Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618020 | XP_003629745.1 | 95.349 | 301 | 3 | 1 | 1 | 290 | 1 | 301 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618020 | sp|Q9C5M0|DTC_ARATH | 80.399 | 301 | 45 | 3 | 1 | 290 | 1 | 298 | 2.09e-178 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0075740 | Msa0618020 | -0.809739 | 1.630520e-50 | -8.615850e-47 |
| Msa0075750 | Msa0618020 | -0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0093950 | Msa0618020 | 0.817719 | 2.850373e-52 | -8.615850e-47 |
| Msa0108490 | Msa0618020 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa0606640 | Msa0618020 | 0.803273 | 3.771721e-49 | -8.615850e-47 |
| Msa0617690 | Msa0618020 | 0.820055 | 8.394776e-53 | -8.615850e-47 |
| Msa0618020 | Msa0652270 | 0.843138 | 1.684274e-58 | -8.615850e-47 |
| Msa0618020 | Msa0653540 | -0.810258 | 1.260592e-50 | -8.615850e-47 |
| Msa0618020 | Msa0657060 | 0.985669 | 2.734724e-164 | -8.615850e-47 |
| Msa0618020 | Msa0686860 | 0.802442 | 5.600561e-49 | -8.615850e-47 |
| Msa0618020 | Msa0694810 | 0.805307 | 1.422092e-49 | -8.615850e-47 |
| Msa0618020 | Msa0701040 | 0.982423 | 4.706585e-155 | -8.615850e-47 |
| Msa0618020 | Msa0713900 | 0.822680 | 2.081194e-53 | -8.615850e-47 |
| Msa0618020 | Msa0756160 | 0.836847 | 7.359202e-57 | -8.615850e-47 |
| Msa0618020 | Msa0835180 | 0.809672 | 1.685293e-50 | -8.615850e-47 |
| Msa0618020 | Msa0931410 | 0.807455 | 5.011628e-50 | -8.615850e-47 |
| Msa0618020 | Msa1035850 | -0.826278 | 2.962304e-54 | -8.615850e-47 |
| Msa0618020 | Msa1044520 | 0.820823 | 5.594282e-53 | -8.615850e-47 |
| Msa0618020 | Msa1049030 | 0.805141 | 1.540773e-49 | -8.615850e-47 |
| Msa0618020 | Msa1087400 | 0.805050 | 1.609579e-49 | -8.615850e-47 |
| Msa0618020 | Msa1221780 | 0.829830 | 4.133429e-55 | -8.615850e-47 |
| Msa0618020 | Msa1264300 | 0.809717 | 1.647894e-50 | -8.615850e-47 |
| Msa0618020 | Msa1333900 | 0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0618020 | Msa1334350 | 0.808954 | 2.402363e-50 | -8.615850e-47 |
| Msa0618020 | Msa1402340 | 0.808832 | 2.551376e-50 | -8.615850e-47 |
| Msa0618020 | Msa1455330 | -0.802402 | 5.706948e-49 | -8.615850e-47 |
| Msa0178840 | Msa0618020 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0235970 | Msa0618020 | 0.863917 | 1.767520e-64 | -8.615850e-47 |
| Msa0374300 | Msa0618020 | 0.831784 | 1.371380e-55 | -8.615850e-47 |
| Msa0424940 | Msa0618020 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0469700 | Msa0618020 | 0.810853 | 9.373069e-51 | -8.615850e-47 |
| Msa0244410 | Msa0618020 | -0.818875 | 1.560025e-52 | -8.615850e-47 |
| Msa0321140 | Msa0618020 | -0.830893 | 2.272489e-55 | -8.615850e-47 |
| Msa0548650 | Msa0618020 | 0.812739 | 3.643441e-51 | -8.615850e-47 |
| Msa0556690 | Msa0618020 | 0.822524 | 2.262723e-53 | -8.615850e-47 |
| Msa0564920 | Msa0618020 | 0.949923 | 4.747845e-108 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618020 | MtrunA17_Chr8g0378951 | 95.349 | 301 | 3 | 1 | 1 | 290 | 1 | 301 | 0.0 | 580 |
| Msa0618020 | MtrunA17_Chr5g0412401 | 36.420 | 324 | 149 | 5 | 18 | 288 | 3 | 322 | 4.64e-56 | 183 |
| Msa0618020 | MtrunA17_Chr3g0133111 | 35.535 | 318 | 151 | 7 | 18 | 288 | 3 | 313 | 9.71e-53 | 174 |
| Msa0618020 | MtrunA17_Chr8g0367641 | 37.188 | 320 | 145 | 7 | 18 | 288 | 3 | 315 | 4.40e-52 | 173 |
| Msa0618020 | MtrunA17_Chr1g0196921 | 32.143 | 280 | 165 | 7 | 27 | 284 | 20 | 296 | 1.22e-34 | 127 |
| Msa0618020 | MtrunA17_Chr7g0241521 | 31.667 | 300 | 159 | 8 | 21 | 286 | 13 | 300 | 1.64e-34 | 127 |
| Msa0618020 | MtrunA17_Chr4g0008061 | 31.438 | 299 | 170 | 7 | 14 | 287 | 11 | 299 | 6.67e-34 | 125 |
| Msa0618020 | MtrunA17_Chr8g0379131 | 63.014 | 73 | 27 | 0 | 201 | 273 | 28 | 100 | 1.76e-26 | 100 |
| Msa0618020 | MtrunA17_Chr8g0378971 | 72.131 | 61 | 17 | 0 | 223 | 283 | 3 | 63 | 6.83e-26 | 97.4 |
| Msa0618020 | MtrunA17_Chr3g0103681 | 26.978 | 278 | 169 | 5 | 33 | 284 | 28 | 297 | 5.38e-19 | 85.1 |
| Msa0618020 | MtrunA17_Chr4g0004571 | 26.820 | 261 | 165 | 8 | 14 | 252 | 3 | 259 | 4.19e-18 | 82.8 |
| Msa0618020 | MtrunA17_Chr4g0028531 | 25.926 | 297 | 191 | 12 | 17 | 288 | 15 | 307 | 9.79e-15 | 73.2 |
| Msa0618020 | MtrunA17_Chr7g0252401 | 25.806 | 279 | 183 | 8 | 21 | 283 | 207 | 477 | 2.16e-13 | 70.1 |
| Msa0618020 | MtrunA17_Chr3g0131501 | 23.929 | 280 | 194 | 8 | 19 | 283 | 203 | 478 | 2.16e-12 | 67.0 |
| Msa0618020 | MtrunA17_Chr1g0196161 | 26.437 | 174 | 119 | 5 | 118 | 284 | 3 | 174 | 2.16e-12 | 64.3 |
| Msa0618020 | MtrunA17_Chr6g0463351 | 30.328 | 122 | 84 | 1 | 20 | 140 | 159 | 280 | 5.32e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618020 | AT5G19760.1 | 80.399 | 301 | 45 | 3 | 1 | 290 | 1 | 298 | 2.12e-179 | 496 |
| Msa0618020 | AT4G24570.1 | 37.304 | 319 | 144 | 8 | 18 | 288 | 3 | 313 | 1.20e-55 | 182 |
| Msa0618020 | AT2G22500.1 | 36.709 | 316 | 148 | 8 | 18 | 288 | 3 | 311 | 5.49e-49 | 165 |
| Msa0618020 | AT5G09470.1 | 35.766 | 274 | 151 | 6 | 33 | 287 | 67 | 334 | 1.27e-40 | 144 |
| Msa0618020 | AT1G14140.1 | 33.333 | 294 | 166 | 8 | 16 | 284 | 11 | 299 | 1.60e-34 | 127 |
| Msa0618020 | AT5G58970.1 | 29.966 | 297 | 166 | 6 | 18 | 284 | 13 | 297 | 3.16e-34 | 126 |
| Msa0618020 | AT3G54110.1 | 32.971 | 276 | 154 | 7 | 32 | 283 | 27 | 295 | 2.18e-33 | 124 |
| Msa0618020 | AT4G03115.1 | 29.730 | 296 | 191 | 11 | 2 | 284 | 17 | 308 | 1.32e-27 | 109 |
| Msa0618020 | AT4G03115.3 | 29.730 | 296 | 191 | 11 | 2 | 284 | 49 | 340 | 2.26e-27 | 109 |
| Msa0618020 | AT5G58970.2 | 29.876 | 241 | 134 | 5 | 18 | 228 | 13 | 248 | 1.26e-25 | 102 |
| Msa0618020 | AT4G03115.5 | 28.696 | 230 | 156 | 7 | 59 | 284 | 12 | 237 | 6.75e-21 | 89.7 |
| Msa0618020 | AT4G03115.6 | 28.696 | 230 | 156 | 7 | 59 | 284 | 20 | 245 | 8.07e-21 | 89.7 |
| Msa0618020 | AT5G01340.1 | 26.502 | 283 | 186 | 8 | 22 | 284 | 18 | 298 | 1.04e-16 | 79.3 |
| Msa0618020 | AT4G03115.2 | 31.553 | 206 | 126 | 9 | 2 | 195 | 17 | 219 | 1.79e-15 | 74.3 |
| Msa0618020 | AT4G03115.4 | 31.553 | 206 | 126 | 9 | 2 | 195 | 17 | 219 | 2.07e-15 | 74.3 |
| Msa0618020 | AT1G79900.1 | 27.848 | 237 | 148 | 8 | 37 | 260 | 32 | 258 | 5.46e-11 | 62.4 |
Find 103 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTGTTGCTGCTGGTTTC+TGG | 0.111154 | 4_2:+68732348 | Msa0618020:CDS |
| CCTCAACCAGCTCCAGAAAT+TGG | 0.196597 | 4_2:+68736713 | Msa0618020:CDS |
| TTGATATCCAATTTCCAAAA+AGG | 0.198633 | 4_2:-68736827 | None:intergenic |
| GGAGAAAAGTTATGGGTTAT+AGG | 0.255079 | 4_2:+68736734 | Msa0618020:CDS |
| TTCGTCAATGGTGGTGCTTC+TGG | 0.275917 | 4_2:+68732386 | Msa0618020:CDS |
| TTAGGTGCAAGTAGTGTATC+TGG | 0.278521 | 4_2:+68736369 | Msa0618020:intron |
| CAGAAATTGGAGAAAAGTTA+TGG | 0.301655 | 4_2:+68736726 | Msa0618020:CDS |
| TTCTTGCAGGGTCTATCAGC+TGG | 0.316238 | 4_2:+68732943 | Msa0618020:intron |
| AGTTGGTAGTCCAGCTGATT+TGG | 0.324876 | 4_2:+68733410 | Msa0618020:CDS |
| GGGCTGACTGCTGGTGCAAT+TGG | 0.358637 | 4_2:+68733381 | Msa0618020:CDS |
| AAACTACACAAACGCCTTCC+AGG | 0.363434 | 4_2:+68733482 | Msa0618020:CDS |
| GGGTGTTGGTGCTTTCTATA+AGG | 0.363669 | 4_2:+68732623 | Msa0618020:CDS |
