Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081190 | XP_013450277.1 | 98.485 | 330 | 3 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081190 | sp|Q8GW10|BAH1L_ARATH | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.28e-140 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081190 | A0A072UEU1 | 98.485 | 330 | 3 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042550 | Msa1081190 | 0.804783 | 1.830377e-49 | -8.615850e-47 |
| Msa0622120 | Msa1081190 | 0.812096 | 5.034708e-51 | -8.615850e-47 |
| Msa0173390 | Msa1081190 | 0.807417 | 5.107848e-50 | -8.615850e-47 |
| Msa0178510 | Msa1081190 | 0.804725 | 1.881579e-49 | -8.615850e-47 |
| Msa0388670 | Msa1081190 | 0.933587 | 1.494281e-95 | -8.615850e-47 |
| Msa0397820 | Msa1081190 | 0.822154 | 2.756499e-53 | -8.615850e-47 |
| Msa0473330 | Msa1081190 | 0.802962 | 4.373752e-49 | -8.615850e-47 |
| Msa1081190 | Msa1081200 | 0.972033 | 4.131363e-134 | -8.615850e-47 |
| Msa1081190 | Msa1126550 | 0.978273 | 1.759319e-145 | -8.615850e-47 |
| Msa1081190 | Msa1357080 | 0.811334 | 7.374232e-51 | -8.615850e-47 |
| Msa0526020 | Msa1081190 | 0.802404 | 5.701515e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081190 | MtrunA17_Chr7g0268131 | 98.485 | 330 | 3 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Msa1081190 | MtrunA17_Chr7g0269281 | 42.598 | 331 | 173 | 3 | 1 | 329 | 1 | 316 | 1.05e-83 | 255 |
| Msa1081190 | MtrunA17_Chr1g0195671 | 41.088 | 331 | 178 | 3 | 1 | 329 | 1 | 316 | 1.07e-83 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081190 | AT2G38920.5 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.35e-141 | 402 |
| Msa1081190 | AT2G38920.1 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.35e-141 | 402 |
| Msa1081190 | AT2G38920.6 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.35e-141 | 402 |
| Msa1081190 | AT2G38920.2 | 60.000 | 335 | 125 | 5 | 1 | 328 | 1 | 333 | 1.73e-139 | 398 |
| Msa1081190 | AT1G02860.1 | 42.105 | 342 | 178 | 8 | 1 | 329 | 1 | 335 | 1.60e-88 | 269 |
| Msa1081190 | AT2G38920.4 | 58.475 | 236 | 90 | 4 | 1 | 229 | 1 | 235 | 3.38e-87 | 262 |
| Msa1081190 | AT1G02860.2 | 42.105 | 342 | 176 | 9 | 1 | 329 | 1 | 333 | 2.93e-86 | 263 |
| Msa1081190 | AT2G38920.3 | 57.269 | 227 | 89 | 4 | 1 | 220 | 1 | 226 | 9.15e-81 | 245 |
| Msa1081190 | AT1G02860.3 | 38.430 | 242 | 129 | 8 | 1 | 229 | 1 | 235 | 4.27e-45 | 154 |
Find 88 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCAGTCAAGGGAATTT+TGG | 0.164505 | 7_2:-80990764 | Msa1081190:CDS |
| AATCCTATTAAGAGATATTA+TGG | 0.169364 | 7_2:-80990379 | Msa1081190:three_prime_UTR |
| ACTCTGGACTTGCAGCTTTA+AGG | 0.187562 | 7_2:+80992031 | None:intergenic |
| TTCTCAGGTGCAAAGATTAT+TGG | 0.189972 | 7_2:-80990821 | Msa1081190:intron |
| AGAATTGTTCAAATAAAATT+TGG | 0.193267 | 7_2:+80990466 | None:intergenic |
| CAATTAGAATTCTCCCTTCT+TGG | 0.214086 | 7_2:+80992823 | None:intergenic |
| CCTCATCGCAATTGCATTCA+TGG | 0.220874 | 7_2:+80992791 | None:intergenic |
| TAAGATGTTATTCAGTAAAC+TGG | 0.242417 | 7_2:+80990403 | None:intergenic |
| CTCACCTTGGCTGGTTGAAT+TGG | 0.242710 | 7_2:-80992397 | Msa1081190:CDS |
| CATCTTGTCCACTTGAATTC+AGG | 0.267892 | 7_2:+80992364 | None:intergenic |
| ATCAAACTCTACCTCAAATA+TGG | 0.279903 | 7_2:+80990567 | None:intergenic |
| TGCATCTGTGATGACTTTCC+AGG | 0.286509 | 7_2:-80992055 | Msa1081190:CDS |
| GTGCACATATTGAATATAAC+AGG | 0.342132 | 7_2:-80994649 | Msa1081190:CDS |
| AATTAGAATTCTCCCTTCTT+GGG | 0.369748 | 7_2:+80992824 | None:intergenic |
| AGCAAATGCCAAATAGAAAA+TGG | 0.371078 | 7_2:-80990659 | Msa1081190:three_prime_UTR |
| TCACCTTGGCTGGTTGAATT+GGG | 0.383747 | 7_2:-80992396 | Msa1081190:CDS |
| GGAAATAGCGAAATGAAATT+CGG | 0.391506 | 7_2:-80994728 | Msa1081190:exon |
| AGAAAAGAAAATTACTGTAT+AGG | 0.399557 | 7_2:+80990541 | None:intergenic |
| TATTCAAGCTTAATAGAATC+TGG | 0.400747 | 7_2:+80992264 | None:intergenic |
| CATATAGGACACTTTGACTC+TGG | 0.405982 | 7_2:+80992015 | None:intergenic |
| GGTGGAGCGGGAGTGGCTAT+TGG | 0.406523 | 7_2:-80994681 | Msa1081190:CDS |
| GCGTTCATTTCATTCTTCTC+AGG | 0.408650 | 7_2:-80994969 | Msa1081190:intron |
| TTCATGTGATTTAAATGTAA+TGG | 0.410668 | 7_2:-80992310 | Msa1081190:CDS |
| TCAACTCGGAGAAGAACTTC+TGG | 0.410793 | 7_2:+80992982 | None:intergenic |
| AAGATTGACATTGACATAAC+TGG | 0.415523 | 7_2:+80994552 | None:intergenic |
| ACCTGCAGGTGGAGCGGGAG+TGG | 0.434211 | 7_2:-80994688 | Msa1081190:CDS |
| GTACGAAGTACAGTTTCGTT+AGG | 0.435687 | 7_2:+80995002 | None:intergenic |
| ATCCTATTAAGAGATATTAT+GGG | 0.437447 | 7_2:-80990378 | Msa1081190:three_prime_UTR |
| ATGAAATGAACGCAAAGTAC+AGG | 0.439123 | 7_2:+80994979 | None:intergenic |
| ATTCATACCTCTCTGCATAT+AGG | 0.445967 | 7_2:+80992000 | None:intergenic |
| AGGTACACAGTTCTGTGAAT+GGG | 0.450562 | 7_2:-80992467 | Msa1081190:CDS |
| AAAGAGACTAGCAATTTGCT+TGG | 0.452650 | 7_2:-80990436 | Msa1081190:three_prime_UTR |
| CTTCATCTTCACATTGCAAA+AGG | 0.453905 | 7_2:-80992906 | Msa1081190:CDS |
| TTCTAACATTCGGACTGCCT+TGG | 0.455919 | 7_2:+80990988 | None:intergenic |
| GACTTGCAGCTTTAAGGCCC+TGG | 0.457593 | 7_2:+80992037 | None:intergenic |
