Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137950 | XP_003621548.1 | 86.005 | 443 | 32 | 6 | 1 | 434 | 1 | 422 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137950 | Q2HSE9 | 86.005 | 443 | 32 | 6 | 1 | 434 | 1 | 422 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0207180 | Msa1137950 | 0.804274 | 2.336698e-49 | -8.615850e-47 |
| Msa1009670 | Msa1137950 | 0.885379 | 8.554758e-72 | -8.615850e-47 |
| Msa1050920 | Msa1137950 | 0.866079 | 3.704925e-65 | -8.615850e-47 |
| Msa0315480 | Msa1137950 | 0.806874 | 6.654229e-50 | -8.615850e-47 |
| Msa0487560 | Msa1137950 | 0.802629 | 5.123747e-49 | -8.615850e-47 |
| Msa0487620 | Msa1137950 | 0.806097 | 9.703910e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137950 | MtrunA17_Chr7g0220261 | 84.021 | 388 | 35 | 5 | 53 | 434 | 10 | 376 | 2.57e-152 | 438 |
| Msa1137950 | MtrunA17_Chr6g0455531 | 60.366 | 164 | 60 | 3 | 19 | 179 | 28 | 189 | 1.08e-49 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137950 | AT5G15780.1 | 58.642 | 162 | 60 | 6 | 3 | 158 | 10 | 170 | 2.29e-45 | 162 |
Find 120 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTTGTAATGGATTATT+AGG | 0.139809 | 7_4:+7007680 | None:intergenic |
| GGTGGTTGTAATGGATTATT+AGG | 0.139809 | 7_4:+7008040 | None:intergenic |
| GGTGGCTGAAATGGATTATT+AGG | 0.210524 | 7_4:+7007602 | None:intergenic |
| GGTGGTTGTGATGGATTATT+AGG | 0.215491 | 7_4:+7007917 | None:intergenic |
| AATGGATTATTAGGAATTAA+TGG | 0.244340 | 7_4:+7007980 | None:intergenic |
| ATGGGAAATCATTTCATTTC+AGG | 0.252182 | 7_4:-7009226 | Msa1137950:intron |
| TTTACTTGTTTCTTGAATCT+TGG | 0.256375 | 7_4:+7008640 | None:intergenic |
| CAAGGAACCAAGACATTCTA+AGG | 0.262607 | 7_4:+7009377 | None:intergenic |
| GGGACTAATGGTGGTGGATT+AGG | 0.268729 | 7_4:+7007938 | None:intergenic |
| GGTGGTTGTAATGGATTATT+AGG | 0.271477 | 7_4:+7007971 | None:intergenic |
| AATATTGGTGTAAGAATTTC+AGG | 0.284581 | 7_4:+7008229 | None:intergenic |
| TTAGGAATTGTTGGTGTACT+TGG | 0.298601 | 7_4:+7007659 | None:intergenic |
| GTTGGAGTTGGTGGTTGAAA+TGG | 0.312145 | 7_4:+7007635 | None:intergenic |
| AGAGGAATTGTTGGATGAAC+TGG | 0.317845 | 7_4:+7007872 | None:intergenic |
| CATAGATTTGGTTGTTTAAG+TGG | 0.335597 | 7_4:+7008412 | None:intergenic |
| ATTGTTGGATGAACTGGATT+AGG | 0.336495 | 7_4:+7007878 | None:intergenic |
| GACAATTCTGGTGGCAATAT+TGG | 0.339985 | 7_4:+7008214 | None:intergenic |
| TTGGAGTTGGTGGTTGAAAT+GGG | 0.340519 | 7_4:+7007636 | None:intergenic |
| TGGATTAGGAGGAAGGTTAA+AGG | 0.341986 | 7_4:+7007724 | None:intergenic |
| ACAATATCTTATATACTATA+TGG | 0.349238 | 7_4:+7009422 | None:intergenic |
| GGACTAATGGTGGTGGATTA+GGG | 0.370117 | 7_4:+7007939 | None:intergenic |
| CCTGATGGAGGTGGCTGAAA+TGG | 0.373008 | 7_4:+7007593 | None:intergenic |
| GGGATTAGTGGTGACAATTC+TGG | 0.374287 | 7_4:+7008202 | None:intergenic |
| GATATTGTAGACCATTTGTA+AGG | 0.374331 | 7_4:-7009407 | Msa1137950:five_prime_UTR |
| CTGTTTCTGATTGTAACATT+TGG | 0.391776 | 7_4:-7009349 | Msa1137950:CDS |
| GGTGTACTTGGTGGTTGTAA+TGG | 0.395161 | 7_4:+7007671 | None:intergenic |
| TAAAGATAAAGAGGGATCAT+AGG | 0.395600 | 7_4:-7009454 | None:intergenic |
| ACTAATGGTGTTGGAGTTGG+TGG | 0.405016 | 7_4:+7007626 | None:intergenic |
| AATGGATTATTAGGGACTAA+TGG | 0.406439 | 7_4:+7007689 | None:intergenic |
| AATGGATTATTAGGGACTAA+TGG | 0.406439 | 7_4:+7008049 | None:intergenic |
| GTGGTTGTAATGGATTATTA+GGG | 0.406491 | 7_4:+7007681 | None:intergenic |
| GTGGTTGTAATGGATTATTA+GGG | 0.406491 | 7_4:+7008041 | None:intergenic |
| GGGTTTGGATCTTGAAGTGG+GGG | 0.411587 | 7_4:+7008295 | None:intergenic |
| ATTAATGGTGGTGGTTGAAA+TGG | 0.423643 | 7_4:+7007995 | None:intergenic |
| GTGGTTGTGATGGATTATTA+GGG | 0.425540 | 7_4:+7007918 | None:intergenic |
| TTAGGAATAGTTGGTGTACT+TGG | 0.427639 | 7_4:+7008019 | None:intergenic |
| GTCATTCCACTAGGGATTAG+TGG | 0.431829 | 7_4:+7008190 | None:intergenic |
| GGGGTTTGGATCTTGAAGTG+GGG | 0.440503 | 7_4:+7008294 | None:intergenic |
| GAGGAAGGTTAAAGGAATCA+AGG | 0.440757 | 7_4:+7007732 | None:intergenic |
| CCTCTTTCTGCTGTTGTGGT+TGG | 0.441706 | 7_4:-7009289 | Msa1137950:CDS |
| ACATGTTTGCTCACTGAGAA+TGG | 0.442266 | 7_4:+7008583 | None:intergenic |
| GGTGTACTTGGTGGTTGTAA+TGG | 0.446794 | 7_4:+7008031 | None:intergenic |
| GCTGAGGCTATAGAACAAAA+TGG | 0.449700 | 7_4:+7008514 | None:intergenic |
| ACTAATGTTGGTGGTTGTAA+TGG | 0.452664 | 7_4:+7007962 | None:intergenic |
| ATTTCAGGTGCTAAAGGAAC+TGG | 0.456654 | 7_4:+7008244 | None:intergenic |
| AATGGATTATTAGGGACTAA+TGG | 0.457185 | 7_4:+7007611 | None:intergenic |
| GGTGGTGGTTGAAATGGATT+AGG | 0.459525 | 7_4:+7008001 | None:intergenic |
| AAGGTTTGTCCCCTTACAAA+TGG | 0.460381 | 7_4:+7009396 | None:intergenic |
| GATGGATTATTAGGGACTAA+TGG | 0.461210 | 7_4:+7007926 | None:intergenic |
| GGAATTGTTGGTGTACTTGG+TGG | 0.463583 | 7_4:+7007662 | None:intergenic |
| GGGACTAGTGGTGACAATAT+TGG | 0.463726 | 7_4:+7007830 | None:intergenic |
| GGTGTACTTGGTGGTTGTGA+TGG | 0.464461 | 7_4:+7007908 | None:intergenic |
