Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081200 | XP_013450277.1 | 98.182 | 330 | 4 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081200 | sp|Q8GW10|BAH1L_ARATH | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.37e-140 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081200 | A0A072UEU1 | 98.182 | 330 | 4 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042550 | Msa1081200 | 0.805763 | 1.140700e-49 | -8.615850e-47 |
| Msa0050820 | Msa1081200 | 0.812652 | 3.806650e-51 | -8.615850e-47 |
| Msa0622120 | Msa1081200 | 0.820627 | 6.206327e-53 | -8.615850e-47 |
| Msa0667780 | Msa1081200 | 0.805665 | 1.196192e-49 | -8.615850e-47 |
| Msa0667800 | Msa1081200 | 0.809163 | 2.167498e-50 | -8.615850e-47 |
| Msa0146540 | Msa1081200 | 0.806577 | 7.687410e-50 | -8.615850e-47 |
| Msa0173390 | Msa1081200 | 0.804859 | 1.764793e-49 | -8.615850e-47 |
| Msa0388670 | Msa1081200 | 0.965719 | 5.703071e-125 | -8.615850e-47 |
| Msa0397820 | Msa1081200 | 0.819129 | 1.365922e-52 | -8.615850e-47 |
| Msa1063420 | Msa1081200 | 0.800519 | 1.387507e-48 | -8.615850e-47 |
| Msa1081190 | Msa1081200 | 0.972033 | 4.131363e-134 | -8.615850e-47 |
| Msa1081200 | Msa1126550 | 0.951441 | 2.029200e-109 | -8.615850e-47 |
| Msa1081200 | Msa1227150 | 0.804513 | 2.083948e-49 | -8.615850e-47 |
| Msa1081200 | Msa1234910 | 0.828709 | 7.733320e-55 | -8.615850e-47 |
| Msa1081200 | Msa1372150 | 0.803845 | 2.869378e-49 | -8.615850e-47 |
| Msa0526020 | Msa1081200 | 0.809948 | 1.470092e-50 | -8.615850e-47 |
| Msa0532970 | Msa1081200 | 0.807524 | 4.847372e-50 | -8.615850e-47 |
| Msa0562570 | Msa1081200 | 0.800170 | 1.634224e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081200 | MtrunA17_Chr7g0268131 | 98.182 | 330 | 4 | 1 | 1 | 330 | 1 | 328 | 0.0 | 671 |
| Msa1081200 | MtrunA17_Chr1g0195671 | 41.088 | 331 | 178 | 3 | 1 | 329 | 1 | 316 | 8.73e-84 | 256 |
| Msa1081200 | MtrunA17_Chr7g0269281 | 42.598 | 331 | 173 | 3 | 1 | 329 | 1 | 316 | 1.10e-83 | 255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081200 | AT2G38920.5 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.44e-141 | 402 |
| Msa1081200 | AT2G38920.1 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.44e-141 | 402 |
| Msa1081200 | AT2G38920.6 | 60.000 | 335 | 126 | 4 | 1 | 328 | 1 | 334 | 4.44e-141 | 402 |
| Msa1081200 | AT2G38920.2 | 60.000 | 335 | 125 | 5 | 1 | 328 | 1 | 333 | 1.73e-139 | 398 |
| Msa1081200 | AT1G02860.1 | 41.813 | 342 | 179 | 8 | 1 | 329 | 1 | 335 | 3.13e-88 | 268 |
| Msa1081200 | AT2G38920.4 | 58.475 | 236 | 90 | 4 | 1 | 229 | 1 | 235 | 2.81e-87 | 263 |
| Msa1081200 | AT1G02860.2 | 41.813 | 342 | 177 | 9 | 1 | 329 | 1 | 333 | 5.73e-86 | 262 |
| Msa1081200 | AT2G38920.3 | 57.269 | 227 | 89 | 4 | 1 | 220 | 1 | 226 | 8.30e-81 | 246 |
| Msa1081200 | AT1G02860.3 | 38.430 | 242 | 129 | 8 | 1 | 229 | 1 | 235 | 4.46e-45 | 154 |
Find 88 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCTATTAAGAGATATTA+TGG | 0.169364 | 7_2:-81013336 | Msa1081200:three_prime_UTR |
| ACTCTGGACTTGCAGCTTTA+AGG | 0.187562 | 7_2:+81014684 | None:intergenic |
| TTCTCAGGTGCAAAGATTAT+TGG | 0.189972 | 7_2:-81013778 | Msa1081200:intron |
| AGAATTGTTCAAATAAAATT+TGG | 0.193267 | 7_2:+81013423 | None:intergenic |
| TGAAGCAGTCAAGGGAATTT+TGG | 0.193522 | 7_2:-81013721 | Msa1081200:CDS |
| CAATTAGAATTCTCCCTTCT+TGG | 0.214086 | 7_2:+81015474 | None:intergenic |
| CCTCATCGCAATTGCATTCA+TGG | 0.220874 | 7_2:+81015442 | None:intergenic |
| TAAGATGTTATTCAGTAAAC+TGG | 0.242417 | 7_2:+81013360 | None:intergenic |
| CTCACCTTGGCTGGTTGAAT+TGG | 0.242710 | 7_2:-81015050 | Msa1081200:CDS |
| CATCTTGTCCACTTGAATTC+AGG | 0.267892 | 7_2:+81015017 | None:intergenic |
| ATCAAACTCTACCTCAAATA+TGG | 0.279903 | 7_2:+81013524 | None:intergenic |
| TGCATCTGTGATGACTTTCC+AGG | 0.286509 | 7_2:-81014708 | Msa1081200:CDS |
| GTGCACATATTGAATATAAC+AGG | 0.342132 | 7_2:-81017312 | Msa1081200:CDS |
| AATTAGAATTCTCCCTTCTT+GGG | 0.369748 | 7_2:+81015475 | None:intergenic |
| AGCAAATGCCAAATAGAAAA+TGG | 0.371078 | 7_2:-81013616 | Msa1081200:three_prime_UTR |
| TCACCTTGGCTGGTTGAATT+GGG | 0.383747 | 7_2:-81015049 | Msa1081200:CDS |
| GGAAATAGCGAAATGAAATT+CGG | 0.391506 | 7_2:-81017391 | Msa1081200:exon |
| AGAAAAGAAAATTACTGTAT+AGG | 0.399557 | 7_2:+81013498 | None:intergenic |
| TATTCAAGCTTAATAGAATC+TGG | 0.400747 | 7_2:+81014917 | None:intergenic |
| CATATAGGACACTTTGACTC+TGG | 0.405982 | 7_2:+81014668 | None:intergenic |
| GGTGGAGCGGGAGTGGCTAT+TGG | 0.406523 | 7_2:-81017344 | Msa1081200:CDS |
| GCGTTCATTTCATTCTTCTC+AGG | 0.408650 | 7_2:-81017632 | Msa1081200:intron |
| TTCATGTGATTTAAATGTAA+TGG | 0.410668 | 7_2:-81014963 | Msa1081200:CDS |
| TCAACTCGGAGAAGAACTTC+TGG | 0.410793 | 7_2:+81015633 | None:intergenic |
| AAGATTGACATTGACATAAC+TGG | 0.415523 | 7_2:+81017215 | None:intergenic |
