AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1082280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082280 MtrunA17_Chr7g0269831 85.263 380 25 6 1 374 1 355 0.0 604
Msa1082280 MtrunA17_Chr1g0194951 46.115 399 160 9 1 374 1 369 3.50e-100 301
Msa1082280 MtrunA17_Chr4g0068061 58.919 185 66 2 1 185 1 175 1.19e-70 224
Msa1082280 MtrunA17_Chr7g0275911 71.552 116 33 0 1 116 1 116 6.85e-61 196
Msa1082280 MtrunA17_Chr8g0346561 71.552 116 33 0 1 116 1 116 1.05e-59 195
Msa1082280 MtrunA17_Chr4g0070641 65.414 133 44 1 1 133 1 131 7.67e-59 188
Msa1082280 MtrunA17_Chr3g0131121 60.544 147 57 1 1 147 1 146 2.46e-58 191
Msa1082280 MtrunA17_Chr1g0167661 63.768 138 44 1 1 138 1 132 2.53e-58 190
Msa1082280 MtrunA17_Chr4g0070611 65.414 133 44 1 1 133 1 131 3.37e-58 191
Msa1082280 MtrunA17_Chr1g0167691 69.828 116 35 0 1 116 1 116 3.24e-57 187
Msa1082280 MtrunA17_Chr4g0037141 69.828 116 35 0 1 116 1 116 5.71e-57 187
Msa1082280 MtrunA17_Chr1g0203411 67.241 116 38 0 1 116 1 116 1.54e-56 186
Msa1082280 MtrunA17_Chr1g0187761 68.966 116 36 0 1 116 1 116 1.66e-56 185
Msa1082280 MtrunA17_Chr3g0121241 68.750 112 35 0 5 116 35 146 2.07e-55 184
Msa1082280 MtrunA17_Chr8g0385321 68.644 118 37 0 1 118 1 118 6.51e-55 183
Msa1082280 MtrunA17_Chr4g0039971 67.241 116 38 0 1 116 2 117 6.75e-55 184
Msa1082280 MtrunA17_Chr3g0110351 67.241 116 38 0 1 116 1 116 2.36e-54 181
Msa1082280 MtrunA17_Chr7g0217741 67.241 116 38 0 1 116 1 116 3.38e-54 181
Msa1082280 MtrunA17_Chr7g0261281 60.150 133 50 1 1 133 1 130 4.87e-54 179
Msa1082280 MtrunA17_Chr5g0434571 67.241 116 38 0 1 116 37 152 5.91e-54 182
Msa1082280 MtrunA17_Chr4g0042671 67.241 116 38 0 1 116 1 116 1.55e-53 182
Msa1082280 MtrunA17_Chr3g0115821 64.655 116 41 0 1 116 1 116 1.60e-53 180
Msa1082280 MtrunA17_Chr7g0274581 62.931 116 43 0 1 116 1 116 1.65e-53 176
Msa1082280 MtrunA17_Chr8g0349261 66.949 118 37 2 1 116 1 118 5.19e-53 177
Msa1082280 MtrunA17_Chr6g0453471 65.517 116 40 0 1 116 1 116 6.25e-53 179
Msa1082280 MtrunA17_Chr2g0294811 81.522 92 17 0 1 92 1 92 2.02e-52 170
Msa1082280 MtrunA17_Chr2g0281071 65.812 117 39 1 1 116 1 117 2.46e-52 177
Msa1082280 MtrunA17_Chr2g0323411 64.655 116 41 0 1 116 1 116 3.14e-52 176
Msa1082280 MtrunA17_Chr4g0060721 63.793 116 42 0 1 116 2 117 1.47e-51 175
Msa1082280 MtrunA17_Chr4g0048511 65.812 117 39 1 1 116 1 117 1.80e-51 175
Msa1082280 MtrunA17_Chr7g0228891 64.655 116 41 0 1 116 1 116 1.15e-50 171
Msa1082280 MtrunA17_Chr4g0057031 61.345 119 46 0 1 119 1 119 1.60e-50 170
Msa1082280 MtrunA17_Chr7g0254411 56.923 130 56 0 1 130 1 130 1.94e-50 172
Msa1082280 MtrunA17_Chr5g0435101 59.829 117 47 0 3 119 2 118 8.52e-50 166
Msa1082280 MtrunA17_Chr5g0410961 61.207 116 45 0 1 116 1 116 1.37e-49 170
Msa1082280 MtrunA17_Chr3g0103281 62.931 116 43 0 1 116 1 116 2.10e-49 169
Msa1082280 MtrunA17_Chr3g0092401 52.482 141 60 1 1 141 2 135 5.45e-49 167
Msa1082280 MtrunA17_Chr5g0395281 60.345 116 46 0 1 116 1 116 3.62e-48 165
Msa1082280 MtrunA17_Chr8g0342521 53.957 139 63 1 1 139 1 138 1.32e-47 165
Msa1082280 MtrunA17_Chr1g0193801 63.793 116 42 0 1 116 1 116 2.71e-47 165
Msa1082280 MtrunA17_Chr4g0022931 51.316 152 70 2 1 151 1 149 3.75e-47 161
Msa1082280 MtrunA17_Chr7g0217221 58.621 116 48 0 1 116 1 116 3.81e-47 161
Msa1082280 MtrunA17_Chr1g0193371 62.931 116 43 0 1 116 1 116 4.34e-47 164
Msa1082280 MtrunA17_Chr7g0270891 62.931 116 43 0 1 116 1 116 7.39e-47 163
Msa1082280 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 9.82e-47 162
Msa1082280 MtrunA17_Chr4g0022891 62.500 112 42 0 1 112 1 112 1.38e-46 159
Msa1082280 MtrunA17_Chr8g0342541 59.483 116 47 0 1 116 1 116 1.45e-46 162
Msa1082280 MtrunA17_Chr2g0330041 51.389 144 64 1 1 144 1 138 2.32e-46 163
Msa1082280 MtrunA17_Chr2g0323351 51.370 146 68 1 1 143 1 146 1.68e-45 156
Msa1082280 MtrunA17_Chr1g0151941 55.462 119 52 1 1 118 1 119 1.73e-45 156
Msa1082280 MtrunA17_Chr4g0058631 61.207 116 45 0 1 116 1 116 1.91e-45 159
Msa1082280 MtrunA17_Chr4g0044421 60.000 115 45 1 3 116 2 116 2.20e-45 154
Msa1082280 MtrunA17_Chr6g0453211 58.559 111 46 0 1 111 1 111 3.70e-45 157
Msa1082280 MtrunA17_Chr8g0387421 56.897 116 50 0 1 116 1 116 3.77e-45 157
Msa1082280 MtrunA17_Chr4g0022881 50.336 149 66 1 1 149 1 141 5.32e-45 154
Msa1082280 MtrunA17_Chr4g0022901 58.974 117 47 1 1 116 1 117 5.41e-45 155
Msa1082280 MtrunA17_Chr5g0397231 60.000 110 44 0 1 110 1 110 7.20e-45 157
Msa1082280 MtrunA17_Chr4g0022911 49.359 156 70 3 1 151 1 152 9.20e-45 155
Msa1082280 MtrunA17_Chr3g0117091 61.207 116 45 0 1 116 1 116 9.60e-45 157
Msa1082280 MtrunA17_Chr5g0400821 58.120 117 48 1 1 116 1 117 1.03e-44 156
Msa1082280 MtrunA17_Chr7g0271241 65.138 109 38 0 1 109 1 109 1.12e-44 158
Msa1082280 MtrunA17_Chr2g0309911 58.475 118 48 1 1 118 1 117 1.40e-44 156
Msa1082280 MtrunA17_Chr1g0152011 58.120 117 48 1 1 116 1 117 1.53e-44 156
Msa1082280 MtrunA17_Chr8g0342481 52.113 142 60 2 1 141 1 135 2.31e-44 157
Msa1082280 MtrunA17_Chr4g0028311 55.372 121 53 1 1 120 1 121 3.48e-44 155
Msa1082280 MtrunA17_Chr7g0264641 55.833 120 52 1 1 119 1 120 4.53e-44 153
