AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0230400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230400 MtrunA17_Chr2g0286341 93.651 189 12 0 1 189 1 189 3.19e-123 345
Msa0230400 MtrunA17_Chr4g0066721 61.905 147 55 1 21 166 31 177 3.44e-60 186
Msa0230400 MtrunA17_Chr7g0268681 42.857 182 93 3 11 189 17 190 6.52e-43 142
Msa0230400 MtrunA17_Chr8g0381001 36.552 145 89 2 25 167 28 171 1.56e-24 95.1
Msa0230400 MtrunA17_Chr4g0066711 37.692 130 76 2 62 187 56 184 1.53e-22 89.7
Msa0230400 MtrunA17_Chr2g0303151 31.579 152 101 3 25 174 29 179 6.03e-16 72.4
Msa0230400 MtrunA17_Chr4g0021111 30.128 156 94 3 23 178 8 148 5.38e-14 66.6
Msa0230400 MtrunA17_Chr7g0217691 32.335 167 99 4 25 187 30 186 3.29e-13 65.1
Msa0230400 MtrunA17_Chr7g0251531 27.778 162 104 2 26 184 33 184 7.24e-12 61.2
Msa0230400 MtrunA17_Chr4g0042551 25.444 169 110 3 25 188 61 218 3.95e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230400 AT4G15630.1 48.108 185 88 2 1 184 12 189 3.07e-51 163
Msa0230400 AT4G15620.1 46.486 185 91 4 1 184 12 189 3.12e-47 153
Msa0230400 AT4G15610.1 34.194 155 87 5 22 168 25 172 1.04e-19 82.8
Msa0230400 AT3G06390.1 34.815 135 81 2 25 156 39 169 2.17e-18 79.3
Msa0230400 AT5G44550.1 30.719 153 101 3 25 174 20 170 5.37e-14 67.8
Msa0230400 AT4G15610.2 36.170 94 57 1 78 168 23 116 8.95e-13 63.2
Msa0230400 AT4G20390.1 33.088 136 88 3 25 158 20 154 9.27e-13 64.3
Msa0230400 AT1G14160.1 29.091 165 107 3 25 187 53 209 1.25e-12 64.3
Msa0230400 AT5G15290.1 31.126 151 86 4 24 170 29 165 6.82e-12 61.6

Find 59 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATTTCTGTTAGATTTA+AGG 0.145343 2_2:+2604801 Msa0230400:three_prime_UTR
GCATGTTTGATTTCACTTCT+TGG 0.164285 2_2:+2604482 Msa0230400:CDS
GTTGAATGAAATTTAAGATA+TGG 0.255413 2_2:-2599387 None:intergenic
GTTATTTGTTGGTTACATTT+TGG 0.274957 2_2:+2604849 Msa0230400:three_prime_UTR
ATTGTAACGTTAATAACTTA+TGG 0.283326 2_2:-2604874 None:intergenic
TTAAGGCTTAATTACTCTTT+TGG 0.286880 2_2:+2604818 Msa0230400:three_prime_UTR
TTCAGATTCTTTACCACCTT+TGG 0.287155 2_2:+2599759 Msa0230400:CDS
GAACTTGTAGTTTGGTTCTA+AGG 0.290000 2_2:+2599656 Msa0230400:CDS
TTCATTATTGCTCTTGCAAA+TGG 0.304694 2_2:+2604278 Msa0230400:CDS
AATGGAGCTGCCTGGGCTAT+TGG 0.310330 2_2:+2604374 Msa0230400:CDS
AGAACCTAGATGCATGCTTT+TGG 0.342267 2_2:+2604560 Msa0230400:exon
TTGTAACGTTAATAACTTAT+GGG 0.344267 2_2:-2604873 None:intergenic
CTCTGGCAATGGAGCTGCCT+GGG 0.353297 2_2:+2604367 Msa0230400:CDS
AAGTTATTAACGTTACAATT+TGG 0.356198 2_2:+2604878 Msa0230400:three_prime_UTR
GGTTCTAAGGCTTTGTGCCT+TGG 0.356571 2_2:+2599669 Msa0230400:CDS
TCTCTGGCAATGGAGCTGCC+TGG 0.366116 2_2:+2604366 Msa0230400:CDS
AAAGAATCTGAAATCTTAAC+AGG 0.366713 2_2:-2599748 None:intergenic
TGTAACCAACAAATAACTTA+AGG 0.379096 2_2:-2604843 None:intergenic
ACTAGAAGGAACTTGTAGTT+TGG 0.383357 2_2:+2599648 Msa0230400:CDS
TGCCTTGGTTCTAACACTTA+CGG 0.396121 2_2:+2599684 Msa0230400:CDS
ATGCACACGTTACATCTTGC+TGG 0.398008 2_2:+2599260 Msa0230400:five_prime_UTR
GACTCTACTTGACGCAATAA+TGG 0.402079 2_2:+2604331 Msa0230400:CDS
TATTGCCACTTAGCAGTAAC+AGG 0.403955 2_2:-2599787 None:intergenic
TGGTCCCTTAAGTTATTTGT+TGG 0.407748 2_2:+2604838 Msa0230400:three_prime_UTR
TCAAAGTAGTAAAGAGTTGA+AGG 0.416149 2_2:+2599603 Msa0230400:CDS
ATGGTAGCTTTGCTCTTCTC+TGG 0.423813 2_2:+2604350 Msa0230400:CDS
TTATTTCTTTGTAACATTTG+TGG 0.429807 2_2:+2604707 Msa0230400:three_prime_UTR
TTTCATTCAACATAAATAAG+TGG 0.447907 2_2:+2599399 Msa0230400:five_prime_UTR
GTAACCAACAAATAACTTAA+GGG 0.464278 2_2:-2604842 None:intergenic
GCTTTGCTCTTCTCTGGCAA+TGG 0.475961 2_2:+2604356 Msa0230400:CDS
TCATTATTGCTCTTGCAAAT+GGG 0.478620 2_2:+2604279 Msa0230400:CDS
CAAATGGGCATAAAAGCAAA+TGG 0.489917 2_2:+2604294 Msa0230400:CDS
AGATCTTGTCAATAATTGCT+AGG 0.499264 2_2:-2599437 None:intergenic
TGACATAATAATGTTGATGT+TGG 0.509693 2_2:+2604683 Msa0230400:three_prime_UTR
TAGAAATGTGATTAAAATGA+TGG 0.510564 2_2:-2599288 None:intergenic