| ACCTGCAGGTGGAGCGGGAG+TGG | 0.434211 | 7_2:-81017351 | Msa1081200:CDS |
| GTACGAAGTACAGTTTCGTT+AGG | 0.435687 | 7_2:+81017665 | None:intergenic |
| ATCCTATTAAGAGATATTAT+GGG | 0.437447 | 7_2:-81013335 | Msa1081200:three_prime_UTR |
| ATGAAATGAACGCAAAGTAC+AGG | 0.439123 | 7_2:+81017642 | None:intergenic |
| ATTCATACCTCTCTGCATAT+AGG | 0.445967 | 7_2:+81014653 | None:intergenic |
| AGGTACACAGTTCTGTGAAT+GGG | 0.450562 | 7_2:-81015120 | Msa1081200:CDS |
| AAAGAGACTAGCAATTTGCT+TGG | 0.452650 | 7_2:-81013393 | Msa1081200:three_prime_UTR |
| CTTCATCTTCACATTGCAAA+AGG | 0.453905 | 7_2:-81015557 | Msa1081200:CDS |
| TTCTAACATTCGGACTGCCT+TGG | 0.455919 | 7_2:+81013945 | None:intergenic |
| GACTTGCAGCTTTAAGGCCC+TGG | 0.457593 | 7_2:+81014690 | None:intergenic |
| AGAGTACCTGCAGGTGGAGC+GGG | 0.460266 | 7_2:-81017356 | Msa1081200:CDS |
| ATTGGAAAGAAAGGCTAGCT+AGG | 0.460901 | 7_2:-81013760 | Msa1081200:CDS |
| TGGCCACAACTCAATGCATA+TGG | 0.463628 | 7_2:+81014761 | None:intergenic |
| CAAGATGGTTGCGAGCTTGA+TGG | 0.464213 | 7_2:-81015001 | Msa1081200:CDS |
| GCAAAGATTATTGGAAAGAA+AGG | 0.473719 | 7_2:-81013769 | Msa1081200:CDS |
| CAGCAATCCCACTGTATATG+TGG | 0.474837 | 7_2:+81013688 | None:intergenic |
| AATTCTCCCTTCTTGGGCAA+GGG | 0.477772 | 7_2:+81015481 | None:intergenic |
| GAATTCTCCCTTCTTGGGCA+AGG | 0.478477 | 7_2:+81015480 | None:intergenic |
| TTTGGAAGTTTAAATATGAA+AGG | 0.481803 | 7_2:+81013441 | None:intergenic |
| GAAAGGCTAGCTAGGGAAAG+AGG | 0.495583 | 7_2:-81013752 | Msa1081200:CDS |
| TCGATCTGCTTATGAAAAGA+AGG | 0.497598 | 7_2:-81013921 | Msa1081200:intron |
| CAGGTACACAGTTCTGTGAA+TGG | 0.499905 | 7_2:-81015121 | Msa1081200:CDS |
| GCAGATCGAGTTCTAACATT+CGG | 0.500588 | 7_2:+81013935 | None:intergenic |
| AAAGAAGCATCAGATATTGC+AGG | 0.508685 | 7_2:-81015608 | Msa1081200:CDS |
| CCTCAAATATGGATCGTTGA+GGG | 0.510627 | 7_2:+81013535 | None:intergenic |
| GCCACTCCCGCTCCACCTGC+AGG | 0.511617 | 7_2:+81017350 | None:intergenic |
| GTACAGTTTCGTTAGGGTCA+AGG | 0.514689 | 7_2:+81017672 | None:intergenic |
| CGAGAACTTAGGGAAGTTAG+TGG | 0.517609 | 7_2:-81013560 | Msa1081200:three_prime_UTR |
| GCATCTGTGATGACTTTCCA+GGG | 0.518610 | 7_2:-81014707 | Msa1081200:CDS |
| TACGAAGTACAGTTTCGTTA+GGG | 0.522874 | 7_2:+81017666 | None:intergenic |
| CTGAATTCAAGTGGACAAGA+TGG | 0.526532 | 7_2:-81015016 | Msa1081200:CDS |
| CAAGGTTGTCGAGAAGTGAA+TGG | 0.533729 | 7_2:+81017690 | None:intergenic |
| AGGGAAGCCCTTGCCCAAGA+AGG | 0.536511 | 7_2:-81015488 | Msa1081200:CDS |
| CCCTCAACGATCCATATTTG+AGG | 0.541541 | 7_2:-81013535 | Msa1081200:three_prime_UTR |
| AATCCATATGCATTGAGTTG+TGG | 0.545870 | 7_2:-81014764 | Msa1081200:CDS |
| GTGATCAAATGAAGCAGTCA+AGG | 0.545880 | 7_2:-81013730 | Msa1081200:CDS |
| TCTAAATTGTGCAATTTGCC+TGG | 0.547347 | 7_2:-81014891 | Msa1081200:intron |
| CACATGATTTGCAGAAGAAG+TGG | 0.551647 | 7_2:+81014741 | None:intergenic |
| GGGAAGCCCTTGCCCAAGAA+GGG | 0.569563 | 7_2:-81015487 | Msa1081200:CDS |
| TCCTATTAAGAGATATTATG+GGG | 0.572665 | 7_2:-81013334 | Msa1081200:three_prime_UTR |
| TTGGAAAGAAAGGCTAGCTA+GGG | 0.575920 | 7_2:-81013759 | Msa1081200:CDS |
| ATATACAGTGGGATTGCTGT+AGG | 0.578458 | 7_2:-81013684 | Msa1081200:exon |
| TGTCAATGTCAATCTTGCCC+AGG | 0.582570 | 7_2:-81017208 | Msa1081200:intron |
| TGATGCTTCTTTCATCAACT+CGG | 0.582662 | 7_2:+81015619 | None:intergenic |
| CATAACTGGTCTTTATCATG+AGG | 0.595621 | 7_2:+81017229 | None:intergenic |
| CACATTCAAAGAGTACCTGC+AGG | 0.598684 | 7_2:-81017365 | Msa1081200:CDS |
| AAGATGTTATTCAGTAAACT+GGG | 0.600665 | 7_2:+81013361 | None:intergenic |
| GCACCCAATTCAACCAGCCA+AGG | 0.608792 | 7_2:+81015046 | None:intergenic |
| AACTGGTCTTTATCATGAGG+AGG | 0.610379 | 7_2:+81017232 | None:intergenic |
| AAGAGTACCTGCAGGTGGAG+CGG | 0.611509 | 7_2:-81017357 | Msa1081200:CDS |
| ACCTCAAATATGGATCGTTG+AGG | 0.613399 | 7_2:+81013534 | None:intergenic |
| TGAAATGAACGCAAAGTACA+GGG | 0.623520 | 7_2:+81017643 | None:intergenic |
| GGTACACAGTTCTGTGAATG+GGG | 0.627407 | 7_2:-81015119 | Msa1081200:CDS |
| ATGCAATCCACATATACAGT+GGG | 0.629986 | 7_2:-81013695 | Msa1081200:CDS |
| GCAGAGTGGAGTTTATTCCA+AGG | 0.631763 | 7_2:-81013962 | Msa1081200:intron |
| TGATCAAATGAAGCAGTCAA+GGG | 0.638343 | 7_2:-81013729 | Msa1081200:CDS |
| CCATGAATGCAATTGCGATG+AGG | 0.653723 | 7_2:-81015442 | Msa1081200:CDS |
| ATTCAAAGAGTACCTGCAGG+TGG | 0.677747 | 7_2:-81017362 | Msa1081200:CDS |
| TGCGAGCTTGATGGAGTCCG+TGG | 0.679546 | 7_2:-81014992 | Msa1081200:CDS |
| AATCACATGAAAAGTGACCA+CGG | 0.698927 | 7_2:+81014975 | None:intergenic |
| CCTATTAAGAGATATTATGG+GGG | 0.704335 | 7_2:-81013333 | Msa1081200:three_prime_UTR |
| TATGCAATCCACATATACAG+TGG | 0.705145 | 7_2:-81013696 | Msa1081200:CDS |
| AAAGTGTCCTATATGCAGAG+AGG | 0.740633 | 7_2:-81014660 | Msa1081200:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTATGTTTAAAATCAA+CGG | - | chr7_2:81013946-81013965 | Msa1081200:CDS | 10.0% |