| AGAGTACCTGCAGGTGGAGC+GGG | 0.460266 | 7_2:-80994693 | Msa1081190:CDS |
| ATTGGAAAGAAAGGCTAGCT+AGG | 0.460901 | 7_2:-80990803 | Msa1081190:CDS |
| TGGCCACAACTCAATGCATA+TGG | 0.463628 | 7_2:+80992108 | None:intergenic |
| CAAGATGGTTGCGAGCTTGA+TGG | 0.464213 | 7_2:-80992348 | Msa1081190:CDS |
| GCAAAGATTATTGGAAAGAA+AGG | 0.473719 | 7_2:-80990812 | Msa1081190:CDS |
| CAGCAATCCCACTGTATATG+TGG | 0.474837 | 7_2:+80990731 | None:intergenic |
| AATTCTCCCTTCTTGGGCAA+GGG | 0.477772 | 7_2:+80992830 | None:intergenic |
| GAATTCTCCCTTCTTGGGCA+AGG | 0.478477 | 7_2:+80992829 | None:intergenic |
| TTTGGAAGTTTAAATATGAA+AGG | 0.481803 | 7_2:+80990484 | None:intergenic |
| GAAAGGCTAGCTAGGGAAAG+AGG | 0.495583 | 7_2:-80990795 | Msa1081190:CDS |
| TCGATCTGCTTATGAAAAGA+AGG | 0.497598 | 7_2:-80990964 | Msa1081190:intron |
| CAGGTACACAGTTCTGTGAA+TGG | 0.499905 | 7_2:-80992468 | Msa1081190:CDS |
| GCAGATCGAGTTCTAACATT+CGG | 0.500588 | 7_2:+80990978 | None:intergenic |
| AAAGAAGCATCAGATATTGC+AGG | 0.508685 | 7_2:-80992957 | Msa1081190:CDS |
| CCTCAAATATGGATCGTTGA+GGG | 0.510627 | 7_2:+80990578 | None:intergenic |
| GCCACTCCCGCTCCACCTGC+AGG | 0.511617 | 7_2:+80994687 | None:intergenic |
| GTACAGTTTCGTTAGGGTCA+AGG | 0.514689 | 7_2:+80995009 | None:intergenic |
| CGAGAACTTAGGGAAGTTAG+TGG | 0.517609 | 7_2:-80990603 | Msa1081190:three_prime_UTR |
| GCATCTGTGATGACTTTCCA+GGG | 0.518610 | 7_2:-80992054 | Msa1081190:CDS |
| TACGAAGTACAGTTTCGTTA+GGG | 0.522874 | 7_2:+80995003 | None:intergenic |
| CTGAATTCAAGTGGACAAGA+TGG | 0.526532 | 7_2:-80992363 | Msa1081190:CDS |
| CAAGGTTGTCGAGAAGTGAA+TGG | 0.533729 | 7_2:+80995027 | None:intergenic |
| AGGGAAGCCCTTGCCCAAGA+AGG | 0.536511 | 7_2:-80992837 | Msa1081190:CDS |
| CCCTCAACGATCCATATTTG+AGG | 0.541541 | 7_2:-80990578 | Msa1081190:three_prime_UTR |
| GTGATCAATTGAAGCAGTCA+AGG | 0.541830 | 7_2:-80990773 | Msa1081190:CDS |
| AATCCATATGCATTGAGTTG+TGG | 0.545870 | 7_2:-80992111 | Msa1081190:CDS |
| TCTAAATTGTGCAATTTGCC+TGG | 0.547347 | 7_2:-80992238 | Msa1081190:intron |
| CACATGATTTGCAGAAGAAG+TGG | 0.551647 | 7_2:+80992088 | None:intergenic |
| GGGAAGCCCTTGCCCAAGAA+GGG | 0.569563 | 7_2:-80992836 | Msa1081190:CDS |
| TCCTATTAAGAGATATTATG+GGG | 0.572665 | 7_2:-80990377 | Msa1081190:three_prime_UTR |
| TTGGAAAGAAAGGCTAGCTA+GGG | 0.575920 | 7_2:-80990802 | Msa1081190:CDS |
| ATATACAGTGGGATTGCTGT+AGG | 0.578458 | 7_2:-80990727 | Msa1081190:exon |
| TGTCAATGTCAATCTTGCCC+AGG | 0.582570 | 7_2:-80994545 | Msa1081190:intron |
| TGATGCTTCTTTCATCAACT+CGG | 0.582662 | 7_2:+80992968 | None:intergenic |
| CATAACTGGTCTTTATCATG+AGG | 0.595621 | 7_2:+80994566 | None:intergenic |
| CACATTCAAAGAGTACCTGC+AGG | 0.598684 | 7_2:-80994702 | Msa1081190:CDS |
| AAGATGTTATTCAGTAAACT+GGG | 0.600665 | 7_2:+80990404 | None:intergenic |
| GCACCCAATTCAACCAGCCA+AGG | 0.608792 | 7_2:+80992393 | None:intergenic |
| AACTGGTCTTTATCATGAGG+AGG | 0.610379 | 7_2:+80994569 | None:intergenic |
| AAGAGTACCTGCAGGTGGAG+CGG | 0.611509 | 7_2:-80994694 | Msa1081190:CDS |
| ACCTCAAATATGGATCGTTG+AGG | 0.613399 | 7_2:+80990577 | None:intergenic |
| TGAAATGAACGCAAAGTACA+GGG | 0.623520 | 7_2:+80994980 | None:intergenic |
| TGATCAATTGAAGCAGTCAA+GGG | 0.624831 | 7_2:-80990772 | Msa1081190:CDS |
| GGTACACAGTTCTGTGAATG+GGG | 0.627407 | 7_2:-80992466 | Msa1081190:CDS |
| ATGCAATCCACATATACAGT+GGG | 0.629986 | 7_2:-80990738 | Msa1081190:CDS |
| GCAGAGTGGAGTTTATTCCA+AGG | 0.631763 | 7_2:-80991005 | Msa1081190:intron |
| CCATGAATGCAATTGCGATG+AGG | 0.653723 | 7_2:-80992791 | Msa1081190:CDS |
| ATTCAAAGAGTACCTGCAGG+TGG | 0.677747 | 7_2:-80994699 | Msa1081190:CDS |
| TGCGAGCTTGATGGAGTCCG+TGG | 0.679546 | 7_2:-80992339 | Msa1081190:CDS |
| AATCACATGAAAAGTGACCA+CGG | 0.698927 | 7_2:+80992322 | None:intergenic |
| CCTATTAAGAGATATTATGG+GGG | 0.704335 | 7_2:-80990376 | Msa1081190:three_prime_UTR |
| TATGCAATCCACATATACAG+TGG | 0.705145 | 7_2:-80990739 | Msa1081190:CDS |
| AAAGTGTCCTATATGCAGAG+AGG | 0.740633 | 7_2:-80992007 | Msa1081190:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTATGTTTAAAATCAA+CGG | - | chr7_2:80990919-80990938 | Msa1081190:intron | 10.0% |
| !!! | TAAACATAGTTTAAAATTAA+TGG | + | chr7_2:80992282-80992301 | None:intergenic | 10.0% |
| !! | TAAATAAGTATAAATGAAAA+TGG | + | chr7_2:80992686-80992705 | None:intergenic | 10.0% |
| !! | TGGTTAATTAATGTTTAATT+AGG | - | chr7_2:80990630-80990649 | Msa1081190:three_prime_UTR | 15.0% |
| !! | ATTAATGTTTAATTAGGATT+TGG | - | chr7_2:80990636-80990655 | Msa1081190:three_prime_UTR | 15.0% |
| !!! | ATTTTGCTTATAATTAGTAA+CGG | + | chr7_2:80991088-80991107 | None:intergenic | 15.0% |
| !! | TTAATTGAATAAACCTAAAA+AGG | - | chr7_2:80991174-80991193 | Msa1081190:intron | 15.0% |
| !! | AATTAATTAATTGCTAGTAT+CGG | - | chr7_2:80991598-80991617 | Msa1081190:intron | 15.0% |
| !! | AATACAAAAGAACTTAAAAA+AGG | - | chr7_2:80991895-80991914 | Msa1081190:intron | 15.0% |
| !!! | AACATTTTAAAAAAGAATCA+TGG | + | chr7_2:80992010-80992029 | None:intergenic | 15.0% |
| !! | ACACATAATAATTTACTTAA+TGG | - | chr7_2:80992206-80992225 | Msa1081190:intron | 15.0% |
| !!! | ATTTTTTTTTTTTCATAGCA+TGG | + | chr7_2:80993191-80993210 | None:intergenic | 15.0% |