ATTGGTGTCCTTGCTGAGAA+AGG 0.524437 2_2:+2604392 Msa0230400:CDS
AAGATGAACATAAGAGGCAT+TGG 0.526096 2_2:-2599313 None:intergenic
TAAAGAGTTGAAGGAAATTG+TGG 0.527493 2_2:+2599612 Msa0230400:CDS
AAGCAAATGGTTAGTGACAT+TGG 0.532245 2_2:+2604307 Msa0230400:CDS
AAGGAAACTCACATGTGCTA+TGG 0.533697 2_2:+2604411 Msa0230400:CDS
GTGGTAAAGTCTTCACTAGA+AGG 0.536766 2_2:+2599634 Msa0230400:CDS
TGATAAAAGATGAACATAAG+AGG 0.541084 2_2:-2599319 None:intergenic
CTTCGATGAAGTCTCAAAGC+AGG 0.542570 2_2:-2604536 None:intergenic
GTCTCCAAAAGCATGCATCT+AGG 0.543676 2_2:-2604564 None:intergenic
GATCTTGTCAATAATTGCTA+GGG 0.545108 2_2:-2599436 None:intergenic
AGCAAGGACACCAATAGCCC+AGG 0.569795 2_2:-2604384 None:intergenic
TCAAACATGCAGCAGCAGCT+TGG 0.577464 2_2:-2604469 None:intergenic
ATGTTCCTGTTACTGCTAAG+TGG 0.581337 2_2:+2599782 Msa0230400:CDS
GTGAGTTTCCTTTCTCAGCA+AGG 0.583749 2_2:-2604400 None:intergenic
ACTCTTCTGAATATATCAGA+TGG 0.600770 2_2:-2599545 None:intergenic
AAATGTGATTAAAATGATGG+AGG 0.610594 2_2:-2599285 None:intergenic
CAGGAAGCATCACAAGAGAG+AGG 0.623721 2_2:-2604517 None:intergenic
GCAGTAACAGGAACATCCAA+AGG 0.629483 2_2:-2599775 None:intergenic
AGAGTTGAAGGAAATTGTGG+TGG 0.665080 2_2:+2599615 Msa0230400:CDS
AGCCGTAAGTGTTAGAACCA+AGG 0.675160 2_2:-2599686 None:intergenic
CATAAATAAGTGGTTCATCG+CGG 0.676765 2_2:+2599409 Msa0230400:five_prime_UTR
AATCTTAACAGGAACAACTG+TGG 0.694283 2_2:-2599737 None:intergenic
GTAACAGGAACATCCAAAGG+TGG 0.698112 2_2:-2599772 None:intergenic
AAGAGCAATAATGAAAGACA+AGG 0.698566 2_2:-2604270 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAGTCTTATATAATTA+AGG - chr2_2:2600048-2600067 None:intergenic 10.0%
!! AAATGATGTAAAATAAATAA+GGG - chr2_2:2600152-2600171 None:intergenic 10.0%
!! AAAATGATGTAAAATAAATA+AGG - chr2_2:2600153-2600172 None:intergenic 10.0%
!! AACTATATACAAAAAAAAAT+TGG + chr2_2:2600258-2600277 Msa0230400:intron 10.0%
!!! TTTTAATATATTTTCTTGTT+AGG - chr2_2:2600731-2600750 None:intergenic 10.0%
!! TAATAAAAATGAAAAAAATC+TGG + chr2_2:2601513-2601532 Msa0230400:intron 10.0%
!! TAAAAAAGATTAAAAAATTC+TGG + chr2_2:2601599-2601618 Msa0230400:intron 10.0%
!!! TTCTAAAAAAATTAAAATTC+TGG + chr2_2:2601643-2601662 Msa0230400:intron 10.0%
!!! TTTAAATTTTAATGAAATTC+TGG + chr2_2:2601686-2601705 Msa0230400:intron 10.0%
!! ATATATACTAATCAAAATTT+CGG + chr2_2:2602067-2602086 Msa0230400:intron 10.0%
!! TGAAAAAAATTAAAAAAATC+TGG - chr2_2:2602281-2602300 None:intergenic 10.0%
!! AAAAAAAGATTAAAAAATTC+TGG - chr2_2:2602309-2602328 None:intergenic 10.0%
!! TAAAAAAATTGAAAAAATTC+TGG - chr2_2:2602392-2602411 None:intergenic 10.0%
!! TTTAAAAACACATAAATTAA+AGG + chr2_2:2603044-2603063 Msa0230400:intron 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr2_2:2603436-2603455 Msa0230400:intron 10.0%
!!! ATAAGTAATTTTTTTTTTGT+AGG + chr2_2:2603496-2603515 Msa0230400:intron 10.0%
!!! TAAGTAATTTTTTTTTTGTA+GGG + chr2_2:2603497-2603516 Msa0230400:intron 10.0%
!!! TTCTAGTTTAATTTAATTTA+GGG - chr2_2:2603600-2603619 None:intergenic 10.0%
!!! ATTCTAGTTTAATTTAATTT+AGG - chr2_2:2603601-2603620 None:intergenic 10.0%
!! GAAAAAAAAAAAAAGTAAAA+TGG - chr2_2:2603846-2603865 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601220-2601239 None:intergenic 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601234-2601253 None:intergenic 100.0%
!!! TACTTTTGTTTACTATTTTT+GGG + chr2_2:2599567-2599586 Msa0230400:five_prime_UTR 15.0%
!! TAAGAAAATTGAGAAAATAA+AGG - chr2_2:2600008-2600027 None:intergenic 15.0%
!! AAAGAAATACTTAATGTAAT+TGG - chr2_2:2600120-2600139 None:intergenic 15.0%
!! TATATACAAAAAAAAATTGG+TGG + chr2_2:2600261-2600280 Msa0230400:intron 15.0%
!!! AAAATTTTACAAAGAAAATG+GGG - chr2_2:2600512-2600531 None:intergenic 15.0%
!!! CAAAATTTTACAAAGAAAAT+GGG - chr2_2:2600513-2600532 None:intergenic 15.0%
!! AAATAGCATAATAAAATGAA+TGG - chr2_2:2600869-2600888 None:intergenic 15.0%
!!! TGTATTTAAAATTTATGCTA+TGG - chr2_2:2600914-2600933 None:intergenic 15.0%
