AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050920 MtrunA17_Chr7g0220261 87.471 431 32 3 55 484 10 419 1.07e-163 469
Msa1050920 MtrunA17_Chr6g0455531 61.728 162 55 4 25 182 31 189 2.14e-50 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050920 AT5G15780.1 55.294 170 70 4 3 168 10 177 4.45e-45 162

Find 139 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTTGTAATGGATTATT+AGG 0.139809 7_2:-17123497 None:intergenic
GGTGGTTGTAATGGATTATT+AGG 0.139809 7_2:-17123869 None:intergenic
GGTGGTTGTGGTGGATTATT+AGG 0.195797 7_2:-17123620 None:intergenic
GGTGGCTGAAATGGATTATT+AGG 0.210524 7_2:-17123947 None:intergenic
CAAGAAACCAAGACATTCTA+AGG 0.247032 7_2:-17122068 None:intergenic
ATGGGAAATCATTTCATTTC+AGG 0.252182 7_2:+17122225 Msa1050920:CDS
TTTACTTGTTTCTTGAATCT+TGG 0.256375 7_2:-17122897 None:intergenic
GGGACTAATGGTGGTGGATT+AGG 0.268729 7_2:-17123599 None:intergenic
GGTGGTTGTAATGGATTATT+AGG 0.271477 7_2:-17123566 None:intergenic
AATATTGGTGTAAGAATTTC+AGG 0.284581 7_2:-17123308 None:intergenic
AAAGGAATTGTTGGATGAAA+TGG 0.298027 7_2:-17123665 None:intergenic
TTAGGAATTGTTGGTGTACT+TGG 0.298601 7_2:-17123890 None:intergenic
GTTGGAGTTGGTGGTTGAAA+TGG 0.312145 7_2:-17123914 None:intergenic
GTGGTTGTGGTGGATTATTA+GGG 0.334233 7_2:-17123619 None:intergenic
CATAGATTTGGTTGTTTAAG+TGG 0.335597 7_2:-17123125 None:intergenic
GACAATTCTGGTGGCAATAT+TGG 0.339985 7_2:-17123323 None:intergenic
TTGGAGTTGGTGGTTGAAAT+GGG 0.340519 7_2:-17123913 None:intergenic
TGGATTAGGAGGAAGGTTAA+AGG 0.341986 7_2:-17123825 None:intergenic
ACAATATCTTATATACTATA+TGG 0.349238 7_2:-17122023 None:intergenic
GGACTAATGGTGGTGGATTA+GGG 0.370117 7_2:-17123598 None:intergenic
CCTGATGGAGGTGGCTGAAA+TGG 0.373008 7_2:-17123956 None:intergenic
GGGATTAGTGGTGACAATTC+TGG 0.374287 7_2:-17123335 None:intergenic
GGAAGAATTTGATGTAATAA+AGG 0.381012 7_2:-17123683 None:intergenic
GGTGGATTATTAGGGACTAA+TGG 0.383033 7_2:-17123611 None:intergenic
GGTGTACTTGGTGGTTGTAA+TGG 0.395161 7_2:-17123878 None:intergenic
ACTAATGGTGTTGGAGTTGG+TGG 0.405016 7_2:-17123923 None:intergenic
AATGGATTATTAGGGACTAA+TGG 0.406439 7_2:-17123488 None:intergenic
AATGGATTATTAGGAACTAA+TGG 0.406439 7_2:-17123557 None:intergenic
AATGGATTATTAGGGACTAA+TGG 0.406439 7_2:-17123860 None:intergenic
GTGGTTGTAATGGATTATTA+GGG 0.406491 7_2:-17123496 None:intergenic
GTGGTTGTAATGGATTATTA+GGG 0.406491 7_2:-17123868 None:intergenic
GGGACTAATGGTGACAATAT+TGG 0.408374 7_2:-17123707 None:intergenic
GGGTTTGGATCTTGAAGTGG+GGG 0.411587 7_2:-17123242 None:intergenic
GCCTTTCCACTAGGGACTAA+TGG 0.415954 7_2:-17123719 None:intergenic
TGATGTAATAAAGGAATTGT+TGG 0.420725 7_2:-17123674 None:intergenic
ACATGTTTGCTCACTGAGAA+TGG 0.424602 7_2:-17122954 None:intergenic
TGTGGTGTACTTGGTGGTTG+TGG 0.424625 7_2:-17123632 None:intergenic
GGAGGGAATAGTGGAGGAAA+AGG 0.424904 7_2:-17124061 None:intergenic
TTAGGAATAGTTGGTGTACT+TGG 0.427639 7_2:-17123518 None:intergenic
GTCATTCCACTAGGGATTAG+TGG 0.431829 7_2:-17123347 None:intergenic
AGAAATATTCTTTGTAGAAG+CGG 0.438431 7_2:-17124104 None:intergenic
GGGGTTTGGATCTTGAAGTG+GGG 0.440503 7_2:-17123243 None:intergenic
GAGGAAGGTTAAAGGAATCA+AGG 0.440757 7_2:-17123817 None:intergenic
CCTCTTTCTGCTGTTGTGGT+TGG 0.441706 7_2:+17122162 Msa1050920:CDS
CTGCCAGGTGGAGGGAATAG+TGG 0.443809 7_2:-17124070 None:intergenic
GGTGTACTTGGTGGTTGTAA+TGG 0.446794 7_2:-17123506 None:intergenic
ACTAATGGTGGTGGTTGAAA+TGG 0.448499 7_2:-17123542 None:intergenic
GCTGAGGCTATAGAACAAAA+TGG 0.449700 7_2:-17123023 None:intergenic
GAAATATTCTTTGTAGAAGC+GGG 0.452227 7_2:-17124103 None:intergenic
ACTAATGTTGGTGGTTGTAA+TGG 0.452664 7_2:-17123575 None:intergenic
GGTGTGCCACTGCCAGGTGG+AGG 0.456151 7_2:-17124079 None:intergenic
ATTTCAGGTGCTAAAGGAAC+TGG 0.456654 7_2:-17123293 None:intergenic
AATGGATTATTAGGGACTAA+TGG 0.457185 7_2:-17123938 None:intergenic
GGTGGTGGTTGAAATGGATT+AGG 0.459525 7_2:-17123536 None:intergenic
GCGGGAGGTGTGCCACTGCC+AGG 0.459906 7_2:-17124085 None:intergenic
TATTGTAGACCCTCTGTAAG+AGG 0.463336 7_2:+17122040 Msa1050920:five_prime_UTR
GGAATTGTTGGTGTACTTGG+TGG 0.463583 7_2:-17123887 None:intergenic
TGAAATGGGTTAGGAATTGT+TGG 0.469104 7_2:-17123899 None:intergenic
ACCTTCATCACCACCAGGAT+TGG 0.469818 7_2:+17124033 Msa1050920:CDS
ATTGTTGGATGAAATGGATC+AGG 0.474568 7_2:-17123659 None:intergenic
GGGACTAATGGTGTTGGAGT+TGG 0.475306 7_2:-17123926 None:intergenic
GGACAAACCTTAGAATGTCT+TGG 0.476684 7_2:+17122061 Msa1050920:exon
GAAGCCTCTTTCTGCTGTTG+TGG 0.476820 7_2:+17122158 Msa1050920:CDS
GTTGGTGGTTGAAATGGGTT+AGG 0.478394 7_2:-17123908 None:intergenic
TGAAATGGATTAGGAATAGT+TGG 0.478986 7_2:-17123527 None:intergenic
GTGGCTGAAATGGATTATTA+GGG 0.480817 7_2:-17123946 None:intergenic
GTAAGAATTTCAGGTGCTAA+AGG 0.488289 7_2:-17123299 None:intergenic
GGTGATGAAGGTGGTGGTGA+AGG 0.493855 7_2:-17124022 None:intergenic
CCATTTCAGCCACCTCCATC+AGG 0.494064 7_2:+17123956 Msa1050920:CDS
TTATTAGGGACTAATGGTGT+TGG 0.497525 7_2:-17123932 None:intergenic
GGACTACACATATTCTCAGC+AGG 0.499641 7_2:+17123086 Msa1050920:CDS
TCATCACTAGCCTTTCCACT+AGG 0.500789 7_2:-17123728 None:intergenic
TTTCAACAGGATTTCTCCAT+GGG 0.503608 7_2:+17122207 Msa1050920:CDS
AAGGTTTGTCCTCTTACAGA+GGG 0.507505 7_2:-17122049 None:intergenic