| !!! | TAAACATAGTTTAAAATTAA+TGG | + | chr7_2:81015321-81015340 | None:intergenic | 10.0% |
| !! | TAAATAAGTATAAATGAAAA+TGG | + | chr7_2:81015725-81015744 | None:intergenic | 10.0% |
| !! | TGGTTAATTAATGTTTAATT+AGG | - | chr7_2:81013657-81013676 | Msa1081200:three_prime_UTR | 15.0% |
| !! | ATTAATGTTTAATTAGGATT+TGG | - | chr7_2:81013663-81013682 | Msa1081200:three_prime_UTR | 15.0% |
| !!! | ATTTTGCTTATAATTAGTAA+CGG | + | chr7_2:81014112-81014131 | None:intergenic | 15.0% |
| !!! | ATAAGCAAATTTTACTTTTT+AGG | + | chr7_2:81014214-81014233 | None:intergenic | 15.0% |
| !! | AATTAATTAATTGCTAGTAT+CGG | - | chr7_2:81014622-81014641 | Msa1081200:intron | 15.0% |
| !! | AATACAAAAGAACTTAAAAA+AGG | - | chr7_2:81014919-81014938 | Msa1081200:CDS | 15.0% |
| !!! | AACATTTTAAAAAAGAATCA+TGG | + | chr7_2:81015034-81015053 | None:intergenic | 15.0% |
| !! | ACACATAATAATTTACTTAA+TGG | - | chr7_2:81015245-81015264 | Msa1081200:intron | 15.0% |
| !!! | ATTTTTTTTTTTTCATAGCA+TGG | + | chr7_2:81016228-81016247 | None:intergenic | 15.0% |
| !!! | AAATTTTGTGTCATTATAAA+TGG | + | chr7_2:81016465-81016484 | None:intergenic | 15.0% |
| !! | ATCATATAATGATATACTTA+TGG | + | chr7_2:81016913-81016932 | None:intergenic | 15.0% |
| !! | AGAATTGTTCAAATAAAATT+TGG | + | chr7_2:81017655-81017674 | None:intergenic | 15.0% |
| !!! | AATTTTATTTGAACAATTCT+CGG | - | chr7_2:81017655-81017674 | Msa1081200:five_prime_UTR | 15.0% |
| !!! | AAAAGGTAAATATTCTGAAA+GGG | + | chr7_2:81013481-81013500 | None:intergenic | 20.0% |
| !! | AAAAAGGTAAATATTCTGAA+AGG | + | chr7_2:81013482-81013501 | None:intergenic | 20.0% |
| !! | TATTCAATTAATGATGTATG+TGG | + | chr7_2:81014189-81014208 | None:intergenic | 20.0% |
| !! | TATTAACCACAAATTTATGT+CGG | + | chr7_2:81014359-81014378 | None:intergenic | 20.0% |
| !! | ACATAAATTTGTGGTTAATA+AGG | - | chr7_2:81014359-81014378 | Msa1081200:intron | 20.0% |
| !! | TATATTAGTGCAATAAGTAA+TGG | - | chr7_2:81014677-81014696 | Msa1081200:CDS | 20.0% |
| !! | ATCTATTGTTTAATAACTCT+TGG | - | chr7_2:81014978-81014997 | Msa1081200:CDS | 20.0% |
| !!! | AGTTTTTATTCATTAACATG+CGG | - | chr7_2:81015097-81015116 | Msa1081200:CDS | 20.0% |
| !! | TATGTTTAATCAAAATACTC+AGG | - | chr7_2:81015333-81015352 | Msa1081200:intron | 20.0% |
| !! | TAAGTATAAATGAAAATGGA+GGG | + | chr7_2:81015721-81015740 | None:intergenic | 20.0% |
| !! | ATAAGTATAAATGAAAATGG+AGG | + | chr7_2:81015722-81015741 | None:intergenic | 20.0% |
| !!! | TATCTCATTCATTTTCATAT+GGG | + | chr7_2:81015853-81015872 | None:intergenic | 20.0% |
| !!! | TTATCTCATTCATTTTCATA+TGG | + | chr7_2:81015854-81015873 | None:intergenic | 20.0% |
| !! | TTCATGTGATTTAAATGTAA+TGG | - | chr7_2:81016112-81016131 | Msa1081200:intron | 20.0% |
| !!! | TAGTATTTTTGATAAATGCT+TGG | - | chr7_2:81016261-81016280 | Msa1081200:intron | 20.0% |
| !! | ATTTCGATCTCTATTAAATT+TGG | - | chr7_2:81016840-81016859 | Msa1081200:intron | 20.0% |
| !! | TTTCGATCTCTATTAAATTT+GGG | - | chr7_2:81016841-81016860 | Msa1081200:intron | 20.0% |
| !! | TATCATTATATGATTATCAC+AGG | - | chr7_2:81016919-81016938 | Msa1081200:intron | 20.0% |
| !! | ATTATGCTATAAATATCCAA+AGG | + | chr7_2:81017043-81017062 | None:intergenic | 20.0% |
| !! | GTCTTGATTATTAAAAACAA+AGG | + | chr7_2:81017075-81017094 | None:intergenic | 20.0% |
| !!! | ATGAAATGTTATTTTTGTAC+TGG | + | chr7_2:81017186-81017205 | None:intergenic | 20.0% |
| !!! | ATCAAAAACCATTTTCTATT+TGG | + | chr7_2:81017470-81017489 | None:intergenic | 20.0% |
| !! | AAAATAAAAACGAGAACTTA+GGG | - | chr7_2:81017505-81017524 | Msa1081200:intron | 20.0% |
| !! | AGAAAAGAAAATTACTGTAT+AGG | + | chr7_2:81017580-81017599 | None:intergenic | 20.0% |
| !! | TTTGGAAGTTTAAATATGAA+AGG | + | chr7_2:81017637-81017656 | None:intergenic | 20.0% |
| !! | AATCCTATTAAGAGATATTA+TGG | - | chr7_2:81017739-81017758 | Msa1081200:five_prime_UTR | 20.0% |
| !! | ATCCTATTAAGAGATATTAT+GGG | - | chr7_2:81017740-81017759 | Msa1081200:five_prime_UTR | 20.0% |
| !!! | TATTTTAGTGACAAAATATG+TGG | - | chr7_2:81017773-81017792 | Msa1081200:five_prime_UTR | 20.0% |
| !!! | ATTTTCGAACACTGATTTAT+TGG | - | chr7_2:81013637-81013656 | Msa1081200:three_prime_UTR | 25.0% |
| ! | TCAATATTGATATATTCCCT+GGG | + | chr7_2:81014246-81014265 | None:intergenic | 25.0% |
| ! | TTCAATATTGATATATTCCC+TGG | + | chr7_2:81014247-81014266 | None:intergenic | 25.0% |
| ! | AATTAATTATTCCATAACCC+TGG | + | chr7_2:81014610-81014629 | None:intergenic | 25.0% |
| ! | AGTATAATGAGAATAAGACT+TGG | - | chr7_2:81014720-81014739 | Msa1081200:CDS | 25.0% |
| ! | GTATAATGAGAATAAGACTT+GGG | - | chr7_2:81014721-81014740 | Msa1081200:CDS | 25.0% |
| ! | TGCTTAAAATAAGCCTAAAA+TGG | - | chr7_2:81014752-81014771 | Msa1081200:CDS | 25.0% |
| ! | TAAAATAAGCCTAAAATGGT+TGG | - | chr7_2:81014756-81014775 | Msa1081200:CDS | 25.0% |
