Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066820 | XP_004492754.1 | 89.179 | 268 | 18 | 1 | 1 | 257 | 10 | 277 | 2.41e-171 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066820 | A0A1S2XQ17 | 89.179 | 268 | 18 | 1 | 1 | 257 | 10 | 277 | 1.15e-171 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0444340 | Msa1066820 | 0.803389 | 3.568710e-49 | -8.615850e-47 |
| Msa1066820 | Msa1066950 | 0.873168 | 1.812520e-67 | -8.615850e-47 |
| Msa1066820 | Msa1244770 | 0.813622 | 2.332105e-51 | -8.615850e-47 |
| Msa1066820 | Msa1355490 | 0.812301 | 4.542779e-51 | -8.615850e-47 |
| Msa0544780 | Msa1066820 | 0.804273 | 2.338379e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066820 | MtrunA17_Chr7g0247901 | 91.791 | 268 | 11 | 1 | 1 | 257 | 1 | 268 | 1.43e-172 | 476 |
| Msa1066820 | MtrunA17_Chr7g0247911 | 76.119 | 268 | 53 | 1 | 1 | 257 | 1 | 268 | 5.93e-140 | 394 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066820 | AT2G45990.2 | 77.985 | 268 | 48 | 1 | 1 | 257 | 1 | 268 | 1.41e-149 | 418 |
| Msa1066820 | AT2G45990.1 | 77.985 | 268 | 48 | 1 | 1 | 257 | 1 | 268 | 1.41e-149 | 418 |
| Msa1066820 | AT2G45990.3 | 75.746 | 268 | 49 | 2 | 1 | 257 | 1 | 263 | 5.65e-142 | 399 |
| Msa1066820 | AT2G45990.4 | 76.667 | 210 | 38 | 1 | 1 | 199 | 1 | 210 | 7.12e-111 | 318 |
Find 79 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTATTGTTTCTATTATT+TGG | -0.002985 | 7_2:+60942138 | Msa1066820:three_prime_UTR |
| CCCCATTCTTCCATAATAAT+AGG | 0.262053 | 7_2:-60940152 | None:intergenic |
| CTTCCTGATGGACGGGGTTC+TGG | 0.269485 | 7_2:-60939932 | None:intergenic |
| GAGCTGAAGAACTTGAATTC+TGG | 0.278098 | 7_2:-60941949 | None:intergenic |
| TCTTATTGTTTCTATTATTT+GGG | 0.282656 | 7_2:+60942139 | Msa1066820:three_prime_UTR |
| GACTGTTTGGATCAGGGAAT+TGG | 0.297891 | 7_2:+60941883 | Msa1066820:intron |
| CAAGTTGAAGCCTATTATTA+TGG | 0.320716 | 7_2:+60940142 | Msa1066820:CDS |
| GCAACAACCTCGCAAGTAAA+AGG | 0.326462 | 7_2:-60939903 | None:intergenic |
| GCTTGCCGTTGAGGGTATAT+TGG | 0.326642 | 7_2:+60940109 | Msa1066820:CDS |
| AAGAGAAATAAGGGAATGTT+TGG | 0.332914 | 7_2:+60938466 | None:intergenic |
| ACTGTTTGGATCAGGGAATT+GGG | 0.342469 | 7_2:+60941884 | Msa1066820:intron |
| AGCTGAAGAACTTGAATTCT+GGG | 0.349248 | 7_2:-60941948 | None:intergenic |
| GGAAGAATGGGGTGAGAATA+GGG | 0.356927 | 7_2:+60940163 | Msa1066820:CDS |
| AGATGGCCTGGTTTGTTTGA+TGG | 0.357614 | 7_2:+60938801 | Msa1066820:CDS |
| GCCTATTATTATGGAAGAAT+GGG | 0.363331 | 7_2:+60940151 | Msa1066820:CDS |
| GATGGCCTGGTTTGTTTGAT+GGG | 0.365167 | 7_2:+60938802 | Msa1066820:CDS |
| TGCTTTAGAATTTCTACCTT+GGG | 0.372680 | 7_2:-60941520 | None:intergenic |
| GCCTGGTTTGTTTGATGGGG+TGG | 0.377494 | 7_2:+60938806 | Msa1066820:CDS |
| TGGAAGAATGGGGTGAGAAT+AGG | 0.377537 | 7_2:+60940162 | Msa1066820:CDS |
| GTGCGACCGGTAGTGGAAAC+TGG | 0.384499 | 7_2:+60939871 | Msa1066820:CDS |
| AGGATATATGGTCTGGGCAC+TGG | 0.391773 | 7_2:+60941389 | Msa1066820:CDS |
| GCTTTACTTCGAGAGCTTGC+TGG | 0.393073 | 7_2:+60941347 | Msa1066820:CDS |
| AGTGTCAGCCCTTGGTGCTC+TGG | 0.397313 | 7_2:-60941556 | None:intergenic |
| AAGCAGGAGGAAAGTGAAAT+GGG | 0.399654 | 7_2:+60938526 | Msa1066820:exon |
| AAAGCAGGAGGAAAGTGAAA+TGG | 0.400941 | 7_2:+60938525 | Msa1066820:exon |
| ATACCATCTGAAAGGATATA+TGG | 0.402764 | 7_2:+60941377 | Msa1066820:CDS |
| ATCTGAAAGGATATATGGTC+TGG | 0.415001 | 7_2:+60941382 | Msa1066820:CDS |
| AGCCTATTATTATGGAAGAA+TGG | 0.416134 | 7_2:+60940150 | Msa1066820:CDS |
| TTTCATTGTCACCACAAAAC+AGG | 0.416219 | 7_2:+60941198 | Msa1066820:CDS |
| AATGGGAGAGCTTTACGCTT+TGG | 0.417877 | 7_2:+60938543 | Msa1066820:exon |
| AGACCAGAACCCCGTCCATC+AGG | 0.441329 | 7_2:+60939929 | Msa1066820:CDS |
| GCAGAGGGGCTTGCCGTTGA+GGG | 0.442318 | 7_2:+60940101 | Msa1066820:CDS |
| TGCAGAGGGGCTTGCCGTTG+AGG | 0.456207 | 7_2:+60940100 | Msa1066820:CDS |
| TTCTTGTGCAAGGTTGCAGA+GGG | 0.462379 | 7_2:+60940086 | Msa1066820:intron |
| TTGGAAAGGTCAGGGATGAA+TGG | 0.464231 | 7_2:+60940204 | Msa1066820:CDS |
| CATTAAAATTTGCAAGCTCA+AGG | 0.470306 | 7_2:+60941173 | Msa1066820:CDS |
| CCGAAGACTTCCTGATGGAC+GGG | 0.474908 | 7_2:-60939939 | None:intergenic |
| CATAATAATAGGCTTCAACT+TGG | 0.480574 | 7_2:-60940141 | None:intergenic |
| ATATATCCTTTCAGATGGTA+TGG | 0.488726 | 7_2:-60941375 | None:intergenic |