TCAGGAGAATGTGGTGTACT+TGG 0.511280 7_2:-17123641 None:intergenic
CCTCCACTATTCCCTCCACC+TGG 0.514912 7_2:+17124067 Msa1050920:CDS
CTATTCCCTCCACCTGGCAG+TGG 0.517026 7_2:+17124073 Msa1050920:CDS
GTTGAAGTAGAATGCAAAGA+TGG 0.517678 7_2:+17122858 Msa1050920:CDS
AAACCTGGTACCGACGGAAA+AGG 0.517768 7_2:-17123995 None:intergenic
GGTGGATTAGGGACTAATGT+TGG 0.520712 7_2:-17123587 None:intergenic
GGTGTACTTGGTGGTTGTGG+TGG 0.522140 7_2:-17123629 None:intergenic
AGGTTAAAGGAATCAAGGTT+AGG 0.523474 7_2:-17123812 None:intergenic
GGATTAGGGACTAATGTTGG+TGG 0.526498 7_2:-17123584 None:intergenic
GAGGAATGTGAAAAGTATCA+AGG 0.529046 7_2:-17123445 None:intergenic
GGAAAGGAAGAACACCACTA+GGG 0.536488 7_2:-17123265 None:intergenic
TCTTCATTAGTCATTCCACT+AGG 0.540107 7_2:-17123356 None:intergenic
TGCTCACTGAGAATGGAAGT+TGG 0.540570 7_2:-17122947 None:intergenic
GCCAATCCTGGTGGTGATGA+AGG 0.544784 7_2:-17124034 None:intergenic
TTTGTGTTTCGATCAACACT+TGG 0.550285 7_2:-17123158 None:intergenic
TTATTAGGGACTAATGGTGG+TGG 0.550341 7_2:-17123605 None:intergenic
AAAGGAACTGGTGGGAGGAA+AGG 0.551997 7_2:-17123281 None:intergenic
GGAATAGTTGGTGTACTTGG+TGG 0.552196 7_2:-17123515 None:intergenic
CCAACCACAACAGCAGAAAG+AGG 0.559072 7_2:-17122162 None:intergenic
GTGTGCCACTGCCAGGTGGA+GGG 0.559172 7_2:-17124078 None:intergenic
TGAAATGAAATGATTTCCCA+TGG 0.561319 7_2:-17122223 None:intergenic
CATCACTAGCCTTTCCACTA+GGG 0.562196 7_2:-17123727 None:intergenic
GGAAAAGGAAAAGCCAATCC+TGG 0.562759 7_2:-17124046 None:intergenic
CACCTAAAATCAAGAAAACA+AGG 0.564101 7_2:+17123065 Msa1050920:CDS
TAAGGTTTGTCCTCTTACAG+AGG 0.567323 7_2:-17122050 None:intergenic
TTATTAGGGACTAATGGTGG+TGG 0.568223 7_2:-17123854 None:intergenic
CTTCATTAGTCATTCCACTA+GGG 0.568615 7_2:-17123355 None:intergenic
GTCAATATTAAAGATAAAGA+GGG 0.577065 7_2:+17121983 None:intergenic
AAACATGTAAGAAGAATCAA+AGG 0.580509 7_2:+17122969 Msa1050920:CDS
CCACCACCTTCATCACCACC+AGG 0.581200 7_2:+17124028 Msa1050920:CDS
TTATTAGGGACTAATGGTGG+TGG 0.585262 7_2:-17123482 None:intergenic
TCAGGTGCTAAAGGAACTGG+TGG 0.587525 7_2:-17123290 None:intergenic
TGATGAAGATGAGGCTGCTG+AGG 0.589656 7_2:-17123039 None:intergenic
TATTAGGGACTAATGGTGGT+GGG 0.590783 7_2:-17123481 None:intergenic
ACCATTAGTCCCTAGTGGAA+AGG 0.590966 7_2:+17123718 Msa1050920:CDS
ACTAATGGTGACAATATTGG+TGG 0.598479 7_2:-17123704 None:intergenic
AGGAAAGGAAGAACACCACT+AGG 0.607599 7_2:-17123266 None:intergenic
GAAAGGAAGAACACCACTAG+GGG 0.611858 7_2:-17123264 None:intergenic
TTATTAGGAACTAATGGTGG+TGG 0.613397 7_2:-17123551 None:intergenic
GGACTTAAACCTGGTACCGA+CGG 0.615702 7_2:-17124001 None:intergenic
GGAGAATGTGGTGTACTTGG+TGG 0.617294 7_2:-17123638 None:intergenic
GACTACACATATTCTCAGCA+GGG 0.621333 7_2:+17123087 Msa1050920:CDS
GGATTATTAGGAACTAATGG+TGG 0.626184 7_2:-17123554 None:intergenic
TGAAATGGATCAGGAGAATG+TGG 0.628708 7_2:-17123650 None:intergenic
GGATTATTAGGGACTAATGG+TGG 0.630974 7_2:-17123485 None:intergenic
GGATTATTAGGGACTAATGG+TGG 0.630974 7_2:-17123857 None:intergenic
TTGTCACCATTAGTCCCTAG+TGG 0.632443 7_2:+17123713 Msa1050920:CDS
GGTGATGATCCTGATGGAGG+TGG 0.635840 7_2:-17123965 None:intergenic
GGATTATTAGGGACTAATGG+TGG 0.637602 7_2:-17123608 None:intergenic
CCTGGTGGTGATGAAGGTGG+TGG 0.644332 7_2:-17124028 None:intergenic
ATATTCTTTGTAGAAGCGGG+AGG 0.645103 7_2:-17124100 None:intergenic
CCAGGTGGAGGGAATAGTGG+AGG 0.652970 7_2:-17124067 None:intergenic
TAGGTGAAGTGATGAAGATG+AGG 0.654303 7_2:-17123048 None:intergenic
GGTGGTGAAGGACTTAAACC+TGG 0.654328 7_2:-17124010 None:intergenic
TTGTCACCACTAATCCCTAG+TGG 0.656373 7_2:+17123341 Msa1050920:CDS
ACCGACGGAAAAGGAAACAA+TGG 0.656858 7_2:-17123986 None:intergenic
AAGGAAGAACACCACTAGGG+GGG 0.663476 7_2:-17123262 None:intergenic
GTGCTAAAGGAACTGGTGGG+AGG 0.667320 7_2:-17123286 None:intergenic
AACAATGGTGATGATCCTGA+TGG 0.671828 7_2:-17123971 None:intergenic
AAAGGAAGAACACCACTAGG+GGG 0.676816 7_2:-17123263 None:intergenic
ATTAGTGGTGACAATTCTGG+TGG 0.683000 7_2:-17123332 None:intergenic
AATCCTGGTGGTGATGAAGG+TGG 0.692654 7_2:-17124031 None:intergenic
AAAGGAAAAGCCAATCCTGG+TGG 0.701193 7_2:-17124043 None:intergenic
CAGGTGCTAAAGGAACTGGT+GGG 0.724952 7_2:-17123289 None:intergenic
AATGGTGATGATCCTGATGG+AGG 0.729850 7_2:-17123968 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATATCTTATATACTATA+TGG - chr7_2:17122026-17122045 None:intergenic 15.0%
!!! TTTTAAAATTTTGCCTAAAA+AGG - chr7_2:17122538-17122557 None:intergenic 15.0%
!! ACAATATCTTATATACTATA+TGG - chr7_2:17122026-17122045 None:intergenic 15.0%
!!! TTTTAAAATTTTGCCTAAAA+AGG - chr7_2:17122538-17122557 None:intergenic 15.0%
!!! AATTGTCTTATTTTTTTGCA+AGG + chr7_2:17122266-17122285 Msa1050920:intron 20.0%
!!! ATTGTCTTATTTTTTTGCAA+GGG + chr7_2:17122267-17122286 Msa1050920:intron 20.0%
!!! TTTTAAAAACCCTATTGAAT+CGG + chr7_2:17122550-17122569 Msa1050920:intron 20.0%
!!! GAAAGCTATGTTTTAAAAAT+TGG - chr7_2:17122753-17122772 None:intergenic 20.0%
!!! CACACAAGAATATTTTTTAT+AGG - chr7_2:17122827-17122846 None:intergenic 20.0%
!!! AAAAAAGGTTATTGATTCTT+TGG + chr7_2:17123178-17123197 Msa1050920:CDS 20.0%
!!! AGTTTTTGTTGATTTTGATT+TGG - chr7_2:17123756-17123775 None:intergenic 20.0%