| !! | GTGTATGGAAAAAATCTTTT+TGG | - | chr7_2:81015203-81015222 | Msa1081200:intron | 25.0% |
| ! | AAATTAATGGCAATTCACAA+AGG | + | chr7_2:81015308-81015327 | None:intergenic | 25.0% |
| !!! | AGTCTTTTTAATTAACCAGA+AGG | - | chr7_2:81015366-81015385 | Msa1081200:intron | 25.0% |
| ! | AAGTATAAATGAAAATGGAG+GGG | + | chr7_2:81015720-81015739 | None:intergenic | 25.0% |
| ! | ACGATCTATAATGAATACAA+GGG | - | chr7_2:81015807-81015826 | Msa1081200:intron | 25.0% |
| ! | TGAAAATGAATGAGATAACA+AGG | - | chr7_2:81015856-81015875 | Msa1081200:intron | 25.0% |
| !!! | ATCCTTTGTTATTTTACTAC+AGG | - | chr7_2:81015935-81015954 | Msa1081200:intron | 25.0% |
| ! | TACCTGTAGTAAAATAACAA+AGG | + | chr7_2:81015940-81015959 | None:intergenic | 25.0% |
| ! | TATTCAAGCTTAATAGAATC+TGG | + | chr7_2:81016161-81016180 | None:intergenic | 25.0% |
| ! | AATTGACCCCATTTAAAAAT+CGG | + | chr7_2:81016639-81016658 | None:intergenic | 25.0% |
| ! | ACATCAATGAAATTCAAGAT+AGG | + | chr7_2:81016953-81016972 | None:intergenic | 25.0% |
| ! | TATCTTGAATTTCATTGATG+TGG | - | chr7_2:81016952-81016971 | Msa1081200:intron | 25.0% |
| ! | TAAATATCCAAAGGTTAACT+AGG | + | chr7_2:81017034-81017053 | None:intergenic | 25.0% |
| !!! | TAGGTTTTGTTGTTATGATT+TGG | - | chr7_2:81017410-81017429 | Msa1081200:intron | 25.0% |
| !! | TTTTTGATCAAAGAGAGAAA+CGG | - | chr7_2:81017482-81017501 | Msa1081200:intron | 25.0% |
| ! | GAAAATAAAAACGAGAACTT+AGG | - | chr7_2:81017504-81017523 | Msa1081200:intron | 25.0% |
| !! | TAATTTTCTTTTCTCTCTCT+TGG | - | chr7_2:81017586-81017605 | Msa1081200:intron | 25.0% |
| ! | AAGATGTTATTCAGTAAACT+GGG | + | chr7_2:81017717-81017736 | None:intergenic | 25.0% |
| ! | TAAGATGTTATTCAGTAAAC+TGG | + | chr7_2:81017718-81017737 | None:intergenic | 25.0% |
| ! | TCCTATTAAGAGATATTATG+GGG | - | chr7_2:81017741-81017760 | Msa1081200:five_prime_UTR | 25.0% |
| GGATGAAATGAATAGGAAAA+AGG | + | chr7_2:81013498-81013517 | None:intergenic | 30.0% | |
| GTAAAAATGAAAAAACGACG+AGG | + | chr7_2:81013522-81013541 | None:intergenic | 30.0% | |
| GGAAATAGCGAAATGAAATT+CGG | - | chr7_2:81013684-81013703 | Msa1081200:exon | 30.0% | |
| GTGCACATATTGAATATAAC+AGG | - | chr7_2:81013763-81013782 | Msa1081200:CDS | 30.0% | |
| AAGATTGACATTGACATAAC+TGG | + | chr7_2:81013863-81013882 | None:intergenic | 30.0% | |
| AATGTAAGCTTTCATTTGAG+TGG | - | chr7_2:81013990-81014009 | Msa1081200:intron | 30.0% | |
| ! | TGCTTATAATTAGTAACGGA+GGG | + | chr7_2:81014108-81014127 | None:intergenic | 30.0% |
| TTGCTTATAATTAGTAACGG+AGG | + | chr7_2:81014109-81014128 | None:intergenic | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | chr7_2:81014177-81014196 | None:intergenic | 30.0% | |
| TTGCTTATAATTAGAAACCC+AGG | - | chr7_2:81014226-81014245 | Msa1081200:intron | 30.0% | |
| TGCTTATAATTAGAAACCCA+GGG | - | chr7_2:81014227-81014246 | Msa1081200:intron | 30.0% | |
| ! | AAATCTGTGTTGATCAAGTT+CGG | + | chr7_2:81014288-81014307 | None:intergenic | 30.0% |
| ACATCATTAACAACGATTTC+AGG | - | chr7_2:81014310-81014329 | Msa1081200:intron | 30.0% | |
| GGTTAATAAGGTTTCATAGA+TGG | - | chr7_2:81014371-81014390 | Msa1081200:intron | 30.0% | |
| ! | AGCTAATGAAGTGTTAGATT+TGG | + | chr7_2:81014416-81014435 | None:intergenic | 30.0% |
| AGGTTCCTATTTAATGTTCA+TGG | - | chr7_2:81014556-81014575 | Msa1081200:intron | 30.0% | |
| GGTTCCTATTTAATGTTCAT+GGG | - | chr7_2:81014557-81014576 | Msa1081200:intron | 30.0% | |
| TGATGAAAATTCTACAACGA+CGG | + | chr7_2:81014801-81014820 | None:intergenic | 30.0% | |
| ATGAAAGTTTCCTATGTAGA+TGG | - | chr7_2:81014821-81014840 | Msa1081200:intron | 30.0% | |
| ! | CAAAACTCCTTTTAAACTTG+TGG | - | chr7_2:81014883-81014902 | Msa1081200:intron | 30.0% |
| TGAACATCCACAAGTTTAAA+AGG | + | chr7_2:81014893-81014912 | None:intergenic | 30.0% | |
| TTTAAACTTGTGGATGTTCA+TGG | - | chr7_2:81014893-81014912 | Msa1081200:CDS | 30.0% | |
| CTTAAAAAAGGATTGAGATG+CGG | - | chr7_2:81014931-81014950 | Msa1081200:CDS | 30.0% | |
| !! | TACTCTCAGCTTTAAGTAAT+AGG | + | chr7_2:81015078-81015097 | None:intergenic | 30.0% |
| TTATTCATTAACATGCGGTT+AGG | - | chr7_2:81015102-81015121 | Msa1081200:CDS | 30.0% | |
| !!! | CCAGTGTTTTAAAAATGACA+GGG | - | chr7_2:81015568-81015587 | Msa1081200:CDS | 30.0% |
| AATTAGAATTCTCCCTTCTT+GGG | + | chr7_2:81015603-81015622 | None:intergenic | 30.0% | |
| AGTATAAATGAAAATGGAGG+GGG | + | chr7_2:81015719-81015738 | None:intergenic | 30.0% | |
| CACGATCTATAATGAATACA+AGG | - | chr7_2:81015806-81015825 | Msa1081200:intron | 30.0% | |
| !!! | TTTTTTTTCATAGCATGGCA+TGG | + | chr7_2:81016223-81016242 | None:intergenic | 30.0% |
| ATACCATCCTTAAAACAGAA+AGG | + | chr7_2:81016544-81016563 | None:intergenic | 30.0% | |
| !!! | TACCTCACCGATTTTTAAAT+GGG | - | chr7_2:81016629-81016648 | Msa1081200:intron | 30.0% |
| TTGCTTAAAATTAGAGTAGC+AGG | + | chr7_2:81016733-81016752 | None:intergenic | 30.0% | |