| !!! | AAATTTTGTGTCATTATAAA+TGG | + | chr7_2:80993428-80993447 | None:intergenic | 15.0% |
| !! | ATCATATAATGATATACTTA+TGG | + | chr7_2:80994180-80994199 | None:intergenic | 15.0% |
| !! | AGAATTGTTCAAATAAAATT+TGG | + | chr7_2:80994922-80994941 | None:intergenic | 15.0% |
| !!! | AATTTTATTTGAACAATTCT+CGG | - | chr7_2:80994922-80994941 | Msa1081190:intron | 15.0% |
| !!! | AAAAGGTAAATATTCTGAAA+GGG | + | chr7_2:80990454-80990473 | None:intergenic | 20.0% |
| !! | AAAAAGGTAAATATTCTGAA+AGG | + | chr7_2:80990455-80990474 | None:intergenic | 20.0% |
| !! | TATTCAATTAATGATGTATG+TGG | + | chr7_2:80991165-80991184 | None:intergenic | 20.0% |
| !!! | ATAAGCAAATTTTCCTTTTT+AGG | + | chr7_2:80991190-80991209 | None:intergenic | 20.0% |
| !! | TATTAACCACAAATTTATGT+CGG | + | chr7_2:80991335-80991354 | None:intergenic | 20.0% |
| !! | ACATAAATTTGTGGTTAATA+AGG | - | chr7_2:80991335-80991354 | Msa1081190:intron | 20.0% |
| !! | TATATTAGTGCAATAAGTAA+TGG | - | chr7_2:80991653-80991672 | Msa1081190:intron | 20.0% |
| !! | ATCTATTGTTTAATAACTCT+TGG | - | chr7_2:80991954-80991973 | Msa1081190:intron | 20.0% |
| !!! | AGTTTTTATTCATTAACATG+CGG | - | chr7_2:80992073-80992092 | Msa1081190:CDS | 20.0% |
| !! | TATGTTTAATCAAAATACTC+AGG | - | chr7_2:80992294-80992313 | Msa1081190:CDS | 20.0% |
| !! | TAAGTATAAATGAAAATGGA+GGG | + | chr7_2:80992682-80992701 | None:intergenic | 20.0% |
| !! | ATAAGTATAAATGAAAATGG+AGG | + | chr7_2:80992683-80992702 | None:intergenic | 20.0% |
| !!! | TATCTCATTCATTTTCATAT+GGG | + | chr7_2:80992816-80992835 | None:intergenic | 20.0% |
| !!! | TTATCTCATTCATTTTCATA+TGG | + | chr7_2:80992817-80992836 | None:intergenic | 20.0% |
| !! | TTCATGTGATTTAAATGTAA+TGG | - | chr7_2:80993075-80993094 | Msa1081190:intron | 20.0% |
| !!! | TAGTATTTTTGATAAATGCT+TGG | - | chr7_2:80993224-80993243 | Msa1081190:intron | 20.0% |
| !! | AAGGATATCTATTTACATTA+AGG | - | chr7_2:80993930-80993949 | Msa1081190:intron | 20.0% |
| !! | AAAAATAGATGTATTACAGA+AGG | + | chr7_2:80994073-80994092 | None:intergenic | 20.0% |
| !! | ATTTCGATCTCTATTAAATT+TGG | - | chr7_2:80994107-80994126 | Msa1081190:intron | 20.0% |
| !! | TTTCGATCTCTATTAAATTT+GGG | - | chr7_2:80994108-80994127 | Msa1081190:intron | 20.0% |
| !! | TATCATTATATGATTATCAC+AGG | - | chr7_2:80994186-80994205 | Msa1081190:intron | 20.0% |
| !! | ATTATGCTATAAATATCCAA+AGG | + | chr7_2:80994310-80994329 | None:intergenic | 20.0% |
| !! | GTCTTGATTATTAAAAACAA+AGG | + | chr7_2:80994342-80994361 | None:intergenic | 20.0% |
| !!! | ATGAAATGTTATTTTTGTAC+TGG | + | chr7_2:80994453-80994472 | None:intergenic | 20.0% |
| !!! | ATCAAAAACCATTTTCTATT+TGG | + | chr7_2:80994737-80994756 | None:intergenic | 20.0% |
| !! | AAAATAAAAACGAGAACTTA+GGG | - | chr7_2:80994772-80994791 | Msa1081190:intron | 20.0% |
| !! | AGAAAAGAAAATTACTGTAT+AGG | + | chr7_2:80994847-80994866 | None:intergenic | 20.0% |
| !! | TTTGGAAGTTTAAATATGAA+AGG | + | chr7_2:80994904-80994923 | None:intergenic | 20.0% |
| !! | AATCCTATTAAGAGATATTA+TGG | - | chr7_2:80995006-80995025 | Msa1081190:five_prime_UTR | 20.0% |
| !! | ATCCTATTAAGAGATATTAT+GGG | - | chr7_2:80995007-80995026 | Msa1081190:five_prime_UTR | 20.0% |
| !!! | TATTTTAGTGACAAAATATG+TGG | - | chr7_2:80995040-80995059 | Msa1081190:five_prime_UTR | 20.0% |
| !!! | ATTTTCGAACACTGATTTAT+TGG | - | chr7_2:80990610-80990629 | Msa1081190:three_prime_UTR | 25.0% |
| ! | TCAATATTGATATATTCCCT+GGG | + | chr7_2:80991222-80991241 | None:intergenic | 25.0% |
| ! | TTCAATATTGATATATTCCC+TGG | + | chr7_2:80991223-80991242 | None:intergenic | 25.0% |
| ! | AATTAATTATTCCATAACCC+TGG | + | chr7_2:80991586-80991605 | None:intergenic | 25.0% |
| ! | AGTATAATGAGAATAAGACT+TGG | - | chr7_2:80991696-80991715 | Msa1081190:intron | 25.0% |
| ! | GTATAATGAGAATAAGACTT+GGG | - | chr7_2:80991697-80991716 | Msa1081190:intron | 25.0% |
| ! | TGCTTAAAATAAGCCTAAAA+TGG | - | chr7_2:80991728-80991747 | Msa1081190:intron | 25.0% |
| ! | TAAAATAAGCCTAAAATGGT+TGG | - | chr7_2:80991732-80991751 | Msa1081190:intron | 25.0% |
| !! | GTGTATGGAAAAAATCTTTT+TGG | - | chr7_2:80992164-80992183 | Msa1081190:intron | 25.0% |
| ! | AAATTAATGGCAATTCACAA+AGG | + | chr7_2:80992269-80992288 | None:intergenic | 25.0% |
| !!! | AGTCTTTTTAATTAACCAGA+AGG | - | chr7_2:80992327-80992346 | Msa1081190:CDS | 25.0% |
| ! | AAGTATAAATGAAAATGGAG+GGG | + | chr7_2:80992681-80992700 | None:intergenic | 25.0% |
| ! | ACGATCTATAATGAATACAA+GGG | - | chr7_2:80992770-80992789 | Msa1081190:CDS | 25.0% |
| ! | TGAAAATGAATGAGATAACA+AGG | - | chr7_2:80992819-80992838 | Msa1081190:CDS | 25.0% |
| !!! | ATCCTTTGTTATTTTACTAC+AGG | - | chr7_2:80992898-80992917 | Msa1081190:CDS | 25.0% |
| ! | TACCTGTAGTAAAATAACAA+AGG | + | chr7_2:80992903-80992922 | None:intergenic | 25.0% |
| ! | TATTCAAGCTTAATAGAATC+TGG | + | chr7_2:80993124-80993143 | None:intergenic | 25.0% |
| ! | AATTGACCCCATTTAAAAAT+CGG | + | chr7_2:80993602-80993621 | None:intergenic | 25.0% |
| ! | CTTCAATTGTGTAATCAAAT+AGG | - | chr7_2:80993767-80993786 | Msa1081190:intron | 25.0% |