| GAAGTAAAGCATCAGCAAAT+CGG | 0.489034 | 7_2:-60941334 | None:intergenic |
| GACAAATGGAATTTGTATCT+AGG | 0.490531 | 7_2:+60941751 | Msa1066820:CDS |
| CTGCTTTAGAATTTCTACCT+TGG | 0.490956 | 7_2:-60941521 | None:intergenic |
| TGGATTCAGCTACAGAGGAT+TGG | 0.493540 | 7_2:+60938826 | Msa1066820:CDS |
| TCATATCCAGTTTCCACTAC+CGG | 0.499546 | 7_2:-60939877 | None:intergenic |
| AAGCTCTCTCTCTGCTCTCA+AGG | 0.502315 | 7_2:+60938600 | Msa1066820:CDS |
| CTTACTGCAGTGTCAGCCCT+TGG | 0.503169 | 7_2:-60941564 | None:intergenic |
| CCCGTCCATCAGGAAGTCTT+CGG | 0.503977 | 7_2:+60939939 | Msa1066820:CDS |
| GCTGCTAAAGTGAGATGGCC+TGG | 0.506629 | 7_2:+60938789 | Msa1066820:CDS |
| GGATATATGGTCTGGGCACT+GGG | 0.512731 | 7_2:+60941390 | Msa1066820:CDS |
| AAGAGCCTGAGTTAGACAAA+TGG | 0.518838 | 7_2:+60941737 | Msa1066820:CDS |
| TGCAGGCTGCTAAAGTGAGA+TGG | 0.526179 | 7_2:+60938784 | Msa1066820:intron |
| ACCGAAGACTTCCTGATGGA+CGG | 0.526632 | 7_2:-60939940 | None:intergenic |
| TTGTTCATGTCAGGTGCGAC+CGG | 0.526998 | 7_2:+60939858 | Msa1066820:intron |
| AAATTCCATTTGTCTAACTC+AGG | 0.529607 | 7_2:-60941742 | None:intergenic |
| CAACACTGCACAGGAGAAAG+AGG | 0.532803 | 7_2:+60941911 | Msa1066820:CDS |
| TAACCAGCTTTGTTGAGGAT+CGG | 0.537039 | 7_2:+60941689 | Msa1066820:intron |
| TTGAGGGTATATTGGAGAGT+TGG | 0.538203 | 7_2:+60940117 | Msa1066820:CDS |
| CTGTTTGGATCAGGGAATTG+GGG | 0.541882 | 7_2:+60941885 | Msa1066820:intron |
| ATGGCCTGGTTTGTTTGATG+GGG | 0.541966 | 7_2:+60938803 | Msa1066820:CDS |
| GTTCTTGTGCAAGGTTGCAG+AGG | 0.550341 | 7_2:+60940085 | Msa1066820:intron |
| ATTAAAATTTGCAAGCTCAA+GGG | 0.550856 | 7_2:+60941174 | Msa1066820:CDS |
| CTTTACGCTTTGGACTTCGA+TGG | 0.561411 | 7_2:+60938553 | Msa1066820:CDS |
| TCTGAAAGGATATATGGTCT+GGG | 0.569992 | 7_2:+60941383 | Msa1066820:CDS |
| AAAAGAGACCAGAGCACCAA+GGG | 0.580694 | 7_2:+60941548 | Msa1066820:CDS |
| TTTGCATATAGAATATATCC+TGG | 0.584877 | 7_2:+60941139 | Msa1066820:intron |
| ACCCACCGAAGACTTCCTGA+TGG | 0.599827 | 7_2:-60939944 | None:intergenic |
| AGACCATATATCCTTTCAGA+TGG | 0.605552 | 7_2:-60941380 | None:intergenic |
| GAGTAACCATACCATCTGAA+AGG | 0.613779 | 7_2:+60941369 | Msa1066820:CDS |
| CGAAGACTTCCTGATGGACG+GGG | 0.624936 | 7_2:-60939938 | None:intergenic |
| TCCACCCCATCAAACAAACC+AGG | 0.626332 | 7_2:-60938807 | None:intergenic |
| ACTCTCCAATATACCCTCAA+CGG | 0.634212 | 7_2:-60940114 | None:intergenic |
| TTTAATGCATCAGAAACACC+AGG | 0.634288 | 7_2:-60941157 | None:intergenic |
| TTGGGGTTACAACACTGCAC+AGG | 0.634972 | 7_2:+60941902 | Msa1066820:CDS |
| GCTGAAGAACTTGAATTCTG+GGG | 0.646930 | 7_2:-60941947 | None:intergenic |
| CCTATTATTATGGAAGAATG+GGG | 0.658487 | 7_2:+60940152 | Msa1066820:CDS |
| TGGGGTGGATTCAGCTACAG+AGG | 0.663314 | 7_2:+60938821 | Msa1066820:CDS |
| CAAAAGAGACCAGAGCACCA+AGG | 0.667405 | 7_2:+60941547 | Msa1066820:CDS |
| GGAGTCATCTGTGATAGCTG+CGG | 0.668448 | 7_2:+60938574 | Msa1066820:CDS |
| TCTTGTGCAAGGTTGCAGAG+GGG | 0.704898 | 7_2:+60940087 | Msa1066820:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTATTATAATAATAAG+GGG | + | chr7_2:60939262-60939281 | Msa1066820:intron | 10.0% |
| !!! | AACTTTTATAATGTTTATAA+AGG | - | chr7_2:60942061-60942080 | None:intergenic | 10.0% |
| !!! | TTTTCAATCTTTTATTATGT+TGG | + | chr7_2:60938708-60938727 | Msa1066820:intron | 15.0% |
| !! | TTGAATTGAATTTATTTACT+CGG | + | chr7_2:60939060-60939079 | Msa1066820:intron | 15.0% |
| !! | AGTGCAAAAAAATATTATAA+TGG | + | chr7_2:60939307-60939326 | Msa1066820:intron | 15.0% |
| !!! | ATTTTAGGAGATATTTTTAT+AGG | + | chr7_2:60939379-60939398 | Msa1066820:intron | 15.0% |
| !!! | TTTTAGGAGATATTTTTATA+GGG | + | chr7_2:60939380-60939399 | Msa1066820:intron | 15.0% |
| !! | TGACTTCTAATTATAAAATA+AGG | + | chr7_2:60939502-60939521 | Msa1066820:intron | 15.0% |
| !! | AATTATAAAATAAGGCAATT+TGG | + | chr7_2:60939510-60939529 | Msa1066820:intron | 15.0% |
| !!! | AATTTCATGAAATATTTTAC+TGG | + | chr7_2:60939711-60939730 | Msa1066820:intron | 15.0% |
| !! | TTAGTATTAAGAAAAATAAG+AGG | + | chr7_2:60941281-60941300 | Msa1066820:intron | 15.0% |
| !! | TAGTATTAAGAAAAATAAGA+GGG | + | chr7_2:60941282-60941301 | Msa1066820:intron | 15.0% |
| !!! | ATCTTATTGTTTCTATTATT+TGG | + | chr7_2:60942138-60942157 | Msa1066820:three_prime_UTR | 15.0% |