| CTGCACGCCTTGGAACATTT+AGG | 0.364412 | 4_2:+68732992 | Msa0618020:CDS |
| TGGCAGGGGCTTGCCATCAT+TGG | 0.380343 | 4_2:-68733337 | None:intergenic |
| GGAAGGCGTTTGTGTAGTTT+CGG | 0.380503 | 4_2:-68733479 | None:intergenic |
| CCAATTTCTGGAGCTGGTTG+AGG | 0.389193 | 4_2:-68736713 | None:intergenic |
| TTCTTCTCGTCTCCCATTGT+TGG | 0.393560 | 4_2:-68732320 | None:intergenic |
| AATTCAGGTTAGGATTCAAC+TGG | 0.396885 | 4_2:+68732554 | Msa0618020:intron |
| TAATTTGTTGGCTGTGTTGT+AGG | 0.400868 | 4_2:+68736803 | Msa0618020:three_prime_UTR |
| GAAGGGTCCTCCAGATTTGA+AGG | 0.417928 | 4_2:-68736511 | None:intergenic |
| TTGAGCATTGAATAATTTGT+TGG | 0.423699 | 4_2:+68736791 | Msa0618020:three_prime_UTR |
| AGAAATTGGAGAAAAGTTAT+GGG | 0.426080 | 4_2:+68736727 | Msa0618020:CDS |
| ACCATTGACGAAAGGCTTGA+TGG | 0.428395 | 4_2:-68732375 | None:intergenic |
| GCTGTCAAGACCTTCAAATC+TGG | 0.432966 | 4_2:+68736501 | Msa0618020:CDS |
| CAGTCAAGAGAGCCGGTGTA+TGG | 0.437255 | 4_2:-68736477 | None:intergenic |
| GGCCAGAAACCAGCAGCAAC+AGG | 0.443267 | 4_2:-68732350 | None:intergenic |
| CATACCTTGATCATATCAAT+AGG | 0.451587 | 4_2:-68732434 | None:intergenic |
| TGAGTCTTCACATAATCAAA+TGG | 0.453835 | 4_2:-68736417 | None:intergenic |
| ACCATCAAGCCTTTCGTCAA+TGG | 0.457555 | 4_2:+68732374 | Msa0618020:CDS |
| CACCGATACGGTAAAGTGCC+TGG | 0.473291 | 4_2:-68733500 | None:intergenic |
| TCAAAGTGTTGAGTTCTTCA+AGG | 0.476440 | 4_2:+68733614 | Msa0618020:CDS |
| TTCAAGGATACCGTTGGTCT+AGG | 0.476717 | 4_2:+68733630 | Msa0618020:CDS |
| GTCTATCAGCTGGGTTACTC+AGG | 0.478134 | 4_2:+68732953 | Msa0618020:CDS |
| GATTCCCTGTCTACTGTGTC+AGG | 0.479793 | 4_2:+68736547 | Msa0618020:CDS |
| TTTCACTGTGGAAAGGTGCT+GGG | 0.480851 | 4_2:+68733538 | Msa0618020:intron |
| TCAACCTATTGATATGATCA+AGG | 0.487786 | 4_2:+68732430 | Msa0618020:CDS |
| AAGCCTAAGCCTGTTGCTGC+TGG | 0.491227 | 4_2:+68732341 | Msa0618020:CDS |
| AAACAAGGAAAACAATGAAA+AGG | 0.495989 | 4_2:-68732098 | None:intergenic |
| TTCTACCATGCTTAAGAATG+AGG | 0.497892 | 4_2:+68732602 | Msa0618020:CDS |
| CTTGACAAATAAAGCAATTG+AGG | 0.499499 | 4_2:+68733314 | Msa0618020:CDS |
| ACTTACACCACTGCACGCCT+TGG | 0.499902 | 4_2:+68732982 | Msa0618020:CDS |
| TTTGGCACTCATTCGTATGC+AGG | 0.500271 | 4_2:+68733428 | Msa0618020:CDS |
| GACACAGTAGACAGGGAATC+CGG | 0.501193 | 4_2:-68736544 | None:intergenic |
| AAGAGCCATGGCATTGAACA+TGG | 0.503929 | 4_2:+68733572 | Msa0618020:CDS |
| GAATCCGGTGTAAAATTTGA+AGG | 0.507310 | 4_2:-68736529 | None:intergenic |
| GCAATCCTGACACAGTAGAC+AGG | 0.508794 | 4_2:-68736552 | None:intergenic |
| ATCAGCTGGGTTACTCAGGC+AGG | 0.514032 | 4_2:+68732957 | Msa0618020:CDS |
| GCTCTATGTGGGCTGACTGC+TGG | 0.520808 | 4_2:+68733372 | Msa0618020:CDS |
| CGAATGAGTGCCAAATCAGC+TGG | 0.523817 | 4_2:-68733420 | None:intergenic |
| ATTAGTCATGCAATTCAAGC+GGG | 0.524365 | 4_2:+68736879 | Msa0618020:three_prime_UTR |
| AAAGCAATTGAGGCCAATGA+TGG | 0.524756 | 4_2:+68733324 | Msa0618020:CDS |
| TTCCAGGCACTTTACCGTAT+CGG | 0.534625 | 4_2:+68733498 | Msa0618020:CDS |
| ACTTCGCTAATACCAACAAT+GGG | 0.536551 | 4_2:+68732308 | Msa0618020:exon |
| TCTTGCAGGGTCTATCAGCT+GGG | 0.537823 | 4_2:+68732944 | Msa0618020:intron |
| CAGGATTGCTCCCCATGTCA+TGG | 0.543518 | 4_2:+68736566 | Msa0618020:CDS |
| TCCCTTCATCTGCACCGATA+CGG | 0.543890 | 4_2:-68733512 | None:intergenic |
| AAGTTATGGGTTATAGGTGA+TGG | 0.547875 | 4_2:+68736740 | Msa0618020:exon |
| AAACCAGCAGCAACAGGCTT+AGG | 0.550180 | 4_2:-68732344 | None:intergenic |
| TTGACGAAAGGCTTGATGGT+TGG | 0.552826 | 4_2:-68732371 | None:intergenic |
| AACTTCGCTAATACCAACAA+TGG | 0.553022 | 4_2:+68732307 | Msa0618020:exon |
| CATCCCCATGTTCAATGCCA+TGG | 0.555090 | 4_2:-68733577 | None:intergenic |
| ACTGCTTATGGCAGATGACA+TGG | 0.559975 | 4_2:+68736685 | Msa0618020:intron |
| GTTAGGATTCAACTGGGTCA+AGG | 0.566704 | 4_2:+68732561 | Msa0618020:CDS |
| GAGTTCTTCAAGGATACCGT+TGG | 0.572249 | 4_2:+68733624 | Msa0618020:CDS |
| GACAGCACAGTCAAGAGAGC+CGG | 0.574269 | 4_2:-68736484 | None:intergenic |
| TCTTCTTAACCCAACAAACA+AGG | 0.579884 | 4_2:-68732113 | None:intergenic |
| AAAGATGCAACCTGATGCTG+AGG | 0.582204 | 4_2:+68736446 | Msa0618020:CDS |
| TAGTTTCGGCGCTGAGCAAG+AGG | 0.584237 | 4_2:-68733465 | None:intergenic |
| TATGATATGATATGATGCGT+TGG | 0.588193 | 4_2:+68736942 | Msa0618020:three_prime_UTR |
| ATCAATAGGTTGAATAACAC+AGG | 0.588855 | 4_2:-68732420 | None:intergenic |
| GAAATGAAGCGAAGAAAACG+AGG | 0.590384 | 4_2:-68732277 | None:intergenic |
| AACACCCTCATTCTTAAGCA+TGG | 0.601421 | 4_2:-68732607 | None:intergenic |
| GTCAAGACCTTCAAATCTGG+AGG | 0.605904 | 4_2:+68736504 | Msa0618020:CDS |
| AAGAGAATAGTACCATGACA+TGG | 0.606457 | 4_2:-68736578 | None:intergenic |
| AGAGCCATGGCATTGAACAT+GGG | 0.610100 | 4_2:+68733573 | Msa0618020:CDS |
| AAATGTTCCAAGGCGTGCAG+TGG | 0.610327 | 4_2:-68732989 | None:intergenic |
| GAGCCATGGCATTGAACATG+GGG | 0.612866 | 4_2:+68733574 | Msa0618020:CDS |
| ATCAAGCCTTTCGTCAATGG+TGG | 0.613468 | 4_2:+68732377 | Msa0618020:CDS |
| AGAGAATAGTACCATGACAT+GGG | 0.614065 | 4_2:-68736577 | None:intergenic |
| TCTACCATGCTTAAGAATGA+GGG | 0.614254 | 4_2:+68732603 | Msa0618020:CDS |
| AATTAGTCATGCAATTCAAG+CGG | 0.614528 | 4_2:+68736878 | Msa0618020:three_prime_UTR |
| AATCCGGTGTAAAATTTGAA+GGG | 0.616204 | 4_2:-68736528 | None:intergenic |
| CAATCCTGACACAGTAGACA+GGG | 0.622100 | 4_2:-68736551 | None:intergenic |
| ATAACATGTACAATATCTCG+TGG | 0.622110 | 4_2:+68737158 | Msa0618020:three_prime_UTR |
| CAACTCACCTAAATGTTCCA+AGG | 0.622902 | 4_2:-68732999 | None:intergenic |
| GGTGAAATGACTACTGTGGT+TGG | 0.629754 | 4_2:+68733651 | Msa0618020:CDS |
| GATACGGTAAAGTGCCTGGA+AGG | 0.630447 | 4_2:-68733496 | None:intergenic |
| GCCATGGCTCTTACTACAGT+AGG | 0.638558 | 4_2:-68733561 | None:intergenic |
| GAAGTGAAGAACGAATCTAG+TGG | 0.641926 | 4_2:-68732211 | None:intergenic |
| GCCTACTGTAGTAAGAGCCA+TGG | 0.642788 | 4_2:+68733560 | Msa0618020:CDS |
| ATGTGTCGAAAAGATGTCTG+AGG | 0.652732 | 4_2:-68737047 | None:intergenic |
| GGTGCAATTGGAGCAACAGT+TGG | 0.654003 | 4_2:+68733393 | Msa0618020:CDS |
| GAAGCACCACCATTGACGAA+AGG | 0.656464 | 4_2:-68732383 | None:intergenic |
| ATTCAGGTTAGGATTCAACT+GGG | 0.656898 | 4_2:+68732555 | Msa0618020:intron |
| GAGGGAAAATATCCATACAC+CGG | 0.660454 | 4_2:+68736465 | Msa0618020:CDS |
| AGTCATTTCACCTAGACCAA+CGG | 0.665426 | 4_2:-68733640 | None:intergenic |
| TTAGTCATGCAATTCAAGCG+GGG | 0.668074 | 4_2:+68736880 | Msa0618020:three_prime_UTR |
| ATGCTTAAGAATGAGGGTGT+TGG | 0.674370 | 4_2:+68732609 | Msa0618020:CDS |
| TAACATGTACAATATCTCGT+GGG | 0.675913 | 4_2:+68737159 | Msa0618020:three_prime_UTR |
| AAATGAAGCGAAGAAAACGA+GGG | 0.676255 | 4_2:-68732276 | None:intergenic |
| GAGAATAGTACCATGACATG+GGG | 0.680357 | 4_2:-68736576 | None:intergenic |
| AAGATGCAACCTGATGCTGA+GGG | 0.680874 | 4_2:+68736447 | Msa0618020:CDS |
| TCTAGGTGAAATGACTACTG+TGG | 0.723327 | 4_2:+68733647 | Msa0618020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATATTGTTTACTT+TGG | + | chr4_2:68732834-68732853 | Msa0618020:intron | 10.0% |
| !!! | CTAATTTATTCTTTTATAAA+AGG | - | chr4_2:68734007-68734026 | None:intergenic | 10.0% |
