_1:1467676-1467695 None:intergenic 50.0%
AATAACATGATGCGTCCCGG+TGG + chr7_1:1467703-1467722 Msa1004110:CDS 50.0%
TGGCTGTTGAGCATAACCAC+CGG - chr7_1:1467722-1467741 None:intergenic 50.0%
TCAGCGTTGTGTACCAGTGA+CGG + chr7_1:1468014-1468033 Msa1004110:three_prime_UTR 50.0%
!! CAGTTTGGGCCTTTTGGTGC+TGG + chr7_1:1461394-1461413 Msa1004110:five_prime_UTR 55.0%
AGTGTTCCATGAGGACCCCA+TGG - chr7_1:1461869-1461888 None:intergenic 55.0%
AGATCGTTATGCGAGCAGGG+AGG + chr7_1:1463025-1463044 Msa1004110:CDS 55.0%
GAGGAACGTTACGGTAGGGA+CGG + chr7_1:1463146-1463165 Msa1004110:CDS 55.0%
ACGATGGCCAACACTCGTCT+CGG + chr7_1:1463264-1463283 Msa1004110:CDS 55.0%
GGCTTTACCGAGACGAGTGT+TGG - chr7_1:1463274-1463293 None:intergenic 55.0%
TTACCTCCGCCTCCACAGAT+AGG + chr7_1:1463944-1463963 Msa1004110:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr7_1:1464111-1464130 Msa1004110:intron 55.0%
TCGGCAGAATCTGCTCCAAG+AGG + chr7_1:1465105-1465124 Msa1004110:CDS 55.0%
GACCTGATGTAGGACCACGT+GGG - chr7_1:1465296-1465315 None:intergenic 55.0%
AGACCTGATGTAGGACCACG+TGG - chr7_1:1465297-1465316 None:intergenic 55.0%
GCCAAGATCCAACTCCCCAA+AGG - chr7_1:1465466-1465485 None:intergenic 55.0%
GGGAGTTGGATCTTGGCACT+TGG + chr7_1:1465469-1465488 Msa1004110:intron 55.0%
CTGGGAGCAGATGCAGAGTA+TGG - chr7_1:1466287-1466306 None:intergenic 55.0%
CCACTTGGAAGGGTTTGTGC+AGG - chr7_1:1466542-1466561 None:intergenic 55.0%
CCTGCACAAACCCTTCCAAG+TGG + chr7_1:1466539-1466558 Msa1004110:CDS 55.0%
GGGTTGCTGTGCATATGGAC+TGG - chr7_1:1466618-1466637 None:intergenic 55.0%
CCAGTAGATGACGAGAACCC+AGG - chr7_1:1466671-1466690 None:intergenic 55.0%
CCTGGGTTCTCGTCATCTAC+TGG + chr7_1:1466668-1466687 Msa1004110:CDS 55.0%
CCGCCTTGAGAAGCAAAAGG+TGG - chr7_1:1466707-1466726 None:intergenic 55.0%
ACAAGCGGTCATACCTACGG+TGG + chr7_1:1466743-1466762 Msa1004110:CDS 55.0%
! CAGGGAGTACAATCCACCGT+AGG - chr7_1:1466759-1466778 None:intergenic 55.0%
!! CTACGGTGGATTGTACTCCC+TGG + chr7_1:1466757-1466776 Msa1004110:CDS 55.0%
CAGTGGGAACTACTTGCCAC+AGG + chr7_1:1466850-1466869 Msa1004110:CDS 55.0%
TTGCCACAGGGATCCTCAAC+AGG + chr7_1:1466863-1466882 Msa1004110:CDS 55.0%
AAGCCTGTTGAGGATCCCTG+TGG - chr7_1:1466869-1466888 None:intergenic 55.0%
! GGTTGTGCTGTTGGAGCTTG+GGG - chr7_1:1466908-1466927 None:intergenic 55.0%
! CGGTTGTGCTGTTGGAGCTT+GGG - chr7_1:1466909-1466928 None:intergenic 55.0%
CCAAGCTCCAACAGCACAAC+CGG + chr7_1:1466907-1466926 Msa1004110:CDS 55.0%
CATTGGGAGCAGGCACTTGA+TGG - chr7_1:1467066-1467085 None:intergenic 55.0%
!! TACGGTGAAGCATTGGGAGC+AGG - chr7_1:1467076-1467095 None:intergenic 55.0%