| !!! | TCTTATTGTTTCTATTATTT+GGG | + | chr7_2:60942139-60942158 | Msa1066820:three_prime_UTR | 15.0% |
| !!! | TTATGTATATTACTTTTGAT+AGG | + | chr7_2:60942193-60942212 | Msa1066820:three_prime_UTR | 15.0% |
| !!! | TTCAATGTCAAAACAATTTT+TGG | + | chr7_2:60938658-60938677 | Msa1066820:intron | 20.0% |
| !!! | TCAATGTCAAAACAATTTTT+GGG | + | chr7_2:60938659-60938678 | Msa1066820:intron | 20.0% |
| !!! | TTTTATTATGTTGGAATTCA+TGG | + | chr7_2:60938717-60938736 | Msa1066820:intron | 20.0% |
| !!! | ATTTGTTTGAAATTTTTTGC+AGG | + | chr7_2:60938767-60938786 | Msa1066820:intron | 20.0% |
| !! | TCCTAAAATACATAATCATA+GGG | - | chr7_2:60939368-60939387 | None:intergenic | 20.0% |
| !! | ATATGTTTGAAGATATTCAA+TGG | - | chr7_2:60939756-60939775 | None:intergenic | 20.0% |
| !!! | TTGTTTGGTTTTTAAAACAT+TGG | + | chr7_2:60940476-60940495 | Msa1066820:intron | 20.0% |
| !!! | AATAGGTTTTTATTTGGATA+TGG | - | chr7_2:60940896-60940915 | None:intergenic | 20.0% |
| !!! | CCATTTAATAGGTTTTTATT+TGG | - | chr7_2:60940902-60940921 | None:intergenic | 20.0% |
| !! | CCAAATAAAAACCTATTAAA+TGG | + | chr7_2:60940899-60940918 | Msa1066820:intron | 20.0% |
| !! | TTTGGAAAAAAAATCTTGTT+TGG | - | chr7_2:60940935-60940954 | None:intergenic | 20.0% |
| !! | GATGATTTCCTATTATTAAT+TGG | + | chr7_2:60941110-60941129 | Msa1066820:intron | 20.0% |
| !! | AGTATTAAGAAAAATAAGAG+GGG | + | chr7_2:60941283-60941302 | Msa1066820:intron | 20.0% |
| !!! | TTACTTTTGATAGGATAAAT+TGG | + | chr7_2:60942202-60942221 | Msa1066820:three_prime_UTR | 20.0% |
| !! | TATTTAGTTTCAGCTGTTAT+TGG | + | chr7_2:60938892-60938911 | Msa1066820:intron | 25.0% |
| !! | ACTATGTATGTAGATACTTT+TGG | + | chr7_2:60939124-60939143 | Msa1066820:intron | 25.0% |
| !! | GATACTTTTGGATGAATTTT+AGG | + | chr7_2:60939136-60939155 | Msa1066820:intron | 25.0% |
| !! | ACCCTATGATTATGTATTTT+AGG | + | chr7_2:60939364-60939383 | Msa1066820:intron | 25.0% |
| ! | CTCCTAAAATACATAATCAT+AGG | - | chr7_2:60939369-60939388 | None:intergenic | 25.0% |
| !! | TTTTATAGGGAAATGTTAGT+AGG | + | chr7_2:60939393-60939412 | Msa1066820:intron | 25.0% |
| ! | TAGTGATTATGTTAGATATC+AGG | + | chr7_2:60939417-60939436 | Msa1066820:intron | 25.0% |
| ! | AGTGATTATGTTAGATATCA+GGG | + | chr7_2:60939418-60939437 | Msa1066820:intron | 25.0% |
| !!! | CTTTTTTCAATAGTGAGTTA+AGG | - | chr7_2:60939468-60939487 | None:intergenic | 25.0% |
| !! | AAATAAGGCAATTTGGATTT+TGG | + | chr7_2:60939517-60939536 | Msa1066820:intron | 25.0% |
| ! | AAATTCAACAGTTTGAATGA+AGG | - | chr7_2:60939696-60939715 | None:intergenic | 25.0% |
| !! | CATATATTTCTATTGCCAAA+TGG | + | chr7_2:60939795-60939814 | Msa1066820:intron | 25.0% |
| ! | TTTATATAGTTGTTCATGTC+AGG | + | chr7_2:60939849-60939868 | Msa1066820:intron | 25.0% |
| ! | AATGAGAAAAAATGAGGTAT+AGG | - | chr7_2:60939976-60939995 | None:intergenic | 25.0% |
| ! | GTAGTTAATGAGAAAAAATG+AGG | - | chr7_2:60939982-60940001 | None:intergenic | 25.0% |
| ! | AAAAATTATTCCTCTGTCAA+GGG | - | chr7_2:60940281-60940300 | None:intergenic | 25.0% |
| ! | TAAAAATTATTCCTCTGTCA+AGG | - | chr7_2:60940282-60940301 | None:intergenic | 25.0% |
| !! | ATTATTTTCCTTTCTGTTCA+AGG | + | chr7_2:60940721-60940740 | Msa1066820:intron | 25.0% |
| ! | ACTAGATATTGTCATTAGTT+TGG | + | chr7_2:60940812-60940831 | Msa1066820:intron | 25.0% |
| !!! | GTTTTTATTTGGATATGGTT+AGG | - | chr7_2:60940891-60940910 | None:intergenic | 25.0% |
| ! | GCTAATCTAATCCATTTAAT+AGG | - | chr7_2:60940913-60940932 | None:intergenic | 25.0% |
| !! | AAACCAGGTTTTTGTTAATT+CGG | - | chr7_2:60940959-60940978 | None:intergenic | 25.0% |
| ! | AATTAACAAAAACCTGGTTT+CGG | + | chr7_2:60940959-60940978 | Msa1066820:intron | 25.0% |
| ! | AAGCATCACCAATTAATAAT+AGG | - | chr7_2:60941121-60941140 | None:intergenic | 25.0% |
| ! | TTTGCATATAGAATATATCC+TGG | + | chr7_2:60941139-60941158 | Msa1066820:intron | 25.0% |
| ! | ATTAAAATTTGCAAGCTCAA+GGG | + | chr7_2:60941174-60941193 | Msa1066820:CDS | 25.0% |
| ! | CAAAGCTGGTTAAAATAAAT+TGG | - | chr7_2:60941681-60941700 | None:intergenic | 25.0% |
| !!! | CTCTTTGATCACATTTTTTA+AGG | - | chr7_2:60941722-60941741 | None:intergenic | 25.0% |
| ! | AAGACCAATAATACAGAAAA+CGG | - | chr7_2:60941832-60941851 | None:intergenic | 25.0% |
| ! | TTCAGCAAAAAGTTGAAATA+GGG | + | chr7_2:60941978-60941997 | Msa1066820:CDS | 25.0% |