!! TAATAAATAATTGATGTGAT+TGG - chr2_2:2601006-2601025 None:intergenic 15.0%
!! GAAAAAAATAATGAGTAAAT+AGG + chr2_2:2601192-2601211 Msa0230400:intron 15.0%
!!! TTTTTAATTTTTCAAGTTCA+GGG - chr2_2:2602406-2602425 None:intergenic 15.0%
!!! TTTTTTAATTTTTCAAGTTC+AGG - chr2_2:2602405-2602424 None:intergenic 15.0%
!!! ATTTTCATTAGTATTTTTTC+CGG + chr2_2:2601953-2601972 Msa0230400:intron 15.0%
!! GAAAAATAATGAAAAAATTC+TGG - chr2_2:2601570-2601589 None:intergenic 15.0%
!!! ACATTATTTTTTGAGTAAAT+AGG - chr2_2:2602612-2602631 None:intergenic 15.0%
!!! TATTAAAGAAAATTTTGTAG+CGG - chr2_2:2602999-2603018 None:intergenic 15.0%
!!! ATTTTGTGTTTAAAAATAAG+AGG - chr2_2:2603071-2603090 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr2_2:2603114-2603133 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr2_2:2603186-2603205 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr2_2:2603305-2603324 None:intergenic 15.0%
!!! TTAAACAAAATTATTTTAGC+AGG + chr2_2:2603463-2603482 Msa0230400:intron 15.0%
!!! TAAACAAAATTATTTTAGCA+GGG + chr2_2:2603464-2603483 Msa0230400:intron 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG + chr2_2:2603526-2603545 Msa0230400:intron 15.0%
!! ATATACAACGAAATAAAAAT+CGG + chr2_2:2603642-2603661 Msa0230400:intron 15.0%
!!! TAATTTTTCTTTCGTTTATT+AGG + chr2_2:2604207-2604226 Msa0230400:intron 15.0%
!!! AATTTTTTTTGGATTAAACA+AGG - chr2_2:2604589-2604608 None:intergenic 15.0%
!!! ATCAATCACATAATTTTTTT+TGG - chr2_2:2604600-2604619 None:intergenic 15.0%
!! TAGAAATGTGATTAAAATGA+TGG - chr2_2:2599291-2599310 None:intergenic 20.0%
!!! GTTGAATGAAATTTAAGATA+TGG - chr2_2:2599390-2599409 None:intergenic 20.0%
!! TTTCATTCAACATAAATAAG+TGG + chr2_2:2599399-2599418 Msa0230400:five_prime_UTR 20.0%
!!! GTACTTTTGTTTACTATTTT+TGG + chr2_2:2599566-2599585 Msa0230400:five_prime_UTR 20.0%
!! TCTCAATGCATATAATTAAT+GGG - chr2_2:2599955-2599974 None:intergenic 20.0%
!! TTCTCAATGCATATAATTAA+TGG - chr2_2:2599956-2599975 None:intergenic 20.0%
!!! ATGTTCAAATTACTTTTGTT+TGG + chr2_2:2599978-2599997 Msa0230400:intron 20.0%
!!! CCAAAAAAGTCTTATAAAAA+GGG - chr2_2:2600092-2600111 None:intergenic 20.0%
!!! ACCAAAAAAGTCTTATAAAA+AGG - chr2_2:2600093-2600112 None:intergenic 20.0%
!! CAATGCATATAATATATGTA+GGG - chr2_2:2600309-2600328 None:intergenic 20.0%
!! ACAATGCATATAATATATGT+AGG - chr2_2:2600310-2600329 None:intergenic 20.0%
!! TCACAAAAGTTGTTAAAAAA+TGG - chr2_2:2600418-2600437 None:intergenic 20.0%
!!! GCAAAATTTTACAAAGAAAA+TGG - chr2_2:2600514-2600533 None:intergenic 20.0%
!!! AAAATGGTTCTATATTAACA+AGG + chr2_2:2600587-2600606 Msa0230400:intron 20.0%
!!! AACTAGCTTTAAATCTTATA+TGG + chr2_2:2600787-2600806 Msa0230400:intron 20.0%
!!! ATTTTTCTGTTAACTGTTTA+CGG + chr2_2:2601349-2601368 Msa0230400:intron 20.0%
!!! ATTCTGGAAAATAAAAATTC+TGG + chr2_2:2601702-2601721 Msa0230400:intron 20.0%
!! ATTCTCGAAAATAAAAATTC+TGG + chr2_2:2601727-2601746 Msa0230400:intron 20.0%
!! CGAAAATAAAAATGAAATTC+TGG + chr2_2:2601780-2601799 Msa0230400:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr2_2:2601877-2601896 Msa0230400:intron 20.0%
!!! TTTTCATTAGTATTTTTTCC+GGG + chr2_2:2601954-2601973 Msa0230400:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG - chr2_2:2601975-2601994 None:intergenic 20.0%
!! ATAAATACACAAAAAGTTCT+CGG - chr2_2:2602000-2602019 None:intergenic 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr2_2:2601877-2601896 Msa0230400:intron 20.0%
!! TTAGTATATATATCGAACTT+AGG - chr2_2:2602058-2602077 None:intergenic 20.0%
!!! TTTTAATTTTTCAAGTTCAG+AGG + chr2_2:2602407-2602426 Msa0230400:intron 20.0%
!!! TTTAATTTTTCAAGTTCAGA+GGG + chr2_2:2602408-2602427 Msa0230400:intron 20.0%
!!! ATTTTTCTGTTAACTGTTTA+CGG - chr2_2:2601349-2601368 None:intergenic 20.0%
!! AATATAAATGCGTTGAAAAT+GGG - chr2_2:2602717-2602736 None:intergenic 20.0%
!! AAATATAAATGCGTTGAAAA+TGG - chr2_2:2602718-2602737 None:intergenic 20.0%
!! TTTCAACGCATTTATATTTA+CGG + chr2_2:2602719-2602738 Msa0230400:intron 20.0%