| TAATGTTGTGTCCATGATAA+AGG | + | chr7_2:81017001-81017020 | None:intergenic | 30.0% | |
| CATTTATCCTAGTTAACCTT+TGG | - | chr7_2:81017024-81017043 | Msa1081200:intron | 30.0% | |
| CACTCTGCATAAAAAAATGA+TGG | + | chr7_2:81017101-81017120 | None:intergenic | 30.0% | |
| !!! | CATCATTTTTTTATGCAGAG+TGG | - | chr7_2:81017099-81017118 | Msa1081200:intron | 30.0% |
| ! | AGCTACTTTCAATATTTCTC+AGG | - | chr7_2:81017282-81017301 | Msa1081200:CDS | 30.0% |
| GCAAAGATTATTGGAAAGAA+AGG | - | chr7_2:81017306-81017325 | Msa1081200:CDS | 30.0% | |
| CTCCTACAAAAATGTTTCAA+CGG | + | chr7_2:81017436-81017455 | None:intergenic | 30.0% | |
| AGCAAATGCCAAATAGAAAA+TGG | - | chr7_2:81017459-81017478 | Msa1081200:intron | 30.0% | |
| ATCAAACTCTACCTCAAATA+TGG | + | chr7_2:81017554-81017573 | None:intergenic | 30.0% | |
| CCTATTAAGAGATATTATGG+GGG | - | chr7_2:81017742-81017761 | Msa1081200:five_prime_UTR | 30.0% | |
| TACGAAGTACAGTTTCGTTA+GGG | + | chr7_2:81013412-81013431 | None:intergenic | 35.0% | |
| TGAAATGAACGCAAAGTACA+GGG | + | chr7_2:81013435-81013454 | None:intergenic | 35.0% | |
| ATGAAATGAACGCAAAGTAC+AGG | + | chr7_2:81013436-81013455 | None:intergenic | 35.0% | |
| AAAATGAAAAAACGACGAGG+AGG | + | chr7_2:81013519-81013538 | None:intergenic | 35.0% | |
| !! | CATAACTGGTCTTTATCATG+AGG | + | chr7_2:81013849-81013868 | None:intergenic | 35.0% |
| ACATAAAGCGTAAAACAGAC+AGG | + | chr7_2:81013898-81013917 | None:intergenic | 35.0% | |
| GGTTCTTACAGAAATGTCAT+TGG | - | chr7_2:81014025-81014044 | Msa1081200:intron | 35.0% | |
| TTCACACACGAGTAGTTTAA+TGG | - | chr7_2:81014077-81014096 | Msa1081200:intron | 35.0% | |
| ! | CTTATAATTAGTAACGGAGG+GGG | + | chr7_2:81014106-81014125 | None:intergenic | 35.0% |
| ! | GCTTATAATTAGTAACGGAG+GGG | + | chr7_2:81014107-81014126 | None:intergenic | 35.0% |
| !! | AAGTTCGGTTGATGGTTAAT+GGG | + | chr7_2:81014273-81014292 | None:intergenic | 35.0% |
| GTTAAGCCGACATAAATTTG+TGG | - | chr7_2:81014350-81014369 | Msa1081200:intron | 35.0% | |
| ATTAGCTAATCCCACTTAGT+GGG | - | chr7_2:81014429-81014448 | Msa1081200:intron | 35.0% | |
| GAGAATAAGACTTGGGAATT+AGG | - | chr7_2:81014728-81014747 | Msa1081200:CDS | 35.0% | |
| AATAAGCCTAAAATGGTTGG+TGG | - | chr7_2:81014759-81014778 | Msa1081200:CDS | 35.0% | |
| ATAAGCCTAAAATGGTTGGT+GGG | - | chr7_2:81014760-81014779 | Msa1081200:CDS | 35.0% | |
| AAGAAGAGAACCATCTACAT+AGG | + | chr7_2:81014834-81014853 | None:intergenic | 35.0% | |
| TGATGCTTCTTTCATCAACT+CGG | + | chr7_2:81015459-81015478 | None:intergenic | 35.0% | |
| !! | AAAGAAGCATCAGATATTGC+AGG | - | chr7_2:81015467-81015486 | Msa1081200:CDS | 35.0% |
| ! | CTTTTGCAATGTGAAGATGA+AGG | + | chr7_2:81015520-81015539 | None:intergenic | 35.0% |
| CTTCATCTTCACATTGCAAA+AGG | - | chr7_2:81015518-81015537 | Msa1081200:CDS | 35.0% | |
| !!! | GCCAGTGTTTTAAAAATGAC+AGG | - | chr7_2:81015567-81015586 | Msa1081200:CDS | 35.0% |
| !!! | CCCTGTCATTTTTAAAACAC+TGG | + | chr7_2:81015571-81015590 | None:intergenic | 35.0% |
| CAATTAGAATTCTCCCTTCT+TGG | + | chr7_2:81015604-81015623 | None:intergenic | 35.0% | |
| ! | TTGAACTTTTACACTCACCT+TGG | - | chr7_2:81016012-81016031 | Msa1081200:intron | 35.0% |
| ! | GCTTTTTACCTGAATTCAAG+TGG | - | chr7_2:81016050-81016069 | Msa1081200:intron | 35.0% |
| AATCACATGAAAAGTGACCA+CGG | + | chr7_2:81016103-81016122 | None:intergenic | 35.0% | |
| TCTAAATTGTGCAATTTGCC+TGG | - | chr7_2:81016184-81016203 | Msa1081200:intron | 35.0% | |
| ACAAAATCCTACCATATCAC+AGG | + | chr7_2:81016287-81016306 | None:intergenic | 35.0% | |
| ! | AATCCATATGCATTGAGTTG+TGG | - | chr7_2:81016311-81016330 | Msa1081200:intron | 35.0% |
| ATTCATACCTCTCTGCATAT+AGG | + | chr7_2:81016425-81016444 | None:intergenic | 35.0% | |
| TCACTCTAGATATCAATCAC+CGG | - | chr7_2:81016578-81016597 | Msa1081200:intron | 35.0% | |
| !!! | GTACCTCACCGATTTTTAAA+TGG | - | chr7_2:81016628-81016647 | Msa1081200:intron | 35.0% |
| !!! | ACCTCACCGATTTTTAAATG+GGG | - | chr7_2:81016630-81016649 | Msa1081200:intron | 35.0% |
| TTAAACTTCTTCAAACCGAC+TGG | + | chr7_2:81016666-81016685 | None:intergenic | 35.0% | |
| AAGCAACTCTTGCTTGTATA+AGG | - | chr7_2:81016747-81016766 | Msa1081200:intron | 35.0% | |
| ATTACAGAAGTTTGTGCATG+AGG | + | chr7_2:81016794-81016813 | None:intergenic | 35.0% | |
| TTTCATTGATGTGGCTGTTA+TGG | - | chr7_2:81016961-81016980 | Msa1081200:intron | 35.0% | |
| TCGATCTGCTTATGAAAAGA+AGG | - | chr7_2:81017154-81017173 | Msa1081200:intron | 35.0% | |
| ATGTGCATACATGAATGCTA+TGG | + | chr7_2:81017250-81017269 | None:intergenic | 35.0% | |
| TTCTCAGGTGCAAAGATTAT+TGG | - | chr7_2:81017297-81017316 | Msa1081200:CDS | 35.0% | |
| TGATCAAATGAAGCAGTCAA+GGG | - | chr7_2:81017346-81017365 | Msa1081200:CDS | 35.0% | |
| TATGCAATCCACATATACAG+TGG | - | chr7_2:81017379-81017398 | Msa1081200:CDS | 35.0% | |