| TGAAATGGGTTAGGAATTGT+TGG | 0.469104 | 7_4:+7007650 | None:intergenic |
| TGATGTAATAGAGGAATTGT+TGG | 0.472559 | 7_4:+7007863 | None:intergenic |
| GGGACTAATGGTGTTGGAGT+TGG | 0.475306 | 7_4:+7007623 | None:intergenic |
| GAAGCCTCTTTCTGCTGTTG+TGG | 0.476820 | 7_4:-7009293 | Msa1137950:CDS |
| GTTGGTGGTTGAAATGGGTT+AGG | 0.478394 | 7_4:+7007641 | None:intergenic |
| TGAAATGGATTAGGAATAGT+TGG | 0.478986 | 7_4:+7008010 | None:intergenic |
| GTGGCTGAAATGGATTATTA+GGG | 0.480817 | 7_4:+7007603 | None:intergenic |
| GTAAGAATTTCAGGTGCTAA+AGG | 0.488289 | 7_4:+7008238 | None:intergenic |
| CCATTTCAGCCACCTCCATC+AGG | 0.494064 | 7_4:-7007593 | Msa1137950:CDS |
| GGAAGAATTTGATGTAATAG+AGG | 0.494824 | 7_4:+7007854 | None:intergenic |
| TTATTAGGGACTAATGGTGT+TGG | 0.497525 | 7_4:+7007617 | None:intergenic |
| GGACTACACATATTCTCAGC+AGG | 0.499641 | 7_4:-7008451 | Msa1137950:CDS |
| TTTCAACAGGATTTCTCCAT+GGG | 0.503608 | 7_4:-7009244 | Msa1137950:CDS |
| AAACCTGGTACCGACGGAAA+AGG | 0.517768 | 7_4:+7007554 | None:intergenic |
| GGTGGATTAGGGACTAATGT+TGG | 0.520712 | 7_4:+7007950 | None:intergenic |
| TTGGAACTAGCCTTTCCACT+AGG | 0.522977 | 7_4:+7007809 | None:intergenic |
| GGACAAACCTTAGAATGTCT+TGG | 0.523095 | 7_4:-7009384 | Msa1137950:exon |
| GGATTAGGGACTAATGTTGG+TGG | 0.526498 | 7_4:+7007953 | None:intergenic |
| GAGGAATGTGAAAAGTATCA+AGG | 0.529046 | 7_4:+7008092 | None:intergenic |
| GGAAAGGAAGAACACCACTA+GGG | 0.536488 | 7_4:+7008272 | None:intergenic |
| TCTTCATTAGTCATTCCACT+AGG | 0.540107 | 7_4:+7008181 | None:intergenic |
| TGCTCACTGAGAATGGAAGT+TGG | 0.540570 | 7_4:+7008590 | None:intergenic |
| CAATCAGAAACAGTATTACA+AGG | 0.543756 | 7_4:+7009359 | None:intergenic |
| AAACATGTAAAGAGAATCAA+AGG | 0.549651 | 7_4:-7008568 | Msa1137950:CDS |
| TTATTAGGGACTAATGGTGG+TGG | 0.550341 | 7_4:+7007932 | None:intergenic |
| AAAGGAACTGGTGGGAGGAA+AGG | 0.551997 | 7_4:+7008256 | None:intergenic |
| GGAATAGTTGGTGTACTTGG+TGG | 0.552196 | 7_4:+7008022 | None:intergenic |
| TTAGGAACAAGTGGTGTACT+TGG | 0.552344 | 7_4:+7007896 | None:intergenic |
| TTATTAGGAATTAATGGTGG+TGG | 0.553954 | 7_4:+7007986 | None:intergenic |
| TGAAATGAAATGATTTCCCA+TGG | 0.558509 | 7_4:+7009228 | None:intergenic |
| CCAACCACAACAGCAGAAAG+AGG | 0.559072 | 7_4:+7009289 | None:intergenic |
| TGGAACTAGCCTTTCCACTA+GGG | 0.560670 | 7_4:+7007810 | None:intergenic |
| CACCTAAAATCAAGAAAACA+AGG | 0.564101 | 7_4:-7008472 | Msa1137950:CDS |
| TTATTAGGGACTAATGGTGG+TGG | 0.568223 | 7_4:+7007695 | None:intergenic |
| CTTCATTAGTCATTCCACTA+GGG | 0.568615 | 7_4:+7008182 | None:intergenic |
| GTCAATATTAAAGATAAAGA+GGG | 0.577065 | 7_4:-7009462 | None:intergenic |
| ATATTGTAGACCATTTGTAA+GGG | 0.580587 | 7_4:-7009406 | Msa1137950:five_prime_UTR |
| TTATTAGGGACTAATGGTGG+TGG | 0.585262 | 7_4:+7008055 | None:intergenic |
| TCAGGTGCTAAAGGAACTGG+TGG | 0.587525 | 7_4:+7008247 | None:intergenic |
| TGATGAAGATGAGGCTGCTG+AGG | 0.589656 | 7_4:+7008498 | None:intergenic |
| GCCTTTCCACTAGGGACTAG+TGG | 0.590117 | 7_4:+7007818 | None:intergenic |
| TATTAGGGACTAATGGTGGT+GGG | 0.590783 | 7_4:+7008056 | None:intergenic |
| ACCACTAGTCCCTAGTGGAA+AGG | 0.599084 | 7_4:-7007819 | Msa1137950:CDS |
| AGGAAAGGAAGAACACCACT+AGG | 0.607599 | 7_4:+7008271 | None:intergenic |
| GAAAGGAAGAACACCACTAG+GGG | 0.611858 | 7_4:+7008273 | None:intergenic |
| ACTAGTGGTGACAATATTGG+TGG | 0.614134 | 7_4:+7007833 | None:intergenic |
| GGACTTAAACCTGGTACCGA+CGG | 0.615702 | 7_4:+7007548 | None:intergenic |
| TATTGTAGACCATTTGTAAG+GGG | 0.616913 | 7_4:-7009405 | Msa1137950:five_prime_UTR |
| GACTACACATATTCTCAGCA+GGG | 0.621333 | 7_4:-7008450 | Msa1137950:CDS |
| TCAGTTGAAGTAGAATGCGA+TGG | 0.623765 | 7_4:-7008679 | Msa1137950:CDS |
| GGATTATTAGGGACTAATGG+TGG | 0.630974 | 7_4:+7007692 | None:intergenic |
| GGATTATTAGGGACTAATGG+TGG | 0.630974 | 7_4:+7008052 | None:intergenic |
| GGTGATGATCCTGATGGAGG+TGG | 0.635840 | 7_4:+7007584 | None:intergenic |
| GGATTATTAGGAATTAATGG+TGG | 0.636144 | 7_4:+7007983 | None:intergenic |
| GGATTATTAGGGACTAATGG+TGG | 0.639754 | 7_4:+7007929 | None:intergenic |
| GGAACAAGTGGTGTACTTGG+TGG | 0.654056 | 7_4:+7007899 | None:intergenic |
| TAGGTGAAGTGATGAAGATG+AGG | 0.654303 | 7_4:+7008489 | None:intergenic |
| TTGTCACCACTAATCCCTAG+TGG | 0.656373 | 7_4:-7008196 | Msa1137950:CDS |
| ACCGACGGAAAAGGAAACAA+TGG | 0.656858 | 7_4:+7007563 | None:intergenic |
| TTGTCACCACTAGTCCCTAG+TGG | 0.661560 | 7_4:-7007824 | Msa1137950:CDS |
| AAGGAAGAACACCACTAGGG+GGG | 0.663476 | 7_4:+7008275 | None:intergenic |
| GTGCTAAAGGAACTGGTGGG+AGG | 0.667320 | 7_4:+7008251 | None:intergenic |
| AACAATGGTGATGATCCTGA+TGG | 0.671828 | 7_4:+7007578 | None:intergenic |
| TGAACTGGATTAGGAACAAG+TGG | 0.672752 | 7_4:+7007887 | None:intergenic |
| AAAGGAAGAACACCACTAGG+GGG | 0.676816 | 7_4:+7008274 | None:intergenic |
| ATTAGTGGTGACAATTCTGG+TGG | 0.683000 | 7_4:+7008205 | None:intergenic |
| CAGGTGCTAAAGGAACTGGT+GGG | 0.724952 | 7_4:+7008248 | None:intergenic |