!! ATGTTGTTATACAACTTTAA+AGG + chr2_2:2602866-2602885 Msa0230400:intron 20.0%
!!! TGATAATTAGTTTACAAAAG+AGG - chr2_2:2602911-2602930 None:intergenic 20.0%
!! AAACAAATTTGGATTGAATA+AGG - chr2_2:2603175-2603194 None:intergenic 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr2_2:2603584-2603603 None:intergenic 20.0%
!!! TTATTTCTTTGTAACATTTG+TGG + chr2_2:2604707-2604726 Msa0230400:three_prime_UTR 20.0%
!!! TTGTATTTCTGTTAGATTTA+AGG + chr2_2:2604801-2604820 Msa0230400:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr2_2:2604876-2604895 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr2_2:2604877-2604896 None:intergenic 20.0%
! AAATGTGATTAAAATGATGG+AGG - chr2_2:2599288-2599307 None:intergenic 25.0%
! TGATAAAAGATGAACATAAG+AGG - chr2_2:2599322-2599341 None:intergenic 25.0%
! TGGAACAACATATCTAAAAA+CGG - chr2_2:2599370-2599389 None:intergenic 25.0%
!!! AATAGTGTTGATACCAAAAA+TGG - chr2_2:2599480-2599499 None:intergenic 25.0%
!!! AATGAAGATTGTTTTGCAAA+AGG - chr2_2:2599519-2599538 None:intergenic 25.0%
!!! TTACTATTTTTGGGAAGTAA+TGG + chr2_2:2599576-2599595 Msa0230400:exon 25.0%
!! AAAGAATCTGAAATCTTAAC+AGG - chr2_2:2599751-2599770 None:intergenic 25.0%
! TTAAGAACATGATAGAAAGA+GGG - chr2_2:2599858-2599877 None:intergenic 25.0%
! ATTAAGAACATGATAGAAAG+AGG - chr2_2:2599859-2599878 None:intergenic 25.0%
!! CCCTTTTTATAAGACTTTTT+TGG + chr2_2:2600089-2600108 Msa0230400:intron 25.0%
! ATACAAAAAAAAATTGGTGG+TGG + chr2_2:2600264-2600283 Msa0230400:intron 25.0%
! AAATATCATTTCACAGTTGT+TGG - chr2_2:2600389-2600408 None:intergenic 25.0%
! AGTTAAAACATAATGTGAGT+AGG - chr2_2:2600454-2600473 None:intergenic 25.0%
!!! ACTTTTTCTCTCTATTGATT+TGG + chr2_2:2600471-2600490 Msa0230400:intron 25.0%
!!! CTTTTTCTCTCTATTGATTT+GGG + chr2_2:2600472-2600491 Msa0230400:intron 25.0%
!! TAAAATTTTGCTTGTCACAA+AGG + chr2_2:2600523-2600542 Msa0230400:intron 25.0%
! TCGTGATGTTAATTACTTAA+TGG + chr2_2:2601052-2601071 Msa0230400:intron 25.0%
! AATGAAATGTTATAGAAGCA+TGG + chr2_2:2601134-2601153 Msa0230400:intron 25.0%
! ACAGTTAACAGAAAAATTGA+CGG - chr2_2:2602483-2602502 None:intergenic 25.0%
!! ATAAGTGTAAAATTTCAGGT+GGG - chr2_2:2601388-2601407 None:intergenic 25.0%
! TATAAGTGTAAAATTTCAGG+TGG - chr2_2:2601389-2601408 None:intergenic 25.0%
! GCATATAAGTGTAAAATTTC+AGG - chr2_2:2601392-2601411 None:intergenic 25.0%
! GTATTTATAAACCGAGAATA+AGG + chr2_2:2601876-2601895 Msa0230400:intron 25.0%
! ATACATAAAAAACCTAAGCT+CGG - chr2_2:2601925-2601944 None:intergenic 25.0%
! GTATTTATAAACCGAGAATA+AGG + chr2_2:2601876-2601895 Msa0230400:intron 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG - chr2_2:2602026-2602045 None:intergenic 25.0%
! CACATAAGTGTAAAATTTCA+GGG + chr2_2:2602438-2602457 Msa0230400:intron 25.0%
! ACATAAGTGTAAAATTTCAG+GGG + chr2_2:2602439-2602458 Msa0230400:intron 25.0%
! ACAGTTAACAGAAAAATTGA+CGG + chr2_2:2602483-2602502 Msa0230400:intron 25.0%
! ATTAACGTTATGCAATTTCA+GGG + chr2_2:2602519-2602538 Msa0230400:intron 25.0%
! AACAAAATACTGTGTATCTA+TGG - chr2_2:2602685-2602704 None:intergenic 25.0%
! ATATAAATGCGTTGAAAATG+GGG - chr2_2:2602716-2602735 None:intergenic 25.0%
!!! TAAAGGTAACTACTTTTTGA+TGG + chr2_2:2602883-2602902 Msa0230400:intron 25.0%
!!! AAAGGTAACTACTTTTTGAT+GGG + chr2_2:2602884-2602903 Msa0230400:intron 25.0%
!!! GAGTGCAAAATTTTTTTGTA+GGG - chr2_2:2603143-2603162 None:intergenic 25.0%
!!! TGAGTGCAAAATTTTTTTGT+AGG - chr2_2:2603144-2603163 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr2_2:2603240-2603259 Msa0230400:intron 25.0%
!!! TTTTGCGATATTTTTTTCAG+AGG - chr2_2:2603267-2603286 None:intergenic 25.0%
! AAGTAAGGACTAAAATTAGA+AGG + chr2_2:2603541-2603560 Msa0230400:intron 25.0%
! AAATTTGATTGTGCATACAT+AGG + chr2_2:2603898-2603917 Msa0230400:intron 25.0%
!! CTCGTTTAATCAACTATTTT+AGG - chr2_2:2604039-2604058 None:intergenic 25.0%
! TGACATAATAATGTTGATGT+TGG + chr2_2:2604683-2604702 Msa0230400:three_prime_UTR 25.0%