!!! AATTGTCTTATTTTTTTGCA+AGG + chr7_2:17122266-17122285 Msa1050920:intron 20.0%
!!! ATTGTCTTATTTTTTTGCAA+GGG + chr7_2:17122267-17122286 Msa1050920:intron 20.0%
!!! TTTTAAAAACCCTATTGAAT+CGG + chr7_2:17122550-17122569 Msa1050920:intron 20.0%
!!! GAAAGCTATGTTTTAAAAAT+TGG - chr7_2:17122753-17122772 None:intergenic 20.0%
!!! CACACAAGAATATTTTTTAT+AGG - chr7_2:17122827-17122846 None:intergenic 20.0%
!!! AAAAAAGGTTATTGATTCTT+TGG + chr7_2:17123178-17123197 Msa1050920:CDS 20.0%
!!! AGTTTTTGTTGATTTTGATT+TGG - chr7_2:17123756-17123775 None:intergenic 20.0%
!!! CTGTTTTTGATTGTAACATT+TGG + chr7_2:17122096-17122115 Msa1050920:CDS 25.0%
!! AAAATTTTGCCTAAAAAGGT+CGG - chr7_2:17122534-17122553 None:intergenic 25.0%
!!! GGTTCAATTTGTTAAACTTA+CGG - chr7_2:17122658-17122677 None:intergenic 25.0%
!!! ATTGAACCAATCTTTTTTTG+AGG + chr7_2:17122670-17122689 Msa1050920:intron 25.0%
!! CATGATTTAATTGGTTCAAT+TGG - chr7_2:17122699-17122718 None:intergenic 25.0%
! TAAAAAATATTCTTGTGTGC+AGG + chr7_2:17122828-17122847 Msa1050920:intron 25.0%
!! TTTACTTGTTTCTTGAATCT+TGG - chr7_2:17122900-17122919 None:intergenic 25.0%
! CAAGTAAAAACAAATGAACA+TGG + chr7_2:17122912-17122931 Msa1050920:CDS 25.0%
! AAACATGTAAGAAGAATCAA+AGG + chr7_2:17122969-17122988 Msa1050920:CDS 25.0%
! AATATTGGTGTAAGAATTTC+AGG - chr7_2:17123311-17123330 None:intergenic 25.0%
!!! AATGGATTATTAGGAACTAA+TGG - chr7_2:17123560-17123579 None:intergenic 25.0%
! TGATGTAATAAAGGAATTGT+TGG - chr7_2:17123677-17123696 None:intergenic 25.0%
! GGAAGAATTTGATGTAATAA+AGG - chr7_2:17123686-17123705 None:intergenic 25.0%
! AGAAATATTCTTTGTAGAAG+CGG - chr7_2:17124107-17124126 None:intergenic 25.0%
!!! CTGTTTTTGATTGTAACATT+TGG + chr7_2:17122096-17122115 Msa1050920:CDS 25.0%
!! AAAATTTTGCCTAAAAAGGT+CGG - chr7_2:17122534-17122553 None:intergenic 25.0%
!!! GGTTCAATTTGTTAAACTTA+CGG - chr7_2:17122658-17122677 None:intergenic 25.0%
!!! ATTGAACCAATCTTTTTTTG+AGG + chr7_2:17122670-17122689 Msa1050920:intron 25.0%
!! CATGATTTAATTGGTTCAAT+TGG - chr7_2:17122699-17122718 None:intergenic 25.0%
! TAAAAAATATTCTTGTGTGC+AGG + chr7_2:17122828-17122847 Msa1050920:intron 25.0%
!! TTTACTTGTTTCTTGAATCT+TGG - chr7_2:17122900-17122919 None:intergenic 25.0%
! CAAGTAAAAACAAATGAACA+TGG + chr7_2:17122912-17122931 Msa1050920:CDS 25.0%
! AAACATGTAAGAAGAATCAA+AGG + chr7_2:17122969-17122988 Msa1050920:CDS 25.0%
! AATATTGGTGTAAGAATTTC+AGG - chr7_2:17123311-17123330 None:intergenic 25.0%
!!! AATGGATTATTAGGAACTAA+TGG - chr7_2:17123560-17123579 None:intergenic 25.0%
! TGATGTAATAAAGGAATTGT+TGG - chr7_2:17123677-17123696 None:intergenic 25.0%
! GGAAGAATTTGATGTAATAA+AGG - chr7_2:17123686-17123705 None:intergenic 25.0%
! AGAAATATTCTTTGTAGAAG+CGG - chr7_2:17124107-17124126 None:intergenic 25.0%
! AACATTTGGTACATTTTCTG+AGG + chr7_2:17122110-17122129 Msa1050920:CDS 30.0%
TGAAATGAAATGATTTCCCA+TGG - chr7_2:17122226-17122245 None:intergenic 30.0%
ATGGGAAATCATTTCATTTC+AGG + chr7_2:17122225-17122244 Msa1050920:CDS 30.0%
CTTGAGATTGAATATGTGTT+TGG + chr7_2:17122395-17122414 Msa1050920:intron 30.0%
AAAACTAGTCAGCTCTTAAT+TGG - chr7_2:17122585-17122604 None:intergenic 30.0%
TGGTTTCCTCAAAAAAAGAT+TGG - chr7_2:17122679-17122698 None:intergenic 30.0%
ACCAATTAAATCATGATTCG+AGG + chr7_2:17122704-17122723 Msa1050920:intron 30.0%
TCCTCGAATCATGATTTAAT+TGG - chr7_2:17122708-17122727 None:intergenic 30.0%
CACCTAAAATCAAGAAAACA+AGG + chr7_2:17123065-17123084 Msa1050920:CDS 30.0%
!!! GTCCTTGTTTTCTTGATTTT+AGG - chr7_2:17123070-17123089 None:intergenic 30.0%
! CATAGATTTGGTTGTTTAAG+TGG - chr7_2:17123128-17123147 None:intergenic 30.0%
!!! GGTTTTTGGTTACATAGATT+TGG - chr7_2:17123140-17123159 None:intergenic 30.0%
TGTTGATCGAAACACAAAAA+AGG + chr7_2:17123163-17123182 Msa1050920:CDS 30.0%
!! AAAGAAGGATCAATTTTTGG+AGG - chr7_2:17123218-17123237 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
!! GTGGTTGTAATGGATTATTA+GGG - chr7_2:17123499-17123518 None:intergenic 30.0%
!! TGAAATGGATTAGGAATAGT+TGG - chr7_2:17123530-17123549 None:intergenic 30.0%
AAAGGAATTGTTGGATGAAA+TGG - chr7_2:17123668-17123687 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
!! GTGGTTGTAATGGATTATTA+GGG - chr7_2:17123499-17123518 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
GAAATATTCTTTGTAGAAGC+GGG - chr7_2:17124106-17124125 None:intergenic 30.0%
! AACATTTGGTACATTTTCTG+AGG + chr7_2:17122110-17122129 Msa1050920:CDS 30.0%
TGAAATGAAATGATTTCCCA+TGG - chr7_2:17122226-17122245 None:intergenic 30.0%
ATGGGAAATCATTTCATTTC+AGG + chr7_2:17122225-17122244 Msa1050920:CDS 30.0%
CTTGAGATTGAATATGTGTT+TGG + chr7_2:17122395-17122414 Msa1050920:intron 30.0%
AAAACTAGTCAGCTCTTAAT+TGG - chr7_2:17122585-17122604 None:intergenic 30.0%
TGGTTTCCTCAAAAAAAGAT+TGG - chr7_2:17122679-17122698 None:intergenic 30.0%
ACCAATTAAATCATGATTCG+AGG + chr7_2:17122704-17122723 Msa1050920:intron 30.0%
TCCTCGAATCATGATTTAAT+TGG - chr7_2:17122708-17122727 None:intergenic 30.0%
CACCTAAAATCAAGAAAACA+AGG + chr7_2:17123065-17123084 Msa1050920:CDS 30.0%
!!! GTCCTTGTTTTCTTGATTTT+AGG - chr7_2:17123070-17123089 None:intergenic 30.0%
! CATAGATTTGGTTGTTTAAG+TGG - chr7_2:17123128-17123147 None:intergenic 30.0%
!!! GGTTTTTGGTTACATAGATT+TGG - chr7_2:17123140-17123159 None:intergenic 30.0%