| ATGCAATCCACATATACAGT+GGG | - | chr7_2:81017380-81017399 | Msa1081200:CDS | 35.0% | |
| ! | AAAGAGACTAGCAATTTGCT+TGG | - | chr7_2:81017682-81017701 | Msa1081200:five_prime_UTR | 35.0% |
| CCCCCATAATATCTCTTAAT+AGG | + | chr7_2:81017745-81017764 | None:intergenic | 35.0% | |
| GTACGAAGTACAGTTTCGTT+AGG | + | chr7_2:81013413-81013432 | None:intergenic | 40.0% | |
| GCGTTCATTTCATTCTTCTC+AGG | - | chr7_2:81013443-81013462 | Msa1081200:three_prime_UTR | 40.0% | |
| ACGAGGAGGATGAAATGAAT+AGG | + | chr7_2:81013505-81013524 | None:intergenic | 40.0% | |
| GATCTCATACATGTGATGTG+AGG | - | chr7_2:81013582-81013601 | Msa1081200:three_prime_UTR | 40.0% | |
| !! | AACTGGTCTTTATCATGAGG+AGG | + | chr7_2:81013846-81013865 | None:intergenic | 40.0% |
| AAAACAGACAGGACATACCT+GGG | + | chr7_2:81013887-81013906 | None:intergenic | 40.0% | |
| TAAAACAGACAGGACATACC+TGG | + | chr7_2:81013888-81013907 | None:intergenic | 40.0% | |
| !! | CAAGTTCGGTTGATGGTTAA+TGG | + | chr7_2:81014274-81014293 | None:intergenic | 40.0% |
| TGTTGATCAAGTTCGGTTGA+TGG | + | chr7_2:81014281-81014300 | None:intergenic | 40.0% | |
| CATTAGCTAATCCCACTTAG+TGG | - | chr7_2:81014428-81014447 | Msa1081200:intron | 40.0% | |
| TAATCCCACTTAGTGGGATA+AGG | - | chr7_2:81014435-81014454 | Msa1081200:intron | 40.0% | |
| ! | TTATGTGCCCTTTTTCCAGA+TGG | - | chr7_2:81014525-81014544 | Msa1081200:intron | 40.0% |
| CACCTTACCATCTGGAAAAA+GGG | + | chr7_2:81014535-81014554 | None:intergenic | 40.0% | |
| CGGTCCCATGAACATTAAAT+AGG | + | chr7_2:81014564-81014583 | None:intergenic | 40.0% | |
| ! | TAAGCCTAAAATGGTTGGTG+GGG | - | chr7_2:81014761-81014780 | Msa1081200:CDS | 40.0% |
| ATAGGCACTATGTGTCAGTT+TGG | + | chr7_2:81015060-81015079 | None:intergenic | 40.0% | |
| ! | GCTTAAGGTAGTCTTGCTTA+AGG | + | chr7_2:81015151-81015170 | None:intergenic | 40.0% |
| AAGACTACCTTAAGCAAGAC+TGG | - | chr7_2:81015156-81015175 | Msa1081200:intron | 40.0% | |
| CGATCTTTGACTCTTGTGTA+TGG | - | chr7_2:81015188-81015207 | Msa1081200:intron | 40.0% | |
| ! | ACTTAATGGTTTGCCGTCTT+CGG | - | chr7_2:81015259-81015278 | Msa1081200:intron | 40.0% |
| TTGCAAAGAATGTCCGAAGA+CGG | + | chr7_2:81015275-81015294 | None:intergenic | 40.0% | |
| ACTGCATAAAGTGAACCTTC+TGG | + | chr7_2:81015384-81015403 | None:intergenic | 40.0% | |
| AGGTACACAGTTCTGTGAAT+GGG | - | chr7_2:81015955-81015974 | Msa1081200:intron | 40.0% | |
| CATCTTGTCCACTTGAATTC+AGG | + | chr7_2:81016061-81016080 | None:intergenic | 40.0% | |
| CTGAATTCAAGTGGACAAGA+TGG | - | chr7_2:81016059-81016078 | Msa1081200:intron | 40.0% | |
| CATGGAAATAGGATCTTACC+AGG | + | chr7_2:81016205-81016224 | None:intergenic | 40.0% | |
| TCATAGCATGGCATGGAAAT+AGG | + | chr7_2:81016216-81016235 | None:intergenic | 40.0% | |
| TAAATGCTTGGCCTGTGATA+TGG | - | chr7_2:81016273-81016292 | Msa1081200:intron | 40.0% | |
| ! | CACATGATTTGCAGAAGAAG+TGG | + | chr7_2:81016337-81016356 | None:intergenic | 40.0% |
| CATATAGGACACTTTGACTC+TGG | + | chr7_2:81016410-81016429 | None:intergenic | 40.0% | |
| ! | AAAGTGTCCTATATGCAGAG+AGG | - | chr7_2:81016415-81016434 | Msa1081200:intron | 40.0% |
| TACTAGTTCAGTTGTGCATC+TGG | - | chr7_2:81016484-81016503 | Msa1081200:intron | 40.0% | |
| CATCTGGACAGAAATGTGTT+TGG | - | chr7_2:81016500-81016519 | Msa1081200:intron | 40.0% | |
| !! | GACAGAAATGTGTTTGGTGT+AGG | - | chr7_2:81016506-81016525 | Msa1081200:intron | 40.0% |
| ! | TGGTCAGCCTTTCTGTTTTA+AGG | - | chr7_2:81016534-81016553 | Msa1081200:intron | 40.0% |
| !!! | CAGCCTTTCTGTTTTAAGGA+TGG | - | chr7_2:81016538-81016557 | Msa1081200:intron | 40.0% |
| ! | GGTGATTGATATCTAGAGTG+AGG | + | chr7_2:81016579-81016598 | None:intergenic | 40.0% |
| ACCCCATTTAAAAATCGGTG+AGG | + | chr7_2:81016634-81016653 | None:intergenic | 40.0% | |
| !! | AGAAGGAGAGAGTTGATAGT+TGG | + | chr7_2:81016698-81016717 | None:intergenic | 40.0% |
| ! | TATGATTATCACAGGCGTTG+TGG | - | chr7_2:81016927-81016946 | Msa1081200:intron | 40.0% |
| GATGTGGCTGTTATGGAATT+CGG | - | chr7_2:81016968-81016987 | Msa1081200:intron | 40.0% | |
| ATGTGGCTGTTATGGAATTC+GGG | - | chr7_2:81016969-81016988 | Msa1081200:intron | 40.0% | |
| TCGGGTAATGTCCTTTATCA+TGG | - | chr7_2:81016987-81017006 | Msa1081200:intron | 40.0% | |
| ! | GCAGATCGAGTTCTAACATT+CGG | + | chr7_2:81017143-81017162 | None:intergenic | 40.0% |
| ! | ATTGGAAAGAAAGGCTAGCT+AGG | - | chr7_2:81017315-81017334 | Msa1081200:CDS | 40.0% |
| ! | TTGGAAAGAAAGGCTAGCTA+GGG | - | chr7_2:81017316-81017335 | Msa1081200:CDS | 40.0% |
| GTGATCAAATGAAGCAGTCA+AGG | - | chr7_2:81017345-81017364 | Msa1081200:CDS | 40.0% | |
| ! | TGAAGCAGTCAAGGGAATTT+TGG | - | chr7_2:81017354-81017373 | Msa1081200:CDS | 40.0% |
| ATATACAGTGGGATTGCTGT+AGG | - | chr7_2:81017391-81017410 | Msa1081200:exon | 40.0% | |
| ! | GGCCGTTGAAACATTTTTGT+AGG | - | chr7_2:81017431-81017450 | Msa1081200:intron | 40.0% |