!! TTAAGGCTTAATTACTCTTT+TGG + chr2_2:2604818-2604837 Msa0230400:three_prime_UTR 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr2_2:2604845-2604864 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr2_2:2604846-2604865 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr2_2:2604849-2604868 Msa0230400:three_prime_UTR 25.0%
GATCTTGTCAATAATTGCTA+GGG - chr2_2:2599439-2599458 None:intergenic 30.0%
AGATCTTGTCAATAATTGCT+AGG - chr2_2:2599440-2599459 None:intergenic 30.0%
!! ATTTGTTACCCAACCATTTT+TGG + chr2_2:2599464-2599483 Msa0230400:five_prime_UTR 30.0%
TGTTGATACCAAAAATGGTT+GGG - chr2_2:2599475-2599494 None:intergenic 30.0%
ACTCTTCTGAATATATCAGA+TGG - chr2_2:2599548-2599567 None:intergenic 30.0%
TCAAAGTAGTAAAGAGTTGA+AGG + chr2_2:2599603-2599622 Msa0230400:CDS 30.0%
TAAAGAGTTGAAGGAAATTG+TGG + chr2_2:2599612-2599631 Msa0230400:CDS 30.0%
GGGAAATATAACTTACACAT+AGG - chr2_2:2599821-2599840 None:intergenic 30.0%
AGAGGGAACAATCTATTTAA+GGG - chr2_2:2599841-2599860 None:intergenic 30.0%
AAGAGGGAACAATCTATTTA+AGG - chr2_2:2599842-2599861 None:intergenic 30.0%
TAAACTAACTCTTGCTCTTA+AGG + chr2_2:2600213-2600232 Msa0230400:intron 30.0%
AACACAACTCTTTAGCAAAA+TGG + chr2_2:2600571-2600590 Msa0230400:intron 30.0%
GGTTCTATATTAACAAGGTT+CGG + chr2_2:2600592-2600611 Msa0230400:intron 30.0%
! GGACAATTTTGTTGCATTTT+TGG - chr2_2:2600848-2600867 None:intergenic 30.0%
TTTGACAAACCTTGCAATTT+CGG - chr2_2:2601254-2601273 None:intergenic 30.0%
TTGATGTTTCGTTAACTACA+GGG - chr2_2:2602548-2602567 None:intergenic 30.0%
ATTGATGTTTCGTTAACTAC+AGG - chr2_2:2602547-2602566 None:intergenic 30.0%
GATTAACGTTATGCAATTTC+AGG - chr2_2:2602518-2602537 None:intergenic 30.0%
TTAACAGAAAAATTGACGGA+GGG - chr2_2:2602487-2602506 None:intergenic 30.0%
!!! CATACTTTTTCCCTTATTCT+CGG - chr2_2:2601890-2601909 None:intergenic 30.0%
TGTATTTATAAACCGAGCTT+AGG + chr2_2:2601910-2601929 Msa0230400:intron 30.0%
ATGTCGAAATTTCGAAATTC+TGG - chr2_2:2602115-2602134 None:intergenic 30.0%
GCACATAAGTGTAAAATTTC+AGG + chr2_2:2602437-2602456 Msa0230400:intron 30.0%
CATAAGTGTAAAATTTCAGG+GGG + chr2_2:2602440-2602459 Msa0230400:intron 30.0%
ATAAGTGTAAAATTTCAGGG+GGG + chr2_2:2602441-2602460 Msa0230400:intron 30.0%
TTAACAGAAAAATTGACGGA+GGG + chr2_2:2602487-2602506 Msa0230400:intron 30.0%
GATTAACGTTATGCAATTTC+AGG + chr2_2:2602518-2602537 Msa0230400:intron 30.0%
TTAACGTTATGCAATTTCAG+GGG + chr2_2:2602520-2602539 Msa0230400:intron 30.0%
ATTGATGTTTCGTTAACTAC+AGG + chr2_2:2602547-2602566 Msa0230400:intron 30.0%
TTGATGTTTCGTTAACTACA+GGG + chr2_2:2602548-2602567 Msa0230400:intron 30.0%
GCATTTATATTTACGGTTAC+CGG + chr2_2:2602726-2602745 Msa0230400:intron 30.0%
!! AAGTATGGTTGAGTTTTATG+GGG - chr2_2:2602804-2602823 None:intergenic 30.0%
!! CAAGTATGGTTGAGTTTTAT+GGG - chr2_2:2602805-2602824 None:intergenic 30.0%
! ACAAGTATGGTTGAGTTTTA+TGG - chr2_2:2602806-2602825 None:intergenic 30.0%
CTTATTAATGGCAACAAGTA+TGG - chr2_2:2602819-2602838 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr2_2:2603099-2603118 None:intergenic 30.0%
! TAGAAGGTCGCAATTTTATA+TGG + chr2_2:2603557-2603576 Msa0230400:intron 30.0%
CATTTAACCCACTAAAAAGA+GGG - chr2_2:2603968-2603987 None:intergenic 30.0%
TCATTTAACCCACTAAAAAG+AGG - chr2_2:2603969-2603988 None:intergenic 30.0%
!!! TCTTTTTAGTGGGTTAAATG+AGG + chr2_2:2603968-2603987 Msa0230400:intron 30.0%
! TTTTAGGCTGATTGAATTTG+AGG - chr2_2:2604023-2604042 None:intergenic 30.0%
AATAGTTGATTAAACGAGCT+AGG + chr2_2:2604041-2604060 Msa0230400:intron 30.0%
ATAGTTGATTAAACGAGCTA+GGG + chr2_2:2604042-2604061 Msa0230400:intron 30.0%
TTGGCTAAAGTAGTCATATT+TGG + chr2_2:2604089-2604108 Msa0230400:intron 30.0%
TGGCTAAAGTAGTCATATTT+GGG + chr2_2:2604090-2604109 Msa0230400:intron 30.0%
GTAGTAAGATGTCAAAAACA+TGG - chr2_2:2604124-2604143 None:intergenic 30.0%
AAGAGCAATAATGAAAGACA+AGG - chr2_2:2604273-2604292 None:intergenic 30.0%
TTCATTATTGCTCTTGCAAA+TGG + chr2_2:2604278-2604297 Msa0230400:CDS 30.0%
TCATTATTGCTCTTGCAAAT+GGG + chr2_2:2604279-2604298 Msa0230400:CDS 30.0%