| AATGGTGATGATCCTGATGG+AGG | 0.729850 | 7_4:+7007581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATATCTTATATACTATA+TGG | + | chr7_4:7007587-7007606 | None:intergenic | 15.0% |
| !! | AAAATATTGTTTGAAAATGT+CGG | + | chr7_4:7008038-7008057 | None:intergenic | 15.0% |
| !!! | TTTTGAATTTTTTGTTGATT+TGG | + | chr7_4:7009219-7009238 | None:intergenic | 15.0% |
| !! | ACAATATCTTATATACTATA+TGG | + | chr7_4:7007587-7007606 | None:intergenic | 15.0% |
| !! | AAAATATTGTTTGAAAATGT+CGG | + | chr7_4:7008038-7008057 | None:intergenic | 15.0% |
| !!! | TTTTGAATTTTTTGTTGATT+TGG | + | chr7_4:7009219-7009238 | None:intergenic | 15.0% |
| !!! | AATTGTCTTATTTTTTTGCA+AGG | - | chr7_4:7007821-7007840 | Msa1137950:CDS | 20.0% |
| !!! | GAAAGCTATGTTTTAAAAAT+TGG | + | chr7_4:7008225-7008244 | None:intergenic | 20.0% |
| !!! | CACTCAAGAATATTTTTTAT+AGG | + | chr7_4:7008299-7008318 | None:intergenic | 20.0% |
| !!! | AAAAAAGGTTATTGATTCTT+TGG | - | chr7_4:7008647-7008666 | Msa1137950:CDS | 20.0% |
| !!! | AATGGATTATTAGGAATTAA+TGG | + | chr7_4:7009029-7009048 | None:intergenic | 20.0% |
| !!! | AATTGTCTTATTTTTTTGCA+AGG | - | chr7_4:7007821-7007840 | Msa1137950:CDS | 20.0% |
| !!! | GAAAGCTATGTTTTAAAAAT+TGG | + | chr7_4:7008225-7008244 | None:intergenic | 20.0% |
| !!! | CACTCAAGAATATTTTTTAT+AGG | + | chr7_4:7008299-7008318 | None:intergenic | 20.0% |
| !!! | AAAAAAGGTTATTGATTCTT+TGG | - | chr7_4:7008647-7008666 | Msa1137950:CDS | 20.0% |
| !!! | AATGGATTATTAGGAATTAA+TGG | + | chr7_4:7009029-7009048 | None:intergenic | 20.0% |
| ! | ATATTGTAGACCATTTGTAA+GGG | - | chr7_4:7007600-7007619 | Msa1137950:CDS | 25.0% |
| ! | ACAATTAAGCAGTTAAGAAA+TGG | + | chr7_4:7007807-7007826 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACCCTATTGAAC+CGG | - | chr7_4:7008054-7008073 | Msa1137950:CDS | 25.0% |
| ! | AATTAGATTGCAATGTAATC+GGG | + | chr7_4:7008122-7008141 | None:intergenic | 25.0% |
| ! | CAATTAGATTGCAATGTAAT+CGG | + | chr7_4:7008123-7008142 | None:intergenic | 25.0% |
| ! | TTAAACTTACAGATGAACTA+CGG | + | chr7_4:7008148-7008167 | None:intergenic | 25.0% |
| !!! | CTATGTTTTAAAAATTGGAG+CGG | + | chr7_4:7008220-7008239 | None:intergenic | 25.0% |
| ! | TAAAAAATATTCTTGAGTGC+AGG | - | chr7_4:7008300-7008319 | Msa1137950:CDS | 25.0% |
| !! | TTTACTTGTTTCTTGAATCT+TGG | + | chr7_4:7008369-7008388 | None:intergenic | 25.0% |
| ! | CAAGTAAAAACAAATGAACA+TGG | - | chr7_4:7008381-7008400 | Msa1137950:CDS | 25.0% |
| ! | AAACATGTAAAGAGAATCAA+AGG | - | chr7_4:7008438-7008457 | Msa1137950:CDS | 25.0% |
| ! | TGTTGATCAAAACACAAAAA+AGG | - | chr7_4:7008632-7008651 | Msa1137950:CDS | 25.0% |
| ! | AATATTGGTGTAAGAATTTC+AGG | + | chr7_4:7008780-7008799 | None:intergenic | 25.0% |
| ! | ATATTGTAGACCATTTGTAA+GGG | - | chr7_4:7007600-7007619 | Msa1137950:CDS | 25.0% |
| ! | ACAATTAAGCAGTTAAGAAA+TGG | + | chr7_4:7007807-7007826 | None:intergenic | 25.0% |
| !!! | TTTTAAAAACCCTATTGAAC+CGG | - | chr7_4:7008054-7008073 | Msa1137950:CDS | 25.0% |
| ! | AATTAGATTGCAATGTAATC+GGG | + | chr7_4:7008122-7008141 | None:intergenic | 25.0% |
| ! | CAATTAGATTGCAATGTAAT+CGG | + | chr7_4:7008123-7008142 | None:intergenic | 25.0% |
| ! | TTAAACTTACAGATGAACTA+CGG | + | chr7_4:7008148-7008167 | None:intergenic | 25.0% |
| !!! | CTATGTTTTAAAAATTGGAG+CGG | + | chr7_4:7008220-7008239 | None:intergenic | 25.0% |
| ! | TAAAAAATATTCTTGAGTGC+AGG | - | chr7_4:7008300-7008319 | Msa1137950:CDS | 25.0% |
| !! | TTTACTTGTTTCTTGAATCT+TGG | + | chr7_4:7008369-7008388 | None:intergenic | 25.0% |
| ! | CAAGTAAAAACAAATGAACA+TGG | - | chr7_4:7008381-7008400 | Msa1137950:CDS | 25.0% |
| ! | AAACATGTAAAGAGAATCAA+AGG | - | chr7_4:7008438-7008457 | Msa1137950:CDS | 25.0% |
| ! | TGTTGATCAAAACACAAAAA+AGG | - | chr7_4:7008632-7008651 | Msa1137950:CDS | 25.0% |
| ! | AATATTGGTGTAAGAATTTC+AGG | + | chr7_4:7008780-7008799 | None:intergenic | 25.0% |
| GATATTGTAGACCATTTGTA+AGG | - | chr7_4:7007599-7007618 | Msa1137950:CDS | 30.0% | |
| TATTGTAGACCATTTGTAAG+GGG | - | chr7_4:7007601-7007620 | Msa1137950:CDS | 30.0% | |
| CAATCAGAAACAGTATTACA+AGG | + | chr7_4:7007650-7007669 | None:intergenic | 30.0% | |
| !! | CTGTTTCTGATTGTAACATT+TGG | - | chr7_4:7007657-7007676 | Msa1137950:CDS | 30.0% |
| ! | AACATTTGGTACATTTTCTG+AGG | - | chr7_4:7007671-7007690 | Msa1137950:CDS | 30.0% |
| TGAAATGAAATGATTTCCCA+TGG | + | chr7_4:7007781-7007800 | None:intergenic | 30.0% | |
| ATGGGAAATCATTTCATTTC+AGG | - | chr7_4:7007780-7007799 | Msa1137950:CDS | 30.0% | |
| TTTCAATGTCATGTACTACA+TGG | + | chr7_4:7007900-7007919 | None:intergenic | 30.0% | |
| ! | CATGACATTGAAAGTGTATT+TGG | - | chr7_4:7007907-7007926 | Msa1137950:CDS | 30.0% |
| ! | CACGATTTAATTGGTTCAAT+TGG | + | chr7_4:7008171-7008190 | None:intergenic | 30.0% |
| CACCTAAAATCAAGAAAACA+AGG | - | chr7_4:7008534-7008553 | Msa1137950:CDS | 30.0% | |
| !!! | GTCCTTGTTTTCTTGATTTT+AGG | + | chr7_4:7008539-7008558 | None:intergenic | 30.0% |
| ! | CATAGATTTGGTTGTTTAAG+TGG | + | chr7_4:7008597-7008616 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGTTACATAGATT+TGG | + | chr7_4:7008609-7008628 | None:intergenic | 30.0% |