| !! | TTTTTCAGCTTAACTGCAAA+TGG | - | chr7_2:60938508-60938527 | None:intergenic | 30.0% |
| TGCACATAGTAAATACTTTC+TGG | + | chr7_2:60938862-60938881 | Msa1066820:intron | 30.0% | |
| ! | TGTGCTATGTTTTGTGTTTT+TGG | + | chr7_2:60938928-60938947 | Msa1066820:intron | 30.0% |
| AGTTTATGTATCTTAAGACG+AGG | + | chr7_2:60939000-60939019 | Msa1066820:intron | 30.0% | |
| ! | AGGTATTCGATTTGAATTCT+GGG | + | chr7_2:60939020-60939039 | Msa1066820:intron | 30.0% |
| !!! | GTGTAAAAGTTTTTTACGCA+TGG | + | chr7_2:60939086-60939105 | Msa1066820:intron | 30.0% |
| TAGATACATAAAGAGTAGTC+TGG | + | chr7_2:60939582-60939601 | Msa1066820:intron | 30.0% | |
| CATAATAATAGGCTTCAACT+TGG | - | chr7_2:60940144-60940163 | None:intergenic | 30.0% | |
| ! | CAAGTTGAAGCCTATTATTA+TGG | + | chr7_2:60940142-60940161 | Msa1066820:CDS | 30.0% |
| AGCCTATTATTATGGAAGAA+TGG | + | chr7_2:60940150-60940169 | Msa1066820:CDS | 30.0% | |
| GCCTATTATTATGGAAGAAT+GGG | + | chr7_2:60940151-60940170 | Msa1066820:CDS | 30.0% | |
| CCTATTATTATGGAAGAATG+GGG | + | chr7_2:60940152-60940171 | Msa1066820:CDS | 30.0% | |
| !! | GTTGATAGATCTTTTTGGAA+AGG | + | chr7_2:60940190-60940209 | Msa1066820:CDS | 30.0% |
| !!! | CGGTTCAACTTTTAAAACAT+TGG | - | chr7_2:60940319-60940338 | None:intergenic | 30.0% |
| TTATTTGAACGGTTCAATCA+TGG | - | chr7_2:60940409-60940428 | None:intergenic | 30.0% | |
| CTAAAGTTCGGTTATTTGAA+CGG | - | chr7_2:60940420-60940439 | None:intergenic | 30.0% | |
| ATATCTCCACAGAATGATTT+AGG | - | chr7_2:60940533-60940552 | None:intergenic | 30.0% | |
| AACATGAATCCATGAACATT+CGG | + | chr7_2:60940558-60940577 | Msa1066820:intron | 30.0% | |
| TTATATCCGTCTTTGTATTC+TGG | + | chr7_2:60940778-60940797 | Msa1066820:intron | 30.0% | |
| ! | GGTTTTTGTTAATTCGGTTT+TGG | - | chr7_2:60940953-60940972 | None:intergenic | 30.0% |
| AAACCGAATTAACAAAAACC+TGG | + | chr7_2:60940953-60940972 | Msa1066820:intron | 30.0% | |
| CATTAAAATTTGCAAGCTCA+AGG | + | chr7_2:60941173-60941192 | Msa1066820:CDS | 30.0% | |
| ATATATCCTTTCAGATGGTA+TGG | - | chr7_2:60941378-60941397 | None:intergenic | 30.0% | |
| ATACCATCTGAAAGGATATA+TGG | + | chr7_2:60941377-60941396 | Msa1066820:CDS | 30.0% | |
| !! | TGCTTTAGAATTTCTACCTT+GGG | - | chr7_2:60941523-60941542 | None:intergenic | 30.0% |
| TTATGTGAATTTGCCAAAGA+TGG | + | chr7_2:60941634-60941653 | Msa1066820:intron | 30.0% | |
| !!! | TATTTTAACCAGCTTTGTTG+AGG | + | chr7_2:60941684-60941703 | Msa1066820:intron | 30.0% |
| AAATTCCATTTGTCTAACTC+AGG | - | chr7_2:60941745-60941764 | None:intergenic | 30.0% | |
| GACAAATGGAATTTGTATCT+AGG | + | chr7_2:60941751-60941770 | Msa1066820:CDS | 30.0% | |
| AGACCAATAATACAGAAAAC+GGG | - | chr7_2:60941831-60941850 | None:intergenic | 30.0% | |
| !! | ACTTGATAATGATGACTGTT+TGG | + | chr7_2:60941870-60941889 | Msa1066820:intron | 30.0% |
| CTTCAGCAAAAAGTTGAAAT+AGG | + | chr7_2:60941977-60941996 | Msa1066820:CDS | 30.0% | |
| TCAGCAAAAAGTTGAAATAG+GGG | + | chr7_2:60941979-60941998 | Msa1066820:CDS | 30.0% | |
| ! | GAGGTATTCGATTTGAATTC+TGG | + | chr7_2:60939019-60939038 | Msa1066820:intron | 35.0% |
| CATACATAGTGATGTGTGAT+TGG | - | chr7_2:60939114-60939133 | None:intergenic | 35.0% | |
| GCACAGAATAAGCTTGAATT+TGG | + | chr7_2:60939331-60939350 | Msa1066820:intron | 35.0% | |
| !!! | CAATTTGGATTTTGGAACGA+TGG | + | chr7_2:60939525-60939544 | Msa1066820:intron | 35.0% |
| !!! | ATTTTGGAACGATGGAGAAT+TGG | + | chr7_2:60939533-60939552 | Msa1066820:intron | 35.0% |
| TACTATGATGCGTGAATTTG+AGG | + | chr7_2:60939628-60939647 | Msa1066820:intron | 35.0% | |
| ! | TATTTCTATTGCCAAATGGC+TGG | + | chr7_2:60939799-60939818 | Msa1066820:intron | 35.0% |
| ! | ATGAAAACCTTTTACTTGCG+AGG | + | chr7_2:60939896-60939915 | Msa1066820:CDS | 35.0% |
| CCCCATTCTTCCATAATAAT+AGG | - | chr7_2:60940155-60940174 | None:intergenic | 35.0% | |
| !!! | GAAGCGTTGATAGATCTTTT+TGG | + | chr7_2:60940185-60940204 | Msa1066820:CDS | 35.0% |
| !! | TAGATCTTTTTGGAAAGGTC+AGG | + | chr7_2:60940195-60940214 | Msa1066820:CDS | 35.0% |
| !! | AGATCTTTTTGGAAAGGTCA+GGG | + | chr7_2:60940196-60940215 | Msa1066820:CDS | 35.0% |
| ! | TTTGAATGGTTTAGAGCAGT+TGG | - | chr7_2:60940375-60940394 | None:intergenic | 35.0% |
| ! | ACCAGTTGAAATGTCTTGTT+TGG | + | chr7_2:60940461-60940480 | Msa1066820:intron | 35.0% |