Msa1082280 MtrunA17_Chr2g0327351 60.360 111 43 1 1 110 1 111 5.69e-44 154
Msa1082280 MtrunA17_Chr1g0211161 60.526 114 45 0 3 116 4 117 5.75e-44 152
Msa1082280 MtrunA17_Chr6g0452271 56.034 116 51 0 1 116 1 116 1.13e-43 154
Msa1082280 MtrunA17_Chr3g0135311 55.085 118 52 1 1 117 1 118 1.96e-43 154
Msa1082280 MtrunA17_Chr4g0055981 60.185 108 43 0 9 116 52 159 7.74e-43 149
Msa1082280 MtrunA17_Chr6g0487491 48.649 148 63 3 1 135 1 148 9.75e-43 149
Msa1082280 MtrunA17_Chr8g0343831 62.136 103 39 0 14 116 10 112 1.06e-42 149
Msa1082280 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 1.12e-42 152
Msa1082280 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 1.24e-42 150
Msa1082280 MtrunA17_Chr7g0228231 60.952 105 41 0 12 116 14 118 2.09e-42 147
Msa1082280 MtrunA17_Chr1g0186061 64.078 103 37 0 13 115 21 123 2.57e-42 148
Msa1082280 MtrunA17_Chr6g0450101 55.932 118 50 1 1 116 1 118 5.36e-42 146
Msa1082280 MtrunA17_Chr1g0168661 63.462 104 38 0 13 116 22 125 7.43e-42 147
Msa1082280 MtrunA17_Chr8g0354661 61.321 106 41 0 10 115 35 140 7.81e-42 154
Msa1082280 MtrunA17_Chr2g0328771 56.637 113 49 0 12 124 20 132 2.64e-41 147
Msa1082280 MtrunA17_Chr3g0088461 60.185 108 43 0 9 116 19 126 6.24e-41 147
Msa1082280 MtrunA17_Chr1g0194291 55.357 112 50 0 9 120 18 129 1.40e-40 144
Msa1082280 MtrunA17_Chr4g0032401 60.000 105 42 0 12 116 17 121 8.17e-40 144
Msa1082280 MtrunA17_Chr1g0209661 56.190 105 46 0 12 116 27 131 1.03e-39 143
Msa1082280 MtrunA17_Chr3g0099131 61.538 104 40 0 12 115 41 144 2.29e-39 147
Msa1082280 MtrunA17_Chr3g0080861 57.009 107 46 0 10 116 35 141 2.33e-39 146
Msa1082280 MtrunA17_Chr7g0240821 46.479 142 73 1 17 158 6 144 4.67e-39 139
Msa1082280 MtrunA17_Chr1g0203441 56.410 117 50 1 1 116 1 117 8.67e-39 139
Msa1082280 MtrunA17_Chr1g0194301 45.161 155 75 2 12 159 33 184 5.54e-38 137
Msa1082280 MtrunA17_Chr2g0322521 59.813 107 43 0 9 115 26 132 9.41e-38 140
Msa1082280 MtrunA17_Chr5g0417821 57.944 107 45 0 10 116 5 111 1.17e-37 137
Msa1082280 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 4.79e-37 129
Msa1082280 MtrunA17_Chr7g0220341 54.955 111 48 1 10 118 23 133 5.88e-37 135
Msa1082280 MtrunA17_Chr6g0470971 55.357 112 50 0 4 115 6 117 9.86e-37 134
Msa1082280 MtrunA17_Chr1g0154031 57.692 104 44 0 12 115 76 179 1.14e-36 137
Msa1082280 MtrunA17_Chr5g0434931 42.553 141 80 1 11 151 34 173 4.10e-36 132
Msa1082280 MtrunA17_Chr5g0434911 50.893 112 55 0 7 118 16 127 4.47e-36 132
Msa1082280 MtrunA17_Chr1g0180391 59.048 105 43 0 12 116 19 123 5.28e-36 131
Msa1082280 MtrunA17_Chr1g0192411 58.000 100 42 0 10 109 10 109 1.26e-35 134
Msa1082280 MtrunA17_Chr5g0434831 40.936 171 92 3 11 181 6 167 2.12e-35 128
Msa1082280 MtrunA17_Chr7g0228991 51.852 108 52 0 11 118 28 135 8.74e-35 129
Msa1082280 MtrunA17_Chr4g0068921 56.311 103 45 0 12 114 24 126 2.77e-34 125
Msa1082280 MtrunA17_Chr8g0360111 52.427 103 49 0 11 113 24 126 8.81e-34 126
Msa1082280 MtrunA17_Chr2g0293911 53.211 109 51 0 8 116 20 128 9.08e-34 127
Msa1082280 MtrunA17_Chr5g0434841 39.181 171 95 3 11 181 19 180 7.19e-33 125
Msa1082280 MtrunA17_Chr5g0440781 53.535 99 45 1 13 110 13 111 1.11e-32 120
Msa1082280 MtrunA17_Chr5g0440761 53.535 99 45 1 13 110 13 111 3.87e-32 122
Msa1082280 MtrunA17_Chr5g0441141 53.535 99 45 1 13 110 13 111 4.76e-32 122
Msa1082280 MtrunA17_Chr2g0327821 50.476 105 52 0 12 116 6 110 1.23e-31 119
Msa1082280 MtrunA17_Chr7g0247131 64.474 76 27 0 44 119 10 85 1.73e-31 120
Msa1082280 MtrunA17_Chr4g0030881 50.000 110 48 1 13 115 8 117 1.82e-31 119
Msa1082280 MtrunA17_Chr8g0342531 39.752 161 88 3 1 155 1 158 6.39e-31 115
Msa1082280 MtrunA17_Chr8g0342511 56.322 87 38 0 1 87 1 87 1.60e-30 112
Msa1082280 MtrunA17_Chr2g0323321 57.609 92 38 1 1 92 1 91 2.76e-30 112
Msa1082280 MtrunA17_Chr3g0099141 57.471 87 37 0 8 94 36 122 1.26e-29 111
Msa1082280 MtrunA17_Chr5g0441131 50.980 102 49 1 10 110 7 108 2.07e-29 112
Msa1082280 MtrunA17_Chr8g0334881 50.000 104 51 1 12 114 10 113 4.20e-29 115
Msa1082280 MtrunA17_Chr4g0013361 48.148 108 55 1 8 114 6 113 5.23e-29 114
Msa1082280 MtrunA17_Chr8g0342461 54.444 90 40 1 1 89 1 90 1.42e-28 108
Msa1082280 MtrunA17_Chr8g0342471 54.444 90 40 1 1 89 1 90 1.92e-28 108
Msa1082280 MtrunA17_Chr5g0395221 53.409 88 41 0 1 88 1 88 9.66e-28 104
Msa1082280 MtrunA17_Chr4g0053431 52.294 109 51 1 14 122 5 112 2.29e-27 108
Msa1082280 MtrunA17_Chr3g0133601 50.485 103 50 1 14 116 37 138 1.07e-25 103
Msa1082280 MtrunA17_Chr3g0117511 43.089 123 68 2 8 130 177 297 1.36e-24 104
Msa1082280 MtrunA17_Chr4g0008551 51.456 103 47 2 14 115 38 138 3.46e-24 102
Msa1082280 MtrunA17_Chr5g0429661 50.476 105 49 2 12 115 120 222 4.73e-24 101
Msa1082280 MtrunA17_Chr5g0401731 47.170 106 55 1 14 119 15 119 5.18e-24 101
Msa1082280 MtrunA17_Chr6g0454921 44.167 120 57 2 14 124 15 133 6.48e-24 98.2
Msa1082280 MtrunA17_Chr4g0058991 42.742 124 67 3 8 130 203 323 1.93e-23 101
Msa1082280 MtrunA17_Chr5g0425591 50.588 85 41 1 10 93 7 91 3.15e-23 92.8
Msa1082280 MtrunA17_Chr5g0437321 49.495 99 49 1 14 112 19 116 9.18e-23 97.1
Msa1082280 MtrunA17_Chr7g0229101 59.420 69 28 0 44 112 4 72 9.46e-23 95.1