| ! | TATGTAGATAATCTCTTAGA+AGG | - | chr7_2:80993911-80993930 | Msa1081190:intron | 25.0% |
| ! | TATCTATTTACATTAAGGAG+AGG | - | chr7_2:80993935-80993954 | Msa1081190:intron | 25.0% |
| ! | ATCTATTTACATTAAGGAGA+GGG | - | chr7_2:80993936-80993955 | Msa1081190:intron | 25.0% |
| ! | ACATCAATGAAATTCAAGAT+AGG | + | chr7_2:80994220-80994239 | None:intergenic | 25.0% |
| ! | TATCTTGAATTTCATTGATG+TGG | - | chr7_2:80994219-80994238 | Msa1081190:intron | 25.0% |
| ! | TAAATATCCAAAGGTTAACT+AGG | + | chr7_2:80994301-80994320 | None:intergenic | 25.0% |
| !!! | TAGGTTTTGTTGTTATGATT+TGG | - | chr7_2:80994677-80994696 | Msa1081190:CDS | 25.0% |
| !! | TTTTTGATCAAAGAGAGAAA+CGG | - | chr7_2:80994749-80994768 | Msa1081190:intron | 25.0% |
| ! | GAAAATAAAAACGAGAACTT+AGG | - | chr7_2:80994771-80994790 | Msa1081190:intron | 25.0% |
| !! | TAATTTTCTTTTCTCTCTCT+TGG | - | chr7_2:80994853-80994872 | Msa1081190:intron | 25.0% |
| ! | AAGATGTTATTCAGTAAACT+GGG | + | chr7_2:80994984-80995003 | None:intergenic | 25.0% |
| ! | TAAGATGTTATTCAGTAAAC+TGG | + | chr7_2:80994985-80995004 | None:intergenic | 25.0% |
| ! | TCCTATTAAGAGATATTATG+GGG | - | chr7_2:80995008-80995027 | Msa1081190:five_prime_UTR | 25.0% |
| GGATGAAATGAATAGGAAAA+AGG | + | chr7_2:80990471-80990490 | None:intergenic | 30.0% | |
| GTAAAAATGAAAAAACGACG+AGG | + | chr7_2:80990495-80990514 | None:intergenic | 30.0% | |
| GGAAATAGCGAAATGAAATT+CGG | - | chr7_2:80990657-80990676 | Msa1081190:three_prime_UTR | 30.0% | |
| GTGCACATATTGAATATAAC+AGG | - | chr7_2:80990736-80990755 | Msa1081190:CDS | 30.0% | |
| AAGATTGACATTGACATAAC+TGG | + | chr7_2:80990836-80990855 | None:intergenic | 30.0% | |
| ! | TGCTTATAATTAGTAACGGA+GGG | + | chr7_2:80991084-80991103 | None:intergenic | 30.0% |
| TTGCTTATAATTAGTAACGG+AGG | + | chr7_2:80991085-80991104 | None:intergenic | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | chr7_2:80991153-80991172 | None:intergenic | 30.0% | |
| TTGCTTATAATTAGAAACCC+AGG | - | chr7_2:80991202-80991221 | Msa1081190:intron | 30.0% | |
| TGCTTATAATTAGAAACCCA+GGG | - | chr7_2:80991203-80991222 | Msa1081190:intron | 30.0% | |
| ! | AAATCTGTGTTGATCAAGTT+CGG | + | chr7_2:80991264-80991283 | None:intergenic | 30.0% |
| ACATCATTAACAACGATTTC+AGG | - | chr7_2:80991286-80991305 | Msa1081190:intron | 30.0% | |
| GGTTAATAAGGTTTCATAGA+TGG | - | chr7_2:80991347-80991366 | Msa1081190:intron | 30.0% | |
| ! | AGCTAATGAAGTGTTAGATT+TGG | + | chr7_2:80991392-80991411 | None:intergenic | 30.0% |
| ! | ATTATTATGTGCCCTTTTTC+CGG | - | chr7_2:80991497-80991516 | Msa1081190:intron | 30.0% |
| AGGTTCCTATTTAATGTTCA+TGG | - | chr7_2:80991532-80991551 | Msa1081190:intron | 30.0% | |
| GGTTCCTATTTAATGTTCAT+GGG | - | chr7_2:80991533-80991552 | Msa1081190:intron | 30.0% | |
| TGATGAAAATTCTACAACGA+CGG | + | chr7_2:80991777-80991796 | None:intergenic | 30.0% | |
| ATGAAAGTTTCCTATGTAGA+TGG | - | chr7_2:80991797-80991816 | Msa1081190:intron | 30.0% | |
| ! | CAAAACTCCTTTTAAACTTG+TGG | - | chr7_2:80991859-80991878 | Msa1081190:intron | 30.0% |
| TGAACATCCACAAGTTTAAA+AGG | + | chr7_2:80991869-80991888 | None:intergenic | 30.0% | |
| TTTAAACTTGTGGATGTTCA+TGG | - | chr7_2:80991869-80991888 | Msa1081190:intron | 30.0% | |
| CTTAAAAAAGGATTGAGATG+CGG | - | chr7_2:80991907-80991926 | Msa1081190:intron | 30.0% | |
| !! | TACTCTCAGCTTTAAGTAAT+AGG | + | chr7_2:80992054-80992073 | None:intergenic | 30.0% |
| TTATTCATTAACATGCGGTT+AGG | - | chr7_2:80992078-80992097 | Msa1081190:CDS | 30.0% | |
| !!! | CCAGTGTTTTAAAAATGACA+GGG | - | chr7_2:80992529-80992548 | Msa1081190:intron | 30.0% |
| AATTAGAATTCTCCCTTCTT+GGG | + | chr7_2:80992564-80992583 | None:intergenic | 30.0% | |
| AGTATAAATGAAAATGGAGG+GGG | + | chr7_2:80992680-80992699 | None:intergenic | 30.0% | |
| CACGATCTATAATGAATACA+AGG | - | chr7_2:80992769-80992788 | Msa1081190:CDS | 30.0% | |
| !!! | TTTTTTTTCATAGCATGGCA+TGG | + | chr7_2:80993186-80993205 | None:intergenic | 30.0% |
| ATACCATCCTTAAAACAGAA+AGG | + | chr7_2:80993507-80993526 | None:intergenic | 30.0% | |
| !!! | TACCTCACCGATTTTTAAAT+GGG | - | chr7_2:80993592-80993611 | Msa1081190:intron | 30.0% |
| TTGCTTAAAATTAGAGTAGC+AGG | + | chr7_2:80993696-80993715 | None:intergenic | 30.0% | |
| !! | AACAAAGAGTATCTCTAATG+AGG | + | chr7_2:80993826-80993845 | None:intergenic | 30.0% |
| CATTAGAGATACTCTTTGTT+AGG | - | chr7_2:80993826-80993845 | Msa1081190:intron | 30.0% | |
| TCTATTTACATTAAGGAGAG+GGG | - | chr7_2:80993937-80993956 | Msa1081190:intron | 30.0% | |
| AGGGAAATATCTATTCTCTA+AGG | - | chr7_2:80994017-80994036 | Msa1081190:intron | 30.0% | |
| TAATGTTGTGTCCATGATAA+AGG | + | chr7_2:80994268-80994287 | None:intergenic | 30.0% | |
| CATTTATCCTAGTTAACCTT+TGG | - | chr7_2:80994291-80994310 | Msa1081190:intron | 30.0% | |
| CACTCTGCATAAAAAAATGA+TGG | + | chr7_2:80994368-80994387 | None:intergenic | 30.0% | |
| !!! | CATCATTTTTTTATGCAGAG+TGG | - | chr7_2:80994366-80994385 | Msa1081190:intron | 30.0% |
| ! | AGCTACTTTCAATATTTCTC+AGG | - | chr7_2:80994549-80994568 | Msa1081190:CDS | 30.0% |
| GCAAAGATTATTGGAAAGAA+AGG | - | chr7_2:80994573-80994592 | Msa1081190:CDS | 30.0% | |