| !!! | ATAAATTCATTTTTTTTAAC+TGG | + | chr4_2:68735511-68735530 | Msa0618020:intron | 10.0% |
| !!! | TAAATTCATTTTTTTTAACT+GGG | + | chr4_2:68735512-68735531 | Msa0618020:intron | 10.0% |
| !!! | AATTAGTCAAACTTTTTATT+AGG | + | chr4_2:68734021-68734040 | Msa0618020:intron | 15.0% |
| !! | TTCTGTTATCTATTAAAAAA+AGG | - | chr4_2:68734495-68734514 | None:intergenic | 15.0% |
| !!! | TTAATTTCAATTTTGTAACT+TGG | + | chr4_2:68735108-68735127 | Msa0618020:intron | 15.0% |
| !! | GCAAAAAAAAAAAAAAAGAT+AGG | - | chr4_2:68735704-68735723 | None:intergenic | 15.0% |
| !!! | TTTTTGCAGTATAATAAAAA+GGG | - | chr4_2:68736312-68736331 | None:intergenic | 15.0% |
| !!! | TTTTTTGCAGTATAATAAAA+AGG | - | chr4_2:68736313-68736332 | None:intergenic | 15.0% |
| !! | AATAGATTGATAAAAGATAA+TGG | + | chr4_2:68737296-68737315 | Msa0618020:intron | 15.0% |
| !! | AATAGATTGATAAAAGATAA+TGG | + | chr4_2:68737296-68737315 | Msa0618020:intron | 15.0% |
| !!! | TCTTTCATTTTTTGATGATT+TGG | + | chr4_2:68732475-68732494 | Msa0618020:intron | 20.0% |
| !!! | TTTTTTGATGATTTGGTATT+TGG | + | chr4_2:68732482-68732501 | Msa0618020:intron | 20.0% |
| !!! | TTTTTGATGATTTGGTATTT+GGG | + | chr4_2:68732483-68732502 | Msa0618020:intron | 20.0% |
| !!! | TGTTTTTTTGTTTTGAATTC+AGG | + | chr4_2:68732539-68732558 | Msa0618020:intron | 20.0% |
| !! | ATTTATTGAGTCATTGTATT+TGG | + | chr4_2:68732864-68732883 | Msa0618020:intron | 20.0% |
| !! | ATTGCAATATTCATCAAAAT+TGG | + | chr4_2:68733034-68733053 | Msa0618020:intron | 20.0% |
| !! | TAAAAACACAATGTAATTGT+AGG | - | chr4_2:68733140-68733159 | None:intergenic | 20.0% |
| !!! | ATAAAACATATCCTTTTGAA+TGG | - | chr4_2:68733185-68733204 | None:intergenic | 20.0% |
| !! | AACATTTCCCTTTATAAAAA+GGG | - | chr4_2:68733811-68733830 | None:intergenic | 20.0% |
| !! | TAACATTTCCCTTTATAAAA+AGG | - | chr4_2:68733812-68733831 | None:intergenic | 20.0% |
| !! | TAAAGGTAGAAAAAAAATCT+TGG | + | chr4_2:68733864-68733883 | Msa0618020:intron | 20.0% |
| !! | AAACTAACAACAGTATATTA+TGG | + | chr4_2:68734252-68734271 | Msa0618020:intron | 20.0% |
| !! | AACTAACAACAGTATATTAT+GGG | + | chr4_2:68734253-68734272 | Msa0618020:intron | 20.0% |
| !!! | AAGGTTTTGAAATCTAATAT+TGG | + | chr4_2:68734413-68734432 | Msa0618020:intron | 20.0% |
| !! | AAATCTAATATTGGATGATA+AGG | + | chr4_2:68734422-68734441 | Msa0618020:intron | 20.0% |
| !! | AATCTAATATTGGATGATAA+GGG | + | chr4_2:68734423-68734442 | Msa0618020:intron | 20.0% |
| !! | ATTTGATATGATGAATAAAG+GGG | - | chr4_2:68734579-68734598 | None:intergenic | 20.0% |
| !! | CATTTGATATGATGAATAAA+GGG | - | chr4_2:68734580-68734599 | None:intergenic | 20.0% |
| !! | TATTGTATTTACTAGCTAAT+TGG | + | chr4_2:68734633-68734652 | Msa0618020:intron | 20.0% |
| !!! | TATTTCAGTTTTTTACAATC+AGG | - | chr4_2:68734782-68734801 | None:intergenic | 20.0% |
| !!! | ATCTAAGTGTAATTTGTTAA+GGG | - | chr4_2:68735563-68735582 | None:intergenic | 20.0% |
| !! | GTGAAATTATAGTTTGATTA+AGG | - | chr4_2:68735910-68735929 | None:intergenic | 20.0% |
| !!! | ATTACCAATTTTCTTCTAAT+CGG | + | chr4_2:68736239-68736258 | Msa0618020:intron | 20.0% |
| !!! | ATTGATTTTTTTATTGCCTT+TGG | + | chr4_2:68736604-68736623 | Msa0618020:intron | 20.0% |
| !! | ATAGTGAATAAATCATAGTT+AGG | - | chr4_2:68737421-68737440 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCAAACTCAAAT+TGG | - | chr4_2:68737484-68737503 | None:intergenic | 20.0% |
| !! | ATAGTGAATAAATCATAGTT+AGG | - | chr4_2:68737421-68737440 | None:intergenic | 20.0% |
| ! | AAACAAGGAAAACAATGAAA+AGG | - | chr4_2:68732101-68732120 | None:intergenic | 25.0% |
| !!! | GAGTTTTATAAGCTCTTATT+TGG | - | chr4_2:68732189-68732208 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTGAATTCAGGTT+AGG | + | chr4_2:68732544-68732563 | Msa0618020:intron | 25.0% |
| ! | AAGATAATTGAAACAACATC+TGG | - | chr4_2:68732670-68732689 | None:intergenic | 25.0% |
| !!! | TTGTGTTGATAATTTCAATG+TGG | + | chr4_2:68732736-68732755 | Msa0618020:intron | 25.0% |
| !!! | TGTGTTGATAATTTCAATGT+GGG | + | chr4_2:68732737-68732756 | Msa0618020:intron | 25.0% |
| ! | ATATTCATCAAAATTGGATC+TGG | + | chr4_2:68733040-68733059 | Msa0618020:intron | 25.0% |
| !!! | TATCCTTTTGAATGGATTAA+GGG | - | chr4_2:68733177-68733196 | None:intergenic | 25.0% |
| !!! | ATATCCTTTTGAATGGATTA+AGG | - | chr4_2:68733178-68733197 | None:intergenic | 25.0% |
| !!! | GTTATGGAATGCATTTTTTA+TGG | + | chr4_2:68733246-68733265 | Msa0618020:intron | 25.0% |
| !!! | TGCATTTTTTATGGTGTTAA+CGG | + | chr4_2:68733255-68733274 | Msa0618020:intron | 25.0% |
| ! | ATGAGTCAACAATATCAAAA+TGG | - | chr4_2:68733684-68733703 | None:intergenic | 25.0% |
| !!! | GAATACTTTTGAAACATCAA+TGG | - | chr4_2:68733781-68733800 | None:intergenic | 25.0% |
| ! | ACATTTCCCTTTATAAAAAG+GGG | - | chr4_2:68733810-68733829 | None:intergenic | 25.0% |
| ! | TTCTCAAATGATGAAAAGAT+AGG | - | chr4_2:68734215-68734234 | None:intergenic | 25.0% |
| !! | ATACTGTTGTTAGTTTCAAA+AGG | - | chr4_2:68734248-68734267 | None:intergenic | 25.0% |
| ! | ACTAACAACAGTATATTATG+GGG | + | chr4_2:68734254-68734273 | Msa0618020:intron | 25.0% |
| !! | TTTAATTTCTACTTTGCTGA+AGG | + | chr4_2:68734366-68734385 | Msa0618020:intron | 25.0% |
| ! | TTAATTTCTACTTTGCTGAA+GGG | + | chr4_2:68734367-68734386 | Msa0618020:intron | 25.0% |
| ! | AGTGGCAATAAAAAATCTTA+AGG | + | chr4_2:68734394-68734413 | Msa0618020:intron | 25.0% |
| ! | CCATTTGATATGATGAATAA+AGG | - | chr4_2:68734581-68734600 | None:intergenic | 25.0% |
| ! | CCTTTATTCATCATATCAAA+TGG | + | chr4_2:68734578-68734597 | Msa0618020:intron | 25.0% |
| ! | ATTTCATCTTAGTTCATGTT+TGG | + | chr4_2:68734801-68734820 | Msa0618020:intron | 25.0% |
| ! | AAATAGATACTATCTTGAGT+AGG | + | chr4_2:68734911-68734930 | Msa0618020:intron | 25.0% |
| ! | AATAGATACTATCTTGAGTA+GGG | + | chr4_2:68734912-68734931 | Msa0618020:intron | 25.0% |
| ! | AGAAATCAGTCTTAATTTCA+TGG | + | chr4_2:68735000-68735019 | Msa0618020:intron | 25.0% |
| ! | GAGCTTAAATTAATCCAAAT+TGG | - | chr4_2:68735027-68735046 | None:intergenic | 25.0% |
| ! | AGACTCAATTTATACAAGAT+TGG | - | chr4_2:68735073-68735092 | None:intergenic | 25.0% |
| !! | AATGTATGTAAGTTCAAGTT+TGG | + | chr4_2:68735254-68735273 | Msa0618020:intron | 25.0% |
| ! | TATTGTCAAACTTGACATTA+GGG | - | chr4_2:68735356-68735375 | None:intergenic | 25.0% |
| !!! | GATCTAAGTGTAATTTGTTA+AGG | - | chr4_2:68735564-68735583 | None:intergenic | 25.0% |
| ! | TGAAGAGGTTGTTTATTTAT+TGG | + | chr4_2:68735676-68735695 | Msa0618020:intron | 25.0% |
| ! | TGTGTGAACAATTCTTAAAA+CGG | - | chr4_2:68735735-68735754 | None:intergenic | 25.0% |
| ! | AACAACCTAATAAACATTGA+TGG | + | chr4_2:68735770-68735789 | Msa0618020:intron | 25.0% |
| !! | GTTTAAAATTAAGTGAGCTA+GGG | - | chr4_2:68735796-68735815 | None:intergenic | 25.0% |
| !! | CTTTTTCTGTGTCTTTTAAA+AGG | - | chr4_2:68735829-68735848 | None:intergenic | 25.0% |
| ! | ATGATAGAAACAAAAACATG+TGG | - | chr4_2:68736045-68736064 | None:intergenic | 25.0% |
| ! | ATTGTACCATAATCACAAAT+TGG | - | chr4_2:68736126-68736145 | None:intergenic | 25.0% |
| ! | ATTTGTGATTATGGTACAAT+CGG | + | chr4_2:68736126-68736145 | Msa0618020:intron | 25.0% |