! GATGGGTTCTGGTATGGGCA+TGG + chr7_1:1467507-1467526 Msa1004110:CDS 55.0%
ATGGGAATGGGCAATGCTCC+CGG + chr7_1:1467532-1467551 Msa1004110:CDS 55.0%
ACCTCCCATACCCATACCAC+CGG - chr7_1:1467554-1467573 None:intergenic 55.0%
ATGGGTATGGGAGGTTACGG+AGG + chr7_1:1467559-1467578 Msa1004110:CDS 55.0%
! GGAGGAGGCATGACATCCAT+GGG + chr7_1:1467577-1467596 Msa1004110:CDS 55.0%
TCCATGGGTATGGGTATGGG+TGG + chr7_1:1467592-1467611 Msa1004110:CDS 55.0%
ACCACCCATACCCATACCCA+TGG - chr7_1:1467596-1467615 None:intergenic 55.0%
GGGTATGGGTATGGGTGGTA+TGG + chr7_1:1467597-1467616 Msa1004110:CDS 55.0%
ATGGGTATGGGTGGTATGGG+GGG + chr7_1:1467601-1467620 Msa1004110:CDS 55.0%
!! CCAGGAGGCATTCCATTAGG+AGG - chr7_1:1467658-1467677 None:intergenic 55.0%
CCTCCTAATGGAATGCCTCC+TGG + chr7_1:1467655-1467674 Msa1004110:CDS 55.0%
GGCTGTTGAGCATAACCACC+GGG - chr7_1:1467721-1467740 None:intergenic 55.0%
CAGCGTTGTGTACCAGTGAC+GGG + chr7_1:1468015-1468034 Msa1004110:three_prime_UTR 55.0%
CAGCACGAGCCAGCACCAAA+AGG - chr7_1:1461406-1461425 None:intergenic 60.0%
ACTCAAGGGGGGCCTATCTG+TGG - chr7_1:1463959-1463978 None:intergenic 60.0%
GCCCCCCTTGAGTAAACCAC+TGG + chr7_1:1463966-1463985 Msa1004110:intron 60.0%
TGGATGCCGACCCCACTTAG+TGG + chr7_1:1464104-1464123 Msa1004110:intron 60.0%
GGATGCCGACCCCACTTAGT+GGG + chr7_1:1464105-1464124 Msa1004110:intron 60.0%
CTCAGAGCCCTGTGCCTGAA+AGG + chr7_1:1464995-1465014 Msa1004110:CDS 60.0%
GACCCACGTGGTCCTACATC+AGG + chr7_1:1465291-1465310 Msa1004110:CDS 60.0%
!! CCTGATGTAGCGGGCACAAG+AGG - chr7_1:1465651-1465670 None:intergenic 60.0%
CCTCTTGTGCCCGCTACATC+AGG + chr7_1:1465648-1465667 Msa1004110:CDS 60.0%
TCTGGTCAACCTGGCATGCC+TGG + chr7_1:1466650-1466669 Msa1004110:CDS 60.0%
CTGGTCAACCTGGCATGCCT+GGG + chr7_1:1466651-1466670 Msa1004110:CDS 60.0%
! CCGGTTGTGCTGTTGGAGCT+TGG - chr7_1:1466910-1466929 None:intergenic 60.0%
GGTTCAGGCATAGGTCGTGC+TGG + chr7_1:1467451-1467470 Msa1004110:CDS 60.0%
GGCAATGCTCCCGGTGGTAT+GGG + chr7_1:1467541-1467560 Msa1004110:CDS 60.0%
TGCTCCCGGTGGTATGGGTA+TGG + chr7_1:1467546-1467565 Msa1004110:CDS 60.0%
GCTCCCGGTGGTATGGGTAT+GGG + chr7_1:1467547-1467566 Msa1004110:CDS 60.0%
CCTCCCATACCCATACCACC+GGG - chr7_1:1467553-1467572 None:intergenic 60.0%
GGTATGGGAGGTTACGGAGG+AGG + chr7_1:1467562-1467581 Msa1004110:CDS 60.0%
! CGGAGGAGGCATGACATCCA+TGG + chr7_1:1467576-1467595 Msa1004110:CDS 60.0%
TGGGTATGGGTGGTATGGGG+GGG + chr7_1:1467602-1467621 Msa1004110:CDS 60.0%
ATGGGTGGTATGGGGGGGAT+AGG + chr7_1:1467607-1467626 Msa1004110:CDS 60.0%
TGGTATGGGGGGGATAGGCA+TGG + chr7_1:1467612-1467631 Msa1004110:CDS 60.0%