| !! | TTTGATCAACACTTGGTTTT+TGG | + | chr7_4:7008623-7008642 | None:intergenic | 30.0% |
| !!! | TTTGTGTTTTGATCAACACT+TGG | + | chr7_4:7008630-7008649 | None:intergenic | 30.0% |
| !! | AAAGAAGGATCAATTTTTGG+AGG | + | chr7_4:7008687-7008706 | None:intergenic | 30.0% |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| !! | GTGGTTGTAATGGATTATTA+GGG | + | chr7_4:7008968-7008987 | None:intergenic | 30.0% |
| !! | TGAAATGGATTAGGAATAGT+TGG | + | chr7_4:7008999-7009018 | None:intergenic | 30.0% |
| TTATTAGGAATTAATGGTGG+TGG | + | chr7_4:7009023-7009042 | None:intergenic | 30.0% | |
| GGATTATTAGGAATTAATGG+TGG | + | chr7_4:7009026-7009045 | None:intergenic | 30.0% | |
| TGATGTAATAGAGGAATTGT+TGG | + | chr7_4:7009146-7009165 | None:intergenic | 30.0% | |
| GGAAGAATTTGATGTAATAG+AGG | + | chr7_4:7009155-7009174 | None:intergenic | 30.0% | |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| !! | GTGGTTGTAATGGATTATTA+GGG | + | chr7_4:7008968-7008987 | None:intergenic | 30.0% |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| GATATTGTAGACCATTTGTA+AGG | - | chr7_4:7007599-7007618 | Msa1137950:CDS | 30.0% | |
| TATTGTAGACCATTTGTAAG+GGG | - | chr7_4:7007601-7007620 | Msa1137950:CDS | 30.0% | |
| CAATCAGAAACAGTATTACA+AGG | + | chr7_4:7007650-7007669 | None:intergenic | 30.0% | |
| !! | CTGTTTCTGATTGTAACATT+TGG | - | chr7_4:7007657-7007676 | Msa1137950:CDS | 30.0% |
| ! | AACATTTGGTACATTTTCTG+AGG | - | chr7_4:7007671-7007690 | Msa1137950:CDS | 30.0% |
| TGAAATGAAATGATTTCCCA+TGG | + | chr7_4:7007781-7007800 | None:intergenic | 30.0% | |
| ATGGGAAATCATTTCATTTC+AGG | - | chr7_4:7007780-7007799 | Msa1137950:CDS | 30.0% | |
| TTTCAATGTCATGTACTACA+TGG | + | chr7_4:7007900-7007919 | None:intergenic | 30.0% | |
| ! | CATGACATTGAAAGTGTATT+TGG | - | chr7_4:7007907-7007926 | Msa1137950:CDS | 30.0% |
| ! | CACGATTTAATTGGTTCAAT+TGG | + | chr7_4:7008171-7008190 | None:intergenic | 30.0% |
| CACCTAAAATCAAGAAAACA+AGG | - | chr7_4:7008534-7008553 | Msa1137950:CDS | 30.0% | |
| !!! | GTCCTTGTTTTCTTGATTTT+AGG | + | chr7_4:7008539-7008558 | None:intergenic | 30.0% |
| ! | CATAGATTTGGTTGTTTAAG+TGG | + | chr7_4:7008597-7008616 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGTTACATAGATT+TGG | + | chr7_4:7008609-7008628 | None:intergenic | 30.0% |
| !! | TTTGATCAACACTTGGTTTT+TGG | + | chr7_4:7008623-7008642 | None:intergenic | 30.0% |
| !!! | TTTGTGTTTTGATCAACACT+TGG | + | chr7_4:7008630-7008649 | None:intergenic | 30.0% |
| !! | AAAGAAGGATCAATTTTTGG+AGG | + | chr7_4:7008687-7008706 | None:intergenic | 30.0% |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| !! | GTGGTTGTAATGGATTATTA+GGG | + | chr7_4:7008968-7008987 | None:intergenic | 30.0% |
| !! | TGAAATGGATTAGGAATAGT+TGG | + | chr7_4:7008999-7009018 | None:intergenic | 30.0% |
| TTATTAGGAATTAATGGTGG+TGG | + | chr7_4:7009023-7009042 | None:intergenic | 30.0% | |
| GGATTATTAGGAATTAATGG+TGG | + | chr7_4:7009026-7009045 | None:intergenic | 30.0% | |
| TGATGTAATAGAGGAATTGT+TGG | + | chr7_4:7009146-7009165 | None:intergenic | 30.0% | |
| GGAAGAATTTGATGTAATAG+AGG | + | chr7_4:7009155-7009174 | None:intergenic | 30.0% | |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| !! | GTGGTTGTAATGGATTATTA+GGG | + | chr7_4:7008968-7008987 | None:intergenic | 30.0% |
| !! | AATGGATTATTAGGGACTAA+TGG | + | chr7_4:7008960-7008979 | None:intergenic | 30.0% |
| ! | TTGTGACACATGTTTTCAAC+AGG | - | chr7_4:7007749-7007768 | Msa1137950:CDS | 35.0% |
| ! | TTTTCAACAGGATTTCTCCA+TGG | - | chr7_4:7007761-7007780 | Msa1137950:CDS | 35.0% |
| TTTCAACAGGATTTCTCCAT+GGG | - | chr7_4:7007762-7007781 | Msa1137950:CDS | 35.0% | |
| ! | GGGAAAGAAGGATCAATTTT+TGG | + | chr7_4:7008690-7008709 | None:intergenic | 35.0% |
| ! | GTAAGAATTTCAGGTGCTAA+AGG | + | chr7_4:7008771-7008790 | None:intergenic | 35.0% |
| CTTCATTAGTCATTCCACTA+GGG | + | chr7_4:7008827-7008846 | None:intergenic | 35.0% | |
| TCTTCATTAGTCATTCCACT+AGG | + | chr7_4:7008828-7008847 | None:intergenic | 35.0% | |
| !! | GAGGAATGTGAAAAGTATCA+AGG | + | chr7_4:7008917-7008936 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| ! | TTAGGAATAGTTGGTGTACT+TGG | + | chr7_4:7008990-7009009 | None:intergenic | 35.0% |
| !! | ATTAATGGTGGTGGTTGAAA+TGG | + | chr7_4:7009014-7009033 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| !! | ACTAATGTTGGTGGTTGTAA+TGG | + | chr7_4:7009047-7009066 | None:intergenic | 35.0% |
| !! | GATGGATTATTAGGGACTAA+TGG | + | chr7_4:7009083-7009102 | None:intergenic | 35.0% |
| !! | GTGGTTGTGATGGATTATTA+GGG | + | chr7_4:7009091-7009110 | None:intergenic | 35.0% |
| ATTGTTGGATGAACTGGATT+AGG | + | chr7_4:7009131-7009150 | None:intergenic | 35.0% | |
| !! | GAAAAAATGGATTAGGAGGA+AGG | + | chr7_4:7009292-7009311 | None:intergenic | 35.0% |
| !! | ACTAATGGTGGTGGAAAAAA+TGG | + | chr7_4:7009305-7009324 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| TTAGGAATTGTTGGTGTACT+TGG | + | chr7_4:7009350-7009369 | None:intergenic | 35.0% | |