| !! | AGAAAATTGGTAATCAGAAA+AGG | - | chr4_2:68736233-68736252 | None:intergenic | 25.0% |
| ! | ATTAATGTACACAATCCAAA+TGG | - | chr4_2:68736277-68736296 | None:intergenic | 25.0% |
| ! | TCAAGTTTATATACTGCTTA+TGG | + | chr4_2:68736673-68736692 | Msa0618020:intron | 25.0% |
| ! | AGAAATTGGAGAAAAGTTAT+GGG | + | chr4_2:68736727-68736746 | Msa0618020:CDS | 25.0% |
| !!! | TTGAGCATTGAATAATTTGT+TGG | + | chr4_2:68736791-68736810 | Msa0618020:three_prime_UTR | 25.0% |
| ! | TGATATCCAATTTCCAAAAA+GGG | - | chr4_2:68736829-68736848 | None:intergenic | 25.0% |
| ! | TTGATATCCAATTTCCAAAA+AGG | - | chr4_2:68736830-68736849 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATTGGATATCAA+TGG | + | chr4_2:68736830-68736849 | Msa0618020:three_prime_UTR | 25.0% |
| !!! | GTATAAATCCCATTTTTGAA+TGG | + | chr4_2:68736979-68736998 | Msa0618020:three_prime_UTR | 25.0% |
| ! | CACAACTAAACTCTATATAT+AGG | - | chr4_2:68737340-68737359 | None:intergenic | 25.0% |
| ! | GTTAGGTTATATGTAAACTA+TGG | - | chr4_2:68737404-68737423 | None:intergenic | 25.0% |
| ! | ACTGAAGTAACTAAGAAAAA+TGG | + | chr4_2:68737524-68737543 | Msa0618020:intron | 25.0% |
| ! | CTGAAGTAACTAAGAAAAAT+GGG | + | chr4_2:68737525-68737544 | Msa0618020:intron | 25.0% |
| ! | TGAAGTAACTAAGAAAAATG+GGG | + | chr4_2:68737526-68737545 | Msa0618020:intron | 25.0% |
| ! | CACACAAAAAATGAAAACAT+AGG | + | chr4_2:68737567-68737586 | Msa0618020:intron | 25.0% |
| ! | GTTTACATGAATGAAAAGTT+TGG | - | chr4_2:68737763-68737782 | None:intergenic | 25.0% |
| !! | AACAATTTTCCTTCAATTGA+AGG | + | chr4_2:68738639-68738658 | Msa0618020:intron | 25.0% |
| !!! | GAATTCATTTTTGGTAGTTT+CGG | - | chr4_2:68738711-68738730 | None:intergenic | 25.0% |
| !! | TCTGAATACGAATTCATTTT+TGG | - | chr4_2:68738720-68738739 | None:intergenic | 25.0% |
| ! | CACAACTAAACTCTATATAT+AGG | - | chr4_2:68737340-68737359 | None:intergenic | 25.0% |
| ! | GTTAGGTTATATGTAAACTA+TGG | - | chr4_2:68737404-68737423 | None:intergenic | 25.0% |
| !! | TCATTGTTTTCCTTGTTTGT+TGG | + | chr4_2:68732103-68732122 | Msa0618020:five_prime_UTR | 30.0% |
| !! | CATTGTTTTCCTTGTTTGTT+GGG | + | chr4_2:68732104-68732123 | Msa0618020:five_prime_UTR | 30.0% |
| !!! | AAGCTCTTATTTGGTTTTTG+TGG | - | chr4_2:68732180-68732199 | None:intergenic | 30.0% |
| ! | ATCAATAGGTTGAATAACAC+AGG | - | chr4_2:68732423-68732442 | None:intergenic | 30.0% |
| TCAACCTATTGATATGATCA+AGG | + | chr4_2:68732430-68732449 | Msa0618020:CDS | 30.0% | |
| CATACCTTGATCATATCAAT+AGG | - | chr4_2:68732437-68732456 | None:intergenic | 30.0% | |
| ACAACATCTGGAAAAAAAGA+AGG | - | chr4_2:68732658-68732677 | None:intergenic | 30.0% | |
| !! | TTTTAGATCTGTGAGTTGAA+GGG | + | chr4_2:68732809-68732828 | Msa0618020:intron | 30.0% |
| !! | TGAGTCATTGTATTTGGTTT+TGG | + | chr4_2:68732870-68732889 | Msa0618020:intron | 30.0% |
| ! | ATCAAAATTGGATCTGGAAT+TGG | + | chr4_2:68733046-68733065 | Msa0618020:intron | 30.0% |
| !! | GCTCTGAAAGAAATTACAAA+AGG | - | chr4_2:68733076-68733095 | None:intergenic | 30.0% |
| ACACAATGTAATTGTAGGAT+GGG | - | chr4_2:68733135-68733154 | None:intergenic | 30.0% | |
| AACACAATGTAATTGTAGGA+TGG | - | chr4_2:68733136-68733155 | None:intergenic | 30.0% | |
| TTAACGGTTGTCTTACTTAT+TGG | + | chr4_2:68733271-68733290 | Msa0618020:intron | 30.0% | |
| CTTGACAAATAAAGCAATTG+AGG | + | chr4_2:68733314-68733333 | Msa0618020:CDS | 30.0% | |
| ! | TTGACACTTGCTAAAAGATT+TGG | - | chr4_2:68733724-68733743 | None:intergenic | 30.0% |
| ! | CACAAACCCCTTTTTATAAA+GGG | + | chr4_2:68733801-68733820 | Msa0618020:intron | 30.0% |
| AAATGTTAACTTATGCCCTT+GGG | + | chr4_2:68733824-68733843 | Msa0618020:intron | 30.0% | |
| GCATAAGTTAAAAAGGCTAA+AGG | + | chr4_2:68733847-68733866 | Msa0618020:intron | 30.0% | |
| ACAAGTTAAGGAGCTTAAAA+TGG | - | chr4_2:68733958-68733977 | None:intergenic | 30.0% | |
| AACTCCACAAAAATGAAACA+GGG | - | chr4_2:68734153-68734172 | None:intergenic | 30.0% | |
| AAACTCCACAAAAATGAAAC+AGG | - | chr4_2:68734154-68734173 | None:intergenic | 30.0% | |
| ! | TTTTATCTACTGTGGTGTAA+AGG | - | chr4_2:68734545-68734564 | None:intergenic | 30.0% |
| TGTATTTACTAGCTAATTGG+TGG | + | chr4_2:68734636-68734655 | Msa0618020:intron | 30.0% | |
| GTATTTACTAGCTAATTGGT+GGG | + | chr4_2:68734637-68734656 | Msa0618020:intron | 30.0% | |
| !!! | TACGAGTCTAGTTTTGAAAA+GGG | - | chr4_2:68734681-68734700 | None:intergenic | 30.0% |
| !!! | ATACGAGTCTAGTTTTGAAA+AGG | - | chr4_2:68734682-68734701 | None:intergenic | 30.0% |
| ATACAACTATAGCACAAGAA+AGG | - | chr4_2:68734739-68734758 | None:intergenic | 30.0% | |
| ACTTGAGTTTGAATTGAACT+AGG | - | chr4_2:68734967-68734986 | None:intergenic | 30.0% | |
| CTTAATTTCATGGTCCAATT+TGG | + | chr4_2:68735010-68735029 | Msa0618020:intron | 30.0% | |
| GTATTGTCAAACTTGACATT+AGG | - | chr4_2:68735357-68735376 | None:intergenic | 30.0% | |
| !! | CGATTGCTACAATTTAGTTT+TGG | + | chr4_2:68735618-68735637 | Msa0618020:intron | 30.0% |
| ! | GGTTTAAAATTAAGTGAGCT+AGG | - | chr4_2:68735797-68735816 | None:intergenic | 30.0% |
| !! | GTTCTTTGAAATAGTGAATC+TGG | + | chr4_2:68735931-68735950 | Msa0618020:intron | 30.0% |
| AACTAAATATGCCATCTCTT+GGG | - | chr4_2:68736010-68736029 | None:intergenic | 30.0% | |
| TAACTAAATATGCCATCTCT+TGG | - | chr4_2:68736011-68736030 | None:intergenic | 30.0% | |
| TGCATTCCAATTTGTGATTA+TGG | + | chr4_2:68736117-68736136 | Msa0618020:intron | 30.0% | |
| TTTCTTGTCTAAGTCATGTA+AGG | + | chr4_2:68736200-68736219 | Msa0618020:intron | 30.0% | |
| TTCTTGTCTAAGTCATGTAA+GGG | + | chr4_2:68736201-68736220 | Msa0618020:intron | 30.0% | |
| ATCTCCGATTAGAAGAAAAT+TGG | - | chr4_2:68736246-68736265 | None:intergenic | 30.0% | |
| TGAGTCTTCACATAATCAAA+TGG | - | chr4_2:68736420-68736439 | None:intergenic | 30.0% | |
| AATCCGGTGTAAAATTTGAA+GGG | - | chr4_2:68736531-68736550 | None:intergenic | 30.0% | |
| TAGCTAGAAAAACATACCAA+AGG | - | chr4_2:68736623-68736642 | None:intergenic | 30.0% | |
| ! | CATAACTTTTCTCCAATTTC+TGG | - | chr4_2:68736728-68736747 | None:intergenic | 30.0% |
| CAGAAATTGGAGAAAAGTTA+TGG | + | chr4_2:68736726-68736745 | Msa0618020:CDS | 30.0% | |
| AATTAGTCATGCAATTCAAG+CGG | + | chr4_2:68736878-68736897 | Msa0618020:three_prime_UTR | 30.0% | |
| TATGATATGATATGATGCGT+TGG | + | chr4_2:68736942-68736961 | Msa0618020:three_prime_UTR | 30.0% | |
| CAAGTTCTCCATTCAAAAAT+GGG | - | chr4_2:68736990-68737009 | None:intergenic | 30.0% | |
| ACAAGTTCTCCATTCAAAAA+TGG | - | chr4_2:68736991-68737010 | None:intergenic | 30.0% | |
| ATAACATGTACAATATCTCG+TGG | + | chr4_2:68737158-68737177 | Msa0618020:three_prime_UTR | 30.0% | |
| TAACATGTACAATATCTCGT+GGG | + | chr4_2:68737159-68737178 | Msa0618020:three_prime_UTR | 30.0% | |
| TCACTATGACTATTATCCTT+GGG | - | chr4_2:68737211-68737230 | None:intergenic | 30.0% | |
| ATCACTATGACTATTATCCT+TGG | - | chr4_2:68737212-68737231 | None:intergenic | 30.0% | |
| GAAGTAACTAAGAAAAATGG+GGG | + | chr4_2:68737527-68737546 | Msa0618020:intron | 30.0% | |
| !! | GAAGGTTCTGATAGTAATTT+TGG | - | chr4_2:68737721-68737740 | None:intergenic | 30.0% |