TGTTGATCGAAACACAAAAA+AGG + chr7_2:17123163-17123182 Msa1050920:CDS 30.0%
!! AAAGAAGGATCAATTTTTGG+AGG - chr7_2:17123218-17123237 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
!! GTGGTTGTAATGGATTATTA+GGG - chr7_2:17123499-17123518 None:intergenic 30.0%
!! TGAAATGGATTAGGAATAGT+TGG - chr7_2:17123530-17123549 None:intergenic 30.0%
AAAGGAATTGTTGGATGAAA+TGG - chr7_2:17123668-17123687 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
!! GTGGTTGTAATGGATTATTA+GGG - chr7_2:17123499-17123518 None:intergenic 30.0%
!! AATGGATTATTAGGGACTAA+TGG - chr7_2:17123491-17123510 None:intergenic 30.0%
GAAATATTCTTTGTAGAAGC+GGG - chr7_2:17124106-17124125 None:intergenic 30.0%
CAAGAAACCAAGACATTCTA+AGG - chr7_2:17122071-17122090 None:intergenic 35.0%
! TTGTGACACATGTTTTCAAC+AGG + chr7_2:17122194-17122213 Msa1050920:CDS 35.0%
! TTTTCAACAGGATTTCTCCA+TGG + chr7_2:17122206-17122225 Msa1050920:CDS 35.0%
TTTCAACAGGATTTCTCCAT+GGG + chr7_2:17122207-17122226 Msa1050920:CDS 35.0%
!! TTGATTTGTCACTATCGTGT+CGG + chr7_2:17122478-17122497 Msa1050920:intron 35.0%
!!! TATTTTAGCGAGTGCTTCAT+AGG + chr7_2:17122508-17122527 Msa1050920:intron 35.0%
CAACTAGACTGCAATGTAAT+CGG - chr7_2:17122623-17122642 None:intergenic 35.0%
GTTAAACTTACGGTTGACTA+CGG - chr7_2:17122648-17122667 None:intergenic 35.0%
GTTGAAGTAGAATGCAAAGA+TGG + chr7_2:17122858-17122877 Msa1050920:CDS 35.0%
!! TTCGATCAACACTTGGTTTT+TGG - chr7_2:17123154-17123173 None:intergenic 35.0%
TTTGTGTTTCGATCAACACT+TGG - chr7_2:17123161-17123180 None:intergenic 35.0%
! GGGAAAGAAGGATCAATTTT+TGG - chr7_2:17123221-17123240 None:intergenic 35.0%
! GTAAGAATTTCAGGTGCTAA+AGG - chr7_2:17123302-17123321 None:intergenic 35.0%
CTTCATTAGTCATTCCACTA+GGG - chr7_2:17123358-17123377 None:intergenic 35.0%
TCTTCATTAGTCATTCCACT+AGG - chr7_2:17123359-17123378 None:intergenic 35.0%
!! GAGGAATGTGAAAAGTATCA+AGG - chr7_2:17123448-17123467 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
! TTAGGAATAGTTGGTGTACT+TGG - chr7_2:17123521-17123540 None:intergenic 35.0%
TTATTAGGAACTAATGGTGG+TGG - chr7_2:17123554-17123573 None:intergenic 35.0%
GGATTATTAGGAACTAATGG+TGG - chr7_2:17123557-17123576 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
!! ACTAATGTTGGTGGTTGTAA+TGG - chr7_2:17123578-17123597 None:intergenic 35.0%
ATTGTTGGATGAAATGGATC+AGG - chr7_2:17123662-17123681 None:intergenic 35.0%
ACTAATGGTGACAATATTGG+TGG - chr7_2:17123707-17123726 None:intergenic 35.0%
AGGTTAAAGGAATCAAGGTT+AGG - chr7_2:17123815-17123834 None:intergenic 35.0%
!! GAAAAAATGGATTAGGAGGA+AGG - chr7_2:17123835-17123854 None:intergenic 35.0%
!! ACTAATGGTGGTGGAAAAAA+TGG - chr7_2:17123848-17123867 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
TTAGGAATTGTTGGTGTACT+TGG - chr7_2:17123893-17123912 None:intergenic 35.0%
!! TGAAATGGGTTAGGAATTGT+TGG - chr7_2:17123902-17123921 None:intergenic 35.0%
TTATTAGGGACTAATGGTGT+TGG - chr7_2:17123935-17123954 None:intergenic 35.0%
!! GTGGCTGAAATGGATTATTA+GGG - chr7_2:17123949-17123968 None:intergenic 35.0%
CAAGAAACCAAGACATTCTA+AGG - chr7_2:17122071-17122090 None:intergenic 35.0%
! TTGTGACACATGTTTTCAAC+AGG + chr7_2:17122194-17122213 Msa1050920:CDS 35.0%
! TTTTCAACAGGATTTCTCCA+TGG + chr7_2:17122206-17122225 Msa1050920:CDS 35.0%
TTTCAACAGGATTTCTCCAT+GGG + chr7_2:17122207-17122226 Msa1050920:CDS 35.0%
!! TTGATTTGTCACTATCGTGT+CGG + chr7_2:17122478-17122497 Msa1050920:intron 35.0%
!!! TATTTTAGCGAGTGCTTCAT+AGG + chr7_2:17122508-17122527 Msa1050920:intron 35.0%
CAACTAGACTGCAATGTAAT+CGG - chr7_2:17122623-17122642 None:intergenic 35.0%
GTTAAACTTACGGTTGACTA+CGG - chr7_2:17122648-17122667 None:intergenic 35.0%
GTTGAAGTAGAATGCAAAGA+TGG + chr7_2:17122858-17122877 Msa1050920:CDS 35.0%
!! TTCGATCAACACTTGGTTTT+TGG - chr7_2:17123154-17123173 None:intergenic 35.0%
TTTGTGTTTCGATCAACACT+TGG - chr7_2:17123161-17123180 None:intergenic 35.0%
! GGGAAAGAAGGATCAATTTT+TGG - chr7_2:17123221-17123240 None:intergenic 35.0%
! GTAAGAATTTCAGGTGCTAA+AGG - chr7_2:17123302-17123321 None:intergenic 35.0%
CTTCATTAGTCATTCCACTA+GGG - chr7_2:17123358-17123377 None:intergenic 35.0%
TCTTCATTAGTCATTCCACT+AGG - chr7_2:17123359-17123378 None:intergenic 35.0%
!! GAGGAATGTGAAAAGTATCA+AGG - chr7_2:17123448-17123467 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
! TTAGGAATAGTTGGTGTACT+TGG - chr7_2:17123521-17123540 None:intergenic 35.0%
TTATTAGGAACTAATGGTGG+TGG - chr7_2:17123554-17123573 None:intergenic 35.0%
GGATTATTAGGAACTAATGG+TGG - chr7_2:17123557-17123576 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
!! ACTAATGTTGGTGGTTGTAA+TGG - chr7_2:17123578-17123597 None:intergenic 35.0%
ATTGTTGGATGAAATGGATC+AGG - chr7_2:17123662-17123681 None:intergenic 35.0%
ACTAATGGTGACAATATTGG+TGG - chr7_2:17123707-17123726 None:intergenic 35.0%
AGGTTAAAGGAATCAAGGTT+AGG - chr7_2:17123815-17123834 None:intergenic 35.0%
!! GAAAAAATGGATTAGGAGGA+AGG - chr7_2:17123835-17123854 None:intergenic 35.0%
!! ACTAATGGTGGTGGAAAAAA+TGG - chr7_2:17123848-17123867 None:intergenic 35.0%
!! GGTGGTTGTAATGGATTATT+AGG - chr7_2:17123500-17123519 None:intergenic 35.0%
TTAGGAATTGTTGGTGTACT+TGG - chr7_2:17123893-17123912 None:intergenic 35.0%