! AAGATGAACATAAGAGGCAT+TGG - chr2_2:2599316-2599335 None:intergenic 35.0%
!!! AGTAGCTGGAAGTTTTTTGT+TGG - chr2_2:2599345-2599364 None:intergenic 35.0%
ATCTAAAAACGGTTAGTAGC+TGG - chr2_2:2599359-2599378 None:intergenic 35.0%
CATAAATAAGTGGTTCATCG+CGG + chr2_2:2599409-2599428 Msa0230400:five_prime_UTR 35.0%
! GTGTTGATACCAAAAATGGT+TGG - chr2_2:2599476-2599495 None:intergenic 35.0%
!!! CTATTTTTGGGAAGTAATGG+AGG + chr2_2:2599579-2599598 Msa0230400:exon 35.0%
ACTAGAAGGAACTTGTAGTT+TGG + chr2_2:2599648-2599667 Msa0230400:CDS 35.0%
!! GAACTTGTAGTTTGGTTCTA+AGG + chr2_2:2599656-2599675 Msa0230400:CDS 35.0%
AATCTTAACAGGAACAACTG+TGG - chr2_2:2599740-2599759 None:intergenic 35.0%
TTCAGATTCTTTACCACCTT+TGG + chr2_2:2599759-2599778 Msa0230400:CDS 35.0%
!! AAAAAAAAATTGGTGGTGGC+CGG + chr2_2:2600268-2600287 Msa0230400:intron 35.0%
! CGAACTTAACTTAGTTGGTA+GGG - chr2_2:2600333-2600352 None:intergenic 35.0%
TATCGCGAACTTAACTTAGT+TGG - chr2_2:2600338-2600357 None:intergenic 35.0%
TTGACAAACCTTGCAATTTC+GGG - chr2_2:2601253-2601272 None:intergenic 35.0%
TGATGTTTCGTTAACTACAG+GGG - chr2_2:2602549-2602568 None:intergenic 35.0%
AACGTTATGCAATTTCAGGA+GGG - chr2_2:2601307-2601326 None:intergenic 35.0%
TAACGTTATGCAATTTCAGG+AGG - chr2_2:2602521-2602540 None:intergenic 35.0%
TAACAGAAAAATTGACGGAG+GGG - chr2_2:2602488-2602507 None:intergenic 35.0%
GTTAACAGAAAAATTGACGG+AGG - chr2_2:2602486-2602505 None:intergenic 35.0%
GTTAACAGAAAAATTGACGG+AGG + chr2_2:2602486-2602505 Msa0230400:intron 35.0%
TAACAGAAAAATTGACGGAG+GGG + chr2_2:2602488-2602507 Msa0230400:intron 35.0%
TAACGTTATGCAATTTCAGG+GGG + chr2_2:2602521-2602540 Msa0230400:intron 35.0%
TGATGTTTCGTTAACTACAG+GGG + chr2_2:2602549-2602568 Msa0230400:intron 35.0%
TGACAAACCTTACAATTTCG+AGG + chr2_2:2602578-2602597 Msa0230400:intron 35.0%
GACAAACCTTACAATTTCGA+GGG + chr2_2:2602579-2602598 Msa0230400:intron 35.0%
ACAAACCTTACAATTTCGAG+GGG + chr2_2:2602580-2602599 Msa0230400:intron 35.0%
AATTTCCCCTCGAAATTGTA+AGG - chr2_2:2602588-2602607 None:intergenic 35.0%
ATACTGTGTATCTATGGAGA+AGG - chr2_2:2602679-2602698 None:intergenic 35.0%
ACCAAATAGAAATGCATGGT+TGG - chr2_2:2602762-2602781 None:intergenic 35.0%
ACCATGCATTTCTATTTGGT+TGG + chr2_2:2602762-2602781 Msa0230400:intron 35.0%
! ATTTCTATTTGGTTGGCTGA+TGG + chr2_2:2602769-2602788 Msa0230400:intron 35.0%
! CAAGTTTAGAACACTATGAC+AGG - chr2_2:2603402-2603421 None:intergenic 35.0%
CGAAATAAAAATCGGATCGA+CGG + chr2_2:2603650-2603669 Msa0230400:intron 35.0%
GTATGCACAATCAAATTTGC+TGG - chr2_2:2603896-2603915 None:intergenic 35.0%
!!! TTTTAGTGGGTTAAATGAGG+CGG + chr2_2:2603971-2603990 Msa0230400:intron 35.0%
!!! TGAATTTGAGGTTTTGAACC+TGG - chr2_2:2604011-2604030 None:intergenic 35.0%
AAAGTTAGAGGTGGAAAAAC+GGG - chr2_2:2604071-2604090 None:intergenic 35.0%
CAAAGTTAGAGGTGGAAAAA+CGG - chr2_2:2604072-2604091 None:intergenic 35.0%
ACTACTTTAGCCAAAGTTAG+AGG - chr2_2:2604083-2604102 None:intergenic 35.0%
CAAATGGGCATAAAAGCAAA+TGG + chr2_2:2604294-2604313 Msa0230400:CDS 35.0%
AAGCAAATGGTTAGTGACAT+TGG + chr2_2:2604307-2604326 Msa0230400:CDS 35.0%
! GCATGTTTGATTTCACTTCT+TGG + chr2_2:2604482-2604501 Msa0230400:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_2:2604838-2604857 Msa0230400:three_prime_UTR 35.0%
AGAGTTGAAGGAAATTGTGG+TGG + chr2_2:2599615-2599634 Msa0230400:CDS 40.0%
GTGGTAAAGTCTTCACTAGA+AGG + chr2_2:2599634-2599653 Msa0230400:CDS 40.0%
!! TGCCTTGGTTCTAACACTTA+CGG + chr2_2:2599684-2599703 Msa0230400:CDS 40.0%
ATGTTCCTGTTACTGCTAAG+TGG + chr2_2:2599782-2599801 Msa0230400:CDS 40.0%
! TATTGCCACTTAGCAGTAAC+AGG - chr2_2:2599790-2599809 None:intergenic 40.0%
!! AAAAAAAATTGGTGGTGGCC+GGG + chr2_2:2600269-2600288 Msa0230400:intron 40.0%
GCGAACTTAACTTAGTTGGT+AGG - chr2_2:2600334-2600353 None:intergenic 40.0%
! GGTTCGGCTCTAGTATTTAT+AGG + chr2_2:2600608-2600627 Msa0230400:intron 40.0%
AATCGATCATATATGCCCCA+CGG + chr2_2:2600640-2600659 Msa0230400:intron 40.0%