| ACCAAACAAGACATTTCAAC+TGG | - | chr7_2:60940465-60940484 | None:intergenic | 35.0% | |
| GAGAAACCTAAATCATTCTG+TGG | + | chr7_2:60940524-60940543 | Msa1066820:intron | 35.0% | |
| TCTCATAAACCGAATGTTCA+TGG | - | chr7_2:60940570-60940589 | None:intergenic | 35.0% | |
| ACATATGTTCAATCTTGCAC+TGG | - | chr7_2:60940597-60940616 | None:intergenic | 35.0% | |
| ! | AGGACATGTTGTGATTCTTT+TGG | + | chr7_2:60940684-60940703 | Msa1066820:intron | 35.0% |
| TCCTAGAATATCATCTCCAA+CGG | - | chr7_2:60940752-60940771 | None:intergenic | 35.0% | |
| GCATAACCAGAATACAAAGA+CGG | - | chr7_2:60940787-60940806 | None:intergenic | 35.0% | |
| !! | ATCCTGCTGTATTGCTATTT+AGG | + | chr7_2:60940853-60940872 | Msa1066820:intron | 35.0% |
| !! | TCCTGCTGTATTGCTATTTA+GGG | + | chr7_2:60940854-60940873 | Msa1066820:intron | 35.0% |
| TTTAATGCATCAGAAACACC+AGG | - | chr7_2:60941160-60941179 | None:intergenic | 35.0% | |
| TTTCATTGTCACCACAAAAC+AGG | + | chr7_2:60941198-60941217 | Msa1066820:CDS | 35.0% | |
| ! | AGCAAAGTTTACCTGTTTTG+TGG | - | chr7_2:60941212-60941231 | None:intergenic | 35.0% |
| TTTGCTCTTTACCCTAGTAA+GGG | + | chr7_2:60941226-60941245 | Msa1066820:intron | 35.0% | |
| ATAAGAGGGGATGAAGTAAT+TGG | + | chr7_2:60941296-60941315 | Msa1066820:intron | 35.0% | |
| ! | GAAGTAAAGCATCAGCAAAT+CGG | - | chr7_2:60941337-60941356 | None:intergenic | 35.0% |
| AGACCATATATCCTTTCAGA+TGG | - | chr7_2:60941383-60941402 | None:intergenic | 35.0% | |
| ATCTGAAAGGATATATGGTC+TGG | + | chr7_2:60941382-60941401 | Msa1066820:CDS | 35.0% | |
| TCTGAAAGGATATATGGTCT+GGG | + | chr7_2:60941383-60941402 | Msa1066820:CDS | 35.0% | |
| !! | CTGCTTTAGAATTTCTACCT+TGG | - | chr7_2:60941524-60941543 | None:intergenic | 35.0% |
| AATATCTCGAAGACCATCTT+TGG | - | chr7_2:60941650-60941669 | None:intergenic | 35.0% | |
| ! | GTTCCCGTTTTCTGTATTAT+TGG | + | chr7_2:60941825-60941844 | Msa1066820:intron | 35.0% |
| TAATGATGACTGTTTGGATC+AGG | + | chr7_2:60941876-60941895 | Msa1066820:intron | 35.0% | |
| AATGATGACTGTTTGGATCA+GGG | + | chr7_2:60941877-60941896 | Msa1066820:intron | 35.0% | |
| AGCTGAAGAACTTGAATTCT+GGG | - | chr7_2:60941951-60941970 | None:intergenic | 35.0% | |
| TGCAGTTAAGCTGAAAAAGC+AGG | + | chr7_2:60938510-60938529 | Msa1066820:five_prime_UTR | 40.0% | |
| AGTTAAGCTGAAAAAGCAGG+AGG | + | chr7_2:60938513-60938532 | Msa1066820:five_prime_UTR | 40.0% | |
| AAAGCAGGAGGAAAGTGAAA+TGG | + | chr7_2:60938525-60938544 | Msa1066820:exon | 40.0% | |
| AAGCAGGAGGAAAGTGAAAT+GGG | + | chr7_2:60938526-60938545 | Msa1066820:exon | 40.0% | |
| TGTCTTAGTCTCAGCTGTTA+TGG | + | chr7_2:60939191-60939210 | Msa1066820:intron | 40.0% | |
| TGTACTACTGTGCTATGCTT+TGG | + | chr7_2:60939221-60939240 | Msa1066820:intron | 40.0% | |
| AGTGAGTTAAGGCACATTAG+AGG | - | chr7_2:60939457-60939476 | None:intergenic | 40.0% | |
| !! | AGAGTGGATTAGTAGCATCT+TGG | - | chr7_2:60939609-60939628 | None:intergenic | 40.0% |
| ATTCACGCATCATAGTAGAG+TGG | - | chr7_2:60939625-60939644 | None:intergenic | 40.0% | |
| TGAAATCAAGTCCAGCCATT+TGG | - | chr7_2:60939813-60939832 | None:intergenic | 40.0% | |
| TCATATCCAGTTTCCACTAC+CGG | - | chr7_2:60939880-60939899 | None:intergenic | 40.0% | |
| !! | TAAACCTAGCTTTAGCTACG+TGG | - | chr7_2:60940004-60940023 | None:intergenic | 40.0% |
| GATGTCATTGTTCTTGTGCA+AGG | + | chr7_2:60940076-60940095 | Msa1066820:intron | 40.0% | |
| ACTCTCCAATATACCCTCAA+CGG | - | chr7_2:60940117-60940136 | None:intergenic | 40.0% | |
| ! | TTGAGGGTATATTGGAGAGT+TGG | + | chr7_2:60940117-60940136 | Msa1066820:CDS | 40.0% |
| ! | CTGCTCTAAACCATTCAAAC+CGG | + | chr7_2:60940376-60940395 | Msa1066820:intron | 40.0% |
| ! | TGCTCTAAACCATTCAAACC+GGG | + | chr7_2:60940377-60940396 | Msa1066820:intron | 40.0% |
| !!! | GTTCAATCATGGTTTTGTCC+CGG | - | chr7_2:60940398-60940417 | None:intergenic | 40.0% |
| ! | AACGGACACTGTCTAAAGTT+CGG | - | chr7_2:60940432-60940451 | None:intergenic | 40.0% |
| TCAACTGGTTGAACCATGAA+CGG | - | chr7_2:60940450-60940469 | None:intergenic | 40.0% | |
| TAGGTTTCTCATCATGCATC+TGG | - | chr7_2:60940514-60940533 | None:intergenic | 40.0% | |
| GTTAGACAAGTGGCTGAATT+GGG | - | chr7_2:60940626-60940645 | None:intergenic | 40.0% | |
| AGTTAGACAAGTGGCTGAAT+TGG | - | chr7_2:60940627-60940646 | None:intergenic | 40.0% | |