!! TGAAATGGGTTAGGAATTGT+TGG - chr7_2:17123902-17123921 None:intergenic 35.0%
TTATTAGGGACTAATGGTGT+TGG - chr7_2:17123935-17123954 None:intergenic 35.0%
!! GTGGCTGAAATGGATTATTA+GGG - chr7_2:17123949-17123968 None:intergenic 35.0%
TATTGTAGACCCTCTGTAAG+AGG + chr7_2:17122040-17122059 Msa1050920:five_prime_UTR 40.0%
AAGGTTTGTCCTCTTACAGA+GGG - chr7_2:17122052-17122071 None:intergenic 40.0%
TAAGGTTTGTCCTCTTACAG+AGG - chr7_2:17122053-17122072 None:intergenic 40.0%
GGACAAACCTTAGAATGTCT+TGG + chr7_2:17122061-17122080 Msa1050920:exon 40.0%
TAGTGACAAATCAACACTGG+TGG - chr7_2:17122472-17122491 None:intergenic 40.0%
CGATAGTGACAAATCAACAC+TGG - chr7_2:17122475-17122494 None:intergenic 40.0%
! TGATTTGTCACTATCGTGTC+GGG + chr7_2:17122479-17122498 Msa1050920:intron 40.0%
AAAAACCCTATTGAATCGGC+TGG + chr7_2:17122554-17122573 Msa1050920:intron 40.0%
! TTCAACCAGCCGATTCAATA+GGG - chr7_2:17122562-17122581 None:intergenic 40.0%
GTAATCGGAATCAAACCAAC+AGG - chr7_2:17122608-17122627 None:intergenic 40.0%
ACATGTTTGCTCACTGAGAA+TGG - chr7_2:17122957-17122976 None:intergenic 40.0%
GCTGAGGCTATAGAACAAAA+TGG - chr7_2:17123026-17123045 None:intergenic 40.0%
TAGGTGAAGTGATGAAGATG+AGG - chr7_2:17123051-17123070 None:intergenic 40.0%
GACTACACATATTCTCAGCA+GGG + chr7_2:17123087-17123106 Msa1050920:CDS 40.0%
! ATTTCAGGTGCTAAAGGAAC+TGG - chr7_2:17123296-17123315 None:intergenic 40.0%
GACAATTCTGGTGGCAATAT+TGG - chr7_2:17123326-17123345 None:intergenic 40.0%
ATTAGTGGTGACAATTCTGG+TGG - chr7_2:17123335-17123354 None:intergenic 40.0%
!! ACTAATGGTGGTGGGAAAAA+TGG - chr7_2:17123476-17123495 None:intergenic 40.0%
TATTAGGGACTAATGGTGGT+GGG - chr7_2:17123484-17123503 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! ACTAATGGTGGTGGTTGAAA+TGG - chr7_2:17123545-17123564 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! GGTGGATTATTAGGGACTAA+TGG - chr7_2:17123614-17123633 None:intergenic 40.0%
!! GTGGTTGTGGTGGATTATTA+GGG - chr7_2:17123622-17123641 None:intergenic 40.0%
TGAAATGGATCAGGAGAATG+TGG - chr7_2:17123653-17123672 None:intergenic 40.0%
GGGACTAATGGTGACAATAT+TGG - chr7_2:17123710-17123729 None:intergenic 40.0%
GAGGAAGGTTAAAGGAATCA+AGG - chr7_2:17123820-17123839 None:intergenic 40.0%
! TGGATTAGGAGGAAGGTTAA+AGG - chr7_2:17123828-17123847 None:intergenic 40.0%
!! GGTGGAAAAAATGGATTAGG+AGG - chr7_2:17123839-17123858 None:intergenic 40.0%
!! GGTGGTGGAAAAAATGGATT+AGG - chr7_2:17123842-17123861 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! TTGGAGTTGGTGGTTGAAAT+GGG - chr7_2:17123916-17123935 None:intergenic 40.0%
!! GGTGGCTGAAATGGATTATT+AGG - chr7_2:17123950-17123969 None:intergenic 40.0%
! AACAATGGTGATGATCCTGA+TGG - chr7_2:17123974-17123993 None:intergenic 40.0%
! ACCATTGTTTCCTTTTCCGT+CGG + chr7_2:17123985-17124004 Msa1050920:CDS 40.0%
ATATTCTTTGTAGAAGCGGG+AGG - chr7_2:17124103-17124122 None:intergenic 40.0%
TATTGTAGACCCTCTGTAAG+AGG + chr7_2:17122040-17122059 Msa1050920:five_prime_UTR 40.0%
AAGGTTTGTCCTCTTACAGA+GGG - chr7_2:17122052-17122071 None:intergenic 40.0%
TAAGGTTTGTCCTCTTACAG+AGG - chr7_2:17122053-17122072 None:intergenic 40.0%
GGACAAACCTTAGAATGTCT+TGG + chr7_2:17122061-17122080 Msa1050920:exon 40.0%
TAGTGACAAATCAACACTGG+TGG - chr7_2:17122472-17122491 None:intergenic 40.0%
CGATAGTGACAAATCAACAC+TGG - chr7_2:17122475-17122494 None:intergenic 40.0%
! TGATTTGTCACTATCGTGTC+GGG + chr7_2:17122479-17122498 Msa1050920:intron 40.0%
AAAAACCCTATTGAATCGGC+TGG + chr7_2:17122554-17122573 Msa1050920:intron 40.0%
! TTCAACCAGCCGATTCAATA+GGG - chr7_2:17122562-17122581 None:intergenic 40.0%
GTAATCGGAATCAAACCAAC+AGG - chr7_2:17122608-17122627 None:intergenic 40.0%
ACATGTTTGCTCACTGAGAA+TGG - chr7_2:17122957-17122976 None:intergenic 40.0%
GCTGAGGCTATAGAACAAAA+TGG - chr7_2:17123026-17123045 None:intergenic 40.0%
TAGGTGAAGTGATGAAGATG+AGG - chr7_2:17123051-17123070 None:intergenic 40.0%
GACTACACATATTCTCAGCA+GGG + chr7_2:17123087-17123106 Msa1050920:CDS 40.0%
! ATTTCAGGTGCTAAAGGAAC+TGG - chr7_2:17123296-17123315 None:intergenic 40.0%
GACAATTCTGGTGGCAATAT+TGG - chr7_2:17123326-17123345 None:intergenic 40.0%
ATTAGTGGTGACAATTCTGG+TGG - chr7_2:17123335-17123354 None:intergenic 40.0%
!! ACTAATGGTGGTGGGAAAAA+TGG - chr7_2:17123476-17123495 None:intergenic 40.0%
TATTAGGGACTAATGGTGGT+GGG - chr7_2:17123484-17123503 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! ACTAATGGTGGTGGTTGAAA+TGG - chr7_2:17123545-17123564 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! GGTGGATTATTAGGGACTAA+TGG - chr7_2:17123614-17123633 None:intergenic 40.0%
!! GTGGTTGTGGTGGATTATTA+GGG - chr7_2:17123622-17123641 None:intergenic 40.0%
TGAAATGGATCAGGAGAATG+TGG - chr7_2:17123653-17123672 None:intergenic 40.0%
GGGACTAATGGTGACAATAT+TGG - chr7_2:17123710-17123729 None:intergenic 40.0%
GAGGAAGGTTAAAGGAATCA+AGG - chr7_2:17123820-17123839 None:intergenic 40.0%
! TGGATTAGGAGGAAGGTTAA+AGG - chr7_2:17123828-17123847 None:intergenic 40.0%
!! GGTGGAAAAAATGGATTAGG+AGG - chr7_2:17123839-17123858 None:intergenic 40.0%
!! GGTGGTGGAAAAAATGGATT+AGG - chr7_2:17123842-17123861 None:intergenic 40.0%
TTATTAGGGACTAATGGTGG+TGG - chr7_2:17123485-17123504 None:intergenic 40.0%
GGATTATTAGGGACTAATGG+TGG - chr7_2:17123488-17123507 None:intergenic 40.0%