GGTATGGGGGGGATAGGCAT+GGG + chr7_1:1467613-1467632 Msa1004110:CDS 60.0%
GTATGGGGGGGATAGGCATG+GGG + chr7_1:1467614-1467633 Msa1004110:CDS 60.0%
CCTGGCATGTTGGAACCAGG+AGG - chr7_1:1467673-1467692 None:intergenic 60.0%
CCTCCTGGTTCCAACATGCC+AGG + chr7_1:1467670-1467689 Msa1004110:CDS 60.0%
CAAGGGGGGCCTATCTGTGG+AGG - chr7_1:1463956-1463975 None:intergenic 65.0%
GCATGAGGGGACGAGCCTCT+TGG - chr7_1:1465123-1465142 None:intergenic 65.0%
GACGAGAACCCAGGCATGCC+AGG - chr7_1:1466662-1466681 None:intergenic 65.0%
! GGCATAGGTCGTGCTGGTGC+TGG + chr7_1:1467457-1467476 Msa1004110:CDS 65.0%
GGAATGGGCAATGCTCCCGG+TGG + chr7_1:1467535-1467554 Msa1004110:CDS 65.0%
GGGCAATGCTCCCGGTGGTA+TGG + chr7_1:1467540-1467559 Msa1004110:CDS 65.0%
CCCGGTGGTATGGGTATGGG+AGG + chr7_1:1467550-1467569 Msa1004110:CDS 65.0%
GGGCCTATCTGTGGAGGCGG+AGG - chr7_1:1463950-1463969 None:intergenic 70.0%
GGGGGGCCTATCTGTGGAGG+CGG - chr7_1:1463953-1463972 None:intergenic 70.0%
GGGGGGATAGGCATGGGGCA+AGG + chr7_1:1467619-1467638 Msa1004110:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 1461161 1468141 1461161 ID=Msa1004110;Name=Msa1004110
chr7_1 mRNA 1461161 1468141 1461161 ID=Msa1004110-mRNA-1;Parent=Msa1004110;Name=Msa1004110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=281|0.91|0.92|1|0.91|0.92|13|382|949
chr7_1 exon 1461161 1461476 1461161 ID=Msa1004110-mRNA-1:exon:582;Parent=Msa1004110-mRNA-1
chr7_1 exon 1461628 1461679 1461628 ID=Msa1004110-mRNA-1:exon:583;Parent=Msa1004110-mRNA-1
chr7_1 exon 1461842 1461921 1461842 ID=Msa1004110-mRNA-1:exon:584;Parent=Msa1004110-mRNA-1
chr7_1 exon 1461995 1462073 1461995 ID=Msa1004110-mRNA-1:exon:585;Parent=Msa1004110-mRNA-1
chr7_1 exon 1462205 1462288 1462205 ID=Msa1004110-mRNA-1:exon:586;Parent=Msa1004110-mRNA-1
chr7_1 exon 1462425 1462570 1462425 ID=Msa1004110-mRNA-1:exon:587;Parent=Msa1004110-mRNA-1
chr7_1 exon 1462977 1463285 1462977 ID=Msa1004110-mRNA-1:exon:588;Parent=Msa1004110-mRNA-1
chr7_1 exon 1464718 1464759 1464718 ID=Msa1004110-mRNA-1:exon:589;Parent=Msa1004110-mRNA-1
chr7_1 exon 1464927 1465016 1464927 ID=Msa1004110-mRNA-1:exon:590;Parent=Msa1004110-mRNA-1
chr7_1 exon 1465092 1465312 1465092 ID=Msa1004110-mRNA-1:exon:591;Parent=Msa1004110-mRNA-1
chr7_1 exon 1465571 1465749 1465571 ID=Msa1004110-mRNA-1:exon:592;Parent=Msa1004110-mRNA-1
chr7_1 exon 1466122 1467217 1466122 ID=Msa1004110-mRNA-1:exon:593;Parent=Msa1004110-mRNA-1
chr7_1 exon 1467323 1468141 1467323 ID=Msa1004110-mRNA-1:exon:594;Parent=Msa1004110-mRNA-1