| CACTTGTCTAACTTGAGAGT+GGG | + | chr7_2:60940634-60940653 | Msa1066820:intron | 40.0% | |
| ! | GTTGTGATTCTTTTGGACTG+TGG | + | chr7_2:60940691-60940710 | Msa1066820:intron | 40.0% |
| TCCGTTGGAGATGATATTCT+AGG | + | chr7_2:60940748-60940767 | Msa1066820:intron | 40.0% | |
| !! | CCTGCTGTATTGCTATTTAG+GGG | + | chr7_2:60940855-60940874 | Msa1066820:intron | 40.0% |
| CAAAAACCTGGTTTCGGATA+TGG | + | chr7_2:60940965-60940984 | Msa1066820:intron | 40.0% | |
| TCGGATATGGTTGTAGTTTG+TGG | + | chr7_2:60940978-60940997 | Msa1066820:intron | 40.0% | |
| ATATTCAGCCAACAGGAGTA+GGG | - | chr7_2:60941028-60941047 | None:intergenic | 40.0% | |
| AATATTCAGCCAACAGGAGT+AGG | - | chr7_2:60941029-60941048 | None:intergenic | 40.0% | |
| GATGTCAATATTCAGCCAAC+AGG | - | chr7_2:60941035-60941054 | None:intergenic | 40.0% | |
| CTTTGCTCTTTACCCTAGTA+AGG | + | chr7_2:60941225-60941244 | Msa1066820:intron | 40.0% | |
| ACTCTCTATTGTTGCGATCA+TGG | - | chr7_2:60941254-60941273 | None:intergenic | 40.0% | |
| GAGTAACCATACCATCTGAA+AGG | + | chr7_2:60941369-60941388 | Msa1066820:CDS | 40.0% | |
| !! | TTATTTTACCCACAGTCCCA+AGG | + | chr7_2:60941504-60941523 | Msa1066820:intron | 40.0% |
| AATTTCTACCTTGGGACTGT+GGG | - | chr7_2:60941515-60941534 | None:intergenic | 40.0% | |
| ! | TAGCAGCACTCAATGTCTTT+TGG | + | chr7_2:60941601-60941620 | Msa1066820:intron | 40.0% |
| !! | TAACCAGCTTTGTTGAGGAT+CGG | + | chr7_2:60941689-60941708 | Msa1066820:intron | 40.0% |
| AAGAGCCTGAGTTAGACAAA+TGG | + | chr7_2:60941737-60941756 | Msa1066820:CDS | 40.0% | |
| ACTGAGACAAAAATGAGGGA+GGG | - | chr7_2:60941807-60941826 | None:intergenic | 40.0% | |
| AACTGAGACAAAAATGAGGG+AGG | - | chr7_2:60941808-60941827 | None:intergenic | 40.0% | |
| GGGAACTGAGACAAAAATGA+GGG | - | chr7_2:60941811-60941830 | None:intergenic | 40.0% | |
| ACTGTTTGGATCAGGGAATT+GGG | + | chr7_2:60941884-60941903 | Msa1066820:intron | 40.0% | |
| GCTGAAGAACTTGAATTCTG+GGG | - | chr7_2:60941950-60941969 | None:intergenic | 40.0% | |
| GAGCTGAAGAACTTGAATTC+TGG | - | chr7_2:60941952-60941971 | None:intergenic | 40.0% | |
| AATGGGAGAGCTTTACGCTT+TGG | + | chr7_2:60938543-60938562 | Msa1066820:exon | 45.0% | |
| ! | CTTTACGCTTTGGACTTCGA+TGG | + | chr7_2:60938553-60938572 | Msa1066820:CDS | 45.0% |
| !! | AGATGGCCTGGTTTGTTTGA+TGG | + | chr7_2:60938801-60938820 | Msa1066820:CDS | 45.0% |
| !! | GATGGCCTGGTTTGTTTGAT+GGG | + | chr7_2:60938802-60938821 | Msa1066820:CDS | 45.0% |
| !! | ATGGCCTGGTTTGTTTGATG+GGG | + | chr7_2:60938803-60938822 | Msa1066820:CDS | 45.0% |
| TGGATTCAGCTACAGAGGAT+TGG | + | chr7_2:60938826-60938845 | Msa1066820:CDS | 45.0% | |
| AGATATCAGGGTTTAGACCC+TGG | + | chr7_2:60939430-60939449 | Msa1066820:intron | 45.0% | |
| TAAGGCACATTAGAGGTCCA+GGG | - | chr7_2:60939450-60939469 | None:intergenic | 45.0% | |
| TTAAGGCACATTAGAGGTCC+AGG | - | chr7_2:60939451-60939470 | None:intergenic | 45.0% | |
| GCAACAACCTCGCAAGTAAA+AGG | - | chr7_2:60939906-60939925 | None:intergenic | 45.0% | |
| ACTACCACGTAGCTAAAGCT+AGG | + | chr7_2:60939997-60940016 | Msa1066820:intron | 45.0% | |
| TTCTTGTGCAAGGTTGCAGA+GGG | + | chr7_2:60940086-60940105 | Msa1066820:intron | 45.0% | |
| TGGAAGAATGGGGTGAGAAT+AGG | + | chr7_2:60940162-60940181 | Msa1066820:CDS | 45.0% | |
| GGAAGAATGGGGTGAGAATA+GGG | + | chr7_2:60940163-60940182 | Msa1066820:CDS | 45.0% | |
| TTGGAAAGGTCAGGGATGAA+TGG | + | chr7_2:60940204-60940223 | Msa1066820:CDS | 45.0% | |
| AAAGGTCAGGGATGAATGGT+TGG | + | chr7_2:60940208-60940227 | Msa1066820:intron | 45.0% | |
| !! | CAGGATTTTGCTGCTTGGAT+TGG | + | chr7_2:60940233-60940252 | Msa1066820:intron | 45.0% |
| AGTTGAACCGTACATCGAAC+TGG | + | chr7_2:60940329-60940348 | Msa1066820:intron | 45.0% | |
| !!! | TGGTTTTGTCCCGGTTTGAA+TGG | - | chr7_2:60940389-60940408 | None:intergenic | 45.0% |
| CTTTAGACAGTGTCCGTTCA+TGG | + | chr7_2:60940434-60940453 | Msa1066820:intron | 45.0% | |
| CCACTCTCAAGTTAGACAAG+TGG | - | chr7_2:60940636-60940655 | None:intergenic | 45.0% | |
| CCACTTGTCTAACTTGAGAG+TGG | + | chr7_2:60940633-60940652 | Msa1066820:intron | 45.0% | |
| AGTGGGAGATCCGTTAGATT+GGG | + | chr7_2:60940651-60940670 | Msa1066820:intron | 45.0% | |
| ACTCTACTCCCCCAATCTAA+CGG | - | chr7_2:60940664-60940683 | None:intergenic | 45.0% | |