| !! | TGAAATGGGTTAGGAATTGT+TGG | + | chr7_4:7009359-7009378 | None:intergenic | 35.0% |
| TTATTAGGGACTAATGGTGT+TGG | + | chr7_4:7009392-7009411 | None:intergenic | 35.0% | |
| !! | GTGGCTGAAATGGATTATTA+GGG | + | chr7_4:7009406-7009425 | None:intergenic | 35.0% |
| ! | TTGTGACACATGTTTTCAAC+AGG | - | chr7_4:7007749-7007768 | Msa1137950:CDS | 35.0% |
| ! | TTTTCAACAGGATTTCTCCA+TGG | - | chr7_4:7007761-7007780 | Msa1137950:CDS | 35.0% |
| TTTCAACAGGATTTCTCCAT+GGG | - | chr7_4:7007762-7007781 | Msa1137950:CDS | 35.0% | |
| ! | GGGAAAGAAGGATCAATTTT+TGG | + | chr7_4:7008690-7008709 | None:intergenic | 35.0% |
| ! | GTAAGAATTTCAGGTGCTAA+AGG | + | chr7_4:7008771-7008790 | None:intergenic | 35.0% |
| CTTCATTAGTCATTCCACTA+GGG | + | chr7_4:7008827-7008846 | None:intergenic | 35.0% | |
| TCTTCATTAGTCATTCCACT+AGG | + | chr7_4:7008828-7008847 | None:intergenic | 35.0% | |
| !! | GAGGAATGTGAAAAGTATCA+AGG | + | chr7_4:7008917-7008936 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| ! | TTAGGAATAGTTGGTGTACT+TGG | + | chr7_4:7008990-7009009 | None:intergenic | 35.0% |
| !! | ATTAATGGTGGTGGTTGAAA+TGG | + | chr7_4:7009014-7009033 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| !! | ACTAATGTTGGTGGTTGTAA+TGG | + | chr7_4:7009047-7009066 | None:intergenic | 35.0% |
| !! | GATGGATTATTAGGGACTAA+TGG | + | chr7_4:7009083-7009102 | None:intergenic | 35.0% |
| !! | GTGGTTGTGATGGATTATTA+GGG | + | chr7_4:7009091-7009110 | None:intergenic | 35.0% |
| ATTGTTGGATGAACTGGATT+AGG | + | chr7_4:7009131-7009150 | None:intergenic | 35.0% | |
| !! | GAAAAAATGGATTAGGAGGA+AGG | + | chr7_4:7009292-7009311 | None:intergenic | 35.0% |
| !! | ACTAATGGTGGTGGAAAAAA+TGG | + | chr7_4:7009305-7009324 | None:intergenic | 35.0% |
| !! | GGTGGTTGTAATGGATTATT+AGG | + | chr7_4:7008969-7008988 | None:intergenic | 35.0% |
| TTAGGAATTGTTGGTGTACT+TGG | + | chr7_4:7009350-7009369 | None:intergenic | 35.0% | |
| !! | TGAAATGGGTTAGGAATTGT+TGG | + | chr7_4:7009359-7009378 | None:intergenic | 35.0% |
| TTATTAGGGACTAATGGTGT+TGG | + | chr7_4:7009392-7009411 | None:intergenic | 35.0% | |
| !! | GTGGCTGAAATGGATTATTA+GGG | + | chr7_4:7009406-7009425 | None:intergenic | 35.0% |
| AAGGTTTGTCCCCTTACAAA+TGG | + | chr7_4:7007613-7007632 | None:intergenic | 40.0% | |
| GGACAAACCTTAGAATGTCT+TGG | - | chr7_4:7007622-7007641 | Msa1137950:CDS | 40.0% | |
| CAAGGAACCAAGACATTCTA+AGG | + | chr7_4:7007632-7007651 | None:intergenic | 40.0% | |
| GTAATCGGGATCAAATCAAC+AGG | + | chr7_4:7008108-7008127 | None:intergenic | 40.0% | |
| ACCAATTAAATCGTGATCCG+AGG | - | chr7_4:7008176-7008195 | Msa1137950:CDS | 40.0% | |
| TCCTCGGATCACGATTTAAT+TGG | + | chr7_4:7008180-7008199 | None:intergenic | 40.0% | |
| TCAGTTGAAGTAGAATGCGA+TGG | - | chr7_4:7008327-7008346 | Msa1137950:CDS | 40.0% | |
| ACATGTTTGCTCACTGAGAA+TGG | + | chr7_4:7008426-7008445 | None:intergenic | 40.0% | |
| GCTGAGGCTATAGAACAAAA+TGG | + | chr7_4:7008495-7008514 | None:intergenic | 40.0% | |
| TAGGTGAAGTGATGAAGATG+AGG | + | chr7_4:7008520-7008539 | None:intergenic | 40.0% | |
| GACTACACATATTCTCAGCA+GGG | - | chr7_4:7008556-7008575 | Msa1137950:CDS | 40.0% | |
| ! | ATTTCAGGTGCTAAAGGAAC+TGG | + | chr7_4:7008765-7008784 | None:intergenic | 40.0% |
| GACAATTCTGGTGGCAATAT+TGG | + | chr7_4:7008795-7008814 | None:intergenic | 40.0% | |
| ATTAGTGGTGACAATTCTGG+TGG | + | chr7_4:7008804-7008823 | None:intergenic | 40.0% | |
| !! | ACTAATGGTGGTGGGAAAAA+TGG | + | chr7_4:7008945-7008964 | None:intergenic | 40.0% |
| TATTAGGGACTAATGGTGGT+GGG | + | chr7_4:7008953-7008972 | None:intergenic | 40.0% | |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| !! | GGTGGTTGTGATGGATTATT+AGG | + | chr7_4:7009092-7009111 | None:intergenic | 40.0% |
| TTAGGAACAAGTGGTGTACT+TGG | + | chr7_4:7009113-7009132 | None:intergenic | 40.0% | |
| ! | TGAACTGGATTAGGAACAAG+TGG | + | chr7_4:7009122-7009141 | None:intergenic | 40.0% |
| AGAGGAATTGTTGGATGAAC+TGG | + | chr7_4:7009137-7009156 | None:intergenic | 40.0% | |
| ACTAGTGGTGACAATATTGG+TGG | + | chr7_4:7009176-7009195 | None:intergenic | 40.0% | |
| GAGGAAGGTTAAAGGAATCA+AGG | + | chr7_4:7009277-7009296 | None:intergenic | 40.0% | |
| ! | TGGATTAGGAGGAAGGTTAA+AGG | + | chr7_4:7009285-7009304 | None:intergenic | 40.0% |
| !! | GGTGGAAAAAATGGATTAGG+AGG | + | chr7_4:7009296-7009315 | None:intergenic | 40.0% |
| !! | GGTGGTGGAAAAAATGGATT+AGG | + | chr7_4:7009299-7009318 | None:intergenic | 40.0% |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| !! | TTGGAGTTGGTGGTTGAAAT+GGG | + | chr7_4:7009373-7009392 | None:intergenic | 40.0% |
| !! | GGTGGCTGAAATGGATTATT+AGG | + | chr7_4:7009407-7009426 | None:intergenic | 40.0% |
| ! | AACAATGGTGATGATCCTGA+TGG | + | chr7_4:7009431-7009450 | None:intergenic | 40.0% |
| ! | ACCATTGTTTCCTTTTCCGT+CGG | - | chr7_4:7009442-7009461 | Msa1137950:five_prime_UTR | 40.0% |
| ! | TGTTCCTATGATCCCTCTTT+TGG | + | chr7_4:7007559-7007578 | None:intergenic | 40.0% |
| AAGGTTTGTCCCCTTACAAA+TGG | + | chr7_4:7007613-7007632 | None:intergenic | 40.0% | |