| CCTCAAATATGGATCGTTGA+GGG | + | chr7_2:81017543-81017562 | None:intergenic | 40.0% | |
| ACCTCAAATATGGATCGTTG+AGG | + | chr7_2:81017544-81017563 | None:intergenic | 40.0% | |
| CAAGGTTGTCGAGAAGTGAA+TGG | + | chr7_2:81013388-81013407 | None:intergenic | 45.0% | |
| GTACAGTTTCGTTAGGGTCA+AGG | + | chr7_2:81013406-81013425 | None:intergenic | 45.0% | |
| !! | CACATTCAAAGAGTACCTGC+AGG | - | chr7_2:81013710-81013729 | Msa1081200:CDS | 45.0% |
| !! | ATTCAAAGAGTACCTGCAGG+TGG | - | chr7_2:81013713-81013732 | Msa1081200:CDS | 45.0% |
| TGTCAATGTCAATCTTGCCC+AGG | - | chr7_2:81013867-81013886 | Msa1081200:intron | 45.0% | |
| TTTGAGTGGACGATTCAACG+TGG | - | chr7_2:81014004-81014023 | Msa1081200:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7_2:81014442-81014461 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | + | chr7_2:81014443-81014462 | None:intergenic | 45.0% |
| ! | TGCCCTTTTTCCAGATGGTA+AGG | - | chr7_2:81014530-81014549 | Msa1081200:intron | 45.0% |
| GCACCTTACCATCTGGAAAA+AGG | + | chr7_2:81014536-81014555 | None:intergenic | 45.0% | |
| ! | TTTTCCAGATGGTAAGGTGC+AGG | - | chr7_2:81014536-81014555 | Msa1081200:intron | 45.0% |
| TAATGTTCATGGGACCGAAC+CGG | - | chr7_2:81014567-81014586 | Msa1081200:intron | 45.0% | |
| ATTATTCCATAACCCTGGCC+AGG | + | chr7_2:81014605-81014624 | None:intergenic | 45.0% | |
| CCTCTAACCAGTCTTGCTTA+AGG | + | chr7_2:81015166-81015185 | None:intergenic | 45.0% | |
| ! | CCTTAAGCAAGACTGGTTAG+AGG | - | chr7_2:81015163-81015182 | Msa1081200:intron | 45.0% |
| ATGGCAATTCACAAAGGCTC+TGG | + | chr7_2:81015302-81015321 | None:intergenic | 45.0% | |
| TCAACTCGGAGAAGAACTTC+TGG | + | chr7_2:81015445-81015464 | None:intergenic | 45.0% | |
| AATTCTCCCTTCTTGGGCAA+GGG | + | chr7_2:81015597-81015616 | None:intergenic | 45.0% | |
| CCTCATCGCAATTGCATTCA+TGG | + | chr7_2:81015636-81015655 | None:intergenic | 45.0% | |
| CCATGAATGCAATTGCGATG+AGG | - | chr7_2:81015633-81015652 | Msa1081200:CDS | 45.0% | |
| CAGGTACACAGTTCTGTGAA+TGG | - | chr7_2:81015954-81015973 | Msa1081200:intron | 45.0% | |
| GGTACACAGTTCTGTGAATG+GGG | - | chr7_2:81015956-81015975 | Msa1081200:intron | 45.0% | |
| ! | ACTTTTACACTCACCTTGGC+TGG | - | chr7_2:81016016-81016035 | Msa1081200:intron | 45.0% |
| ! | TCACCTTGGCTGGTTGAATT+GGG | - | chr7_2:81016026-81016045 | Msa1081200:intron | 45.0% |
| TGGCCACAACTCAATGCATA+TGG | + | chr7_2:81016317-81016336 | None:intergenic | 45.0% | |
| TGCATCTGTGATGACTTTCC+AGG | - | chr7_2:81016367-81016386 | Msa1081200:intron | 45.0% | |
| GCATCTGTGATGACTTTCCA+GGG | - | chr7_2:81016368-81016387 | Msa1081200:intron | 45.0% | |
| ACTCTGGACTTGCAGCTTTA+AGG | + | chr7_2:81016394-81016413 | None:intergenic | 45.0% | |
| !! | GAAATGTGTTTGGTGTAGGC+TGG | - | chr7_2:81016510-81016529 | Msa1081200:intron | 45.0% |
| ! | ATATCTAGAGTGAGGCAGAC+GGG | + | chr7_2:81016571-81016590 | None:intergenic | 45.0% |
| ! | GATATCTAGAGTGAGGCAGA+CGG | + | chr7_2:81016572-81016591 | None:intergenic | 45.0% |
| AGAGTAGCAGGCTTAAGAGA+GGG | + | chr7_2:81016721-81016740 | None:intergenic | 45.0% | |
| TAGAGTAGCAGGCTTAAGAG+AGG | + | chr7_2:81016722-81016741 | None:intergenic | 45.0% | |
| GCACATTAACTACGAGCGAT+AGG | + | chr7_2:81016869-81016888 | None:intergenic | 45.0% | |
| GCAGAGTGGAGTTTATTCCA+AGG | - | chr7_2:81017113-81017132 | Msa1081200:intron | 45.0% | |
| TTCTAACATTCGGACTGCCT+TGG | + | chr7_2:81017133-81017152 | None:intergenic | 45.0% | |
| CAGCAATCCCACTGTATATG+TGG | + | chr7_2:81017390-81017409 | None:intergenic | 45.0% | |
| CGAGAACTTAGGGAAGTTAG+TGG | - | chr7_2:81017515-81017534 | Msa1081200:intron | 45.0% | |
| CCCTCAACGATCCATATTTG+AGG | - | chr7_2:81017540-81017559 | Msa1081200:intron | 45.0% | |
| ! | CGTGTGTGAACTGTGTTGAC+AGG | + | chr7_2:81014067-81014086 | None:intergenic | 50.0% |
| AATGTTCATGGGACCGAACC+GGG | - | chr7_2:81014568-81014587 | Msa1081200:intron | 50.0% | |
| ! | CTCACCCCACCAACCATTTT+AGG | + | chr7_2:81014768-81014787 | None:intergenic | 50.0% |
| TTCTGGTCGCATACTGCAAG+TGG | + | chr7_2:81015428-81015447 | None:intergenic | 50.0% | |
| GAATTCTCCCTTCTTGGGCA+AGG | + | chr7_2:81015598-81015617 | None:intergenic | 50.0% | |
| ! | CTCACCTTGGCTGGTTGAAT+TGG | - | chr7_2:81016025-81016044 | Msa1081200:intron | 50.0% |
| CAAGATGGTTGCGAGCTTGA+TGG | - | chr7_2:81016074-81016093 | Msa1081200:intron | 50.0% | |
| TGCTTGGCCTGTGATATGGT+AGG | - | chr7_2:81016277-81016296 | Msa1081200:intron | 50.0% | |
| !! | TGTGTTTGGTGTAGGCTGGT+TGG | - | chr7_2:81016514-81016533 | Msa1081200:intron | 50.0% |
| ! | TATCTAGAGTGAGGCAGACG+GGG | + | chr7_2:81016570-81016589 | None:intergenic | 50.0% |
| TCCCCAACCACGACTACAAT+CGG | - | chr7_2:81016604-81016623 | Msa1081200:intron | 50.0% | |
| TCCGATTGTAGTCGTGGTTG+GGG | + | chr7_2:81016608-81016627 | None:intergenic | 50.0% | |
| CTCCGATTGTAGTCGTGGTT+GGG | + | chr7_2:81016609-81016628 | None:intergenic | 50.0% | |