Msa1082280 MtrunA17_Chr7g0229131 52.055 73 35 0 44 116 4 76 1.05e-21 90.9
Msa1082280 MtrunA17_Chr6g0480581 42.574 101 57 1 14 114 4 103 1.42e-21 92.4
Msa1082280 MtrunA17_Chr5g0434901 55.385 65 29 0 48 112 9 73 8.30e-21 87.0
Msa1082280 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 1.94e-20 86.3
Msa1082280 MtrunA17_Chr7g0238631 43.478 115 56 2 12 122 111 220 4.42e-20 91.7
Msa1082280 MtrunA17_Chr3g0093811 48.810 84 40 1 36 116 3 86 5.38e-20 88.6
Msa1082280 MtrunA17_Chr3g0139671 38.739 111 67 1 12 122 83 192 1.04e-19 91.3
Msa1082280 MtrunA17_Chr6g0460661 38.542 96 58 1 14 109 16 110 2.01e-19 84.3
Msa1082280 MtrunA17_Chr1g0157731 36.937 111 69 1 12 122 89 198 2.04e-19 90.1
Msa1082280 MtrunA17_Chr4g0042501 40.351 114 62 3 14 126 105 213 2.80e-18 85.9
Msa1082280 MtrunA17_Chr7g0247141 70.833 48 13 1 1 47 1 48 3.13e-18 78.2
Msa1082280 MtrunA17_Chr7g0238651 31.429 140 93 2 14 150 7 146 3.51e-18 85.1
Msa1082280 MtrunA17_Chr7g0228531 41.509 106 60 2 10 115 216 319 5.38e-18 85.1
Msa1082280 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 7.05e-18 84.7
Msa1082280 MtrunA17_Chr5g0417621 38.211 123 70 3 14 135 134 251 7.14e-18 84.7
Msa1082280 MtrunA17_Chr3g0125801 44.660 103 54 2 14 115 16 116 1.42e-17 82.4
Msa1082280 MtrunA17_Chr7g0228481 41.584 101 57 2 10 110 216 314 1.86e-16 80.5
Msa1082280 MtrunA17_Chr7g0228401 45.349 86 46 1 25 110 290 374 1.88e-16 80.9
Msa1082280 MtrunA17_Chr7g0233061 38.835 103 48 3 14 110 180 273 2.44e-16 79.7
Msa1082280 MtrunA17_Chr6g0460671 39.216 102 61 1 14 115 99 199 3.83e-16 79.0
Msa1082280 MtrunA17_Chr1g0193901 50.000 84 40 2 12 93 11 94 4.45e-16 73.6
Msa1082280 MtrunA17_Chr1g0193891 50.000 84 40 2 12 93 11 94 4.45e-16 73.6
Msa1082280 MtrunA17_Chr1g0193871 50.000 84 40 2 12 93 11 94 4.45e-16 73.6
Msa1082280 MtrunA17_Chr1g0193881 50.000 84 40 2 12 93 11 94 4.45e-16 73.6
Msa1082280 MtrunA17_Chr7g0254261 38.739 111 63 2 9 115 80 189 1.29e-15 77.4
Msa1082280 MtrunA17_Chr1g0177901 43.678 87 48 1 24 110 4 89 1.81e-15 74.7
Msa1082280 MtrunA17_Chr5g0416341 37.398 123 74 3 17 138 29 149 3.14e-15 77.0
Msa1082280 MtrunA17_Chr5g0434871 55.556 45 20 0 74 118 2 46 6.39e-13 63.5
Msa1082280 MtrunA17_Chr8g0362231 34.043 94 61 1 17 110 25 117 9.44e-13 69.3
Msa1082280 MtrunA17_Chr2g0294821 87.097 31 4 0 89 119 5 35 3.82e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1082280 AT5G49330.1 67.052 173 55 1 1 171 1 173 2.45e-76 239
Msa1082280 AT2G47460.1 40.299 402 179 16 1 374 1 369 5.55e-73 232
Msa1082280 AT3G62610.1 72.727 132 36 0 1 132 1 132 3.01e-66 213
Msa1082280 AT2G16720.1 54.118 170 77 1 1 170 1 169 1.43e-60 196
Msa1082280 AT1G35515.1 71.552 116 33 0 1 116 1 116 4.85e-58 188
Msa1082280 AT4G38620.1 71.552 116 33 0 1 116 1 116 9.15e-58 189
Msa1082280 AT4G09460.1 68.067 119 38 0 1 119 1 119 7.08e-57 186
Msa1082280 AT3G61250.1 64.706 119 42 0 1 119 1 119 1.78e-56 187
Msa1082280 AT1G22640.1 60.741 135 52 1 1 135 1 134 3.37e-56 185
Msa1082280 AT2G31180.1 56.863 153 56 3 1 149 1 147 1.03e-55 183
Msa1082280 AT4G34990.1 68.966 116 36 0 1 116 1 116 4.51e-55 182
Msa1082280 AT3G13540.1 59.559 136 54 1 4 139 15 149 8.12e-55 181
Msa1082280 AT5G15310.4 65.517 116 40 0 1 116 1 116 2.60e-54 179
Msa1082280 AT3G02940.2 64.655 116 41 0 1 116 1 116 4.36e-54 181
Msa1082280 AT5G15310.1 65.517 116 40 0 1 116 1 116 7.15e-54 181
Msa1082280 AT3G02940.1 64.655 116 41 0 1 116 1 116 7.91e-54 181
Msa1082280 AT3G02940.3 64.655 116 41 0 1 116 1 116 7.91e-54 181
Msa1082280 AT3G23250.1 52.941 153 67 1 1 153 1 148 8.19e-54 179
Msa1082280 AT5G15310.2 65.517 116 40 0 1 116 1 116 9.16e-54 180
Msa1082280 AT4G28110.1 63.793 116 42 0 1 116 1 116 1.12e-53 179
Msa1082280 AT1G06180.1 57.042 142 57 1 1 142 1 138 1.13e-53 178
Msa1082280 AT3G01140.2 65.517 116 40 0 1 116 1 116 1.84e-53 180
Msa1082280 AT4G21440.1 64.655 116 41 0 1 116 1 116 2.11e-53 180
Msa1082280 AT5G16600.1 67.241 116 38 0 1 116 1 116 4.43e-53 179
Msa1082280 AT1G66230.1 65.517 116 40 0 1 116 1 116 4.98e-53 177
Msa1082280 AT1G16490.1 64.957 117 41 0 2 118 4 120 1.61e-52 176
Msa1082280 AT5G16770.4 64.655 116 41 0 1 116 1 116 1.62e-52 177
Msa1082280 AT5G16770.3 64.655 116 41 0 1 116 1 116 1.62e-52 177
Msa1082280 AT5G16770.1 64.655 116 41 0 1 116 1 116 2.16e-52 177
Msa1082280 AT5G16770.2 64.655 116 41 0 1 116 1 116 2.16e-52 177
Msa1082280 AT4G05100.1 64.957 117 40 1 1 116 1 117 9.31e-52 175
Msa1082280 AT1G79180.1 56.716 134 58 0 2 135 4 137 1.56e-51 174
Msa1082280 AT5G07690.1 65.789 114 39 0 1 114 1 114 4.21e-51 174
Msa1082280 AT1G34670.1 63.793 116 42 0 1 116 1 116 6.87e-51 174
Msa1082280 AT4G17785.2 65.812 117 39 1 1 116 1 117 6.93e-51 174
Msa1082280 AT4G17785.1 65.812 117 39 1 1 116 1 117 8.18e-51 174
Msa1082280 AT4G22680.1 62.931 116 43 0 1 116 1 116 9.23e-51 171
Msa1082280 AT5G61420.2 63.793 116 42 0 1 116 1 116 1.09e-50 174
Msa1082280 AT3G01140.1 64.602 113 40 0 4 116 47 159 2.08e-50 174
Msa1082280 AT1G74650.1 60.000 120 48 0 1 120 1 120 2.51e-50 172
Msa1082280 AT5G65230.1 62.931 116 43 0 1 116 1 116 2.91e-50 171
Msa1082280 AT1G08810.1 61.207 116 45 0 1 116 1 116 3.03e-50 170