| CTCCTACAAAAATGTTTCAA+CGG | + | chr7_2:80994703-80994722 | None:intergenic | 30.0% | |
| AGCAAATGCCAAATAGAAAA+TGG | - | chr7_2:80994726-80994745 | Msa1081190:exon | 30.0% | |
| ATCAAACTCTACCTCAAATA+TGG | + | chr7_2:80994821-80994840 | None:intergenic | 30.0% | |
| CCTATTAAGAGATATTATGG+GGG | - | chr7_2:80995009-80995028 | Msa1081190:five_prime_UTR | 30.0% | |
| TACGAAGTACAGTTTCGTTA+GGG | + | chr7_2:80990385-80990404 | None:intergenic | 35.0% | |
| TGAAATGAACGCAAAGTACA+GGG | + | chr7_2:80990408-80990427 | None:intergenic | 35.0% | |
| ATGAAATGAACGCAAAGTAC+AGG | + | chr7_2:80990409-80990428 | None:intergenic | 35.0% | |
| AAAATGAAAAAACGACGAGG+AGG | + | chr7_2:80990492-80990511 | None:intergenic | 35.0% | |
| !! | CATAACTGGTCTTTATCATG+AGG | + | chr7_2:80990822-80990841 | None:intergenic | 35.0% |
| ACATAAAGCGTAAAACAGAC+AGG | + | chr7_2:80990871-80990890 | None:intergenic | 35.0% | |
| GATGTAAGCTTTCATTTGAG+TGG | - | chr7_2:80990966-80990985 | Msa1081190:CDS | 35.0% | |
| GGTTCTTACAGAAATGTCAT+TGG | - | chr7_2:80991001-80991020 | Msa1081190:CDS | 35.0% | |
| ! | CTTATAATTAGTAACGGAGG+GGG | + | chr7_2:80991082-80991101 | None:intergenic | 35.0% |
| ! | GCTTATAATTAGTAACGGAG+GGG | + | chr7_2:80991083-80991102 | None:intergenic | 35.0% |
| !! | AAGTTCGGTTGATGGTTAAT+GGG | + | chr7_2:80991249-80991268 | None:intergenic | 35.0% |
| GTTAAGCCGACATAAATTTG+TGG | - | chr7_2:80991326-80991345 | Msa1081190:intron | 35.0% | |
| ATTAGCTAATCCCACTTAGT+GGG | - | chr7_2:80991405-80991424 | Msa1081190:intron | 35.0% | |
| GAGAATAAGACTTGGGAATT+AGG | - | chr7_2:80991704-80991723 | Msa1081190:intron | 35.0% | |
| AATAAGCCTAAAATGGTTGG+TGG | - | chr7_2:80991735-80991754 | Msa1081190:intron | 35.0% | |
| ATAAGCCTAAAATGGTTGGT+GGG | - | chr7_2:80991736-80991755 | Msa1081190:intron | 35.0% | |
| AAGAAGAGAACCATCTACAT+AGG | + | chr7_2:80991810-80991829 | None:intergenic | 35.0% | |
| TGATGCTTCTTTCATCAACT+CGG | + | chr7_2:80992420-80992439 | None:intergenic | 35.0% | |
| !! | AAAGAAGCATCAGATATTGC+AGG | - | chr7_2:80992428-80992447 | Msa1081190:CDS | 35.0% |
| ! | CTTTTGCAATGTGAAGATGA+AGG | + | chr7_2:80992481-80992500 | None:intergenic | 35.0% |
| CTTCATCTTCACATTGCAAA+AGG | - | chr7_2:80992479-80992498 | Msa1081190:intron | 35.0% | |
| !!! | GCCAGTGTTTTAAAAATGAC+AGG | - | chr7_2:80992528-80992547 | Msa1081190:intron | 35.0% |
| !!! | CCCTGTCATTTTTAAAACAC+TGG | + | chr7_2:80992532-80992551 | None:intergenic | 35.0% |
| CAATTAGAATTCTCCCTTCT+TGG | + | chr7_2:80992565-80992584 | None:intergenic | 35.0% | |
| ! | TTGAACTTTTACACTCACCT+TGG | - | chr7_2:80992975-80992994 | Msa1081190:CDS | 35.0% |
| ! | GCTTTTTACCTGAATTCAAG+TGG | - | chr7_2:80993013-80993032 | Msa1081190:intron | 35.0% |
| AATCACATGAAAAGTGACCA+CGG | + | chr7_2:80993066-80993085 | None:intergenic | 35.0% | |
| TCTAAATTGTGCAATTTGCC+TGG | - | chr7_2:80993147-80993166 | Msa1081190:intron | 35.0% | |
| ! | AATCCATATGCATTGAGTTG+TGG | - | chr7_2:80993274-80993293 | Msa1081190:intron | 35.0% |
| ATTCATACCTCTCTGCATAT+AGG | + | chr7_2:80993388-80993407 | None:intergenic | 35.0% | |
| TCACTCTAGATATCAATCAC+CGG | - | chr7_2:80993541-80993560 | Msa1081190:intron | 35.0% | |
| !!! | GTACCTCACCGATTTTTAAA+TGG | - | chr7_2:80993591-80993610 | Msa1081190:intron | 35.0% |
| !!! | ACCTCACCGATTTTTAAATG+GGG | - | chr7_2:80993593-80993612 | Msa1081190:intron | 35.0% |
| TTAAACTTCTTCAAACCGAC+TGG | + | chr7_2:80993629-80993648 | None:intergenic | 35.0% | |
| AAGCAACTCTTGCTTGTATA+AGG | - | chr7_2:80993710-80993729 | Msa1081190:intron | 35.0% | |
| ACAATTGAAGTTTGTGCATG+AGG | + | chr7_2:80993757-80993776 | None:intergenic | 35.0% | |
| GCATTCAATAACAGTTTGAC+TGG | - | chr7_2:80993973-80993992 | Msa1081190:intron | 35.0% | |
| AACAGTTTGACTGGAATCTT+CGG | - | chr7_2:80993982-80994001 | Msa1081190:intron | 35.0% | |
| TTTCATTGATGTGGCTGTTA+TGG | - | chr7_2:80994228-80994247 | Msa1081190:intron | 35.0% | |
| TCGATCTGCTTATGAAAAGA+AGG | - | chr7_2:80994421-80994440 | Msa1081190:intron | 35.0% | |
| ATGTGCATACATGAATGCTA+TGG | + | chr7_2:80994517-80994536 | None:intergenic | 35.0% | |
| TTCTCAGGTGCAAAGATTAT+TGG | - | chr7_2:80994564-80994583 | Msa1081190:CDS | 35.0% | |
| TGATCAATTGAAGCAGTCAA+GGG | - | chr7_2:80994613-80994632 | Msa1081190:CDS | 35.0% | |
| TATGCAATCCACATATACAG+TGG | - | chr7_2:80994646-80994665 | Msa1081190:CDS | 35.0% | |
| ATGCAATCCACATATACAGT+GGG | - | chr7_2:80994647-80994666 | Msa1081190:CDS | 35.0% | |
| ! | AAAGAGACTAGCAATTTGCT+TGG | - | chr7_2:80994949-80994968 | Msa1081190:intron | 35.0% |
| CCCCCATAATATCTCTTAAT+AGG | + | chr7_2:80995012-80995031 | None:intergenic | 35.0% | |
| GTACGAAGTACAGTTTCGTT+AGG | + | chr7_2:80990386-80990405 | None:intergenic | 40.0% | |
| GCGTTCATTTCATTCTTCTC+AGG | - | chr7_2:80990416-80990435 | Msa1081190:three_prime_UTR | 40.0% | |
| ACGAGGAGGATGAAATGAAT+AGG | + | chr7_2:80990478-80990497 | None:intergenic | 40.0% | |
| GATCTCATACATGTGATGTG+AGG | - | chr7_2:80990555-80990574 | Msa1081190:three_prime_UTR | 40.0% | |
| !! | AACTGGTCTTTATCATGAGG+AGG | + | chr7_2:80990819-80990838 | None:intergenic | 40.0% |
| AAAACAGACAGGACATACCT+GGG | + | chr7_2:80990860-80990879 | None:intergenic | 40.0% | |