| ! | AAGTTTGGTATAAGCTGTTT+TGG | - | chr4_2:68737748-68737767 | None:intergenic | 30.0% |
| !! | TCACTTTTACACAATCGTTT+TGG | - | chr4_2:68737991-68738010 | None:intergenic | 30.0% |
| ! | ATTTTTCGTTTCTTTCTGCT+TGG | - | chr4_2:68738185-68738204 | None:intergenic | 30.0% |
| AGAAAGAAACTTTACCATAG+AGG | + | chr4_2:68738395-68738414 | Msa0618020:intron | 30.0% | |
| TTCGTTATCTGAATCTGTTA+CGG | - | chr4_2:68738592-68738611 | None:intergenic | 30.0% | |
| GAAGGAAAATTGTTCAAGAT+TGG | - | chr4_2:68738633-68738652 | None:intergenic | 30.0% | |
| AGTTTCATCTGAATCTTCAT+CGG | + | chr4_2:68738785-68738804 | Msa0618020:intron | 30.0% | |
| TCACTATGACTATTATCCTT+GGG | - | chr4_2:68737211-68737230 | None:intergenic | 30.0% | |
| ATCACTATGACTATTATCCT+TGG | - | chr4_2:68737212-68737231 | None:intergenic | 30.0% | |
| TCTTCTTAACCCAACAAACA+AGG | - | chr4_2:68732116-68732135 | None:intergenic | 35.0% | |
| AAATGAAGCGAAGAAAACGA+GGG | - | chr4_2:68732279-68732298 | None:intergenic | 35.0% | |
| AACTTCGCTAATACCAACAA+TGG | + | chr4_2:68732307-68732326 | Msa0618020:exon | 35.0% | |
| ACTTCGCTAATACCAACAAT+GGG | + | chr4_2:68732308-68732327 | Msa0618020:exon | 35.0% | |
| ! | AATTCAGGTTAGGATTCAAC+TGG | + | chr4_2:68732554-68732573 | Msa0618020:intron | 35.0% |
| ! | ATTCAGGTTAGGATTCAACT+GGG | + | chr4_2:68732555-68732574 | Msa0618020:intron | 35.0% |
| TTCTACCATGCTTAAGAATG+AGG | + | chr4_2:68732602-68732621 | Msa0618020:CDS | 35.0% | |
| TCTACCATGCTTAAGAATGA+GGG | + | chr4_2:68732603-68732622 | Msa0618020:CDS | 35.0% | |
| ! | TTTGACTGCTTTGTTCTTAG+TGG | + | chr4_2:68732706-68732725 | Msa0618020:intron | 35.0% |
| !! | CTTTTAGATCTGTGAGTTGA+AGG | + | chr4_2:68732808-68732827 | Msa0618020:intron | 35.0% |
| ! | TTTAGATCTGTGAGTTGAAG+GGG | + | chr4_2:68732810-68732829 | Msa0618020:intron | 35.0% |
| CTAAATCCATACCTCAACAA+AGG | - | chr4_2:68732903-68732922 | None:intergenic | 35.0% | |
| TTGTTGAGGTATGGATTTAG+TGG | + | chr4_2:68732903-68732922 | Msa0618020:intron | 35.0% | |
| ATGCAAAGGACTAATGACAA+AGG | - | chr4_2:68733224-68733243 | None:intergenic | 35.0% | |
| TTGTCATTAGTCCTTTGCAT+TGG | + | chr4_2:68733224-68733243 | Msa0618020:intron | 35.0% | |
| !! | TTAGTCCTTTGCATTGGTTA+TGG | + | chr4_2:68733230-68733249 | Msa0618020:intron | 35.0% |
| TCTACCAAAAAGCTCTATGT+GGG | + | chr4_2:68733361-68733380 | Msa0618020:CDS | 35.0% | |
| !! | TCAAAGTGTTGAGTTCTTCA+AGG | + | chr4_2:68733614-68733633 | Msa0618020:CDS | 35.0% |
| CCTTTATAAAAAGGGGTTTG+TGG | - | chr4_2:68733803-68733822 | None:intergenic | 35.0% | |
| ! | CCACAAACCCCTTTTTATAA+AGG | + | chr4_2:68733800-68733819 | Msa0618020:intron | 35.0% |
| GAAATGTTAACTTATGCCCT+TGG | + | chr4_2:68733823-68733842 | Msa0618020:intron | 35.0% | |
| AATGTTAACTTATGCCCTTG+GGG | + | chr4_2:68733825-68733844 | Msa0618020:intron | 35.0% | |
| !!! | CTTTTTAACTTATGCCCCAA+GGG | - | chr4_2:68733842-68733861 | None:intergenic | 35.0% |
| AAACAGCAAAGAAACAGAAC+AGG | - | chr4_2:68734116-68734135 | None:intergenic | 35.0% | |
| !! | GTTCTGTTTCTTTGCTGTTT+AGG | + | chr4_2:68734116-68734135 | Msa0618020:intron | 35.0% |
| !! | AATGCCCTGTTTCATTTTTG+TGG | + | chr4_2:68734146-68734165 | Msa0618020:intron | 35.0% |
| ACTGTGGTGTAAAGGAAATA+GGG | - | chr4_2:68734537-68734556 | None:intergenic | 35.0% | |
| TACTGTGGTGTAAAGGAAAT+AGG | - | chr4_2:68734538-68734557 | None:intergenic | 35.0% | |
| ATGAATAAAGGGGAAACTAG+GGG | - | chr4_2:68734569-68734588 | None:intergenic | 35.0% | |
| GATGAATAAAGGGGAAACTA+GGG | - | chr4_2:68734570-68734589 | None:intergenic | 35.0% | |
| TGATGAATAAAGGGGAAACT+AGG | - | chr4_2:68734571-68734590 | None:intergenic | 35.0% | |
| !!! | ACGAGTCTAGTTTTGAAAAG+GGG | - | chr4_2:68734680-68734699 | None:intergenic | 35.0% |
| ACTAGACTCGTATAGATCAA+AGG | + | chr4_2:68734689-68734708 | Msa0618020:intron | 35.0% | |
| AGTTTGAATTGAACTAGGTC+TGG | - | chr4_2:68734962-68734981 | None:intergenic | 35.0% | |
| TCATTGAGTTTCAAAAGTCG+GGG | - | chr4_2:68735049-68735068 | None:intergenic | 35.0% | |
| CTCATTGAGTTTCAAAAGTC+GGG | - | chr4_2:68735050-68735069 | None:intergenic | 35.0% | |
| GCTCATTGAGTTTCAAAAGT+CGG | - | chr4_2:68735051-68735070 | None:intergenic | 35.0% | |
| ! | ATTGAGTCTTTTATGCTCAG+TGG | + | chr4_2:68735084-68735103 | Msa0618020:intron | 35.0% |
| ! | TTGAGTCTTTTATGCTCAGT+GGG | + | chr4_2:68735085-68735104 | Msa0618020:intron | 35.0% |
| TAAGAGATACACGAAGATGA+AGG | + | chr4_2:68735390-68735409 | Msa0618020:intron | 35.0% | |
| ACGAAGATGAAGGTTATATC+TGG | + | chr4_2:68735400-68735419 | Msa0618020:intron | 35.0% | |
| !! | GCATTTCTTTCTAGTTGGAT+AGG | + | chr4_2:68735534-68735553 | Msa0618020:intron | 35.0% |
| AATTGTAGCAATCGCACTAT+AGG | - | chr4_2:68735612-68735631 | None:intergenic | 35.0% | |
| TTCACACATCAAAAGTGAAC+TGG | + | chr4_2:68735747-68735766 | Msa0618020:intron | 35.0% | |
| TAGGGCCATCAATGTTTATT+AGG | - | chr4_2:68735778-68735797 | None:intergenic | 35.0% | |
| CAACTTACAGCAACAAAACA+AGG | - | chr4_2:68735857-68735876 | None:intergenic | 35.0% | |
| !!! | CTTGTTTTGTTGCTGTAAGT+TGG | + | chr4_2:68735855-68735874 | Msa0618020:intron | 35.0% |
| !! | AGTGAATCTGGTTCTTTATC+TGG | + | chr4_2:68735943-68735962 | Msa0618020:intron | 35.0% |
| GAACATAGTACCATTGACAT+TGG | - | chr4_2:68735969-68735988 | None:intergenic | 35.0% | |
| AAACAAAAACATGTGGCAAC+AGG | - | chr4_2:68736038-68736057 | None:intergenic | 35.0% | |
| GTTCAAGACACATATTGCAA+GGG | - | chr4_2:68736070-68736089 | None:intergenic | 35.0% | |
| AGTTCAAGACACATATTGCA+AGG | - | chr4_2:68736071-68736090 | None:intergenic | 35.0% | |
| CGGAGATATGATATTCCATT+TGG | + | chr4_2:68736259-68736278 | Msa0618020:intron | 35.0% | |
| AGAAGAGATTCAGTAGCAAA+TGG | - | chr4_2:68736349-68736368 | None:intergenic | 35.0% | |
| TGCTACTGAATCTCTTCTTT+AGG | + | chr4_2:68736351-68736370 | Msa0618020:intron | 35.0% | |
| GAATCCGGTGTAAAATTTGA+AGG | - | chr4_2:68736532-68736551 | None:intergenic | 35.0% | |
| AGAGAATAGTACCATGACAT+GGG | - | chr4_2:68736580-68736599 | None:intergenic | 35.0% | |
| AAGAGAATAGTACCATGACA+TGG | - | chr4_2:68736581-68736600 | None:intergenic | 35.0% | |
| ! | GGAGAAAAGTTATGGGTTAT+AGG | + | chr4_2:68736734-68736753 | Msa0618020:CDS | 35.0% |
| ! | AAGTTATGGGTTATAGGTGA+TGG | + | chr4_2:68736740-68736759 | Msa0618020:exon | 35.0% |
| !! | TAATTTGTTGGCTGTGTTGT+AGG | + | chr4_2:68736803-68736822 | Msa0618020:three_prime_UTR | 35.0% |
| ATTAGTCATGCAATTCAAGC+GGG | + | chr4_2:68736879-68736898 | Msa0618020:three_prime_UTR | 35.0% | |
| AAGTAACCATAGAGACTCAT+AGG | + | chr4_2:68737267-68737286 | Msa0618020:intron | 35.0% | |
| ! | CTATGGTTAGTTAGTTAGCT+TGG | - | chr4_2:68737387-68737406 | None:intergenic | 35.0% |
| !!! | TTTCCCCATTTTGAGTTTGA+GGG | - | chr4_2:68737457-68737476 | None:intergenic | 35.0% |
| !!! | ATTTCCCCATTTTGAGTTTG+AGG | - | chr4_2:68737458-68737477 | None:intergenic | 35.0% |
| TGGGGGTTAAAACTAGTAAA+TGG | + | chr4_2:68737544-68737563 | Msa0618020:intron | 35.0% | |
| ! | GAGGATCAGATTTTCACATT+GGG | - | chr4_2:68737632-68737651 | None:intergenic | 35.0% |
| ! | AGAGGATCAGATTTTCACAT+TGG | - | chr4_2:68737633-68737652 | None:intergenic | 35.0% |