Msa1082280 AT5G62470.2 55.970 134 59 0 1 134 1 134 8.77e-50 171
Msa1082280 AT4G12350.1 62.931 116 43 0 1 116 1 116 1.32e-49 169
Msa1082280 AT5G56110.1 63.793 116 42 0 1 116 1 116 6.98e-49 167
Msa1082280 AT3G47600.1 60.345 116 46 0 1 116 1 116 7.07e-49 168
Msa1082280 AT5G26660.1 64.655 116 41 0 1 116 1 116 1.37e-48 168
Msa1082280 AT5G10280.1 62.069 116 44 0 1 116 1 116 1.90e-48 167
Msa1082280 AT5G62470.1 55.970 134 58 1 1 134 1 133 2.24e-48 167
Msa1082280 AT1G56160.1 61.739 115 44 0 2 116 4 118 2.36e-48 166
Msa1082280 AT5G07700.1 61.207 116 45 0 1 116 1 116 3.48e-48 166
Msa1082280 AT5G07700.2 61.207 116 45 0 1 116 1 116 3.48e-48 166
Msa1082280 AT4G01680.3 63.793 116 42 0 1 116 1 116 5.41e-48 163
Msa1082280 AT3G28910.1 61.207 116 45 0 1 116 1 116 6.25e-48 165
Msa1082280 AT5G14340.1 62.069 116 44 0 1 116 13 128 7.48e-48 164
Msa1082280 AT3G13890.2 58.475 118 49 0 1 118 1 118 1.96e-47 165
Msa1082280 AT5G60890.1 60.345 116 46 0 1 116 1 116 2.00e-47 163
Msa1082280 AT4G01680.1 63.793 116 42 0 1 116 1 116 3.45e-47 164
Msa1082280 AT3G12820.1 61.404 114 44 0 3 116 5 118 3.55e-47 160
Msa1082280 AT1G09540.1 64.655 116 41 0 1 116 1 116 5.42e-47 164
Msa1082280 AT1G57560.2 63.793 116 42 0 1 116 1 116 6.87e-47 161
Msa1082280 AT1G57560.1 63.793 116 42 0 1 116 1 116 7.70e-47 162
Msa1082280 AT4G37780.1 55.645 124 54 1 1 123 1 124 1.82e-46 161
Msa1082280 AT1G18570.1 60.684 117 45 1 1 116 1 117 1.91e-46 162
Msa1082280 AT5G54230.1 61.207 116 45 0 1 116 1 116 2.97e-46 160
Msa1082280 AT1G74080.1 61.404 114 44 0 1 114 1 114 6.89e-46 160
Msa1082280 AT1G63910.1 58.621 116 48 0 1 116 1 116 9.21e-46 161
Msa1082280 AT5G62320.1 49.359 156 67 3 2 150 3 153 1.59e-45 157
Msa1082280 AT1G79180.2 49.032 155 46 1 2 123 4 158 3.61e-45 158
Msa1082280 AT3G12720.1 59.292 113 46 0 6 118 16 128 1.19e-44 156
Msa1082280 AT5G14750.1 52.713 129 57 1 13 141 17 141 1.61e-44 152
Msa1082280 AT3G13890.1 54.331 127 49 1 1 118 1 127 2.19e-44 157
Msa1082280 AT5G23000.1 58.120 117 48 1 1 116 1 117 3.79e-44 155
Msa1082280 AT3G49690.1 57.265 117 49 1 1 116 1 117 7.67e-44 154
Msa1082280 AT4G01680.2 57.812 128 42 1 1 116 1 128 8.92e-44 155
Msa1082280 AT2G36890.1 55.462 119 52 1 1 118 1 119 2.14e-43 152
Msa1082280 AT2G36890.2 55.462 119 52 1 1 118 42 160 3.28e-43 153
Msa1082280 AT5G57620.1 57.265 117 49 1 1 116 1 117 4.25e-43 153
Msa1082280 AT5G65790.1 56.410 117 50 1 1 116 1 117 5.88e-43 154
Msa1082280 AT4G13480.1 65.385 104 36 0 13 116 7 110 9.59e-43 150
Msa1082280 AT3G27810.1 54.762 126 57 0 12 137 20 145 1.28e-42 148
Msa1082280 AT2G32460.1 61.111 108 42 0 8 115 14 121 1.37e-42 155
Msa1082280 AT2G32460.2 61.905 105 40 0 11 115 5 109 1.51e-42 155
Msa1082280 AT5G40330.1 58.654 104 43 0 13 116 13 116 2.12e-42 147
Msa1082280 AT3G24310.1 62.963 108 40 0 11 118 17 124 2.48e-42 149
Msa1082280 AT5G35550.1 62.857 105 39 0 12 116 14 118 2.55e-42 149
Msa1082280 AT5G12870.1 61.905 105 40 0 12 116 18 122 2.85e-42 149
Msa1082280 AT3G08500.1 61.111 108 42 0 9 116 27 134 7.33e-42 150
Msa1082280 AT3G28470.1 58.182 110 46 0 1 110 1 110 7.43e-42 149
Msa1082280 AT3G01530.1 48.667 150 75 1 12 159 25 174 1.69e-41 145
Msa1082280 AT5G55020.1 61.905 105 40 0 10 114 24 128 2.12e-41 152
Msa1082280 AT5G40350.1 57.522 113 48 0 12 124 17 129 3.24e-41 144
Msa1082280 AT1G74430.1 56.897 116 50 0 1 116 1 116 1.29e-40 144
Msa1082280 AT3G27920.1 47.826 138 66 1 13 150 15 146 1.61e-40 143
Msa1082280 AT5G06100.1 59.048 105 43 0 11 115 31 135 3.48e-40 148
Msa1082280 AT3G11440.2 61.538 104 40 0 12 115 41 144 4.48e-40 148
Msa1082280 AT5G52600.1 57.143 112 48 0 9 120 9 120 5.29e-40 141
Msa1082280 AT3G30210.1 59.615 104 42 0 11 114 26 129 9.81e-40 142
Msa1082280 AT5G06100.5 59.048 105 43 0 11 115 31 135 1.30e-39 147
Msa1082280 AT5G06100.2 59.048 105 43 0 11 115 31 135 1.30e-39 147
Msa1082280 AT5G06100.3 59.048 105 43 0 11 115 31 135 1.30e-39 147
Msa1082280 AT5G06100.4 59.048 105 43 0 11 115 31 135 1.30e-39 147
Msa1082280 AT3G11440.3 61.538 104 40 0 12 115 41 144 1.73e-39 147
Msa1082280 AT3G11440.4 61.538 104 40 0 12 115 41 144 1.73e-39 147
Msa1082280 AT3G11440.1 61.538 104 40 0 12 115 41 144 1.73e-39 147
Msa1082280 AT1G48000.1 48.485 132 65 1 10 141 30 158 1.08e-38 139
Msa1082280 AT1G66370.1 53.913 115 49 1 1 115 1 111 2.03e-38 138
Msa1082280 AT1G68320.1 55.238 105 47 0 12 116 19 123 3.70e-38 139
Msa1082280 AT1G18710.1 52.586 116 55 0 1 116 1 116 6.68e-38 137
Msa1082280 AT4G26930.1 57.143 105 45 0 10 114 17 121 9.72e-38 140
Msa1082280 AT2G47190.1 52.212 113 54 0 8 120 16 128 1.36e-37 137
Msa1082280 AT1G25340.1 54.808 104 47 0 13 116 19 122 1.40e-37 137
Msa1082280 AT1G66380.1 59.048 105 43 0 11 115 7 111 7.24e-37 130
Msa1082280 AT4G25560.1 60.194 103 41 0 13 115 11 113 9.45e-37 135
Msa1082280 AT1G56650.1 58.095 105 44 0 11 115 7 111 4.59e-36 132
Msa1082280 AT3G06490.1 57.798 109 46 0 8 116 15 123 1.21e-35 133
Msa1082280 AT2G26960.1 52.830 106 50 0 9 114 17 122 8.45e-35 133
Msa1082280 AT1G66390.1 57.143 105 45 0 11 115 7 111 1.08e-34 128
Msa1082280 AT5G52260.1 57.282 103 44 0 13 115 13 115 2.21e-34 128