| TTAGATTGGGGGAGTAGAGT+AGG | + | chr7_2:60940664-60940683 | Msa1066820:intron | 45.0% | |
| CGGAACTTCCTTGAACAGAA+AGG | - | chr7_2:60940732-60940751 | None:intergenic | 45.0% | |
| TCTGTTCAAGGAAGTTCCGT+TGG | + | chr7_2:60940733-60940752 | Msa1066820:intron | 45.0% | |
| CCCCTAAATAGCAATACAGC+AGG | - | chr7_2:60940858-60940877 | None:intergenic | 45.0% | |
| CTACAACCATATCCGAAACC+AGG | - | chr7_2:60940974-60940993 | None:intergenic | 45.0% | |
| ! | TGTAGTTTGTGGCTTCCAAC+CGG | + | chr7_2:60940989-60941008 | Msa1066820:intron | 45.0% |
| GTAGGGGTGAGCAAAATATC+CGG | - | chr7_2:60941011-60941030 | None:intergenic | 45.0% | |
| TATTCAGCCAACAGGAGTAG+GGG | - | chr7_2:60941027-60941046 | None:intergenic | 45.0% | |
| CGATCATGGTTCCCTTACTA+GGG | - | chr7_2:60941240-60941259 | None:intergenic | 45.0% | |
| GAATTTCTACCTTGGGACTG+TGG | - | chr7_2:60941516-60941535 | None:intergenic | 45.0% | |
| ! | AAAAGAGACCAGAGCACCAA+GGG | + | chr7_2:60941548-60941567 | Msa1066820:CDS | 45.0% |
| CGGGAACTGAGACAAAAATG+AGG | - | chr7_2:60941812-60941831 | None:intergenic | 45.0% | |
| GACTGTTTGGATCAGGGAAT+TGG | + | chr7_2:60941883-60941902 | Msa1066820:intron | 45.0% | |
| CTGTTTGGATCAGGGAATTG+GGG | + | chr7_2:60941885-60941904 | Msa1066820:intron | 45.0% | |
| !! | ATTTGATTATTATAATAATA+AGG | + | chr7_2:60939260-60939279 | Msa1066820:intron | 5.0% |
| !! | TTTGATTATTATAATAATAA+GGG | + | chr7_2:60939261-60939280 | Msa1066820:intron | 5.0% |
| GGAGTCATCTGTGATAGCTG+CGG | + | chr7_2:60938574-60938593 | Msa1066820:CDS | 50.0% | |
| AAGCTCTCTCTCTGCTCTCA+AGG | + | chr7_2:60938600-60938619 | Msa1066820:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGATGG+AGG | - | chr7_2:60938628-60938647 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr7_2:60938631-60938650 | None:intergenic | 50.0% | |
| TGCAGGCTGCTAAAGTGAGA+TGG | + | chr7_2:60938784-60938803 | Msa1066820:intron | 50.0% | |
| TCCACCCCATCAAACAAACC+AGG | - | chr7_2:60938810-60938829 | None:intergenic | 50.0% | |
| TTGTTCATGTCAGGTGCGAC+CGG | + | chr7_2:60939858-60939877 | Msa1066820:intron | 50.0% | |
| ACCGAAGACTTCCTGATGGA+CGG | - | chr7_2:60939943-60939962 | None:intergenic | 50.0% | |
| TCCATCAGGAAGTCTTCGGT+GGG | + | chr7_2:60939943-60939962 | Msa1066820:intron | 50.0% | |
| GTTCTTGTGCAAGGTTGCAG+AGG | + | chr7_2:60940085-60940104 | Msa1066820:intron | 50.0% | |
| TCTTGTGCAAGGTTGCAGAG+GGG | + | chr7_2:60940087-60940106 | Msa1066820:intron | 50.0% | |
| ! | GCTTGCCGTTGAGGGTATAT+TGG | + | chr7_2:60940109-60940128 | Msa1066820:CDS | 50.0% |
| ! | TGGAGCAGGATTTTGCTGCT+TGG | + | chr7_2:60940228-60940247 | Msa1066820:intron | 50.0% |
| !! | CTGCTTGGATTGGTGCAAAC+AGG | + | chr7_2:60940243-60940262 | Msa1066820:intron | 50.0% |
| TTCCTCTGTCAAGGGACGAT+TGG | - | chr7_2:60940273-60940292 | None:intergenic | 50.0% | |
| GAGTGGGAGATCCGTTAGAT+TGG | + | chr7_2:60940650-60940669 | Msa1066820:intron | 50.0% | |
| GTGGGAGATCCGTTAGATTG+GGG | + | chr7_2:60940652-60940671 | Msa1066820:intron | 50.0% | |
| TGGGAGATCCGTTAGATTGG+GGG | + | chr7_2:60940653-60940672 | Msa1066820:intron | 50.0% | |
| GGGTGAGCAAAATATCCGGT+TGG | - | chr7_2:60941007-60941026 | None:intergenic | 50.0% | |
| GCGATCATGGTTCCCTTACT+AGG | - | chr7_2:60941241-60941260 | None:intergenic | 50.0% | |
| GCTTTACTTCGAGAGCTTGC+TGG | + | chr7_2:60941347-60941366 | Msa1066820:CDS | 50.0% | |
| AGGATATATGGTCTGGGCAC+TGG | + | chr7_2:60941389-60941408 | Msa1066820:CDS | 50.0% | |
| GGATATATGGTCTGGGCACT+GGG | + | chr7_2:60941390-60941409 | Msa1066820:CDS | 50.0% | |
| ! | CAAAAGAGACCAGAGCACCA+AGG | + | chr7_2:60941547-60941566 | Msa1066820:CDS | 50.0% |
| TAGCCGATCCTCAACAAAGC+TGG | - | chr7_2:60941695-60941714 | None:intergenic | 50.0% | |
| TTGGGGTTACAACACTGCAC+AGG | + | chr7_2:60941902-60941921 | Msa1066820:CDS | 50.0% | |
| CAACACTGCACAGGAGAAAG+AGG | + | chr7_2:60941911-60941930 | Msa1066820:CDS | 50.0% | |
| GCTGCTAAAGTGAGATGGCC+TGG | + | chr7_2:60938789-60938808 | Msa1066820:CDS | 55.0% | |
| !! | GCCTGGTTTGTTTGATGGGG+TGG | + | chr7_2:60938806-60938825 | Msa1066820:CDS | 55.0% |
| ! | TGGGGTGGATTCAGCTACAG+AGG | + | chr7_2:60938821-60938840 | Msa1066820:CDS | 55.0% |
| ! | CGAAGACTTCCTGATGGACG+GGG | - | chr7_2:60939941-60939960 | None:intergenic | 55.0% |
| ! | CCGAAGACTTCCTGATGGAC+GGG | - | chr7_2:60939942-60939961 | None:intergenic | 55.0% |