| ! | CATTCTTCTGTTTAGAGCTT+TGG | - | chr4_2:68737661-68737680 | None:intergenic | 35.0% |
| !! | AGCTCTAAACAGAAGAATGA+AGG | + | chr4_2:68737662-68737681 | Msa0618020:intron | 35.0% |
| ! | TTTTGGTACAGAAGCTGTTT+TGG | - | chr4_2:68737704-68737723 | None:intergenic | 35.0% |
| !!! | TTGTTTTGTTTCCTTTTCCG+TGG | - | chr4_2:68737871-68737890 | None:intergenic | 35.0% |
| !! | CTTCAGATTTGCTGTTATGA+GGG | - | chr4_2:68737900-68737919 | None:intergenic | 35.0% |
| AAGAAACTTTACCATAGAGG+TGG | + | chr4_2:68738398-68738417 | Msa0618020:intron | 35.0% | |
| ACGATTACACCTTCAATTGA+AGG | - | chr4_2:68738651-68738670 | None:intergenic | 35.0% | |
| TTGAACTGTGATCAAATCAG+AGG | + | chr4_2:68738743-68738762 | Msa0618020:intron | 35.0% | |
| ATCGGAAATTGCAACTTTGT+CGG | + | chr4_2:68738803-68738822 | Msa0618020:intron | 35.0% | |
| AACTTTGTCGGAATCTTCAA+CGG | + | chr4_2:68738815-68738834 | Msa0618020:intron | 35.0% | |
| AAGTAACCATAGAGACTCAT+AGG | + | chr4_2:68737267-68737286 | Msa0618020:intron | 35.0% | |
| ! | CTATGGTTAGTTAGTTAGCT+TGG | - | chr4_2:68737387-68737406 | None:intergenic | 35.0% |
| GAAGTGAAGAACGAATCTAG+TGG | - | chr4_2:68732214-68732233 | None:intergenic | 40.0% | |
| GAAATGAAGCGAAGAAAACG+AGG | - | chr4_2:68732280-68732299 | None:intergenic | 40.0% | |
| AACACCCTCATTCTTAAGCA+TGG | - | chr4_2:68732610-68732629 | None:intergenic | 40.0% | |
| ! | ATGCTTAAGAATGAGGGTGT+TGG | + | chr4_2:68732609-68732628 | Msa0618020:CDS | 40.0% |
| CAACTCACAGATCTAAAAGC+AGG | - | chr4_2:68732807-68732826 | None:intergenic | 40.0% | |
| TTGGACTTCATCCTTTGTTG+AGG | + | chr4_2:68732889-68732908 | Msa0618020:intron | 40.0% | |
| CTTCATCCTTTGTTGAGGTA+TGG | + | chr4_2:68732894-68732913 | Msa0618020:intron | 40.0% | |
| TAAGCTGAATCACTTCTTGC+AGG | + | chr4_2:68732930-68732949 | Msa0618020:intron | 40.0% | |
| AAGCTGAATCACTTCTTGCA+GGG | + | chr4_2:68732931-68732950 | Msa0618020:intron | 40.0% | |
| CAACTCACCTAAATGTTCCA+AGG | - | chr4_2:68733002-68733021 | None:intergenic | 40.0% | |
| CAGCCCTTAATCCATTCAAA+AGG | + | chr4_2:68733171-68733190 | Msa0618020:intron | 40.0% | |
| GCATTCCATAACCAATGCAA+AGG | - | chr4_2:68733238-68733257 | None:intergenic | 40.0% | |
| AAAGCAATTGAGGCCAATGA+TGG | + | chr4_2:68733324-68733343 | Msa0618020:CDS | 40.0% | |
| !! | CATAGAGCTTTTTGGTAGAG+TGG | - | chr4_2:68733360-68733379 | None:intergenic | 40.0% |
| CTCTACCAAAAAGCTCTATG+TGG | + | chr4_2:68733360-68733379 | Msa0618020:CDS | 40.0% | |
| ATGAAGGGATTCTTTCACTG+TGG | + | chr4_2:68733526-68733545 | Msa0618020:intron | 40.0% | |
| AGTCATTTCACCTAGACCAA+CGG | - | chr4_2:68733643-68733662 | None:intergenic | 40.0% | |
| TCTAGGTGAAATGACTACTG+TGG | + | chr4_2:68733647-68733666 | Msa0618020:CDS | 40.0% | |
| !!! | CCTTTTTAACTTATGCCCCA+AGG | - | chr4_2:68733843-68733862 | None:intergenic | 40.0% |
| CCTTGGGGCATAAGTTAAAA+AGG | + | chr4_2:68733840-68733859 | Msa0618020:intron | 40.0% | |
| !! | CATGTTAACTTGTGCCCTTA+GGG | - | chr4_2:68733982-68734001 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | chr4_2:68733983-68734002 | None:intergenic | 40.0% |
| TAGGGAGGAAGATTAGATGA+TGG | - | chr4_2:68734519-68734538 | None:intergenic | 40.0% | |
| ! | CTAGGGGATTTTATCTACTG+TGG | - | chr4_2:68734553-68734572 | None:intergenic | 40.0% |
| GATACTATCTTGAGTAGGGT+TGG | + | chr4_2:68734916-68734935 | Msa0618020:intron | 40.0% | |
| !! | AGAAGCATCACTGTTATTCG+AGG | + | chr4_2:68735209-68735228 | Msa0618020:intron | 40.0% |
| ! | CTTTCTGTACTGAGTTGAGT+AGG | + | chr4_2:68735302-68735321 | Msa0618020:intron | 40.0% |
| TGTCAAACTTGACATTAGGG+CGG | - | chr4_2:68735353-68735372 | None:intergenic | 40.0% | |
| ! | ACTGGGCATTTCTTTCTAGT+TGG | + | chr4_2:68735529-68735548 | Msa0618020:intron | 40.0% |
| TAACTCAGTGAACTGTGAAG+AGG | + | chr4_2:68735661-68735680 | Msa0618020:intron | 40.0% | |
| !! | TCTTTTAAAAGGCTGACGCA+TGG | - | chr4_2:68735818-68735837 | None:intergenic | 40.0% |
| CTTTATCTGGCCAATGTCAA+TGG | + | chr4_2:68735956-68735975 | Msa0618020:intron | 40.0% | |
| TATGGTACAATCGGTAGTCT+TGG | + | chr4_2:68736135-68736154 | Msa0618020:intron | 40.0% | |
| TTAGGTGCAAGTAGTGTATC+TGG | + | chr4_2:68736369-68736388 | Msa0618020:intron | 40.0% | |
| GAGGGAAAATATCCATACAC+CGG | + | chr4_2:68736465-68736484 | Msa0618020:CDS | 40.0% | |
| ! | GGACCCTTCAAATTTTACAC+CGG | + | chr4_2:68736525-68736544 | Msa0618020:CDS | 40.0% |
| GAGAATAGTACCATGACATG+GGG | - | chr4_2:68736579-68736598 | None:intergenic | 40.0% | |
| !!! | TTTTCTCCAATTTCTGGAGC+TGG | - | chr4_2:68736722-68736741 | None:intergenic | 40.0% |
| !! | TGTAGGCCCTTTTTGGAAAT+TGG | + | chr4_2:68736820-68736839 | Msa0618020:three_prime_UTR | 40.0% |
| TTAGTCATGCAATTCAAGCG+GGG | + | chr4_2:68736880-68736899 | Msa0618020:three_prime_UTR | 40.0% | |
| TTACGAATCAGAGAATCCCA+AGG | + | chr4_2:68737192-68737211 | Msa0618020:intron | 40.0% | |
| GATTCTCCTATGAGTCTCTA+TGG | - | chr4_2:68737276-68737295 | None:intergenic | 40.0% | |
| !!! | TTCCCCATTTTGAGTTTGAG+GGG | - | chr4_2:68737456-68737475 | None:intergenic | 40.0% |
| !! | AGCTTGTTGGGCTTCAATAT+TGG | - | chr4_2:68737596-68737615 | None:intergenic | 40.0% |
| ! | CAGATTTTCACATTGGGTCA+GGG | - | chr4_2:68737626-68737645 | None:intergenic | 40.0% |
| ! | TCAGATTTTCACATTGGGTC+AGG | - | chr4_2:68737627-68737646 | None:intergenic | 40.0% |
| ! | TTTAGAGCTTTGGCTATGAG+AGG | - | chr4_2:68737651-68737670 | None:intergenic | 40.0% |
| !!! | ATAAGCTGTTTTGGTGCAGA+AGG | - | chr4_2:68737739-68737758 | None:intergenic | 40.0% |
| !! | GCTTCAGATTTGCTGTTATG+AGG | - | chr4_2:68737901-68737920 | None:intergenic | 40.0% |
| !! | TGAAGAAGCTTTTGAGAGCA+AGG | - | chr4_2:68738138-68738157 | None:intergenic | 40.0% |
| TCGTTTCTTTCTGCTTGGTT+TGG | - | chr4_2:68738180-68738199 | None:intergenic | 40.0% | |
| !! | TGGAGCGTTTTCTTTGATTC+TGG | - | chr4_2:68738325-68738344 | None:intergenic | 40.0% |
| AATCAAAGAAAACGCTCCAC+CGG | + | chr4_2:68738326-68738345 | Msa0618020:intron | 40.0% | |
| GTCGACAAATCAAGGAAAGA+GGG | - | chr4_2:68738476-68738495 | None:intergenic | 40.0% | |
| ATCTGAATCTGTTACGGTGA+CGG | - | chr4_2:68738586-68738605 | None:intergenic | 40.0% | |
| TGGAAACACTGGAATAGCAT+CGG | + | chr4_2:68738677-68738696 | Msa0618020:intron | 40.0% | |
| AACCGAAACTTCATCCTCAT+CGG | + | chr4_2:68738863-68738882 | Msa0618020:intron | 40.0% | |
| TTCCGATGAGGATGAAGTTT+CGG | - | chr4_2:68738868-68738887 | None:intergenic | 40.0% | |
| ATCCTCATCGGAATCTTCAA+CGG | + | chr4_2:68738875-68738894 | Msa0618020:intron | 40.0% | |
| ! | GGATTCTCTGATTCGTAACA+TGG | - | chr4_2:68737190-68737209 | None:intergenic | 40.0% |
| TTACGAATCAGAGAATCCCA+AGG | + | chr4_2:68737192-68737211 | Msa0618020:intron | 40.0% | |
| GATTCTCCTATGAGTCTCTA+TGG | - | chr4_2:68737276-68737295 | None:intergenic | 40.0% | |
| TTCTTCTCGTCTCCCATTGT+TGG | - | chr4_2:68732323-68732342 | None:intergenic | 45.0% | |
| ! | TTGACGAAAGGCTTGATGGT+TGG | - | chr4_2:68732374-68732393 | None:intergenic | 45.0% |
| ACCATCAAGCCTTTCGTCAA+TGG | + | chr4_2:68732374-68732393 | Msa0618020:CDS | 45.0% | |
| ACCATTGACGAAAGGCTTGA+TGG | - | chr4_2:68732378-68732397 | None:intergenic | 45.0% | |