Msa1082280 AT3G48920.1 53.846 104 48 0 13 116 19 122 4.03e-34 127
Msa1082280 AT5G59780.3 52.381 105 50 0 12 116 8 112 8.90e-34 125
Msa1082280 AT3G46130.1 52.830 106 50 0 11 116 8 113 1.06e-33 126
Msa1082280 AT1G25340.2 51.923 104 45 1 13 116 19 117 2.15e-33 125
Msa1082280 AT3G53200.1 57.692 104 44 0 12 115 9 112 2.23e-33 124
Msa1082280 AT1G25340.3 51.923 104 45 1 13 116 19 117 3.50e-33 126
Msa1082280 AT5G49620.1 52.212 113 54 0 8 120 22 134 5.98e-33 125
Msa1082280 AT5G26660.2 72.222 72 20 0 45 116 14 85 9.85e-31 119
Msa1082280 AT5G14750.3 50.980 102 43 2 40 141 13 107 2.63e-30 114
Msa1082280 AT3G27810.2 55.914 93 41 0 45 137 4 96 1.07e-29 113
Msa1082280 AT3G60460.1 48.624 109 55 1 7 114 6 114 1.50e-29 116
Msa1082280 AT5G49620.2 46.457 127 54 1 8 120 22 148 2.67e-29 115
Msa1082280 AT5G35550.2 69.444 72 22 0 45 116 50 121 7.68e-29 113
Msa1082280 AT3G12820.2 65.714 70 24 0 47 116 1 70 1.08e-28 110
Msa1082280 AT5G40350.2 58.537 82 34 0 43 124 3 84 2.46e-28 109
Msa1082280 AT2G26950.1 46.226 106 57 0 9 114 13 118 4.68e-28 113
Msa1082280 AT3G46130.3 60.274 73 29 0 44 116 9 81 6.05e-26 104
Msa1082280 AT5G59780.2 61.111 72 28 0 45 116 20 91 6.21e-26 103
Msa1082280 AT3G47600.2 62.500 72 27 0 45 116 39 110 6.59e-26 106
Msa1082280 AT3G53200.2 66.197 71 24 0 45 115 9 79 8.70e-26 103
Msa1082280 AT3G46130.4 61.111 72 28 0 45 116 20 91 1.63e-25 103
Msa1082280 AT2G39880.1 52.830 106 41 2 14 115 50 150 1.85e-24 103
Msa1082280 AT4G18770.1 43.802 121 62 3 8 126 211 327 1.88e-24 104
Msa1082280 AT3G09230.1 47.273 110 49 2 14 119 55 159 4.08e-24 102
Msa1082280 AT3G55730.1 45.161 124 67 1 14 137 56 178 7.52e-24 102
Msa1082280 AT3G27785.1 45.217 115 57 3 8 120 183 293 7.57e-24 102
Msa1082280 AT1G66380.3 61.111 72 28 0 44 115 7 78 2.03e-23 94.0
Msa1082280 AT5G40360.1 43.119 109 60 2 12 120 156 262 2.80e-23 100
Msa1082280 AT4G37260.1 46.018 113 59 2 14 126 13 123 5.07e-23 98.6
Msa1082280 AT1G22640.3 59.459 74 29 1 58 131 1 73 6.34e-23 95.5
Msa1082280 AT1G18960.1 44.660 103 54 2 14 116 10 109 7.67e-23 97.8
Msa1082280 AT5G67300.1 44.000 125 63 3 14 136 6 125 1.41e-22 97.1
Msa1082280 AT2G23290.1 48.039 102 52 1 14 115 13 113 1.76e-22 97.1
Msa1082280 AT5G58850.1 47.619 105 52 2 12 115 103 205 2.45e-22 98.2
Msa1082280 AT1G69560.1 36.301 146 87 3 9 153 102 242 3.85e-22 96.3
Msa1082280 AT1G69560.2 36.301 146 87 3 9 153 118 258 5.14e-22 96.3
Msa1082280 AT3G50060.1 48.039 102 52 1 14 115 6 106 6.15e-22 95.1
Msa1082280 AT1G66380.2 52.381 84 40 0 11 94 7 90 6.36e-22 90.1
Msa1082280 AT3G09370.2 41.538 130 67 2 12 137 133 257 2.42e-21 95.9
Msa1082280 AT5G02320.1 40.458 131 69 2 12 138 125 250 2.80e-21 95.9
Msa1082280 AT5G02320.2 40.458 131 69 2 12 138 125 250 2.80e-21 95.9
Msa1082280 AT5G02320.3 40.458 131 69 2 12 138 65 190 3.02e-21 95.5
Msa1082280 AT3G09370.1 41.538 130 67 2 12 137 128 252 3.03e-21 95.5
Msa1082280 AT3G09370.3 41.538 130 67 2 12 137 141 265 3.36e-21 95.5
Msa1082280 AT5G11050.1 42.975 121 65 3 14 133 105 222 1.25e-20 93.2
Msa1082280 AT5G14750.4 45.238 84 42 1 58 141 1 80 2.40e-20 86.7
Msa1082280 AT5G14750.2 45.238 84 42 1 58 141 1 80 2.40e-20 86.7
Msa1082280 AT5G11510.3 40.000 110 61 2 12 119 79 185 4.66e-20 92.4
Msa1082280 AT5G11510.1 40.000 110 61 2 12 119 79 185 4.66e-20 92.4
Msa1082280 AT5G11510.4 40.000 110 61 2 12 119 79 185 4.66e-20 92.4
Msa1082280 AT5G11510.2 40.000 110 61 2 12 119 79 185 6.67e-20 92.0
Msa1082280 AT1G71030.2 47.059 85 45 0 51 135 5 89 6.93e-20 86.7
Msa1082280 AT5G11510.5 40.000 110 61 2 12 119 79 185 7.59e-20 91.7
Msa1082280 AT1G71030.1 47.059 85 45 0 51 135 19 103 7.95e-20 87.0
Msa1082280 AT1G17950.1 41.176 102 59 1 14 115 5 105 1.36e-19 87.4
Msa1082280 AT3G23250.2 53.968 63 29 0 58 120 1 63 8.26e-19 84.7
Msa1082280 AT1G26780.2 39.655 116 64 3 12 126 96 206 1.95e-18 86.3
Msa1082280 AT1G26780.1 39.655 116 64 3 12 126 96 206 2.47e-18 84.7
Msa1082280 AT5G17800.1 39.806 103 61 1 14 116 93 194 3.05e-18 85.1
Msa1082280 AT4G32730.1 36.036 111 70 1 12 122 85 194 3.48e-18 86.7
Msa1082280 AT4G32730.5 36.036 111 70 1 12 122 85 194 3.84e-18 86.7
Msa1082280 AT4G32730.4 36.036 111 70 1 12 122 85 194 3.84e-18 86.7
Msa1082280 AT4G32730.3 36.036 111 70 1 12 122 85 194 3.84e-18 86.7
Msa1082280 AT4G32730.2 36.036 111 70 1 12 122 85 194 3.84e-18 86.7
Msa1082280 AT2G25230.1 35.714 140 87 3 8 146 20 157 3.89e-18 83.2
Msa1082280 AT3G29020.1 38.053 113 66 2 14 126 65 173 3.90e-18 83.2
Msa1082280 AT3G29020.2 38.053 113 66 2 14 126 67 175 4.55e-18 84.3
Msa1082280 AT4G33450.1 37.209 129 74 3 3 130 13 135 5.30e-18 83.2
Msa1082280 AT4G00540.2 40.179 112 63 2 11 119 100 210 3.67e-17 82.8
Msa1082280 AT4G00540.1 40.179 112 63 2 11 119 98 208 4.76e-17 82.8
Msa1082280 AT1G73410.1 42.308 104 57 2 14 116 6 107 5.80e-17 80.1
Msa1082280 AT1G73410.2 42.308 104 57 2 14 116 6 107 6.42e-17 79.0
Msa1082280 AT2G37630.1 36.082 97 60 1 14 108 4 100 4.07e-16 79.3
Msa1082280 AT5G40430.1 34.815 135 84 4 7 140 47 178 8.50e-15 73.9
Msa1082280 AT2G02820.3 37.234 94 58 1 17 110 33 125 2.10e-14 73.9
Msa1082280 AT5G39700.1 35.294 102 65 1 15 116 57 157 2.95e-14 71.2