chr7_1 five_prime_UTR 1461161 1461441 1461161 ID=Msa1004110-mRNA-1:five_prime_utr;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1461442 1461476 1461442 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1461628 1461679 1461628 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1461842 1461921 1461842 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1461995 1462073 1461995 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1462205 1462288 1462205 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1462425 1462570 1462425 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1462977 1463285 1462977 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1464718 1464759 1464718 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1464927 1465016 1464927 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1465092 1465312 1465092 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1465571 1465749 1465571 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1466122 1467217 1466122 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 CDS 1467323 1467759 1467323 ID=Msa1004110-mRNA-1:cds;Parent=Msa1004110-mRNA-1
chr7_1 three_prime_UTR 1467760 1468141 1467760 ID=Msa1004110-mRNA-1:three_prime_utr;Parent=Msa1004110-mRNA-1
Gene Sequence

>Msa1004110

ATGAAGAAGGTTTTTGGTCAAACTGTTAGGGACCTTAAAAGAGAAGTGAACAAGAAAGTGCTCAAAGTTCCTGGCATTGAACAGAAGGTTCTTGATGCTACTAGCAATGAACCATGGGGTCCTCATGGAACACTGCTTGCAGACATTGCTCAGGCAACTAGAAACCCTCATGAATACCAGATGATCATGTCAGTAGTCTGGAAACGAATTAACGACACTGGCAAGAATTGGCGGCATGTCTACAAGGCTTTGACAGTACTTGAGTACTTGGTGGCTCATGGTTCTGAGAGAGTCATAGATGAGATCAAAGAACATTCTTATCAAATATCGACTTTGTCCGACTTTCAATATATTGATTCCAGTGGAAGAGATCAAGGAAACAATGTTAGGAAAAAATCTCAGAATCTCGTTGTCCTTGTGAATGATAAAGAAAGAATCGTAGAGGTTAGGCAGAAGGCTGCTGTTAATAGGGAAAAACCTGGTTCACACTCAAGCATTGGAAGCTATGGTGATCGATATGAAGAAGATCGTTATGCGAGCAGGGAGGAAGATAGAAATGGCTATGGTTATGGAAGAGAAAGAGAAATGGGCTCTAGAGATGATGATCGGTACAATCGCGATGGAGATCGTTATGGTAGAGATTATGAGGAACGTTACGGTAGGGACGGTTACAGAGATGATGATAGGGGAAGAAGTCGAAGTGTTGACTACAATTATGATGATACAAGGAGCAGGAATTCTGATAGAGATCGTGATTTCGATGACGATGGCCAACACTCGTCTCGAGGTAGCAATGCTAAAGTTGAAGACCAATCACTGGAAGCAAGACTTCAGCGGAAACTTTCTGAGCAAAATTCGGGTGCTCCTCCTAGTTATGAAGAGGCTGTTGGTGAAGCTCAGAGCCCTGTGCCTGAAAGGGATGTTGAAACTTCGGCAGAATCTGCTCCAAGAGGCTCGTCCCCTCATGCAAGTGATAATCCTAGCCTAACCTCTGCTCCTACTGGATCTTCTCCTGTAAACAATAATCCAACTGAAGTAACTGCTGCTGCCAGTACATCTGTTGCTGCTAGTACTGCTGTTTCTACTCAGGAAACTGAGCCCACTGATGATTTCTTTGACCCACGTGGTCCTACATCAGCTGCTCCAACCACTTCTAATTTTGGCGAAATAGATTTGCTCGGTTCTTTATCAGACTCATTCTCTTCAAATGCTCTGCCTCTTGTGCCCGCTACATCAGGAATTTCAACCCCTGAAGCAAACACTGGTTCAACAGCTTCTTTTGCAGCACCATCCTCTGGGTCCAATAATTTCAATCAGTCTTTTGAAGATCCGTTTGGTGATTCACCATTCAAGGCTGATACTTCTGTTGAAACTGCTCCATCTCAACACCATGCACCTCAGACTACTGAACCATCCCAATCAGATGGTTTTAATGCCGACATGTCTAATTTTGGGTTTGGGGACTCATTTTCTATTGTACCATACTCTGCATCTGCTCCCAGTGACACTCAACCTTTCTCTGCTAACTCCCAGTTTTTGTCCCAAGATTCGGAAACTGATATTCTAGCTGACATTCTTCCTCCTGCACCATTACCTGAGATGACATCACAGCAGAACAGTTCAGCTCCTACTTTTGGCCAACCTTCACCTTCCTTTTCAACTTCATCTGGACCATTTTCTGAACCAACTGGTCAACTTACTCCTCATCAAGGTTTCTCAGCTGCAACCAATCAACCTGCACAAACCCTTCCAAGTGGTCAATTTTCCCAGCCAGGCTTTTCAGCTTCTAGTTCATCTTTTTCAGCCTCTACCAGTCCATATGCACAGCAACCCTTTCCTTCTCATTCTGGTCAACCTGGCATGCCTGGGTTCTCGTCATCTACTGGCCATTCTATGCAGCCACCTTTTGCTTCTCAAGGCGGTCAATCTACTGCACAAACAAGCGGTCATACCTACGGTGGATTGTACTCCCTGGATACATCTCTTACTCCAGGAGCTCAAAACATGTATTCTCAATCACAAAATGGATATAATGGATCTATGAACAGTGGGAACTACTTGCCACAGGGATCCTCAACAGGCTTTCCTTCACAAATGACTCCCCAAGCTCCAACAGCACAACCGGCACAAATCACAAACTTTCCCCATCATGGAGGATCTACTGCTTCTCCCTCTCCAACTGATCAAGCATCACAGTTCAACAACCAGAGCTTCTTTGGACAACAAGGGAATGCAGCTCCCTTTAGCTCATCATATACCCATCAAGTGCCTGCTCCCAATGCTTCACCGTATGCTATTTCAGCGGCACCAAATTCTTTAGTTTCTCAACCATCCAAAGATAAGTTTGAAACAAAATCAACAGTTTGGGCAGACACATTAAGCAGGGGACTGGTTAATTTAAACATATCTGGACCTAAAACTAATCCGTTAGCAGATATTGGCATTGACTTCGAATCCATTAATAGGAAGGAAAAGAGAATGGAGAAGCCCACTAACACACCTGTAACATCAACTGTAAATATGGGTAAAGCTATGGGATCAGGTTCAGGCATAGGTCGTGCTGGTGCTGGTGCTCTTAGACCTAATCCAAATTCGATGATGGGTTCTGGTATGGGCATGGGTATGGGAATGGGCAATGCTCCCGGTGGTATGGGTATGGGAGGTTACGGAGGAGGCATGACATCCATGGGTATGGGTATGGGTGGTATGGGGGGGATAGGCATGGGGCAAGGATACCAGATGCAACCTCCTAATGGAATGCCTCCTGGTTCCAACATGCCAGGTAACTATAATAATAACATGATGCGTCCCGGTGGTTATGCTCAACAGCCATATGGTGGATACCGATGA
Protein sequence

>Msa1004110

MKKVFGQTVRDLKREVNKKVLKVPGIEQKVLDATSNEPWGPHGTLLADIAQATRNPHEYQMIMSVVWKRINDTGKNWRHVYKALTVLEYLVAHGSERVIDEIKEHSYQISTLSDFQYIDSSGRDQGNNVRKKSQNLVVLVNDKERIVEVRQKAAVNREKPGSHSSIGSYGDRYEEDRYASREEDRNGYGYGREREMGSRDDDRYNRDGDRYGRDYEERYGRDGYRDDDRGRSRSVDYNYDDTRSRNSDRDRDFDDDGQHSSRGSNAKVEDQSLEARLQRKLSEQNSGAPPSYEEAVGEAQSPVPERDVETSAESAPRGSSPHASDNPSLTSAPTGSSPVNNNPTEVTAAASTSVAASTAVSTQETEPTDDFFDPRGPTSAAPTTSNFGEIDLLGSLSDSFSSNALPLVPATSGISTPEANTGSTASFAAPSSGSNNFNQSFEDPFGDSPFKADTSVETAPSQHHAPQTTEPSQSDGFNADMSNFGFGDSFSIVPYSASAPSDTQPFSANSQFLSQDSETDILADILPPAPLPEMTSQQNSSAPTFGQPSPSFSTSSGPFSEPTGQLTPHQGFSAATNQPAQTLPSGQFSQPGFSASSSSFSASTSPYAQQPFPSHSGQPGMPGFSSSTGHSMQPPFASQGGQSTAQTSGHTYGGLYSLDTSLTPGAQNMYSQSQNGYNGSMNSGNYLPQGSSTGFPSQMTPQAPTAQPAQITNFPHHGGSTASPSPTDQASQFNNQSFFGQQGNAAPFSSSYTHQVPAPNASPYAISAAPNSLVSQPSKDKFETKSTVWADTLSRGLVNLNISGPKTNPLADIGIDFESINRKEKRMEKPTNTPVTSTVNMGKAMGSGSGIGRAGAGALRPNPNSMMGSGMGMGMGMGNAPGGMGMGGYGGGMTSMGMGMGGMGGIGMGQGYQMQPPNGMPPGSNMPGNYNNNMMRPGGYAQQPYGGYR*