!! TTGGAGTTGGTGGTTGAAAT+GGG - chr7_2:17123916-17123935 None:intergenic 40.0%
!! GGTGGCTGAAATGGATTATT+AGG - chr7_2:17123950-17123969 None:intergenic 40.0%
! AACAATGGTGATGATCCTGA+TGG - chr7_2:17123974-17123993 None:intergenic 40.0%
! ACCATTGTTTCCTTTTCCGT+CGG + chr7_2:17123985-17124004 Msa1050920:CDS 40.0%
ATATTCTTTGTAGAAGCGGG+AGG - chr7_2:17124103-17124122 None:intergenic 40.0%
! CTTCATAGGCCGACCTTTTT+AGG + chr7_2:17122522-17122541 Msa1050920:intron 45.0%
! GTTCAACCAGCCGATTCAAT+AGG - chr7_2:17122563-17122582 None:intergenic 45.0%
!!! GAGCTGACTAGTTTTCCTGT+TGG + chr7_2:17122590-17122609 Msa1050920:intron 45.0%
TGCTCACTGAGAATGGAAGT+TGG - chr7_2:17122950-17122969 None:intergenic 45.0%
GGACTACACATATTCTCAGC+AGG + chr7_2:17123086-17123105 Msa1050920:CDS 45.0%
AAAGGAAGAACACCACTAGG+GGG - chr7_2:17123266-17123285 None:intergenic 45.0%
GAAAGGAAGAACACCACTAG+GGG - chr7_2:17123267-17123286 None:intergenic 45.0%
GGAAAGGAAGAACACCACTA+GGG - chr7_2:17123268-17123287 None:intergenic 45.0%
AGGAAAGGAAGAACACCACT+AGG - chr7_2:17123269-17123288 None:intergenic 45.0%
! GGGATTAGTGGTGACAATTC+TGG - chr7_2:17123338-17123357 None:intergenic 45.0%
TTGTCACCACTAATCCCTAG+TGG + chr7_2:17123341-17123360 Msa1050920:CDS 45.0%
GTCATTCCACTAGGGATTAG+TGG - chr7_2:17123350-17123369 None:intergenic 45.0%
!! GGTGGGAAAAATGGATTAGG+AGG - chr7_2:17123467-17123486 None:intergenic 45.0%
!! GGTGGTGGGAAAAATGGATT+AGG - chr7_2:17123470-17123489 None:intergenic 45.0%
! GGTGTACTTGGTGGTTGTAA+TGG - chr7_2:17123509-17123528 None:intergenic 45.0%
! GGAATAGTTGGTGTACTTGG+TGG - chr7_2:17123518-17123537 None:intergenic 45.0%
! GGTGGTGGTTGAAATGGATT+AGG - chr7_2:17123539-17123558 None:intergenic 45.0%
GGATTAGGGACTAATGTTGG+TGG - chr7_2:17123587-17123606 None:intergenic 45.0%
!! GGTGGATTAGGGACTAATGT+TGG - chr7_2:17123590-17123609 None:intergenic 45.0%
!! GGACTAATGGTGGTGGATTA+GGG - chr7_2:17123601-17123620 None:intergenic 45.0%
!! GGTGGTTGTGGTGGATTATT+AGG - chr7_2:17123623-17123642 None:intergenic 45.0%
TCAGGAGAATGTGGTGTACT+TGG - chr7_2:17123644-17123663 None:intergenic 45.0%
TTGTCACCATTAGTCCCTAG+TGG + chr7_2:17123713-17123732 Msa1050920:CDS 45.0%
ACCATTAGTCCCTAGTGGAA+AGG + chr7_2:17123718-17123737 Msa1050920:CDS 45.0%
!! CATCACTAGCCTTTCCACTA+GGG - chr7_2:17123730-17123749 None:intergenic 45.0%
!! TCATCACTAGCCTTTCCACT+AGG - chr7_2:17123731-17123750 None:intergenic 45.0%
! GGTGTACTTGGTGGTTGTAA+TGG - chr7_2:17123509-17123528 None:intergenic 45.0%
GGAATTGTTGGTGTACTTGG+TGG - chr7_2:17123890-17123909 None:intergenic 45.0%
!! GTTGGTGGTTGAAATGGGTT+AGG - chr7_2:17123911-17123930 None:intergenic 45.0%
!! GTTGGAGTTGGTGGTTGAAA+TGG - chr7_2:17123917-17123936 None:intergenic 45.0%
! ACTAATGGTGTTGGAGTTGG+TGG - chr7_2:17123926-17123945 None:intergenic 45.0%
! AATGGTGATGATCCTGATGG+AGG - chr7_2:17123971-17123990 None:intergenic 45.0%
ACCGACGGAAAAGGAAACAA+TGG - chr7_2:17123989-17124008 None:intergenic 45.0%
AAAGGAAAAGCCAATCCTGG+TGG - chr7_2:17124046-17124065 None:intergenic 45.0%
GGAAAAGGAAAAGCCAATCC+TGG - chr7_2:17124049-17124068 None:intergenic 45.0%
! CTTCATAGGCCGACCTTTTT+AGG + chr7_2:17122522-17122541 Msa1050920:intron 45.0%
! GTTCAACCAGCCGATTCAAT+AGG - chr7_2:17122563-17122582 None:intergenic 45.0%
!!! GAGCTGACTAGTTTTCCTGT+TGG + chr7_2:17122590-17122609 Msa1050920:intron 45.0%
TGCTCACTGAGAATGGAAGT+TGG - chr7_2:17122950-17122969 None:intergenic 45.0%
GGACTACACATATTCTCAGC+AGG + chr7_2:17123086-17123105 Msa1050920:CDS 45.0%
AAAGGAAGAACACCACTAGG+GGG - chr7_2:17123266-17123285 None:intergenic 45.0%
GAAAGGAAGAACACCACTAG+GGG - chr7_2:17123267-17123286 None:intergenic 45.0%
GGAAAGGAAGAACACCACTA+GGG - chr7_2:17123268-17123287 None:intergenic 45.0%
AGGAAAGGAAGAACACCACT+AGG - chr7_2:17123269-17123288 None:intergenic 45.0%
! GGGATTAGTGGTGACAATTC+TGG - chr7_2:17123338-17123357 None:intergenic 45.0%
TTGTCACCACTAATCCCTAG+TGG + chr7_2:17123341-17123360 Msa1050920:CDS 45.0%
GTCATTCCACTAGGGATTAG+TGG - chr7_2:17123350-17123369 None:intergenic 45.0%
!! GGTGGGAAAAATGGATTAGG+AGG - chr7_2:17123467-17123486 None:intergenic 45.0%
!! GGTGGTGGGAAAAATGGATT+AGG - chr7_2:17123470-17123489 None:intergenic 45.0%
! GGTGTACTTGGTGGTTGTAA+TGG - chr7_2:17123509-17123528 None:intergenic 45.0%
! GGAATAGTTGGTGTACTTGG+TGG - chr7_2:17123518-17123537 None:intergenic 45.0%
! GGTGGTGGTTGAAATGGATT+AGG - chr7_2:17123539-17123558 None:intergenic 45.0%
GGATTAGGGACTAATGTTGG+TGG - chr7_2:17123587-17123606 None:intergenic 45.0%
!! GGTGGATTAGGGACTAATGT+TGG - chr7_2:17123590-17123609 None:intergenic 45.0%
!! GGACTAATGGTGGTGGATTA+GGG - chr7_2:17123601-17123620 None:intergenic 45.0%
!! GGTGGTTGTGGTGGATTATT+AGG - chr7_2:17123623-17123642 None:intergenic 45.0%
TCAGGAGAATGTGGTGTACT+TGG - chr7_2:17123644-17123663 None:intergenic 45.0%
TTGTCACCATTAGTCCCTAG+TGG + chr7_2:17123713-17123732 Msa1050920:CDS 45.0%
ACCATTAGTCCCTAGTGGAA+AGG + chr7_2:17123718-17123737 Msa1050920:CDS 45.0%
!! CATCACTAGCCTTTCCACTA+GGG - chr7_2:17123730-17123749 None:intergenic 45.0%
!! TCATCACTAGCCTTTCCACT+AGG - chr7_2:17123731-17123750 None:intergenic 45.0%
! GGTGTACTTGGTGGTTGTAA+TGG - chr7_2:17123509-17123528 None:intergenic 45.0%