Msa1082280 AT2G02820.1 37.234 94 58 1 17 110 33 125 3.08e-14 74.3
Msa1082280 AT2G02820.2 37.234 94 58 1 17 110 33 125 3.16e-14 74.3
Msa1082280 AT4G25560.2 67.391 46 15 0 70 115 2 47 4.35e-14 71.2
Msa1082280 AT1G14350.2 34.211 114 73 2 17 130 28 139 4.51e-14 73.6
Msa1082280 AT1G14350.1 34.211 114 73 2 17 130 28 139 4.51e-14 73.6
Msa1082280 AT5G59780.1 55.319 47 21 0 70 116 1 47 5.35e-13 67.0
Msa1082280 AT3G46130.2 55.319 47 21 0 70 116 1 47 1.74e-12 66.2
Msa1082280 AT5G61420.1 69.444 36 11 0 81 116 2 37 4.48e-11 63.5
Msa1082280 AT1G74650.3 54.545 44 20 0 77 120 1 44 5.19e-11 62.8
Msa1082280 AT3G28910.2 62.500 40 15 0 77 116 1 40 5.42e-11 62.8

Find 93 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTATGTCTTTGATATTAT+TGG 0.051772 7_2:+82321194 None:intergenic
CACGGTAATTGCAACCTATT+TGG 0.105295 7_2:+82320964 None:intergenic
AGCAAAATGCTTTGGTTTCT+TGG 0.128450 7_2:-82320492 Msa1082280:CDS
TTGCAGCAGGTTCACTTCTT+TGG 0.173439 7_2:+82321076 None:intergenic
ATATCGTTTGTTCTTCTTCA+TGG 0.266279 7_2:+82321104 None:intergenic
ATGGTTATGGGCTCAGTAAA+TGG 0.270999 7_2:-82321012 Msa1082280:CDS
AGGCAAATGGGGAAGGTTCT+TGG 0.278979 7_2:-82323080 Msa1082280:CDS
GTCAAGATGCATGCTTCTTT+TGG 0.280452 7_2:-82322839 Msa1082280:CDS
TGCAGCAGGTTCACTTCTTT+GGG 0.310563 7_2:+82321077 None:intergenic
TGATATTATCATGGATACTT+TGG 0.310884 7_2:-82320842 Msa1082280:CDS
ACTCAATATGTTAAGGCAAA+TGG 0.322680 7_2:-82323093 Msa1082280:CDS
CTCAATATGTTAAGGCAAAT+GGG 0.326456 7_2:-82323092 Msa1082280:CDS
TCTTCAACTTCAAAGACTTC+GGG 0.340198 7_2:-82320673 Msa1082280:CDS
TGCACTAGAGAACGAGAAAA+TGG 0.352444 7_2:-82321031 Msa1082280:CDS
AGTTCTACCACCTTTACGTT+TGG 0.362051 7_2:+82321137 None:intergenic
AGAGAACGAGAAAATGGTTA+TGG 0.377024 7_2:-82321025 Msa1082280:CDS
ACGGTAATTGCAACCTATTT+GGG 0.383543 7_2:+82320965 None:intergenic
TCCTCAGAAGCAAAATGCTT+TGG 0.387350 7_2:-82320500 Msa1082280:CDS
GTTCTACCACCTTTACGTTT+GGG 0.399753 7_2:+82321138 None:intergenic
GACAAAGGCACCAACACAAA+TGG 0.402236 7_2:-82320757 Msa1082280:CDS
TTCTTCAACTTCAAAGACTT+CGG 0.422667 7_2:-82320674 Msa1082280:CDS
ATCTCGTTGTCTGTTCTGCC+TGG 0.428368 7_2:+82321300 None:intergenic
ATTTGAGAGCTGATCTCAAA+AGG 0.432934 7_2:-82322895 Msa1082280:CDS
TTTCGATGATAACTTGGATT+GGG 0.437238 7_2:-82320650 Msa1082280:CDS
CTCGTTCTCTAGTGCAGGGG+TGG 0.446834 7_2:+82321038 None:intergenic
GTAAAAGTTGTAGATTAAGA+TGG 0.447825 7_2:-82322925 Msa1082280:CDS
TATAATTTGTTGATGTTCCT+CGG 0.454287 7_2:+82321232 None:intergenic
AAACATGCTAACTTGGTTGT+TGG 0.455589 7_2:-82320569 Msa1082280:CDS
TGAGAAAGTGGGTTTGAAGA+AGG 0.456681 7_2:-82323148 Msa1082280:CDS
TTTGAGAGCTGATCTCAAAA+GGG 0.462390 7_2:-82322894 Msa1082280:CDS
TTCGGGTTTCGATGATAACT+TGG 0.466159 7_2:-82320656 Msa1082280:CDS
GAGAAAGTGGGTTTGAAGAA+GGG 0.470856 7_2:-82323147 Msa1082280:CDS
AGCTCCTTGTTGTGAGAAAG+TGG 0.474506 7_2:-82323160 Msa1082280:CDS
ACCAACACAAATGGAACAAA+GGG 0.476941 7_2:-82320748 Msa1082280:CDS
GAGAACGAGAAAATGGTTAT+GGG 0.478560 7_2:-82321024 Msa1082280:CDS
GCCCTTTGTTCCATTTGTGT+TGG 0.479392 7_2:+82320747 None:intergenic
TGGTTATGGGCTCAGTAAAT+GGG 0.483957 7_2:-82321011 Msa1082280:CDS
GGGAAATATTTCTTCTGAAG+AGG 0.485325 7_2:-82322873 Msa1082280:CDS
TGGCAAGTGACTTGCAATCA+AGG 0.485450 7_2:+82321320 None:intergenic
CCTTGTTCTAGTGGTGAAGA+TGG 0.485510 7_2:-82320988 Msa1082280:CDS
TTCTCTAGTGCAGGGGTGGG+TGG 0.491074 7_2:+82321042 None:intergenic
TCATTAATGACCTTCAGATC+TGG 0.498872 7_2:+82320886 None:intergenic
AAGATGAAAACATGCTAACT+TGG 0.500426 7_2:-82320576 Msa1082280:CDS
GTTGATTGTGACCGTATGTT+GGG 0.500866 7_2:-82320910 Msa1082280:CDS
TTGCAATTACCGTGCATTGA+CGG 0.501154 7_2:-82320955 Msa1082280:CDS
GTTTCGATGATAACTTGGAT+TGG 0.503745 7_2:-82320651 Msa1082280:CDS
TTGATTGCAAGTCACTTGCC+AGG 0.505909 7_2:-82321318 Msa1082280:CDS
GTGGTGAAGATGGCCCAAAT+AGG 0.508419 7_2:-82320978 Msa1082280:CDS
TATTATCATGGATACTTTGG+AGG 0.511480 7_2:-82320839 Msa1082280:CDS
GGTTGTTGGATGATGATCAA+TGG 0.513716 7_2:-82320555 Msa1082280:CDS
GAAAGGTCAATCGTTGTTGT+GGG 0.516251 7_2:-82320602 Msa1082280:CDS
TATCATGGATACTTTGGAGG+TGG 0.519349 7_2:-82320836 Msa1082280:CDS
GTTGTTGGATGATGATCAAT+GGG 0.519759 7_2:-82320554 Msa1082280:CDS
GGATGATGATCAATGGGAAA+AGG 0.520555 7_2:-82320548 Msa1082280:CDS
ATGCCATTGTTGAATCAGAA+AGG 0.524551 7_2:-82320619 Msa1082280:CDS
TCAACTATGATTCCTTCTGA+TGG 0.529241 7_2:+82321168 None:intergenic
AGAAAGGTCAATCGTTGTTG+TGG 0.533000 7_2:-82320603 Msa1082280:CDS
GATCTGAAGGTCATTAATGA+TGG 0.535184 7_2:-82320883 Msa1082280:CDS
GTAAATGGGCCTTGTTCTAG+TGG 0.541272 7_2:-82320997 Msa1082280:CDS
TGGGTTTGAAGAAGGGAAGA+TGG 0.549753 7_2:-82323140 Msa1082280:CDS
TCGTTCTCTAGTGCAGGGGT+GGG 0.551326 7_2:+82321039 None:intergenic
TTTGAAGGTTTGCTTAGATG+TGG 0.554593 7_2:-82322947 Msa1082280:intron
CACCAACACAAATGGAACAA+AGG 0.555866 7_2:-82320749 Msa1082280:CDS
GACATAGAGATTCCATCAGA+AGG 0.558017 7_2:-82321180 Msa1082280:CDS
ACTGGAACTCACACTTGAGT+AGG 0.564912 7_2:-82321269 Msa1082280:CDS
TCAGATCTGGTCCCAACATA+CGG 0.570710 7_2:+82320899 None:intergenic
GGGAAGATGGACCGCAGAGG+AGG 0.573236 7_2:-82323127 Msa1082280:CDS