| ATCAAGCCTTTCGTCAATGG+TGG | + | chr4_2:68732377-68732396 | Msa0618020:CDS | 45.0% | |
| GTTAGGATTCAACTGGGTCA+AGG | + | chr4_2:68732561-68732580 | Msa0618020:CDS | 45.0% | |
| !! | GGGTGTTGGTGCTTTCTATA+AGG | + | chr4_2:68732623-68732642 | Msa0618020:CDS | 45.0% |
| !! | AGCTTTTTGGTAGAGTGGCA+GGG | - | chr4_2:68733355-68733374 | None:intergenic | 45.0% |
| ! | TCAGCCCACATAGAGCTTTT+TGG | - | chr4_2:68733368-68733387 | None:intergenic | 45.0% |
| !! | AGTTGGTAGTCCAGCTGATT+TGG | + | chr4_2:68733410-68733429 | Msa0618020:CDS | 45.0% |
| TTTGGCACTCATTCGTATGC+AGG | + | chr4_2:68733428-68733447 | Msa0618020:CDS | 45.0% | |
| !! | GGAAGGCGTTTGTGTAGTTT+CGG | - | chr4_2:68733482-68733501 | None:intergenic | 45.0% |
| AAACTACACAAACGCCTTCC+AGG | + | chr4_2:68733482-68733501 | Msa0618020:CDS | 45.0% | |
| TTCCAGGCACTTTACCGTAT+CGG | + | chr4_2:68733498-68733517 | Msa0618020:CDS | 45.0% | |
| GGGATTCTTTCACTGTGGAA+AGG | + | chr4_2:68733531-68733550 | Msa0618020:intron | 45.0% | |
| !! | TTTCACTGTGGAAAGGTGCT+GGG | + | chr4_2:68733538-68733557 | Msa0618020:intron | 45.0% |
| ! | AAGAGCCATGGCATTGAACA+TGG | + | chr4_2:68733572-68733591 | Msa0618020:CDS | 45.0% |
| ! | AGAGCCATGGCATTGAACAT+GGG | + | chr4_2:68733573-68733592 | Msa0618020:CDS | 45.0% |
| GAGTTCTTCAAGGATACCGT+TGG | + | chr4_2:68733624-68733643 | Msa0618020:CDS | 45.0% | |
| ! | TTCAAGGATACCGTTGGTCT+AGG | + | chr4_2:68733630-68733649 | Msa0618020:CDS | 45.0% |
| GGTGAAATGACTACTGTGGT+TGG | + | chr4_2:68733651-68733670 | Msa0618020:CDS | 45.0% | |
| !! | CTCCTTAACTTGTGCCCTAA+GGG | + | chr4_2:68733965-68733984 | Msa0618020:intron | 45.0% |
| ACTTTGCTGAAGGGATTGAG+TGG | + | chr4_2:68734376-68734395 | Msa0618020:intron | 45.0% | |
| GTGGTGTAAAGGAAATAGGG+AGG | - | chr4_2:68734534-68734553 | None:intergenic | 45.0% | |
| !! | TCACTCTCTAGCTAGCTTTC+TGG | + | chr4_2:68734605-68734624 | Msa0618020:intron | 45.0% |
| GAATTGAACTAGGTCTGGCT+TGG | - | chr4_2:68734957-68734976 | None:intergenic | 45.0% | |
| AGCATCACTGTTATTCGAGG+CGG | + | chr4_2:68735212-68735231 | Msa0618020:intron | 45.0% | |
| CTTTATGCACACCCAAGAGA+TGG | + | chr4_2:68735996-68736015 | Msa0618020:intron | 45.0% | |
| AAAGATGCAACCTGATGCTG+AGG | + | chr4_2:68736446-68736465 | Msa0618020:CDS | 45.0% | |
| AAGATGCAACCTGATGCTGA+GGG | + | chr4_2:68736447-68736466 | Msa0618020:CDS | 45.0% | |
| ! | GGATATTTTCCCTCAGCATC+AGG | - | chr4_2:68736459-68736478 | None:intergenic | 45.0% |
| GCTGTCAAGACCTTCAAATC+TGG | + | chr4_2:68736501-68736520 | Msa0618020:CDS | 45.0% | |
| GTCAAGACCTTCAAATCTGG+AGG | + | chr4_2:68736504-68736523 | Msa0618020:CDS | 45.0% | |
| CAATCCTGACACAGTAGACA+GGG | - | chr4_2:68736554-68736573 | None:intergenic | 45.0% | |
| ACTGCTTATGGCAGATGACA+TGG | + | chr4_2:68736685-68736704 | Msa0618020:intron | 45.0% | |
| AATAGTCATAGTGATCCGCG+AGG | + | chr4_2:68737217-68737236 | Msa0618020:intron | 45.0% | |
| AGTGCATGGCGATATTCATG+AGG | + | chr4_2:68737243-68737262 | Msa0618020:intron | 45.0% | |
| AGTCCCCCTCAAACTCAAAA+TGG | + | chr4_2:68737449-68737468 | Msa0618020:intron | 45.0% | |
| GTCCCCCTCAAACTCAAAAT+GGG | + | chr4_2:68737450-68737469 | Msa0618020:intron | 45.0% | |
| TCCCCCTCAAACTCAAAATG+GGG | + | chr4_2:68737451-68737470 | Msa0618020:intron | 45.0% | |
| !!! | TCCCCATTTTGAGTTTGAGG+GGG | - | chr4_2:68737455-68737474 | None:intergenic | 45.0% |
| GAAGCGCATTTGCATTAAGC+TGG | - | chr4_2:68737795-68737814 | None:intergenic | 45.0% | |
| GAATCAAATGCACAGCACCA+CGG | + | chr4_2:68737851-68737870 | Msa0618020:intron | 45.0% | |
| ! | TTTCCTGCAAAAGCACGTTG+TGG | - | chr4_2:68737937-68737956 | None:intergenic | 45.0% |
| AGCTTCTGTAACAGCGTGTA+TGG | + | chr4_2:68738206-68738225 | Msa0618020:intron | 45.0% | |
| ATCAAAGAAAACGCTCCACC+GGG | + | chr4_2:68738327-68738346 | Msa0618020:intron | 45.0% | |
| TCGGATTTCGTATTCGATCC+CGG | - | chr4_2:68738348-68738367 | None:intergenic | 45.0% | |
| TGTCACACGCTTCAGTTGTT+CGG | - | chr4_2:68738367-68738386 | None:intergenic | 45.0% | |
| TGCTTACACAACCACCTCTA+TGG | - | chr4_2:68738412-68738431 | None:intergenic | 45.0% | |
| ATTGCAACACCATTGCAGCT+AGG | + | chr4_2:68738448-68738467 | Msa0618020:intron | 45.0% | |
| CGTCGACAAATCAAGGAAAG+AGG | - | chr4_2:68738477-68738496 | None:intergenic | 45.0% | |
| TCTGCGATCGTGTATCAATG+TGG | - | chr4_2:68738525-68738544 | None:intergenic | 45.0% | |
| ! | GAAGGTGTAATCGTCGTGAT+TGG | + | chr4_2:68738657-68738676 | Msa0618020:intron | 45.0% |
| ATCGTCGTGATTGGAAACAC+TGG | + | chr4_2:68738666-68738685 | Msa0618020:intron | 45.0% | |
| TTCCGTTGAAGATTCCGATG+AGG | - | chr4_2:68738880-68738899 | None:intergenic | 45.0% | |
| TCGTCATCATCTTCATCCCT+AGG | + | chr4_2:68738903-68738922 | Msa0618020:intron | 45.0% | |
| CGTCATCATCTTCATCCCTA+GGG | + | chr4_2:68738904-68738923 | Msa0618020:intron | 45.0% | |
| AATAGTCATAGTGATCCGCG+AGG | + | chr4_2:68737217-68737236 | Msa0618020:intron | 45.0% | |
| AGTGCATGGCGATATTCATG+AGG | + | chr4_2:68737243-68737262 | Msa0618020:intron | 45.0% | |
| !!! | TAATTTATTCTTTTATAAAA+GGG | - | chr4_2:68734006-68734025 | None:intergenic | 5.0% |
| !!! | TTTTTATGTATTTTTTAATT+TGG | + | chr4_2:68737127-68737146 | Msa0618020:three_prime_UTR | 5.0% |
| !!! | TTTTATGTATTTTTTAATTT+GGG | + | chr4_2:68737128-68737147 | Msa0618020:three_prime_UTR | 5.0% |
| AAACCAGCAGCAACAGGCTT+AGG | - | chr4_2:68732347-68732366 | None:intergenic | 50.0% | |
| ! | GAAGCACCACCATTGACGAA+AGG | - | chr4_2:68732386-68732405 | None:intergenic | 50.0% |
| ! | TTCGTCAATGGTGGTGCTTC+TGG | + | chr4_2:68732386-68732405 | Msa0618020:CDS | 50.0% |
| TTCTTGCAGGGTCTATCAGC+TGG | + | chr4_2:68732943-68732962 | Msa0618020:intron | 50.0% | |
| TCTTGCAGGGTCTATCAGCT+GGG | + | chr4_2:68732944-68732963 | Msa0618020:intron | 50.0% | |
| GTCTATCAGCTGGGTTACTC+AGG | + | chr4_2:68732953-68732972 | Msa0618020:CDS | 50.0% | |
| AAATGTTCCAAGGCGTGCAG+TGG | - | chr4_2:68732992-68733011 | None:intergenic | 50.0% | |
| CTGCACGCCTTGGAACATTT+AGG | + | chr4_2:68732992-68733011 | Msa0618020:CDS | 50.0% | |
| !! | GCTTTTTGGTAGAGTGGCAG+GGG | - | chr4_2:68733354-68733373 | None:intergenic | 50.0% |
| !! | GAGCTTTTTGGTAGAGTGGC+AGG | - | chr4_2:68733356-68733375 | None:intergenic | 50.0% |
| GGTGCAATTGGAGCAACAGT+TGG | + | chr4_2:68733393-68733412 | Msa0618020:CDS | 50.0% | |
| CGAATGAGTGCCAAATCAGC+TGG | - | chr4_2:68733423-68733442 | None:intergenic | 50.0% | |
| ! | GATACGGTAAAGTGCCTGGA+AGG | - | chr4_2:68733499-68733518 | None:intergenic | 50.0% |
| ! | TACCGTATCGGTGCAGATGA+AGG | + | chr4_2:68733510-68733529 | Msa0618020:intron | 50.0% |
| ! | ACCGTATCGGTGCAGATGAA+GGG | + | chr4_2:68733511-68733530 | Msa0618020:intron | 50.0% |
| ! | TCCCTTCATCTGCACCGATA+CGG | - | chr4_2:68733515-68733534 | None:intergenic | 50.0% |
| ! | CTTTCACTGTGGAAAGGTGC+TGG | + | chr4_2:68733537-68733556 | Msa0618020:intron | 50.0% |
| GCCTACTGTAGTAAGAGCCA+TGG | + | chr4_2:68733560-68733579 | Msa0618020:CDS | 50.0% | |
| GCCATGGCTCTTACTACAGT+AGG | - | chr4_2:68733564-68733583 | None:intergenic | 50.0% | |
| ! | GAGCCATGGCATTGAACATG+GGG | + | chr4_2:68733574-68733593 | Msa0618020:CDS | 50.0% |