TGACAAACCTTGCAATTTCG+GGG - chr2_2:2601252-2601271 None:intergenic 40.0%
GATGTTTCGTTAACTACAGG+GGG - chr2_2:2602550-2602569 None:intergenic 40.0%
AACAGAAAAATTGACGGAGG+GGG - chr2_2:2602489-2602508 None:intergenic 40.0%
AACAGAAAAATTGACGGAGG+GGG + chr2_2:2602489-2602508 Msa0230400:intron 40.0%
AACGTTATGCAATTTCAGGG+GGG + chr2_2:2602522-2602541 Msa0230400:intron 40.0%
GATGTTTCGTTAACTACAGG+GGG + chr2_2:2602550-2602569 Msa0230400:intron 40.0%
GTGTATCTATGGAGAAGGAA+TGG - chr2_2:2602674-2602693 None:intergenic 40.0%
GCCAACCATGCATTTCTATT+TGG + chr2_2:2602758-2602777 Msa0230400:intron 40.0%
GCCAACCAAATAGAAATGCA+TGG - chr2_2:2602766-2602785 None:intergenic 40.0%
GTGAGTCGCGATCTTATTAA+TGG - chr2_2:2602831-2602850 None:intergenic 40.0%
!! TGTGGCGGTTATTTCTAAAG+TGG + chr2_2:2603678-2603697 Msa0230400:intron 40.0%
!! GTGGCGGTTATTTCTAAAGT+GGG + chr2_2:2603679-2603698 Msa0230400:intron 40.0%
GCATACATAGGCTTGACAAA+TGG + chr2_2:2603910-2603929 Msa0230400:intron 40.0%
TAACCCACTAAAAAGAGGGA+CGG - chr2_2:2603964-2603983 None:intergenic 40.0%
! CGTTTTTCCACCTCTAACTT+TGG + chr2_2:2604070-2604089 Msa0230400:intron 40.0%
ACTTTAGCCAAAGTTAGAGG+TGG - chr2_2:2604080-2604099 None:intergenic 40.0%
GACTCTACTTGACGCAATAA+TGG + chr2_2:2604331-2604350 Msa0230400:CDS 40.0%
AAGGAAACTCACATGTGCTA+TGG + chr2_2:2604411-2604430 Msa0230400:CDS 40.0%
! AGAACCTAGATGCATGCTTT+TGG + chr2_2:2604560-2604579 Msa0230400:exon 40.0%
ATGCACACGTTACATCTTGC+TGG + chr2_2:2599260-2599279 Msa0230400:five_prime_UTR 45.0%
AGCCGTAAGTGTTAGAACCA+AGG - chr2_2:2599689-2599708 None:intergenic 45.0%
GTAACAGGAACATCCAAAGG+TGG - chr2_2:2599775-2599794 None:intergenic 45.0%
GCAGTAACAGGAACATCCAA+AGG - chr2_2:2599778-2599797 None:intergenic 45.0%
ATCGATCATATATGCCCCAC+GGG + chr2_2:2600641-2600660 Msa0230400:intron 45.0%
ACAAACCTTGCAATTTCGGG+GGG - chr2_2:2601250-2601269 None:intergenic 45.0%
GACAAACCTTGCAATTTCGG+GGG - chr2_2:2601251-2601270 None:intergenic 45.0%
!! GCGGTTATTTCTAAAGTGGG+TGG + chr2_2:2603682-2603701 Msa0230400:intron 45.0%
ATAGGCTTGACAAATGGCCA+AGG + chr2_2:2603916-2603935 Msa0230400:intron 45.0%
TAGGCTTGACAAATGGCCAA+GGG + chr2_2:2603917-2603936 Msa0230400:intron 45.0%
AACCCACTAAAAAGAGGGAC+GGG - chr2_2:2603963-2603982 None:intergenic 45.0%
! ATGGTAGCTTTGCTCTTCTC+TGG + chr2_2:2604350-2604369 Msa0230400:CDS 45.0%
! ATTGGTGTCCTTGCTGAGAA+AGG + chr2_2:2604392-2604411 Msa0230400:CDS 45.0%
GTGAGTTTCCTTTCTCAGCA+AGG - chr2_2:2604403-2604422 None:intergenic 45.0%
CTTCGATGAAGTCTCAAAGC+AGG - chr2_2:2604539-2604558 None:intergenic 45.0%
! GTCTCCAAAAGCATGCATCT+AGG - chr2_2:2604567-2604586 None:intergenic 45.0%
!! TAACAAAATAATTAAATAAT+TGG - chr2_2:2600680-2600699 None:intergenic 5.0%
!!! TAAAAAAAATTGAAAAATTT+TGG + chr2_2:2601437-2601456 Msa0230400:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr2_2:2601477-2601496 Msa0230400:intron 5.0%
!!! TATTTTTAAATATAAGAAAT+CGG + chr2_2:2602943-2602962 Msa0230400:intron 5.0%
!!! TTATTGATTTTTTTTTTTTA+CGG - chr2_2:2604190-2604209 None:intergenic 5.0%
!! GGTTCTAAGGCTTTGTGCCT+TGG + chr2_2:2599669-2599688 Msa0230400:CDS 50.0%
AGGGTCCGACATTCAAATCC+CGG - chr2_2:2600290-2600309 None:intergenic 50.0%
AAACCTTGCAATTTCGGGGG+GGG - chr2_2:2601248-2601267 None:intergenic 50.0%
CAAACCTTGCAATTTCGGGG+GGG - chr2_2:2601249-2601268 None:intergenic 50.0%
!! CATGGTTGGCTCGAATTGAC+CGG - chr2_2:2602748-2602767 None:intergenic 50.0%
AGGCTTGACAAATGGCCAAG+GGG + chr2_2:2603918-2603937 Msa0230400:intron 50.0%
AAAGAGGGACGGGCCTAAAT+GGG - chr2_2:2603953-2603972 None:intergenic 50.0%
AAAAGAGGGACGGGCCTAAA+TGG - chr2_2:2603954-2603973 None:intergenic 50.0%
GCGGATAGACTTAAGAGACC+AGG + chr2_2:2603990-2604009 Msa0230400:intron 50.0%
GCTTTGCTCTTCTCTGGCAA+TGG + chr2_2:2604356-2604375 Msa0230400:CDS 50.0%
TCAAACATGCAGCAGCAGCT+TGG - chr2_2:2604472-2604491 None:intergenic 50.0%
!! CAGGAAGCATCACAAGAGAG+AGG - chr2_2:2604520-2604539 None:intergenic 50.0%
GGTGGCCGGGATTTGAATGT+CGG + chr2_2:2600282-2600301 Msa0230400:intron 55.0%