GATACACCTCCCAAACGTAA+AGG 0.576000 7_2:-82321147 Msa1082280:CDS
TATGTTAAGGCAAATGGGGA+AGG 0.579281 7_2:-82323087 Msa1082280:CDS
GGAAGTGTAACAATTGCAGC+AGG 0.585780 7_2:+82321063 None:intergenic
CAAATGGGGAAGGTTCTTGG+AGG 0.590009 7_2:-82323077 Msa1082280:CDS
AGTTGATTGTGACCGTATGT+TGG 0.594858 7_2:-82320911 Msa1082280:CDS
TGACCTTTCTGATTCAACAA+TGG 0.599595 7_2:+82320616 None:intergenic
CCATCTTCACCACTAGAACA+AGG 0.602002 7_2:+82320988 None:intergenic
TCAATATGTTAAGGCAAATG+GGG 0.603717 7_2:-82323091 Msa1082280:CDS
AGAAAGTAATGATGAAAATG+TGG 0.603870 7_2:-82320803 Msa1082280:CDS
GACGAATCAATGTTCGAATG+AGG 0.609950 7_2:-82320704 Msa1082280:CDS
GCTCCTTGTTGTGAGAAAGT+GGG 0.610413 7_2:-82323159 Msa1082280:CDS
AAGGTGGTAGAACTAGTCGA+TGG 0.610817 7_2:-82321128 Msa1082280:CDS
AGGAAAGTTTACAGCTTCCG+AGG 0.615687 7_2:-82321249 Msa1082280:CDS
TTGAGAGCTGATCTCAAAAG+GGG 0.619723 7_2:-82322893 Msa1082280:CDS
CTACCACCTTTACGTTTGGG+AGG 0.625375 7_2:+82321141 None:intergenic
GGTTGTGATTAATGAAAGAG+TGG 0.625942 7_2:-82320782 Msa1082280:CDS
AGGTGGTAGAACTAGTCGAT+GGG 0.629904 7_2:-82321127 Msa1082280:CDS
AAACCCACTTTCTCACAACA+AGG 0.632503 7_2:+82323156 None:intergenic
TTTCTCGTTCTCTAGTGCAG+GGG 0.641292 7_2:+82321035 None:intergenic
TATGTTGGGACCAGATCTGA+AGG 0.647079 7_2:-82320896 Msa1082280:CDS
CAAAATTTCATCCTCCTCTG+CGG 0.659354 7_2:+82323116 None:intergenic
TTGTGATTAATGAAAGAGTG+GGG 0.673933 7_2:-82320780 Msa1082280:CDS
GTTGTGATTAATGAAAGAGT+GGG 0.684483 7_2:-82320781 Msa1082280:CDS
ACACCTCCCAAACGTAAAGG+TGG 0.689755 7_2:-82321144 Msa1082280:CDS
GAAGGGAAGATGGACCGCAG+AGG 0.690611 7_2:-82323130 Msa1082280:CDS
TGTGATTAATGAAAGAGTGG+GGG 0.736683 7_2:-82320779 Msa1082280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTATAATTTTTTTTAT+AGG - chr7_2:82321699-82321718 Msa1082280:intron 0.0%
!!! AAATTATAATTTTTTTTATA+GGG - chr7_2:82321700-82321719 Msa1082280:intron 0.0%
!! TCTCAAAAAAATAATATTTA+AGG + chr7_2:82320852-82320871 None:intergenic 10.0%
!!! CTATAAAATGAAATTTTTTA+TGG - chr7_2:82321077-82321096 Msa1082280:CDS 10.0%
!!! TTAAAAATGTTTTGTTTTTT+AGG + chr7_2:82321943-82321962 None:intergenic 10.0%
!! ATAAAAACAAAACAAGAAAA+CGG + chr7_2:82320663-82320682 None:intergenic 15.0%
!! TTGTCAAAAACAAATAATAA+AGG + chr7_2:82320999-82321018 None:intergenic 15.0%
!!! ATTATTTGTTTTTGACAAAA+TGG - chr7_2:82321001-82321020 Msa1082280:CDS 15.0%
!! TATTTAATGCATTGTAATTA+AGG - chr7_2:82321246-82321265 Msa1082280:CDS 15.0%
!! ATTTAATGCATTGTAATTAA+GGG - chr7_2:82321247-82321266 Msa1082280:CDS 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr7_2:82321729-82321748 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr7_2:82321728-82321747 None:intergenic 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG + chr7_2:82321478-82321497 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr7_2:82321513-82321532 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr7_2:82321644-82321663 Msa1082280:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr7_2:82321728-82321747 Msa1082280:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr7_2:82321729-82321748 Msa1082280:intron 15.0%
!! ATGTCAAATATTACAAATTA+GGG + chr7_2:82321803-82321822 None:intergenic 15.0%
!! AATGTCAAATATTACAAATT+AGG + chr7_2:82321804-82321823 None:intergenic 15.0%
!!! TTTTATTTTCTCTCTATATA+TGG - chr7_2:82321870-82321889 Msa1082280:intron 15.0%
!!! TAGTCTATTACTTTATTTAT+GGG + chr7_2:82322267-82322286 None:intergenic 15.0%
!!! AGATTTTAATGATATTATCA+TGG - chr7_2:82322803-82322822 Msa1082280:intron 15.0%
!!! AATTTTGACTCAATATGTTA+AGG - chr7_2:82320554-82320573 Msa1082280:CDS 20.0%
!!! ATATAACCGACATTTTATTT+TGG - chr7_2:82320681-82320700 Msa1082280:CDS 20.0%
!!! TATAACCGACATTTTATTTT+GGG - chr7_2:82320682-82320701 Msa1082280:CDS 20.0%
!! AGTGCAAAAAAACAAAATTA+GGG + chr7_2:82321350-82321369 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr7_2:82321383-82321402 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr7_2:82321384-82321403 None:intergenic 20.0%
!!! TAATCAAACTTTGTTTTAAC+AGG - chr7_2:82321672-82321691 Msa1082280:intron 20.0%
!!! AATCAAACTTTGTTTTAACA+GGG - chr7_2:82321673-82321692 Msa1082280:intron 20.0%
!!! CTAGTCTATTACTTTATTTA+TGG + chr7_2:82322268-82322287 None:intergenic 20.0%
!!! TTTTTTTCCCTTTTGCTAAT+AGG - chr7_2:82320635-82320654 Msa1082280:CDS 25.0%
!!! TTTTTTCCCTTTTGCTAATA+GGG - chr7_2:82320636-82320655 Msa1082280:CDS 25.0%
!!! ATAACCGACATTTTATTTTG+GGG - chr7_2:82320683-82320702 Msa1082280:CDS 25.0%
! GTAAAAGTTGTAGATTAAGA+TGG - chr7_2:82320729-82320748 Msa1082280:CDS 25.0%
! TTGAGATTTACTTCCATATT+TGG - chr7_2:82320866-82320885 Msa1082280:CDS 25.0%
!!! ATGATCTGTTTTTCCAAATA+TGG + chr7_2:82320882-82320901 None:intergenic 25.0%
! AATAAACAGAATTTCTCATG+GGG + chr7_2:82320908-82320927 None:intergenic 25.0%
! CAATAAACAGAATTTCTCAT+GGG + chr7_2:82320909-82320928 None:intergenic 25.0%
! TCAATAAACAGAATTTCTCA+TGG + chr7_2:82320910-82320929 None:intergenic 25.0%
! TAGTAAGAAGAAATTAAGCA+CGG - chr7_2:82320944-82320963 Msa1082280:CDS 25.0%
!!! TTTGTTTTTGACAAAATGGA+AGG - chr7_2:82321005-82321024 Msa1082280:CDS 25.0%
!!! TTGTTTTTGACAAAATGGAA+GGG - chr7_2:82321006-82321025 Msa1082280:CDS 25.0%