| ACTCCGATTGTAGTCGTGGT+TGG | + | chr7_2:81016610-81016629 | None:intergenic | 50.0% | |
| AGGTACTCCGATTGTAGTCG+TGG | + | chr7_2:81016614-81016633 | None:intergenic | 50.0% | |
| TGGGGTCAATTCTTGCCAGT+CGG | - | chr7_2:81016648-81016667 | Msa1081200:intron | 50.0% | |
| GCATGAGGCTGACACTTGTA+AGG | + | chr7_2:81016779-81016798 | None:intergenic | 50.0% | |
| ! | GAAAGGCTAGCTAGGGAAAG+AGG | - | chr7_2:81017323-81017342 | Msa1081200:CDS | 50.0% |
| !! | AAGAGTACCTGCAGGTGGAG+CGG | - | chr7_2:81013718-81013737 | Msa1081200:CDS | 55.0% |
| GGAACCTGCACCTTACCATC+TGG | + | chr7_2:81014543-81014562 | None:intergenic | 55.0% | |
| TTCCTTCCTGGCCAGGGTTA+TGG | - | chr7_2:81014596-81014615 | Msa1081200:intron | 55.0% | |
| TTCCATAACCCTGGCCAGGA+AGG | + | chr7_2:81014601-81014620 | None:intergenic | 55.0% | |
| TAACATGCGGTTAGGCCGAG+TGG | - | chr7_2:81015110-81015129 | Msa1081200:CDS | 55.0% | |
| !! | AGGCCGAGTGGTAATGGACT+CGG | - | chr7_2:81015122-81015141 | Msa1081200:intron | 55.0% |
| TGCCCGAGTCCATTACCACT+CGG | + | chr7_2:81015128-81015147 | None:intergenic | 55.0% | |
| GCACCCAATTCAACCAGCCA+AGG | + | chr7_2:81016032-81016051 | None:intergenic | 55.0% | |
| !! | GACTTGCAGCTTTAAGGCCC+TGG | + | chr7_2:81016388-81016407 | None:intergenic | 55.0% |
| TAGTCGTGGTTGGGGATCTC+CGG | + | chr7_2:81016600-81016619 | None:intergenic | 55.0% | |
| GCAGGCTTAAGAGAGGGAGA+AGG | + | chr7_2:81016715-81016734 | None:intergenic | 55.0% | |
| ! | AGAGTACCTGCAGGTGGAGC+GGG | - | chr7_2:81013719-81013738 | Msa1081200:CDS | 60.0% |
| GGAAGGAACCAGTCCCGGTT+CGG | + | chr7_2:81014584-81014603 | None:intergenic | 60.0% | |
| !! | AACCGGGACTGGTTCCTTCC+TGG | - | chr7_2:81014584-81014603 | Msa1081200:intron | 60.0% |
| ! | GACTGGTTCCTTCCTGGCCA+GGG | - | chr7_2:81014590-81014609 | Msa1081200:intron | 60.0% |
| GCGGTTAGGCCGAGTGGTAA+TGG | - | chr7_2:81015116-81015135 | Msa1081200:CDS | 60.0% | |
| !! | GGCCGAGTGGTAATGGACTC+GGG | - | chr7_2:81015123-81015142 | Msa1081200:intron | 60.0% |
| AGGGAAGCCCTTGCCCAAGA+AGG | - | chr7_2:81015587-81015606 | Msa1081200:CDS | 60.0% | |
| GGGAAGCCCTTGCCCAAGAA+GGG | - | chr7_2:81015588-81015607 | Msa1081200:CDS | 60.0% | |
| TGCGAGCTTGATGGAGTCCG+TGG | - | chr7_2:81016083-81016102 | Msa1081200:intron | 60.0% | |
| GGTGGAGCGGGAGTGGCTAT+TGG | - | chr7_2:81013731-81013750 | Msa1081200:CDS | 65.0% | |
| TCATGGGACCGAACCGGGAC+TGG | - | chr7_2:81014573-81014592 | Msa1081200:intron | 65.0% | |
| GGCCAGGAAGGAACCAGTCC+CGG | + | chr7_2:81014589-81014608 | None:intergenic | 65.0% | |
| !! | GGACTGGTTCCTTCCTGGCC+AGG | - | chr7_2:81014589-81014608 | Msa1081200:intron | 65.0% |
| ACCTGCAGGTGGAGCGGGAG+TGG | - | chr7_2:81013724-81013743 | Msa1081200:CDS | 70.0% | |
| GCCACTCCCGCTCCACCTGC+AGG | + | chr7_2:81013728-81013747 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81013300 | 81017797 | 81013300 | ID=Msa1081200;Name=Msa1081200 |
| chr7_2 | mRNA | 81013300 | 81017797 | 81013300 | ID=Msa1081200-mRNA-1;Parent=Msa1081200;Name=Msa1081200-mRNA-1;_AED=0.15;_eAED=0.15;_QI=182|1|1|1|0.83|0.71|7|385|330 |
| chr7_2 | exon | 81013300 | 81013793 | 81013300 | ID=Msa1081200-mRNA-1:exon:20654;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81013922 | 81013980 | 81013922 | ID=Msa1081200-mRNA-1:exon:20653;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81014661 | 81014798 | 81014661 | ID=Msa1081200-mRNA-1:exon:20652;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81014892 | 81015140 | 81014892 | ID=Msa1081200-mRNA-1:exon:20651;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81015418 | 81015662 | 81015418 | ID=Msa1081200-mRNA-1:exon:20650;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81017209 | 81017418 | 81017209 | ID=Msa1081200-mRNA-1:exon:20649;Parent=Msa1081200-mRNA-1 |
| chr7_2 | exon | 81017633 | 81017797 | 81017633 | ID=Msa1081200-mRNA-1:exon:20648;Parent=Msa1081200-mRNA-1 |
| chr7_2 | five_prime_UTR | 81017633 | 81017797 | 81017633 | ID=Msa1081200-mRNA-1:five_prime_utr;Parent=Msa1081200-mRNA-1 |
| chr7_2 | five_prime_UTR | 81017402 | 81017418 | 81017402 | ID=Msa1081200-mRNA-1:five_prime_utr;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81017209 | 81017401 | 81017209 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81015418 | 81015662 | 81015418 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81014892 | 81015140 | 81014892 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81014661 | 81014798 | 81014661 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81013922 | 81013980 | 81013922 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | CDS | 81013685 | 81013793 | 81013685 | ID=Msa1081200-mRNA-1:cds;Parent=Msa1081200-mRNA-1 |
| chr7_2 | three_prime_UTR | 81013300 | 81013684 | 81013300 | ID=Msa1081200-mRNA-1:three_prime_utr;Parent=Msa1081200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