| GGACAAACCTTAGAATGTCT+TGG | - | chr7_4:7007622-7007641 | Msa1137950:CDS | 40.0% | |
| CAAGGAACCAAGACATTCTA+AGG | + | chr7_4:7007632-7007651 | None:intergenic | 40.0% | |
| GTAATCGGGATCAAATCAAC+AGG | + | chr7_4:7008108-7008127 | None:intergenic | 40.0% | |
| ACCAATTAAATCGTGATCCG+AGG | - | chr7_4:7008176-7008195 | Msa1137950:CDS | 40.0% | |
| TCCTCGGATCACGATTTAAT+TGG | + | chr7_4:7008180-7008199 | None:intergenic | 40.0% | |
| TCAGTTGAAGTAGAATGCGA+TGG | - | chr7_4:7008327-7008346 | Msa1137950:CDS | 40.0% | |
| ACATGTTTGCTCACTGAGAA+TGG | + | chr7_4:7008426-7008445 | None:intergenic | 40.0% | |
| GCTGAGGCTATAGAACAAAA+TGG | + | chr7_4:7008495-7008514 | None:intergenic | 40.0% | |
| TAGGTGAAGTGATGAAGATG+AGG | + | chr7_4:7008520-7008539 | None:intergenic | 40.0% | |
| GACTACACATATTCTCAGCA+GGG | - | chr7_4:7008556-7008575 | Msa1137950:CDS | 40.0% | |
| ! | ATTTCAGGTGCTAAAGGAAC+TGG | + | chr7_4:7008765-7008784 | None:intergenic | 40.0% |
| GACAATTCTGGTGGCAATAT+TGG | + | chr7_4:7008795-7008814 | None:intergenic | 40.0% | |
| ATTAGTGGTGACAATTCTGG+TGG | + | chr7_4:7008804-7008823 | None:intergenic | 40.0% | |
| !! | ACTAATGGTGGTGGGAAAAA+TGG | + | chr7_4:7008945-7008964 | None:intergenic | 40.0% |
| TATTAGGGACTAATGGTGGT+GGG | + | chr7_4:7008953-7008972 | None:intergenic | 40.0% | |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| !! | GGTGGTTGTGATGGATTATT+AGG | + | chr7_4:7009092-7009111 | None:intergenic | 40.0% |
| TTAGGAACAAGTGGTGTACT+TGG | + | chr7_4:7009113-7009132 | None:intergenic | 40.0% | |
| ! | TGAACTGGATTAGGAACAAG+TGG | + | chr7_4:7009122-7009141 | None:intergenic | 40.0% |
| AGAGGAATTGTTGGATGAAC+TGG | + | chr7_4:7009137-7009156 | None:intergenic | 40.0% | |
| ACTAGTGGTGACAATATTGG+TGG | + | chr7_4:7009176-7009195 | None:intergenic | 40.0% | |
| GAGGAAGGTTAAAGGAATCA+AGG | + | chr7_4:7009277-7009296 | None:intergenic | 40.0% | |
| ! | TGGATTAGGAGGAAGGTTAA+AGG | + | chr7_4:7009285-7009304 | None:intergenic | 40.0% |
| !! | GGTGGAAAAAATGGATTAGG+AGG | + | chr7_4:7009296-7009315 | None:intergenic | 40.0% |
| !! | GGTGGTGGAAAAAATGGATT+AGG | + | chr7_4:7009299-7009318 | None:intergenic | 40.0% |
| TTATTAGGGACTAATGGTGG+TGG | + | chr7_4:7008954-7008973 | None:intergenic | 40.0% | |
| GGATTATTAGGGACTAATGG+TGG | + | chr7_4:7008957-7008976 | None:intergenic | 40.0% | |
| !! | TTGGAGTTGGTGGTTGAAAT+GGG | + | chr7_4:7009373-7009392 | None:intergenic | 40.0% |
| !! | GGTGGCTGAAATGGATTATT+AGG | + | chr7_4:7009407-7009426 | None:intergenic | 40.0% |
| ! | AACAATGGTGATGATCCTGA+TGG | + | chr7_4:7009431-7009450 | None:intergenic | 40.0% |
| ! | ACCATTGTTTCCTTTTCCGT+CGG | - | chr7_4:7009442-7009461 | Msa1137950:five_prime_UTR | 40.0% |
| AGTGCATGACACATCAACAC+AGG | + | chr7_4:7007990-7008009 | None:intergenic | 45.0% | |
| AAAAACCCTATTGAACCGGC+CGG | - | chr7_4:7008058-7008077 | Msa1137950:CDS | 45.0% | |
| TAGCCAACTCTTGGTTCAAC+CGG | + | chr7_4:7008080-7008099 | None:intergenic | 45.0% | |
| GATCGAAGATGTGAGATCCT+CGG | + | chr7_4:7008196-7008215 | None:intergenic | 45.0% | |
| TGCTCACTGAGAATGGAAGT+TGG | + | chr7_4:7008419-7008438 | None:intergenic | 45.0% | |
| GGACTACACATATTCTCAGC+AGG | - | chr7_4:7008555-7008574 | Msa1137950:CDS | 45.0% | |
| AAAGGAAGAACACCACTAGG+GGG | + | chr7_4:7008735-7008754 | None:intergenic | 45.0% | |
| GAAAGGAAGAACACCACTAG+GGG | + | chr7_4:7008736-7008755 | None:intergenic | 45.0% | |
| GGAAAGGAAGAACACCACTA+GGG | + | chr7_4:7008737-7008756 | None:intergenic | 45.0% | |
| AGGAAAGGAAGAACACCACT+AGG | + | chr7_4:7008738-7008757 | None:intergenic | 45.0% | |
| ! | GGGATTAGTGGTGACAATTC+TGG | + | chr7_4:7008807-7008826 | None:intergenic | 45.0% |
| TTGTCACCACTAATCCCTAG+TGG | - | chr7_4:7008810-7008829 | Msa1137950:intron | 45.0% | |
| GTCATTCCACTAGGGATTAG+TGG | + | chr7_4:7008819-7008838 | None:intergenic | 45.0% | |
| !! | GGTGGGAAAAATGGATTAGG+AGG | + | chr7_4:7008936-7008955 | None:intergenic | 45.0% |
| !! | GGTGGTGGGAAAAATGGATT+AGG | + | chr7_4:7008939-7008958 | None:intergenic | 45.0% |
| ! | GGTGTACTTGGTGGTTGTAA+TGG | + | chr7_4:7008978-7008997 | None:intergenic | 45.0% |
| ! | GGAATAGTTGGTGTACTTGG+TGG | + | chr7_4:7008987-7009006 | None:intergenic | 45.0% |
| ! | GGTGGTGGTTGAAATGGATT+AGG | + | chr7_4:7009008-7009027 | None:intergenic | 45.0% |
| GGATTAGGGACTAATGTTGG+TGG | + | chr7_4:7009056-7009075 | None:intergenic | 45.0% | |
| !! | GGTGGATTAGGGACTAATGT+TGG | + | chr7_4:7009059-7009078 | None:intergenic | 45.0% |
| !! | GGACTAATGGTGGTGGATTA+GGG | + | chr7_4:7009070-7009089 | None:intergenic | 45.0% |
| ! | GGGACTAGTGGTGACAATAT+TGG | + | chr7_4:7009179-7009198 | None:intergenic | 45.0% |
| !! | TGGAACTAGCCTTTCCACTA+GGG | + | chr7_4:7009199-7009218 | None:intergenic | 45.0% |
| !! | TTGGAACTAGCCTTTCCACT+AGG | + | chr7_4:7009200-7009219 | None:intergenic | 45.0% |
| ! | GGTGTACTTGGTGGTTGTAA+TGG | + | chr7_4:7008978-7008997 | None:intergenic | 45.0% |
| GGAATTGTTGGTGTACTTGG+TGG | + | chr7_4:7009347-7009366 | None:intergenic | 45.0% | |
| !! | GTTGGTGGTTGAAATGGGTT+AGG | + | chr7_4:7009368-7009387 | None:intergenic | 45.0% |
| !! | GTTGGAGTTGGTGGTTGAAA+TGG | + | chr7_4:7009374-7009393 | None:intergenic | 45.0% |
| ! | ACTAATGGTGTTGGAGTTGG+TGG | + | chr7_4:7009383-7009402 | None:intergenic | 45.0% |
| ! | AATGGTGATGATCCTGATGG+AGG | + | chr7_4:7009428-7009447 | None:intergenic | 45.0% |
| ACCGACGGAAAAGGAAACAA+TGG | + | chr7_4:7009446-7009465 | None:intergenic | 45.0% | |
| AGTGCATGACACATCAACAC+AGG | + | chr7_4:7007990-7008009 | None:intergenic | 45.0% | |
| AAAAACCCTATTGAACCGGC+CGG | - | chr7_4:7008058-7008077 | Msa1137950:CDS | 45.0% | |
| TAGCCAACTCTTGGTTCAAC+CGG | + | chr7_4:7008080-7008099 | None:intergenic | 45.0% | |
| GATCGAAGATGTGAGATCCT+CGG | + | chr7_4:7008196-7008215 | None:intergenic | 45.0% | |
| TGCTCACTGAGAATGGAAGT+TGG | + | chr7_4:7008419-7008438 | None:intergenic | 45.0% | |
| GGACTACACATATTCTCAGC+AGG | - | chr7_4:7008555-7008574 | Msa1137950:CDS | 45.0% | |
| AAAGGAAGAACACCACTAGG+GGG | + | chr7_4:7008735-7008754 | None:intergenic | 45.0% | |
| GAAAGGAAGAACACCACTAG+GGG | + | chr7_4:7008736-7008755 | None:intergenic | 45.0% | |
| GGAAAGGAAGAACACCACTA+GGG | + | chr7_4:7008737-7008756 | None:intergenic | 45.0% | |
| AGGAAAGGAAGAACACCACT+AGG | + | chr7_4:7008738-7008757 | None:intergenic | 45.0% | |
| ! | GGGATTAGTGGTGACAATTC+TGG | + | chr7_4:7008807-7008826 | None:intergenic | 45.0% |
| TTGTCACCACTAATCCCTAG+TGG | - | chr7_4:7008810-7008829 | Msa1137950:intron | 45.0% | |
| GTCATTCCACTAGGGATTAG+TGG | + | chr7_4:7008819-7008838 | None:intergenic | 45.0% | |
| !! | GGTGGGAAAAATGGATTAGG+AGG | + | chr7_4:7008936-7008955 | None:intergenic | 45.0% |
| !! | GGTGGTGGGAAAAATGGATT+AGG | + | chr7_4:7008939-7008958 | None:intergenic | 45.0% |
| ! | GGTGTACTTGGTGGTTGTAA+TGG | + | chr7_4:7008978-7008997 | None:intergenic | 45.0% |
| ! | GGAATAGTTGGTGTACTTGG+TGG | + | chr7_4:7008987-7009006 | None:intergenic | 45.0% |
| ! | GGTGGTGGTTGAAATGGATT+AGG | + | chr7_4:7009008-7009027 | None:intergenic | 45.0% |
| GGATTAGGGACTAATGTTGG+TGG | + | chr7_4:7009056-7009075 | None:intergenic | 45.0% | |
| !! | GGTGGATTAGGGACTAATGT+TGG | + | chr7_4:7009059-7009078 | None:intergenic | 45.0% |
| !! | GGACTAATGGTGGTGGATTA+GGG | + | chr7_4:7009070-7009089 | None:intergenic | 45.0% |
| ! | GGGACTAGTGGTGACAATAT+TGG | + | chr7_4:7009179-7009198 | None:intergenic | 45.0% |
| !! | TGGAACTAGCCTTTCCACTA+GGG | + | chr7_4:7009199-7009218 | None:intergenic | 45.0% |
| !! | TTGGAACTAGCCTTTCCACT+AGG | + | chr7_4:7009200-7009219 | None:intergenic | 45.0% |
| ! | GGTGTACTTGGTGGTTGTAA+TGG | + | chr7_4:7008978-7008997 | None:intergenic | 45.0% |
| GGAATTGTTGGTGTACTTGG+TGG | + | chr7_4:7009347-7009366 | None:intergenic | 45.0% | |
| !! | GTTGGTGGTTGAAATGGGTT+AGG | + | chr7_4:7009368-7009387 | None:intergenic | 45.0% |
| !! | GTTGGAGTTGGTGGTTGAAA+TGG | + | chr7_4:7009374-7009393 | None:intergenic | 45.0% |
| ! | ACTAATGGTGTTGGAGTTGG+TGG | + | chr7_4:7009383-7009402 | None:intergenic | 45.0% |
| ! | AATGGTGATGATCCTGATGG+AGG | + | chr7_4:7009428-7009447 | None:intergenic | 45.0% |
| ACCGACGGAAAAGGAAACAA+TGG | + | chr7_4:7009446-7009465 | None:intergenic | 45.0% | |
| GAAGCCTCTTTCTGCTGTTG+TGG | - | chr7_4:7007713-7007732 | Msa1137950:CDS | 50.0% | |
| CCAACCACAACAGCAGAAAG+AGG | + | chr7_4:7007720-7007739 | None:intergenic | 50.0% | |
| CCTCTTTCTGCTGTTGTGGT+TGG | - | chr7_4:7007717-7007736 | Msa1137950:CDS | 50.0% | |
| TGTTTGAGCGAGTGCTTCAC+AGG | - | chr7_4:7008012-7008031 | Msa1137950:CDS | 50.0% | |
| ! | TTCAACCGGCCGGTTCAATA+GGG | + | chr7_4:7008066-7008085 | None:intergenic | 50.0% |
| CAGGCAAACTAGCCAACTCT+TGG | + | chr7_4:7008089-7008108 | None:intergenic | 50.0% | |
| TGATGAAGATGAGGCTGCTG+AGG | + | chr7_4:7008511-7008530 | None:intergenic | 50.0% | |
| TTGGATCTTGAAGTGGGGGT+GGG | + | chr7_4:7008710-7008729 | None:intergenic | 50.0% | |
| TTTGGATCTTGAAGTGGGGG+TGG | + | chr7_4:7008711-7008730 | None:intergenic | 50.0% | |
| GGGTTTGGATCTTGAAGTGG+GGG | + | chr7_4:7008714-7008733 | None:intergenic | 50.0% | |
| GGGGTTTGGATCTTGAAGTG+GGG | + | chr7_4:7008715-7008734 | None:intergenic | 50.0% | |
| GGGGGTTTGGATCTTGAAGT+GGG | + | chr7_4:7008716-7008735 | None:intergenic | 50.0% | |
| AAGGAAGAACACCACTAGGG+GGG | + | chr7_4:7008734-7008753 | None:intergenic | 50.0% | |
| AAAGGAACTGGTGGGAGGAA+AGG | + | chr7_4:7008753-7008772 | None:intergenic | 50.0% | |
| CAGGTGCTAAAGGAACTGGT+GGG | + | chr7_4:7008761-7008780 | None:intergenic | 50.0% | |
| TCAGGTGCTAAAGGAACTGG+TGG | + | chr7_4:7008762-7008781 | None:intergenic | 50.0% | |
| !! | GGGACTAATGGTGGTGGATT+AGG | + | chr7_4:7009071-7009090 | None:intergenic | 50.0% |
| ! | GGTGTACTTGGTGGTTGTGA+TGG | + | chr7_4:7009101-7009120 | None:intergenic | 50.0% |
| GGAACAAGTGGTGTACTTGG+TGG | + | chr7_4:7009110-7009129 | None:intergenic | 50.0% | |
| TTGTCACCACTAGTCCCTAG+TGG | - | chr7_4:7009182-7009201 | Msa1137950:intron | 50.0% | |
| ACCACTAGTCCCTAGTGGAA+AGG | - | chr7_4:7009187-7009206 | Msa1137950:intron | 50.0% | |