| CATCCCCATGTTCAATGCCA+TGG | - | chr4_2:68733580-68733599 | None:intergenic | 50.0% | |
| !! | GCTCCTTAACTTGTGCCCTA+AGG | + | chr4_2:68733964-68733983 | Msa0618020:intron | 50.0% |
| TGCCCTTAGGGCACAAGTTA+AGG | - | chr4_2:68733970-68733989 | None:intergenic | 50.0% | |
| ! | GTACTGAGTTGAGTAGGCAC+AGG | + | chr4_2:68735308-68735327 | Msa0618020:intron | 50.0% |
| AGTTGAGTAGGCACAGGAGT+TGG | + | chr4_2:68735314-68735333 | Msa0618020:intron | 50.0% | |
| GAAGGGTCCTCCAGATTTGA+AGG | - | chr4_2:68736514-68736533 | None:intergenic | 50.0% | |
| GACACAGTAGACAGGGAATC+CGG | - | chr4_2:68736547-68736566 | None:intergenic | 50.0% | |
| GATTCCCTGTCTACTGTGTC+AGG | + | chr4_2:68736547-68736566 | Msa0618020:CDS | 50.0% | |
| GCAATCCTGACACAGTAGAC+AGG | - | chr4_2:68736555-68736574 | None:intergenic | 50.0% | |
| !! | CCAATTTCTGGAGCTGGTTG+AGG | - | chr4_2:68736716-68736735 | None:intergenic | 50.0% |
| CCTCAACCAGCTCCAGAAAT+TGG | + | chr4_2:68736713-68736732 | Msa0618020:CDS | 50.0% | |
| ! | GCTGTGTTGTAGGCCCTTTT+TGG | + | chr4_2:68736813-68736832 | Msa0618020:three_prime_UTR | 50.0% |
| ! | CAGGGCTTCATCAGCTTGTT+GGG | - | chr4_2:68737608-68737627 | None:intergenic | 50.0% |
| TCAGGGCTTCATCAGCTTGT+TGG | - | chr4_2:68737609-68737628 | None:intergenic | 50.0% | |
| AATGCACAGCACCACGGAAA+AGG | + | chr4_2:68737857-68737876 | Msa0618020:intron | 50.0% | |
| ! | TCTCCACAACGTGCTTTTGC+AGG | + | chr4_2:68737931-68737950 | Msa0618020:intron | 50.0% |
| ATCACATCCCTTCCCGTTTG+TGG | - | chr4_2:68738278-68738297 | None:intergenic | 50.0% | |
| GATTTCGTATTCGATCCCGG+TGG | - | chr4_2:68738345-68738364 | None:intergenic | 50.0% | |
| ! | TTGCAATCGTCTGAGACGAC+GGG | - | chr4_2:68738435-68738454 | None:intergenic | 50.0% |
| ! | GTTGCAATCGTCTGAGACGA+CGG | - | chr4_2:68738436-68738455 | None:intergenic | 50.0% |
| CTCGTGTCGTCGACAAATCA+AGG | - | chr4_2:68738484-68738503 | None:intergenic | 50.0% | |
| GAGGAGCTCAATTCTGCAGA+AGG | + | chr4_2:68738762-68738781 | Msa0618020:intron | 50.0% | |
| GGTATCAGAGCGATACCCTA+GGG | - | chr4_2:68738922-68738941 | None:intergenic | 50.0% | |
| TGGTATCAGAGCGATACCCT+AGG | - | chr4_2:68738923-68738942 | None:intergenic | 50.0% | |
| AAGCCTAAGCCTGTTGCTGC+TGG | + | chr4_2:68732341-68732360 | Msa0618020:CDS | 55.0% | |
| !! | AGCCTGTTGCTGCTGGTTTC+TGG | + | chr4_2:68732348-68732367 | Msa0618020:CDS | 55.0% |
| ATCAGCTGGGTTACTCAGGC+AGG | + | chr4_2:68732957-68732976 | Msa0618020:CDS | 55.0% | |
| ACTTACACCACTGCACGCCT+TGG | + | chr4_2:68732982-68733001 | Msa0618020:CDS | 55.0% | |
| ! | TAGTTTCGGCGCTGAGCAAG+AGG | - | chr4_2:68733468-68733487 | None:intergenic | 55.0% |
| ! | CACCGATACGGTAAAGTGCC+TGG | - | chr4_2:68733503-68733522 | None:intergenic | 55.0% |
| CAGTCAAGAGAGCCGGTGTA+TGG | - | chr4_2:68736480-68736499 | None:intergenic | 55.0% | |
| GACAGCACAGTCAAGAGAGC+CGG | - | chr4_2:68736487-68736506 | None:intergenic | 55.0% | |
| CAGGATTGCTCCCCATGTCA+TGG | + | chr4_2:68736566-68736585 | Msa0618020:CDS | 55.0% | |
| CTTTCTTGCCGCGATCCCAA+GGG | + | chr4_2:68738247-68738266 | Msa0618020:intron | 55.0% | |
| !! | CCGTTTGTGGTGGATCCCTT+GGG | - | chr4_2:68738265-68738284 | None:intergenic | 55.0% |
| CCCAAGGGATCCACCACAAA+CGG | + | chr4_2:68738262-68738281 | Msa0618020:intron | 55.0% | |
| CCAAGGGATCCACCACAAAC+GGG | + | chr4_2:68738263-68738282 | Msa0618020:intron | 55.0% | |
| GGATCCACCACAAACGGGAA+GGG | + | chr4_2:68738268-68738287 | Msa0618020:intron | 55.0% | |
| ACATCCCTTCCCGTTTGTGG+TGG | - | chr4_2:68738275-68738294 | None:intergenic | 55.0% | |
| !! | AAGAGGGCACCTAGCTGCAA+TGG | - | chr4_2:68738460-68738479 | None:intergenic | 55.0% |
| GGCCAGAAACCAGCAGCAAC+AGG | - | chr4_2:68732353-68732372 | None:intergenic | 60.0% | |
| TGGCAGGGGCTTGCCATCAT+TGG | - | chr4_2:68733340-68733359 | None:intergenic | 60.0% | |
| ! | GCTCTATGTGGGCTGACTGC+TGG | + | chr4_2:68733372-68733391 | Msa0618020:CDS | 60.0% |
| GGGCTGACTGCTGGTGCAAT+TGG | + | chr4_2:68733381-68733400 | Msa0618020:CDS | 60.0% | |
| ! | GATCCGCGAGGAAGAGTGCA+TGG | + | chr4_2:68737229-68737248 | Msa0618020:intron | 60.0% |
| TCGCCATGCACTCTTCCTCG+CGG | - | chr4_2:68737235-68737254 | None:intergenic | 60.0% | |
| CCTTGGGATCGCGGCAAGAA+AGG | - | chr4_2:68738249-68738268 | None:intergenic | 60.0% | |
| CCTTTCTTGCCGCGATCCCA+AGG | + | chr4_2:68738246-68738265 | Msa0618020:intron | 60.0% | |
| ! | TGGTGGATCCCTTGGGATCG+CGG | - | chr4_2:68738258-68738277 | None:intergenic | 60.0% |
| !! | CCCGTTTGTGGTGGATCCCT+TGG | - | chr4_2:68738266-68738285 | None:intergenic | 60.0% |
| GGGATCCACCACAAACGGGA+AGG | + | chr4_2:68738267-68738286 | Msa0618020:intron | 60.0% | |
| ! | GATCCGCGAGGAAGAGTGCA+TGG | + | chr4_2:68737229-68737248 | Msa0618020:intron | 60.0% |
| TCGCCATGCACTCTTCCTCG+CGG | - | chr4_2:68737235-68737254 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 68732051 | 68739315 | 68732051 | ID=Msa0618020;Name=Msa0618020 |
| chr4_2 | mRNA | 68732051 | 68739315 | 68732051 | ID=Msa0618020-mRNA-1;Parent=Msa0618020;Name=Msa0618020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=275|0.85|0.75|1|0.71|0.5|8|542|290 |
| chr4_2 | exon | 68732051 | 68732451 | 68732051 | ID=Msa0618020-mRNA-1:exon:19780;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68732561 | 68732644 | 68732561 | ID=Msa0618020-mRNA-1:exon:19781;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68732952 | 68733013 | 68732952 | ID=Msa0618020-mRNA-1:exon:19782;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68733311 | 68733519 | 68733311 | ID=Msa0618020-mRNA-1:exon:19783;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68733553 | 68733672 | 68733553 | ID=Msa0618020-mRNA-1:exon:19784;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68736373 | 68736587 | 68736373 | ID=Msa0618020-mRNA-1:exon:19785;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68736699 | 68737185 | 68736699 | ID=Msa0618020-mRNA-1:exon:19786;Parent=Msa0618020-mRNA-1 |
| chr4_2 | exon | 68739204 | 68739315 | 68739204 | ID=Msa0618020-mRNA-1:exon:19787;Parent=Msa0618020-mRNA-1 |
| chr4_2 | five_prime_UTR | 68732051 | 68732325 | 68732051 | ID=Msa0618020-mRNA-1:five_prime_utr;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68732326 | 68732451 | 68732326 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68732561 | 68732644 | 68732561 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68732952 | 68733013 | 68732952 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68733311 | 68733519 | 68733311 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68733553 | 68733672 | 68733553 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68736373 | 68736587 | 68736373 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | CDS | 68736699 | 68736755 | 68736699 | ID=Msa0618020-mRNA-1:cds;Parent=Msa0618020-mRNA-1 |
| chr4_2 | three_prime_UTR | 68736756 | 68737185 | 68736756 | ID=Msa0618020-mRNA-1:three_prime_utr;Parent=Msa0618020-mRNA-1 |
| chr4_2 | three_prime_UTR | 68739204 | 68739315 | 68739204 | ID=Msa0618020-mRNA-1:three_prime_utr;Parent=Msa0618020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