GGAATTGTTGGTGTACTTGG+TGG - chr7_2:17123890-17123909 None:intergenic 45.0%
!! GTTGGTGGTTGAAATGGGTT+AGG - chr7_2:17123911-17123930 None:intergenic 45.0%
!! GTTGGAGTTGGTGGTTGAAA+TGG - chr7_2:17123917-17123936 None:intergenic 45.0%
! ACTAATGGTGTTGGAGTTGG+TGG - chr7_2:17123926-17123945 None:intergenic 45.0%
! AATGGTGATGATCCTGATGG+AGG - chr7_2:17123971-17123990 None:intergenic 45.0%
ACCGACGGAAAAGGAAACAA+TGG - chr7_2:17123989-17124008 None:intergenic 45.0%
AAAGGAAAAGCCAATCCTGG+TGG - chr7_2:17124046-17124065 None:intergenic 45.0%
GGAAAAGGAAAAGCCAATCC+TGG - chr7_2:17124049-17124068 None:intergenic 45.0%
GAAGCCTCTTTCTGCTGTTG+TGG + chr7_2:17122158-17122177 Msa1050920:CDS 50.0%
CCAACCACAACAGCAGAAAG+AGG - chr7_2:17122165-17122184 None:intergenic 50.0%
CCTCTTTCTGCTGTTGTGGT+TGG + chr7_2:17122162-17122181 Msa1050920:CDS 50.0%
TGATGAAGATGAGGCTGCTG+AGG - chr7_2:17123042-17123061 None:intergenic 50.0%
TTGGATCTTGAAGTGGGGGT+GGG - chr7_2:17123241-17123260 None:intergenic 50.0%
TTTGGATCTTGAAGTGGGGG+TGG - chr7_2:17123242-17123261 None:intergenic 50.0%
GGGTTTGGATCTTGAAGTGG+GGG - chr7_2:17123245-17123264 None:intergenic 50.0%
GGGGTTTGGATCTTGAAGTG+GGG - chr7_2:17123246-17123265 None:intergenic 50.0%
GGGGGTTTGGATCTTGAAGT+GGG - chr7_2:17123247-17123266 None:intergenic 50.0%
AAGGAAGAACACCACTAGGG+GGG - chr7_2:17123265-17123284 None:intergenic 50.0%
AAAGGAACTGGTGGGAGGAA+AGG - chr7_2:17123284-17123303 None:intergenic 50.0%
CAGGTGCTAAAGGAACTGGT+GGG - chr7_2:17123292-17123311 None:intergenic 50.0%
TCAGGTGCTAAAGGAACTGG+TGG - chr7_2:17123293-17123312 None:intergenic 50.0%
!! GGGACTAATGGTGGTGGATT+AGG - chr7_2:17123602-17123621 None:intergenic 50.0%
! TGTGGTGTACTTGGTGGTTG+TGG - chr7_2:17123635-17123654 None:intergenic 50.0%
GGAGAATGTGGTGTACTTGG+TGG - chr7_2:17123641-17123660 None:intergenic 50.0%
GCCTTTCCACTAGGGACTAA+TGG - chr7_2:17123722-17123741 None:intergenic 50.0%
! GGGACTAATGGTGTTGGAGT+TGG - chr7_2:17123929-17123948 None:intergenic 50.0%
! TTTCCTTTTCCGTCGGTACC+AGG + chr7_2:17123992-17124011 Msa1050920:CDS 50.0%
!! AAACCTGGTACCGACGGAAA+AGG - chr7_2:17123998-17124017 None:intergenic 50.0%
! GGACTTAAACCTGGTACCGA+CGG - chr7_2:17124004-17124023 None:intergenic 50.0%
GGTGGTGAAGGACTTAAACC+TGG - chr7_2:17124013-17124032 None:intergenic 50.0%
! AATCCTGGTGGTGATGAAGG+TGG - chr7_2:17124034-17124053 None:intergenic 50.0%
ACCTTCATCACCACCAGGAT+TGG + chr7_2:17124033-17124052 Msa1050920:CDS 50.0%
! GGAGGGAATAGTGGAGGAAA+AGG - chr7_2:17124064-17124083 None:intergenic 50.0%
GAAGCCTCTTTCTGCTGTTG+TGG + chr7_2:17122158-17122177 Msa1050920:CDS 50.0%
CCAACCACAACAGCAGAAAG+AGG - chr7_2:17122165-17122184 None:intergenic 50.0%
CCTCTTTCTGCTGTTGTGGT+TGG + chr7_2:17122162-17122181 Msa1050920:CDS 50.0%
TGATGAAGATGAGGCTGCTG+AGG - chr7_2:17123042-17123061 None:intergenic 50.0%
TTGGATCTTGAAGTGGGGGT+GGG - chr7_2:17123241-17123260 None:intergenic 50.0%
TTTGGATCTTGAAGTGGGGG+TGG - chr7_2:17123242-17123261 None:intergenic 50.0%
GGGTTTGGATCTTGAAGTGG+GGG - chr7_2:17123245-17123264 None:intergenic 50.0%
GGGGTTTGGATCTTGAAGTG+GGG - chr7_2:17123246-17123265 None:intergenic 50.0%
GGGGGTTTGGATCTTGAAGT+GGG - chr7_2:17123247-17123266 None:intergenic 50.0%
AAGGAAGAACACCACTAGGG+GGG - chr7_2:17123265-17123284 None:intergenic 50.0%
AAAGGAACTGGTGGGAGGAA+AGG - chr7_2:17123284-17123303 None:intergenic 50.0%
CAGGTGCTAAAGGAACTGGT+GGG - chr7_2:17123292-17123311 None:intergenic 50.0%
TCAGGTGCTAAAGGAACTGG+TGG - chr7_2:17123293-17123312 None:intergenic 50.0%
!! GGGACTAATGGTGGTGGATT+AGG - chr7_2:17123602-17123621 None:intergenic 50.0%
! TGTGGTGTACTTGGTGGTTG+TGG - chr7_2:17123635-17123654 None:intergenic 50.0%
GGAGAATGTGGTGTACTTGG+TGG - chr7_2:17123641-17123660 None:intergenic 50.0%
GCCTTTCCACTAGGGACTAA+TGG - chr7_2:17123722-17123741 None:intergenic 50.0%
! GGGACTAATGGTGTTGGAGT+TGG - chr7_2:17123929-17123948 None:intergenic 50.0%
! TTTCCTTTTCCGTCGGTACC+AGG + chr7_2:17123992-17124011 Msa1050920:CDS 50.0%
!! AAACCTGGTACCGACGGAAA+AGG - chr7_2:17123998-17124017 None:intergenic 50.0%
! GGACTTAAACCTGGTACCGA+CGG - chr7_2:17124004-17124023 None:intergenic 50.0%
GGTGGTGAAGGACTTAAACC+TGG - chr7_2:17124013-17124032 None:intergenic 50.0%
! AATCCTGGTGGTGATGAAGG+TGG - chr7_2:17124034-17124053 None:intergenic 50.0%
ACCTTCATCACCACCAGGAT+TGG + chr7_2:17124033-17124052 Msa1050920:CDS 50.0%
! GGAGGGAATAGTGGAGGAAA+AGG - chr7_2:17124064-17124083 None:intergenic 50.0%
TGAAGTGGGGGTGGGAAAGA+AGG - chr7_2:17123233-17123252 None:intergenic 55.0%
GGGGGGTTTGGATCTTGAAG+TGG - chr7_2:17123248-17123267 None:intergenic 55.0%
CAAGATCCAAACCCCCCTAG+TGG + chr7_2:17123251-17123270 Msa1050920:CDS 55.0%
AGAACACCACTAGGGGGGTT+TGG - chr7_2:17123260-17123279 None:intergenic 55.0%
GTGCTAAAGGAACTGGTGGG+AGG - chr7_2:17123289-17123308 None:intergenic 55.0%
! GGTGTACTTGGTGGTTGTGG+TGG - chr7_2:17123632-17123651 None:intergenic 55.0%
CCTGATGGAGGTGGCTGAAA+TGG - chr7_2:17123959-17123978 None:intergenic 55.0%
CCATTTCAGCCACCTCCATC+AGG + chr7_2:17123956-17123975 Msa1050920:CDS 55.0%
GGTGATGATCCTGATGGAGG+TGG - chr7_2:17123968-17123987 None:intergenic 55.0%
! GGTGATGAAGGTGGTGGTGA+AGG - chr7_2:17124025-17124044 None:intergenic 55.0%