| TAAAACAGACAGGACATACC+TGG | + | chr7_2:80990861-80990880 | None:intergenic | 40.0% | |
| TTCGCACACGAGTAGTTTAA+TGG | - | chr7_2:80991053-80991072 | Msa1081190:intron | 40.0% | |
| !! | CAAGTTCGGTTGATGGTTAA+TGG | + | chr7_2:80991250-80991269 | None:intergenic | 40.0% |
| TGTTGATCAAGTTCGGTTGA+TGG | + | chr7_2:80991257-80991276 | None:intergenic | 40.0% | |
| CATTAGCTAATCCCACTTAG+TGG | - | chr7_2:80991404-80991423 | Msa1081190:intron | 40.0% | |
| TAATCCCACTTAGTGGGATA+AGG | - | chr7_2:80991411-80991430 | Msa1081190:intron | 40.0% | |
| CGGTCCCATGAACATTAAAT+AGG | + | chr7_2:80991540-80991559 | None:intergenic | 40.0% | |
| ! | TAAGCCTAAAATGGTTGGTG+GGG | - | chr7_2:80991737-80991756 | Msa1081190:intron | 40.0% |
| ATAGGCACTATGTGTCAGTT+TGG | + | chr7_2:80992036-80992055 | None:intergenic | 40.0% | |
| CGATCTTTGACTCTTGTGTA+TGG | - | chr7_2:80992149-80992168 | Msa1081190:intron | 40.0% | |
| ! | ACTTAATGGTTTGCCGTCTT+CGG | - | chr7_2:80992220-80992239 | Msa1081190:intron | 40.0% |
| TTGCAAAGAATGTCCGAAGA+CGG | + | chr7_2:80992236-80992255 | None:intergenic | 40.0% | |
| ACTGCATAAAGTGAACCTTC+TGG | + | chr7_2:80992345-80992364 | None:intergenic | 40.0% | |
| AGGTACACAGTTCTGTGAAT+GGG | - | chr7_2:80992918-80992937 | Msa1081190:CDS | 40.0% | |
| CATCTTGTCCACTTGAATTC+AGG | + | chr7_2:80993024-80993043 | None:intergenic | 40.0% | |
| CTGAATTCAAGTGGACAAGA+TGG | - | chr7_2:80993022-80993041 | Msa1081190:intron | 40.0% | |
| CATGGAAATAGGATCTTACC+AGG | + | chr7_2:80993168-80993187 | None:intergenic | 40.0% | |
| TCATAGCATGGCATGGAAAT+AGG | + | chr7_2:80993179-80993198 | None:intergenic | 40.0% | |
| TAAATGCTTGGCCTGTGATA+CGG | - | chr7_2:80993236-80993255 | Msa1081190:intron | 40.0% | |
| ACAAAATCCTACCGTATCAC+AGG | + | chr7_2:80993250-80993269 | None:intergenic | 40.0% | |
| ! | CACATGATTTGCAGAAGAAG+TGG | + | chr7_2:80993300-80993319 | None:intergenic | 40.0% |
| CATATAGGACACTTTGACTC+TGG | + | chr7_2:80993373-80993392 | None:intergenic | 40.0% | |
| ! | AAAGTGTCCTATATGCAGAG+AGG | - | chr7_2:80993378-80993397 | Msa1081190:intron | 40.0% |
| TACTAGTTCAGTTGTGCATC+TGG | - | chr7_2:80993447-80993466 | Msa1081190:intron | 40.0% | |
| CATCTGGACAGAAATGTGTT+TGG | - | chr7_2:80993463-80993482 | Msa1081190:intron | 40.0% | |
| !! | GACAGAAATGTGTTTGGTGT+AGG | - | chr7_2:80993469-80993488 | Msa1081190:intron | 40.0% |
| ! | TGGTCAGCCTTTCTGTTTTA+AGG | - | chr7_2:80993497-80993516 | Msa1081190:intron | 40.0% |
| !!! | CAGCCTTTCTGTTTTAAGGA+TGG | - | chr7_2:80993501-80993520 | Msa1081190:intron | 40.0% |
| ! | GGTGATTGATATCTAGAGTG+AGG | + | chr7_2:80993542-80993561 | None:intergenic | 40.0% |
| ACCCCATTTAAAAATCGGTG+AGG | + | chr7_2:80993597-80993616 | None:intergenic | 40.0% | |
| !! | AGAAGGAGAGAGTTGATAGT+TGG | + | chr7_2:80993661-80993680 | None:intergenic | 40.0% |
| !! | CTCTAATGAGGTGTCGTATT+GGG | + | chr7_2:80993814-80993833 | None:intergenic | 40.0% |
| !! | TCTCTAATGAGGTGTCGTAT+TGG | + | chr7_2:80993815-80993834 | None:intergenic | 40.0% |
| GATACTCTTTGTTAGGCATC+AGG | - | chr7_2:80993833-80993852 | Msa1081190:intron | 40.0% | |
| CTTTGTTAGGCATCAGGTTT+AGG | - | chr7_2:80993839-80993858 | Msa1081190:intron | 40.0% | |
| TTAGGCCTTAGACCAACAAA+TGG | - | chr7_2:80993857-80993876 | Msa1081190:intron | 40.0% | |
| TAGGCCTTAGACCAACAAAT+GGG | - | chr7_2:80993858-80993877 | Msa1081190:intron | 40.0% | |
| ! | TATGATTATCACAGGCGTTG+TGG | - | chr7_2:80994194-80994213 | Msa1081190:intron | 40.0% |
| GATGTGGCTGTTATGGAATT+CGG | - | chr7_2:80994235-80994254 | Msa1081190:intron | 40.0% | |
| ATGTGGCTGTTATGGAATTC+GGG | - | chr7_2:80994236-80994255 | Msa1081190:intron | 40.0% | |
| TCGGGTAATGTCCTTTATCA+TGG | - | chr7_2:80994254-80994273 | Msa1081190:intron | 40.0% | |
| ! | GCAGATCGAGTTCTAACATT+CGG | + | chr7_2:80994410-80994429 | None:intergenic | 40.0% |
| ! | ATTGGAAAGAAAGGCTAGCT+AGG | - | chr7_2:80994582-80994601 | Msa1081190:CDS | 40.0% |
| ! | TTGGAAAGAAAGGCTAGCTA+GGG | - | chr7_2:80994583-80994602 | Msa1081190:CDS | 40.0% |
| GTGATCAATTGAAGCAGTCA+AGG | - | chr7_2:80994612-80994631 | Msa1081190:CDS | 40.0% | |
| ! | TGAAGCAGTCAAGGGAATTT+TGG | - | chr7_2:80994621-80994640 | Msa1081190:CDS | 40.0% |
| ATATACAGTGGGATTGCTGT+AGG | - | chr7_2:80994658-80994677 | Msa1081190:CDS | 40.0% | |
| ! | GGCCGTTGAAACATTTTTGT+AGG | - | chr7_2:80994698-80994717 | Msa1081190:CDS | 40.0% |
| CCTCAAATATGGATCGTTGA+GGG | + | chr7_2:80994810-80994829 | None:intergenic | 40.0% | |
| ACCTCAAATATGGATCGTTG+AGG | + | chr7_2:80994811-80994830 | None:intergenic | 40.0% | |
| CAAGGTTGTCGAGAAGTGAA+TGG | + | chr7_2:80990361-80990380 | None:intergenic | 45.0% | |
| GTACAGTTTCGTTAGGGTCA+AGG | + | chr7_2:80990379-80990398 | None:intergenic | 45.0% | |
| !! | CACATTCAAAGAGTACCTGC+AGG | - | chr7_2:80990683-80990702 | Msa1081190:three_prime_UTR | 45.0% |
| !! | ATTCAAAGAGTACCTGCAGG+TGG | - | chr7_2:80990686-80990705 | Msa1081190:three_prime_UTR | 45.0% |
| TGTCAATGTCAATCTTGCCC+AGG | - | chr7_2:80990840-80990859 | Msa1081190:intron | 45.0% | |