| ! | GGGACTAATGGTGTTGGAGT+TGG | + | chr7_4:7009386-7009405 | None:intergenic | 50.0% |
| GAAGCCTCTTTCTGCTGTTG+TGG | - | chr7_4:7007713-7007732 | Msa1137950:CDS | 50.0% | |
| CCAACCACAACAGCAGAAAG+AGG | + | chr7_4:7007720-7007739 | None:intergenic | 50.0% | |
| CCTCTTTCTGCTGTTGTGGT+TGG | - | chr7_4:7007717-7007736 | Msa1137950:CDS | 50.0% | |
| TGTTTGAGCGAGTGCTTCAC+AGG | - | chr7_4:7008012-7008031 | Msa1137950:CDS | 50.0% | |
| ! | TTCAACCGGCCGGTTCAATA+GGG | + | chr7_4:7008066-7008085 | None:intergenic | 50.0% |
| CAGGCAAACTAGCCAACTCT+TGG | + | chr7_4:7008089-7008108 | None:intergenic | 50.0% | |
| TGATGAAGATGAGGCTGCTG+AGG | + | chr7_4:7008511-7008530 | None:intergenic | 50.0% | |
| TTGGATCTTGAAGTGGGGGT+GGG | + | chr7_4:7008710-7008729 | None:intergenic | 50.0% | |
| TTTGGATCTTGAAGTGGGGG+TGG | + | chr7_4:7008711-7008730 | None:intergenic | 50.0% | |
| GGGTTTGGATCTTGAAGTGG+GGG | + | chr7_4:7008714-7008733 | None:intergenic | 50.0% | |
| GGGGTTTGGATCTTGAAGTG+GGG | + | chr7_4:7008715-7008734 | None:intergenic | 50.0% | |
| GGGGGTTTGGATCTTGAAGT+GGG | + | chr7_4:7008716-7008735 | None:intergenic | 50.0% | |
| AAGGAAGAACACCACTAGGG+GGG | + | chr7_4:7008734-7008753 | None:intergenic | 50.0% | |
| AAAGGAACTGGTGGGAGGAA+AGG | + | chr7_4:7008753-7008772 | None:intergenic | 50.0% | |
| CAGGTGCTAAAGGAACTGGT+GGG | + | chr7_4:7008761-7008780 | None:intergenic | 50.0% | |
| TCAGGTGCTAAAGGAACTGG+TGG | + | chr7_4:7008762-7008781 | None:intergenic | 50.0% | |
| !! | GGGACTAATGGTGGTGGATT+AGG | + | chr7_4:7009071-7009090 | None:intergenic | 50.0% |
| ! | GGTGTACTTGGTGGTTGTGA+TGG | + | chr7_4:7009101-7009120 | None:intergenic | 50.0% |
| GGAACAAGTGGTGTACTTGG+TGG | + | chr7_4:7009110-7009129 | None:intergenic | 50.0% | |
| TTGTCACCACTAGTCCCTAG+TGG | - | chr7_4:7009182-7009201 | Msa1137950:intron | 50.0% | |
| ACCACTAGTCCCTAGTGGAA+AGG | - | chr7_4:7009187-7009206 | Msa1137950:intron | 50.0% | |
| ! | GGGACTAATGGTGTTGGAGT+TGG | + | chr7_4:7009386-7009405 | None:intergenic | 50.0% |
| ! | GTTCAACCGGCCGGTTCAAT+AGG | + | chr7_4:7008067-7008086 | None:intergenic | 55.0% |
| CAACTCTTGGTTCAACCGGC+CGG | + | chr7_4:7008076-7008095 | None:intergenic | 55.0% | |
| TGAAGTGGGGGTGGGAAAGA+AGG | + | chr7_4:7008702-7008721 | None:intergenic | 55.0% | |
| GGGGGGTTTGGATCTTGAAG+TGG | + | chr7_4:7008717-7008736 | None:intergenic | 55.0% | |
| CAAGATCCAAACCCCCCTAG+TGG | - | chr7_4:7008720-7008739 | Msa1137950:intron | 55.0% | |
| AGAACACCACTAGGGGGGTT+TGG | + | chr7_4:7008729-7008748 | None:intergenic | 55.0% | |
| GTGCTAAAGGAACTGGTGGG+AGG | + | chr7_4:7008758-7008777 | None:intergenic | 55.0% | |
| GCCTTTCCACTAGGGACTAG+TGG | + | chr7_4:7009191-7009210 | None:intergenic | 55.0% | |
| CCTGATGGAGGTGGCTGAAA+TGG | + | chr7_4:7009416-7009435 | None:intergenic | 55.0% | |
| CCATTTCAGCCACCTCCATC+AGG | - | chr7_4:7009413-7009432 | Msa1137950:five_prime_UTR | 55.0% | |
| GGTGATGATCCTGATGGAGG+TGG | + | chr7_4:7009425-7009444 | None:intergenic | 55.0% | |
| ! | GTTCAACCGGCCGGTTCAAT+AGG | + | chr7_4:7008067-7008086 | None:intergenic | 55.0% |
| CAACTCTTGGTTCAACCGGC+CGG | + | chr7_4:7008076-7008095 | None:intergenic | 55.0% | |
| TGAAGTGGGGGTGGGAAAGA+AGG | + | chr7_4:7008702-7008721 | None:intergenic | 55.0% | |
| GGGGGGTTTGGATCTTGAAG+TGG | + | chr7_4:7008717-7008736 | None:intergenic | 55.0% | |
| CAAGATCCAAACCCCCCTAG+TGG | - | chr7_4:7008720-7008739 | Msa1137950:intron | 55.0% | |
| AGAACACCACTAGGGGGGTT+TGG | + | chr7_4:7008729-7008748 | None:intergenic | 55.0% | |
| GTGCTAAAGGAACTGGTGGG+AGG | + | chr7_4:7008758-7008777 | None:intergenic | 55.0% | |
| GCCTTTCCACTAGGGACTAG+TGG | + | chr7_4:7009191-7009210 | None:intergenic | 55.0% | |
| CCTGATGGAGGTGGCTGAAA+TGG | + | chr7_4:7009416-7009435 | None:intergenic | 55.0% | |
| CCATTTCAGCCACCTCCATC+AGG | - | chr7_4:7009413-7009432 | Msa1137950:five_prime_UTR | 55.0% | |
| GGTGATGATCCTGATGGAGG+TGG | + | chr7_4:7009425-7009444 | None:intergenic | 55.0% | |
| CGGCCGGTTGAACCAAGAGT+TGG | - | chr7_4:7008074-7008093 | Msa1137950:CDS | 60.0% | |
| CGGCCGGTTGAACCAAGAGT+TGG | - | chr7_4:7008074-7008093 | Msa1137950:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 7007559 | 7009469 | 7007559 | ID=Msa1137950;Name=Msa1137950 |
| chr7_4 | mRNA | 7007559 | 7009469 | 7007559 | ID=Msa1137950-mRNA-1;Parent=Msa1137950;Name=Msa1137950-mRNA-1;_AED=0.04;_eAED=0.04;_QI=77|1|0.5|1|1|0.5|2|0|438 |
| chr7_4 | exon | 7007559 | 7008706 | 7007559 | ID=Msa1137950-mRNA-1:exon:1968;Parent=Msa1137950-mRNA-1 |
| chr7_4 | exon | 7009227 | 7009469 | 7009227 | ID=Msa1137950-mRNA-1:exon:1967;Parent=Msa1137950-mRNA-1 |
| chr7_4 | five_prime_UTR | 7009393 | 7009469 | 7009393 | ID=Msa1137950-mRNA-1:five_prime_utr;Parent=Msa1137950-mRNA-1 |
| chr7_4 | CDS | 7009227 | 7009392 | 7009227 | ID=Msa1137950-mRNA-1:cds;Parent=Msa1137950-mRNA-1 |
| chr7_4 | CDS | 7007559 | 7008706 | 7007559 | ID=Msa1137950-mRNA-1:cds;Parent=Msa1137950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