! GCCAATCCTGGTGGTGATGA+AGG - chr7_2:17124037-17124056 None:intergenic 55.0%
TGAAGTGGGGGTGGGAAAGA+AGG - chr7_2:17123233-17123252 None:intergenic 55.0%
GGGGGGTTTGGATCTTGAAG+TGG - chr7_2:17123248-17123267 None:intergenic 55.0%
CAAGATCCAAACCCCCCTAG+TGG + chr7_2:17123251-17123270 Msa1050920:CDS 55.0%
AGAACACCACTAGGGGGGTT+TGG - chr7_2:17123260-17123279 None:intergenic 55.0%
GTGCTAAAGGAACTGGTGGG+AGG - chr7_2:17123289-17123308 None:intergenic 55.0%
! GGTGTACTTGGTGGTTGTGG+TGG - chr7_2:17123632-17123651 None:intergenic 55.0%
CCTGATGGAGGTGGCTGAAA+TGG - chr7_2:17123959-17123978 None:intergenic 55.0%
CCATTTCAGCCACCTCCATC+AGG + chr7_2:17123956-17123975 Msa1050920:CDS 55.0%
GGTGATGATCCTGATGGAGG+TGG - chr7_2:17123968-17123987 None:intergenic 55.0%
! GGTGATGAAGGTGGTGGTGA+AGG - chr7_2:17124025-17124044 None:intergenic 55.0%
! GCCAATCCTGGTGGTGATGA+AGG - chr7_2:17124037-17124056 None:intergenic 55.0%
! CCTGGTGGTGATGAAGGTGG+TGG - chr7_2:17124031-17124050 None:intergenic 60.0%
CCACCACCTTCATCACCACC+AGG + chr7_2:17124028-17124047 Msa1050920:CDS 60.0%
CCAGGTGGAGGGAATAGTGG+AGG - chr7_2:17124070-17124089 None:intergenic 60.0%
CCTCCACTATTCCCTCCACC+TGG + chr7_2:17124067-17124086 Msa1050920:CDS 60.0%
CTGCCAGGTGGAGGGAATAG+TGG - chr7_2:17124073-17124092 None:intergenic 60.0%
CTATTCCCTCCACCTGGCAG+TGG + chr7_2:17124073-17124092 Msa1050920:CDS 60.0%
! CCTGGTGGTGATGAAGGTGG+TGG - chr7_2:17124031-17124050 None:intergenic 60.0%
CCACCACCTTCATCACCACC+AGG + chr7_2:17124028-17124047 Msa1050920:CDS 60.0%
CCAGGTGGAGGGAATAGTGG+AGG - chr7_2:17124070-17124089 None:intergenic 60.0%
CCTCCACTATTCCCTCCACC+TGG + chr7_2:17124067-17124086 Msa1050920:CDS 60.0%
CTGCCAGGTGGAGGGAATAG+TGG - chr7_2:17124073-17124092 None:intergenic 60.0%
CTATTCCCTCCACCTGGCAG+TGG + chr7_2:17124073-17124092 Msa1050920:CDS 60.0%
! GTGTGCCACTGCCAGGTGGA+GGG - chr7_2:17124081-17124100 None:intergenic 65.0%
! GTGTGCCACTGCCAGGTGGA+GGG - chr7_2:17124081-17124100 None:intergenic 65.0%
! GGTGTGCCACTGCCAGGTGG+AGG - chr7_2:17124082-17124101 None:intergenic 70.0%
! GGAGGTGTGCCACTGCCAGG+TGG - chr7_2:17124085-17124104 None:intergenic 70.0%
! GGTGTGCCACTGCCAGGTGG+AGG - chr7_2:17124082-17124101 None:intergenic 70.0%
! GGAGGTGTGCCACTGCCAGG+TGG - chr7_2:17124085-17124104 None:intergenic 70.0%
! GCGGGAGGTGTGCCACTGCC+AGG - chr7_2:17124088-17124107 None:intergenic 75.0%
! GCGGGAGGTGTGCCACTGCC+AGG - chr7_2:17124088-17124107 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 17121998 17124132 17121998 ID=Msa1050920;Name=Msa1050920
chr7_2 mRNA 17121998 17124132 17121998 ID=Msa1050920-mRNA-1;Parent=Msa1050920;Name=Msa1050920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=77|1|0.5|1|1|1|2|0|484
chr7_2 exon 17121998 17122246 17121998 ID=Msa1050920-mRNA-1:exon:3823;Parent=Msa1050920-mRNA-1
chr7_2 exon 17122850 17124132 17122850 ID=Msa1050920-mRNA-1:exon:3824;Parent=Msa1050920-mRNA-1
chr7_2 five_prime_UTR 17121998 17122074 17121998 ID=Msa1050920-mRNA-1:five_prime_utr;Parent=Msa1050920-mRNA-1
chr7_2 CDS 17122075 17122246 17122075 ID=Msa1050920-mRNA-1:cds;Parent=Msa1050920-mRNA-1
chr7_2 CDS 17122850 17124132 17122850 ID=Msa1050920-mRNA-1:cds;Parent=Msa1050920-mRNA-1
Gene Sequence

>Msa1050920

ATGTCTTGGTTTCTTGTAATACTGTTTTTGATTGTAACATTTGGTACATTTTCTGAGGCTAGTCATCATCATCATCATCACAAGAAGCCTCTTTCTGCTGTTGTGGTTGGTACTGTTTATTGTGACACATGTTTTCAACAGGATTTCTCCATGGGAAATCATTTCATTTCAGGTGCATCAGTTGAAGTAGAATGCAAAGATGGAAATGAAAATTCAAAACCAAGATTCAAGAAACAAGTAAAAACAAATGAACATGGTGAATTCAAAATCCAACTTCCATTCTCAGTGAGCAAACATGTAAGAAGAATCAAAGGATGTGTAGTGAAATTAGTAAGCAGCAATGAACCATTTTGTTCTATAGCCTCAGCAGCCTCATCTTCATCACTTCACCTAAAATCAAGAAAACAAGGACTACACATATTCTCAGCAGGGTTTTTCTCATTCAAACCACTTAAACAACCAAATCTATGTAACCAAAAACCAAGTGTTGATCGAAACACAAAAAAGGTTATTGATTCTTTGGAAAAAACTTCACTTCCTCCAAAAATTGATCCTTCTTTCCCACCCCCACTTCAAGATCCAAACCCCCCTAGTGGTGTTCTTCCTTTCCTCCCACCAGTTCCTTTAGCACCTGAAATTCTTACACCAATATTGCCACCAGAATTGTCACCACTAATCCCTAGTGGAATGACTAATGAAGAATCTAAATACAAATCAACTAAAAGTTCAAAAAATGTTCAATCTTTAGATGAAAAAAAAGTAATTAACCTTGATACTTTTCACATTCCTCCTAATCCATTTTTCCCACCACCATTAGTCCCTAATAATCCATTACAACCACCAAGTACACCAACTATTCCTAATCCATTTCAACCACCACCATTAGTTCCTAATAATCCATTACAACCACCAACATTAGTCCCTAATCCACCACCATTAGTCCCTAATAATCCACCACAACCACCAAGTACACCACATTCTCCTGATCCATTTCATCCAACAATTCCTTTATTACATCAAATTCTTCCACCAATATTGTCACCATTAGTCCCTAGTGGAAAGGCTAGTGATGAATCCAAATCAAAATCAACAAAAACTACAAAAAATGTTCAATCATTAGATGAAAAAAAAGCACCTAACCTTGATTCCTTTAACCTTCCTCCTAATCCATTTTTTCCACCACCATTAGTCCCTAATAATCCATTACAACCACCAAGTACACCAACAATTCCTAACCCATTTCAACCACCAACTCCAACACCATTAGTCCCTAATAATCCATTTCAGCCACCTCCATCAGGATCATCACCATTGTTTCCTTTTCCGTCGGTACCAGGTTTAAGTCCTTCACCACCACCTTCATCACCACCAGGATTGGCTTTTCCTTTTCCTCCACTATTCCCTCCACCTGGCAGTGGCACACCTCCCGCTTCTACAAAGAATATTTCTCCTTAA

Protein sequence

>Msa1050920

MSWFLVILFLIVTFGTFSEASHHHHHHKKPLSAVVVGTVYCDTCFQQDFSMGNHFISGASVEVECKDGNENSKPRFKKQVKTNEHGEFKIQLPFSVSKHVRRIKGCVVKLVSSNEPFCSIASAASSSSLHLKSRKQGLHIFSAGFFSFKPLKQPNLCNQKPSVDRNTKKVIDSLEKTSLPPKIDPSFPPPLQDPNPPSGVLPFLPPVPLAPEILTPILPPELSPLIPSGMTNEESKYKSTKSSKNVQSLDEKKVINLDTFHIPPNPFFPPPLVPNNPLQPPSTPTIPNPFQPPPLVPNNPLQPPTLVPNPPPLVPNNPPQPPSTPHSPDPFHPTIPLLHQILPPILSPLVPSGKASDESKSKSTKTTKNVQSLDEKKAPNLDSFNLPPNPFFPPPLVPNNPLQPPSTPTIPNPFQPPTPTPLVPNNPFQPPPSGSSPLFPFPSVPGLSPSPPPSSPPGLAFPFPPLFPPPGSGTPPASTKNISP*