TCATATATGCCCCACGGGCT+AGG + chr2_2:2600646-2600665 Msa0230400:intron 55.0%
AACCTTGCAATTTCGGGGGG+GGG - chr2_2:2601247-2601266 None:intergenic 55.0%
ATCGGATCGACGGACACTTG+TGG + chr2_2:2603660-2603679 Msa0230400:intron 55.0%
TTGACAAATGGCCAAGGGGC+TGG + chr2_2:2603922-2603941 Msa0230400:intron 55.0%
AATGGGACATACCAGCCCCT+TGG - chr2_2:2603936-2603955 None:intergenic 55.0%
! GGGGCTGGTATGTCCCATTT+AGG + chr2_2:2603937-2603956 Msa0230400:intron 55.0%
! AGGCCCGTCCCTCTTTTTAG+TGG + chr2_2:2603957-2603976 Msa0230400:intron 55.0%
!! GGCCCGTCCCTCTTTTTAGT+GGG + chr2_2:2603958-2603977 Msa0230400:intron 55.0%
AATGGAGCTGCCTGGGCTAT+TGG + chr2_2:2604374-2604393 Msa0230400:CDS 55.0%
AGCAAGGACACCAATAGCCC+AGG - chr2_2:2604387-2604406 None:intergenic 55.0%
ACCTTGCAATTTCGGGGGGG+GGG - chr2_2:2601246-2601265 None:intergenic 60.0%
GGATCGACGGACACTTGTGG+CGG + chr2_2:2603663-2603682 Msa0230400:intron 60.0%
TCTCTGGCAATGGAGCTGCC+TGG + chr2_2:2604366-2604385 Msa0230400:CDS 60.0%
CTCTGGCAATGGAGCTGCCT+GGG + chr2_2:2604367-2604386 Msa0230400:CDS 60.0%
!! TATGCCCCACGGGCTAGGCT+AGG + chr2_2:2600651-2600670 Msa0230400:intron 65.0%
GAGTCCTAGCCTAGCCCGTG+GGG - chr2_2:2600658-2600677 None:intergenic 65.0%
GGAGTCCTAGCCTAGCCCGT+GGG - chr2_2:2600659-2600678 None:intergenic 65.0%
TGGAGTCCTAGCCTAGCCCG+TGG - chr2_2:2600660-2600679 None:intergenic 65.0%
TTGCAATTTCGGGGGGGGGG+GGG - chr2_2:2601243-2601262 None:intergenic 65.0%
CTTGCAATTTCGGGGGGGGG+GGG - chr2_2:2601244-2601263 None:intergenic 65.0%
CCTTGCAATTTCGGGGGGGG+GGG - chr2_2:2601245-2601264 None:intergenic 65.0%
TGCAATTTCGGGGGGGGGGG+GGG - chr2_2:2601242-2601261 None:intergenic 70.0%
CCCCCCCCCCCGAAATTGCA+AGG + chr2_2:2601242-2601261 Msa0230400:intron 70.0%
AATTTCGGGGGGGGGGGGGG+GGG - chr2_2:2601239-2601258 None:intergenic 75.0%
CAATTTCGGGGGGGGGGGGG+GGG - chr2_2:2601240-2601259 None:intergenic 75.0%
GCAATTTCGGGGGGGGGGGG+GGG - chr2_2:2601241-2601260 None:intergenic 75.0%
! ATTTCGGGGGGGGGGGGGGG+GGG - chr2_2:2601238-2601257 None:intergenic 80.0%
! TTTCGGGGGGGGGGGGGGGG+GGG - chr2_2:2601237-2601256 None:intergenic 85.0%
! TTCGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601236-2601255 None:intergenic 90.0%
! TCGGGGGGGGGGGGGGGGGG+GGG - chr2_2:2601235-2601254 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 2599233 2604900 2599233 ID=Msa0230400;Name=Msa0230400
chr2_2 mRNA 2599233 2604900 2599233 ID=Msa0230400-mRNA-1;Parent=Msa0230400;Name=Msa0230400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=362|1|1|1|1|1|2|332|189
chr2_2 exon 2599233 2599824 2599233 ID=Msa0230400-mRNA-1:exon:870;Parent=Msa0230400-mRNA-1
chr2_2 exon 2604229 2604900 2604229 ID=Msa0230400-mRNA-1:exon:871;Parent=Msa0230400-mRNA-1
chr2_2 five_prime_UTR 2599233 2599594 2599233 ID=Msa0230400-mRNA-1:five_prime_utr;Parent=Msa0230400-mRNA-1
chr2_2 CDS 2599595 2599824 2599595 ID=Msa0230400-mRNA-1:cds;Parent=Msa0230400-mRNA-1
chr2_2 CDS 2604229 2604568 2604229 ID=Msa0230400-mRNA-1:cds;Parent=Msa0230400-mRNA-1
chr2_2 three_prime_UTR 2604569 2604900 2604569 ID=Msa0230400-mRNA-1:three_prime_utr;Parent=Msa0230400-mRNA-1
Gene Sequence

>Msa0230400

ATGGAGGTTCAAAGTAGTAAAGAGTTGAAGGAAATTGTGGTGGTAAAGTCTTCACTAGAAGGAACTTGTAGTTTGGTTCTAAGGCTTTGTGCCTTGGTTCTAACACTTACGGCTGCTATAGTACTTGTTGCAGATAAACAAACCACAGTTGTTCCTGTTAAGATTTCAGATTCTTTACCACCTTTGGATGTTCCTGTTACTGCTAAGTGGCAATACATGTCTGCCTATGTGTATTTTGTGGTGGCAAATGTTATAGCATTTGCATATGCAACCTTGTCTTTCATTATTGCTCTTGCAAATGGGCATAAAAGCAAATGGTTAGTGACATTGGTGACTCTACTTGACGCAATAATGGTAGCTTTGCTCTTCTCTGGCAATGGAGCTGCCTGGGCTATTGGTGTCCTTGCTGAGAAAGGAAACTCACATGTGCTATGGAACAAAGTGTGTCATGTCTTTGACAAATTTTGCAACCAAGCTGCTGCTGCATGTTTGATTTCACTTCTTGGATCAGTATTTTTCCTCTCTCTTGTGATGCTTCCTGCTTTGAGACTTCATCGAAGAAGAACCTAG

Protein sequence

>Msa0230400

MEVQSSKELKEIVVVKSSLEGTCSLVLRLCALVLTLTAAIVLVADKQTTVVPVKISDSLPPLDVPVTAKWQYMSAYVYFVVANVIAFAYATLSFIIALANGHKSKWLVTLVTLLDAIMVALLFSGNGAAWAIGVLAEKGNSHVLWNKVCHVFDKFCNQAAAACLISLLGSVFFLSLVMLPALRLHRRRT*