| TTTGAGTGGACGATTCAACG+TGG | - | chr7_2:80990980-80990999 | Msa1081190:CDS | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7_2:80991418-80991437 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | + | chr7_2:80991419-80991438 | None:intergenic | 45.0% |
| ! | TTATGTGCCCTTTTTCCGGA+TGG | - | chr7_2:80991501-80991520 | Msa1081190:intron | 45.0% |
| CACCTTACCATCCGGAAAAA+GGG | + | chr7_2:80991511-80991530 | None:intergenic | 45.0% | |
| TAATGTTCATGGGACCGAAC+CGG | - | chr7_2:80991543-80991562 | Msa1081190:intron | 45.0% | |
| ATTATTCCATAACCCTGGCC+AGG | + | chr7_2:80991581-80991600 | None:intergenic | 45.0% | |
| CCTCTAACCAGTCTTGCTTA+AGG | + | chr7_2:80992127-80992146 | None:intergenic | 45.0% | |
| ! | CCTTAAGCAAGACTGGTTAG+AGG | - | chr7_2:80992124-80992143 | Msa1081190:CDS | 45.0% |
| ATGGCAATTCACAAAGGCTC+TGG | + | chr7_2:80992263-80992282 | None:intergenic | 45.0% | |
| TCAACTCGGAGAAGAACTTC+TGG | + | chr7_2:80992406-80992425 | None:intergenic | 45.0% | |
| AATTCTCCCTTCTTGGGCAA+GGG | + | chr7_2:80992558-80992577 | None:intergenic | 45.0% | |
| CCTCATCGCAATTGCATTCA+TGG | + | chr7_2:80992597-80992616 | None:intergenic | 45.0% | |
| CCATGAATGCAATTGCGATG+AGG | - | chr7_2:80992594-80992613 | Msa1081190:intron | 45.0% | |
| CAGGTACACAGTTCTGTGAA+TGG | - | chr7_2:80992917-80992936 | Msa1081190:CDS | 45.0% | |
| GGTACACAGTTCTGTGAATG+GGG | - | chr7_2:80992919-80992938 | Msa1081190:CDS | 45.0% | |
| ! | ACTTTTACACTCACCTTGGC+TGG | - | chr7_2:80992979-80992998 | Msa1081190:CDS | 45.0% |
| ! | TCACCTTGGCTGGTTGAATT+GGG | - | chr7_2:80992989-80993008 | Msa1081190:CDS | 45.0% |
| TGGCCACAACTCAATGCATA+TGG | + | chr7_2:80993280-80993299 | None:intergenic | 45.0% | |
| TGCATCTGTGATGACTTTCC+AGG | - | chr7_2:80993330-80993349 | Msa1081190:intron | 45.0% | |
| GCATCTGTGATGACTTTCCA+GGG | - | chr7_2:80993331-80993350 | Msa1081190:intron | 45.0% | |
| ACTCTGGACTTGCAGCTTTA+AGG | + | chr7_2:80993357-80993376 | None:intergenic | 45.0% | |
| !! | GAAATGTGTTTGGTGTAGGC+TGG | - | chr7_2:80993473-80993492 | Msa1081190:intron | 45.0% |
| ! | ATATCTAGAGTGAGGCAGAC+GGG | + | chr7_2:80993534-80993553 | None:intergenic | 45.0% |
| ! | GATATCTAGAGTGAGGCAGA+CGG | + | chr7_2:80993535-80993554 | None:intergenic | 45.0% |
| AGAGTAGCAGGCTTAAGAGA+GGG | + | chr7_2:80993684-80993703 | None:intergenic | 45.0% | |
| TAGAGTAGCAGGCTTAAGAG+AGG | + | chr7_2:80993685-80993704 | None:intergenic | 45.0% | |
| ! | TTGGCCCATTTGTTGGTCTA+AGG | + | chr7_2:80993865-80993884 | None:intergenic | 45.0% |
| AGACCAACAAATGGGCCAAA+TGG | - | chr7_2:80993866-80993885 | Msa1081190:intron | 45.0% | |
| TCTCCATTTGGCCCATTTGT+TGG | + | chr7_2:80993872-80993891 | None:intergenic | 45.0% | |
| TGTAGCCAACACTCTCCATT+TGG | + | chr7_2:80993884-80993903 | None:intergenic | 45.0% | |
| ! | CTTTTGCTCTGCTGATACAG+TGG | - | chr7_2:80994042-80994061 | Msa1081190:intron | 45.0% |
| GCACATTAACTACGAGCGAT+AGG | + | chr7_2:80994136-80994155 | None:intergenic | 45.0% | |
| GCAGAGTGGAGTTTATTCCA+AGG | - | chr7_2:80994380-80994399 | Msa1081190:intron | 45.0% | |
| TTCTAACATTCGGACTGCCT+TGG | + | chr7_2:80994400-80994419 | None:intergenic | 45.0% | |
| CAGCAATCCCACTGTATATG+TGG | + | chr7_2:80994657-80994676 | None:intergenic | 45.0% | |
| CGAGAACTTAGGGAAGTTAG+TGG | - | chr7_2:80994782-80994801 | Msa1081190:intron | 45.0% | |
| CCCTCAACGATCCATATTTG+AGG | - | chr7_2:80994807-80994826 | Msa1081190:intron | 45.0% | |
| ! | TGCCCTTTTTCCGGATGGTA+AGG | - | chr7_2:80991506-80991525 | Msa1081190:intron | 50.0% |
| GCACCTTACCATCCGGAAAA+AGG | + | chr7_2:80991512-80991531 | None:intergenic | 50.0% | |
| ! | TTTTCCGGATGGTAAGGTGC+AGG | - | chr7_2:80991512-80991531 | Msa1081190:intron | 50.0% |
| AATGTTCATGGGACCGAACC+GGG | - | chr7_2:80991544-80991563 | Msa1081190:intron | 50.0% | |
| ! | CTCACCCCACCAACCATTTT+AGG | + | chr7_2:80991744-80991763 | None:intergenic | 50.0% |
| TTCTGGTCGCATACTGCAAG+TGG | + | chr7_2:80992389-80992408 | None:intergenic | 50.0% | |
| GAATTCTCCCTTCTTGGGCA+AGG | + | chr7_2:80992559-80992578 | None:intergenic | 50.0% | |
| ! | CTCACCTTGGCTGGTTGAAT+TGG | - | chr7_2:80992988-80993007 | Msa1081190:CDS | 50.0% |
| CAAGATGGTTGCGAGCTTGA+TGG | - | chr7_2:80993037-80993056 | Msa1081190:intron | 50.0% | |
| !! | TGTGTTTGGTGTAGGCTGGT+TGG | - | chr7_2:80993477-80993496 | Msa1081190:intron | 50.0% |
| ! | TATCTAGAGTGAGGCAGACG+GGG | + | chr7_2:80993533-80993552 | None:intergenic | 50.0% |
| TCCCCAACCACGACTACAAT+CGG | - | chr7_2:80993567-80993586 | Msa1081190:intron | 50.0% | |
| TCCGATTGTAGTCGTGGTTG+GGG | + | chr7_2:80993571-80993590 | None:intergenic | 50.0% | |
| CTCCGATTGTAGTCGTGGTT+GGG | + | chr7_2:80993572-80993591 | None:intergenic | 50.0% | |
| ACTCCGATTGTAGTCGTGGT+TGG | + | chr7_2:80993573-80993592 | None:intergenic | 50.0% | |
| AGGTACTCCGATTGTAGTCG+TGG | + | chr7_2:80993577-80993596 | None:intergenic | 50.0% | |
| TGGGGTCAATTCTTGCCAGT+CGG | - | chr7_2:80993611-80993630 | Msa1081190:intron | 50.0% | |
| GCATGAGGCTGACACTTGTA+AGG | + | chr7_2:80993742-80993761 | None:intergenic | 50.0% | |
| ! | ATGGGCCAAATGGAGAGTGT+TGG | - | chr7_2:80993876-80993895 | Msa1081190:intron | 50.0% |
| !! | ATCTTCGGTGTTGAGCAGTG+AGG | - | chr7_2:80993997-80994016 | Msa1081190:intron | 50.0% |