| CCCGTCCATCAGGAAGTCTT+CGG | + | chr7_2:60939939-60939958 | Msa1066820:CDS | 55.0% | |
| GTCCATCAGGAAGTCTTCGG+TGG | + | chr7_2:60939942-60939961 | Msa1066820:intron | 55.0% | |
| ACCCACCGAAGACTTCCTGA+TGG | - | chr7_2:60939947-60939966 | None:intergenic | 55.0% | |
| CAGGGATGAATGGTTGGAGC+AGG | + | chr7_2:60940214-60940233 | Msa1066820:intron | 55.0% | |
| GTCCAATCGTCCCTTGACAG+AGG | + | chr7_2:60940268-60940287 | Msa1066820:intron | 55.0% | |
| GGTCTCGCCAGTTCGATGTA+CGG | - | chr7_2:60940339-60940358 | None:intergenic | 55.0% | |
| ATCGAACTGGCGAGACCTCT+GGG | + | chr7_2:60940342-60940361 | Msa1066820:intron | 55.0% | |
| GCAGTTGGATCATGACCCAG+AGG | - | chr7_2:60940360-60940379 | None:intergenic | 55.0% | |
| TTGCTCACCCCTACTCCTGT+TGG | + | chr7_2:60941017-60941036 | Msa1066820:intron | 55.0% | |
| CTTACTGCAGTGTCAGCCCT+TGG | - | chr7_2:60941567-60941586 | None:intergenic | 55.0% | |
| ATGTCAGGTGCGACCGGTAG+TGG | + | chr7_2:60939864-60939883 | Msa1066820:intron | 60.0% | |
| !! | GTGCGACCGGTAGTGGAAAC+TGG | + | chr7_2:60939871-60939890 | Msa1066820:CDS | 60.0% |
| AGACCAGAACCCCGTCCATC+AGG | + | chr7_2:60939929-60939948 | Msa1066820:CDS | 60.0% | |
| ! | CTTCCTGATGGACGGGGTTC+TGG | - | chr7_2:60939935-60939954 | None:intergenic | 60.0% |
| CATCGAACTGGCGAGACCTC+TGG | + | chr7_2:60940341-60940360 | Msa1066820:intron | 60.0% | |
| !! | AGTGTCAGCCCTTGGTGCTC+TGG | - | chr7_2:60941559-60941578 | None:intergenic | 60.0% |
| TGCAGAGGGGCTTGCCGTTG+AGG | + | chr7_2:60940100-60940119 | Msa1066820:CDS | 65.0% | |
| GCAGAGGGGCTTGCCGTTGA+GGG | + | chr7_2:60940101-60940120 | Msa1066820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 60938476 | 60942225 | 60938476 | ID=Msa1066820;Name=Msa1066820 |
| chr7_2 | mRNA | 60938476 | 60942225 | 60938476 | ID=Msa1066820-mRNA-1;Parent=Msa1066820;Name=Msa1066820-mRNA-1;_AED=0.38;_eAED=0.38;_QI=68|0.77|0.8|1|0.88|0.9|10|227|257 |
| chr7_2 | exon | 60938476 | 60938621 | 60938476 | ID=Msa1066820-mRNA-1:exon:12144;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60938789 | 60938869 | 60938789 | ID=Msa1066820-mRNA-1:exon:12145;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60939871 | 60939960 | 60939871 | ID=Msa1066820-mRNA-1:exon:12146;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60940098 | 60940225 | 60940098 | ID=Msa1066820-mRNA-1:exon:12147;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60940633 | 60940638 | 60940633 | ID=Msa1066820-mRNA-1:exon:12148;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60941150 | 60941219 | 60941150 | ID=Msa1066820-mRNA-1:exon:12149;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60941332 | 60941411 | 60941332 | ID=Msa1066820-mRNA-1:exon:12150;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60941519 | 60941581 | 60941519 | ID=Msa1066820-mRNA-1:exon:12151;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60941696 | 60941772 | 60941696 | ID=Msa1066820-mRNA-1:exon:12152;Parent=Msa1066820-mRNA-1 |
| chr7_2 | exon | 60941898 | 60942225 | 60941898 | ID=Msa1066820-mRNA-1:exon:12153;Parent=Msa1066820-mRNA-1 |
| chr7_2 | five_prime_UTR | 60938476 | 60938543 | 60938476 | ID=Msa1066820-mRNA-1:five_prime_utr;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60938544 | 60938621 | 60938544 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60938789 | 60938869 | 60938789 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60939871 | 60939960 | 60939871 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60940098 | 60940225 | 60940098 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60940633 | 60940638 | 60940633 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60941150 | 60941219 | 60941150 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60941332 | 60941411 | 60941332 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60941519 | 60941581 | 60941519 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60941696 | 60941772 | 60941696 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | CDS | 60941898 | 60941998 | 60941898 | ID=Msa1066820-mRNA-1:cds;Parent=Msa1066820-mRNA-1 |
| chr7_2 | three_prime_UTR | 60941999 | 60942225 | 60941999 | ID=Msa1066820-mRNA-1:three_prime_utr;Parent=Msa1066820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