| !! | TCTTCGGTGTTGAGCAGTGA+GGG | - | chr7_2:80993998-80994017 | Msa1081190:intron | 50.0% |
| ! | GAAAGGCTAGCTAGGGAAAG+AGG | - | chr7_2:80994590-80994609 | Msa1081190:CDS | 50.0% |
| !! | AAGAGTACCTGCAGGTGGAG+CGG | - | chr7_2:80990691-80990710 | Msa1081190:three_prime_UTR | 55.0% |
| ! | CGTGTGCGAACTGTGTTGAC+AGG | + | chr7_2:80991043-80991062 | None:intergenic | 55.0% |
| GGAACCTGCACCTTACCATC+CGG | + | chr7_2:80991519-80991538 | None:intergenic | 55.0% | |
| TTCCTTCCTGGCCAGGGTTA+TGG | - | chr7_2:80991572-80991591 | Msa1081190:intron | 55.0% | |
| TTCCATAACCCTGGCCAGGA+AGG | + | chr7_2:80991577-80991596 | None:intergenic | 55.0% | |
| TAACATGCGGTTAGGCCGAG+TGG | - | chr7_2:80992086-80992105 | Msa1081190:CDS | 55.0% | |
| !! | AGGCCGAGTGGTAATGGACT+CGG | - | chr7_2:80992098-80992117 | Msa1081190:CDS | 55.0% |
| TGCCCGAGTCCATTACCACT+CGG | + | chr7_2:80992104-80992123 | None:intergenic | 55.0% | |
| TCGGGCACCTTAAGCAAGAC+TGG | - | chr7_2:80992117-80992136 | Msa1081190:CDS | 55.0% | |
| GCACCCAATTCAACCAGCCA+AGG | + | chr7_2:80992995-80993014 | None:intergenic | 55.0% | |
| TGCTTGGCCTGTGATACGGT+AGG | - | chr7_2:80993240-80993259 | Msa1081190:intron | 55.0% | |
| !! | GACTTGCAGCTTTAAGGCCC+TGG | + | chr7_2:80993351-80993370 | None:intergenic | 55.0% |
| TAGTCGTGGTTGGGGATCTC+CGG | + | chr7_2:80993563-80993582 | None:intergenic | 55.0% | |
| GCAGGCTTAAGAGAGGGAGA+AGG | + | chr7_2:80993678-80993697 | None:intergenic | 55.0% | |
| AGGAGAGGGGTAGCAAGTTG+AGG | - | chr7_2:80993950-80993969 | Msa1081190:intron | 55.0% | |
| ! | GGAGAGGGGTAGCAAGTTGA+GGG | - | chr7_2:80993951-80993970 | Msa1081190:intron | 55.0% |
| ! | AGAGTACCTGCAGGTGGAGC+GGG | - | chr7_2:80990692-80990711 | Msa1081190:three_prime_UTR | 60.0% |
| GGAAGGAACCAGTCCCGGTT+CGG | + | chr7_2:80991560-80991579 | None:intergenic | 60.0% | |
| !! | AACCGGGACTGGTTCCTTCC+TGG | - | chr7_2:80991560-80991579 | Msa1081190:intron | 60.0% |
| ! | GACTGGTTCCTTCCTGGCCA+GGG | - | chr7_2:80991566-80991585 | Msa1081190:intron | 60.0% |
| GCGGTTAGGCCGAGTGGTAA+TGG | - | chr7_2:80992092-80992111 | Msa1081190:CDS | 60.0% | |
| !! | GGCCGAGTGGTAATGGACTC+GGG | - | chr7_2:80992099-80992118 | Msa1081190:CDS | 60.0% |
| AGGGAAGCCCTTGCCCAAGA+AGG | - | chr7_2:80992548-80992567 | Msa1081190:intron | 60.0% | |
| GGGAAGCCCTTGCCCAAGAA+GGG | - | chr7_2:80992549-80992568 | Msa1081190:intron | 60.0% | |
| TGCGAGCTTGATGGAGTCCG+TGG | - | chr7_2:80993046-80993065 | Msa1081190:intron | 60.0% | |
| GGTGGAGCGGGAGTGGCTAT+TGG | - | chr7_2:80990704-80990723 | Msa1081190:three_prime_UTR | 65.0% | |
| TCATGGGACCGAACCGGGAC+TGG | - | chr7_2:80991549-80991568 | Msa1081190:intron | 65.0% | |
| GGCCAGGAAGGAACCAGTCC+CGG | + | chr7_2:80991565-80991584 | None:intergenic | 65.0% | |
| !! | GGACTGGTTCCTTCCTGGCC+AGG | - | chr7_2:80991565-80991584 | Msa1081190:intron | 65.0% |
| ACCTGCAGGTGGAGCGGGAG+TGG | - | chr7_2:80990697-80990716 | Msa1081190:three_prime_UTR | 70.0% | |
| GCCACTCCCGCTCCACCTGC+AGG | + | chr7_2:80990701-80990720 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 80990343 | 80995064 | 80990343 | ID=Msa1081190;Name=Msa1081190 |
| chr7_2 | mRNA | 80990343 | 80995064 | 80990343 | ID=Msa1081190-mRNA-1;Parent=Msa1081190;Name=Msa1081190-mRNA-1;_AED=0.15;_eAED=0.15;_QI=112|1|1|1|0.83|0.71|7|385|330 |
| chr7_2 | exon | 80990343 | 80990836 | 80990343 | ID=Msa1081190-mRNA-1:exon:20647;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80990965 | 80991023 | 80990965 | ID=Msa1081190-mRNA-1:exon:20646;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80992008 | 80992145 | 80992008 | ID=Msa1081190-mRNA-1:exon:20645;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80992239 | 80992487 | 80992239 | ID=Msa1081190-mRNA-1:exon:20644;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80992767 | 80993011 | 80992767 | ID=Msa1081190-mRNA-1:exon:20643;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80994546 | 80994755 | 80994546 | ID=Msa1081190-mRNA-1:exon:20642;Parent=Msa1081190-mRNA-1 |
| chr7_2 | exon | 80994970 | 80995064 | 80994970 | ID=Msa1081190-mRNA-1:exon:20641;Parent=Msa1081190-mRNA-1 |
| chr7_2 | five_prime_UTR | 80994970 | 80995064 | 80994970 | ID=Msa1081190-mRNA-1:five_prime_utr;Parent=Msa1081190-mRNA-1 |
| chr7_2 | five_prime_UTR | 80994739 | 80994755 | 80994739 | ID=Msa1081190-mRNA-1:five_prime_utr;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80994546 | 80994738 | 80994546 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80992767 | 80993011 | 80992767 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80992239 | 80992487 | 80992239 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80992008 | 80992145 | 80992008 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80990965 | 80991023 | 80990965 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | CDS | 80990728 | 80990836 | 80990728 | ID=Msa1081190-mRNA-1:cds;Parent=Msa1081190-mRNA-1 |
| chr7_2 | three_prime_UTR | 80990343 | 80990727 | 80990343 | ID=Msa1081190-mRNA-1:three_prime_utr;Parent=Msa1081190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