! TTAGTATGCAGTCAATTTAA+GGG + chr7_2:82321116-82321135 None:intergenic 25.0%
!!! AGTGGGTTTTTTTTTTTTGA+TGG - chr7_2:82321139-82321158 Msa1082280:CDS 25.0%
!!! GTGGGTTTTTTTTTTTTGAT+GGG - chr7_2:82321140-82321159 Msa1082280:CDS 25.0%
! CAGTGCAAAAAAACAAAATT+AGG + chr7_2:82321351-82321370 None:intergenic 25.0%
!! TTTTTCTTTTCTAATGAGAC+AGG + chr7_2:82321978-82321997 None:intergenic 25.0%
! ACTAGAAAATGAAATGACAA+AGG - chr7_2:82322283-82322302 Msa1082280:intron 25.0%
!! AATGAAATGACAAAGGTTTT+TGG - chr7_2:82322290-82322309 Msa1082280:intron 25.0%
!!! TATAATTTGTTGATGTTCCT+CGG + chr7_2:82322425-82322444 None:intergenic 25.0%
! CTCTATGTCTTTGATATTAT+TGG + chr7_2:82322463-82322482 None:intergenic 25.0%
! TGATATTATCATGGATACTT+TGG - chr7_2:82322812-82322831 Msa1082280:intron 25.0%
! AGAAAGTAATGATGAAAATG+TGG - chr7_2:82322851-82322870 Msa1082280:CDS 25.0%
ACTCAATATGTTAAGGCAAA+TGG - chr7_2:82320561-82320580 Msa1082280:CDS 30.0%
CTCAATATGTTAAGGCAAAT+GGG - chr7_2:82320562-82320581 Msa1082280:CDS 30.0%
TCAATATGTTAAGGCAAATG+GGG - chr7_2:82320563-82320582 Msa1082280:CDS 30.0%
! ATAGTGATACCTGCATTTTT+GGG + chr7_2:82320609-82320628 None:intergenic 30.0%
! AATAGTGATACCTGCATTTT+TGG + chr7_2:82320610-82320629 None:intergenic 30.0%
!!! TAACCGACATTTTATTTTGG+GGG - chr7_2:82320684-82320703 Msa1082280:CDS 30.0%
AAACCCCCAAAATAAAATGT+CGG + chr7_2:82320690-82320709 None:intergenic 30.0%
!!! ATTTTATTTTGGGGGTTTGA+AGG - chr7_2:82320692-82320711 Msa1082280:CDS 30.0%
CTTAGTATGCAGTCAATTTA+AGG + chr7_2:82321117-82321136 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr7_2:82321760-82321779 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr7_2:82321759-82321778 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr7_2:82321610-82321629 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr7_2:82321759-82321778 Msa1082280:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr7_2:82321760-82321779 Msa1082280:intron 30.0%
!! ATGATATGTTTTTGTCGAAG+TGG - chr7_2:82322040-82322059 Msa1082280:intron 30.0%
ATCTCTTGAATAGTAACGAA+TGG - chr7_2:82322079-82322098 Msa1082280:intron 30.0%
!! ATTTTTCTTTTTCGTGACAG+TGG + chr7_2:82322132-82322151 None:intergenic 30.0%
CAATTGAAGCAAAATACACA+AGG + chr7_2:82322227-82322246 None:intergenic 30.0%
ACAACGAGATTAAAAACTAC+TGG - chr7_2:82322367-82322386 Msa1082280:intron 30.0%
ATATCGTTTGTTCTTCTTCA+TGG + chr7_2:82322553-82322572 None:intergenic 30.0%
TATTATCATGGATACTTTGG+AGG - chr7_2:82322815-82322834 Msa1082280:intron 30.0%
GTTGTGATTAATGAAAGAGT+GGG - chr7_2:82322873-82322892 Msa1082280:CDS 30.0%
TTGTGATTAATGAAAGAGTG+GGG - chr7_2:82322874-82322893 Msa1082280:CDS 30.0%
TTCTTCAACTTCAAAGACTT+CGG - chr7_2:82322980-82322999 Msa1082280:intron 30.0%
TTTCGATGATAACTTGGATT+GGG - chr7_2:82323004-82323023 Msa1082280:intron 30.0%
AAGATGAAAACATGCTAACT+TGG - chr7_2:82323078-82323097 Msa1082280:CDS 30.0%
! TTTGAAGGTTTGCTTAGATG+TGG - chr7_2:82320707-82320726 Msa1082280:CDS 35.0%
ATTTGAGAGCTGATCTCAAA+AGG - chr7_2:82320759-82320778 Msa1082280:CDS 35.0%
TTTGAGAGCTGATCTCAAAA+GGG - chr7_2:82320760-82320779 Msa1082280:CDS 35.0%
! GGGAAATATTTCTTCTGAAG+AGG - chr7_2:82320781-82320800 Msa1082280:CDS 35.0%
! TAAAATTCTCAGAGTGTCAG+AGG + chr7_2:82321200-82321219 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr7_2:82321744-82321763 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr7_2:82321744-82321763 Msa1082280:intron 35.0%
AAAAATTGTTAACGCGTGCT+CGG + chr7_2:82321848-82321867 None:intergenic 35.0%
!!! TGACAAAGGTTTTTGGCTTT+TGG - chr7_2:82322297-82322316 Msa1082280:intron 35.0%
!!! TTTTGGCTTTTGGTAACTTC+AGG - chr7_2:82322307-82322326 Msa1082280:intron 35.0%
TCAACTATGATTCCTTCTGA+TGG + chr7_2:82322489-82322508 None:intergenic 35.0%
AGAGAACGAGAAAATGGTTA+TGG - chr7_2:82322629-82322648 Msa1082280:intron 35.0%
GAGAACGAGAAAATGGTTAT+GGG - chr7_2:82322630-82322649 Msa1082280:intron 35.0%
ACGGTAATTGCAACCTATTT+GGG + chr7_2:82322692-82322711 None:intergenic 35.0%
! TTATTTTCACCGTCAATGCA+CGG + chr7_2:82322711-82322730 None:intergenic 35.0%
TCATTAATGACCTTCAGATC+TGG + chr7_2:82322771-82322790 None:intergenic 35.0%
GATCTGAAGGTCATTAATGA+TGG - chr7_2:82322771-82322790 Msa1082280:intron 35.0%
GGTTGTGATTAATGAAAGAG+TGG - chr7_2:82322872-82322891 Msa1082280:CDS 35.0%
TGTGATTAATGAAAGAGTGG+GGG - chr7_2:82322875-82322894 Msa1082280:CDS 35.0%
ACCAACACAAATGGAACAAA+GGG - chr7_2:82322906-82322925 Msa1082280:CDS 35.0%
TCTTCAACTTCAAAGACTTC+GGG - chr7_2:82322981-82323000 Msa1082280:intron 35.0%
GTTTCGATGATAACTTGGAT+TGG - chr7_2:82323003-82323022 Msa1082280:intron 35.0%
ATGCCATTGTTGAATCAGAA+AGG - chr7_2:82323035-82323054 Msa1082280:intron 35.0%
TGACCTTTCTGATTCAACAA+TGG + chr7_2:82323041-82323060 None:intergenic 35.0%
AAACATGCTAACTTGGTTGT+TGG - chr7_2:82323085-82323104 Msa1082280:CDS 35.0%
GTTGTTGGATGATGATCAAT+GGG - chr7_2:82323100-82323119 Msa1082280:CDS 35.0%
! AGCAAAATGCTTTGGTTTCT+TGG - chr7_2:82323162-82323181 Msa1082280:CDS 35.0%
AAACCCACTTTCTCACAACA+AGG + chr7_2:82320501-82320520 None:intergenic 40.0%
! TGAGAAAGTGGGTTTGAAGA+AGG - chr7_2:82320506-82320525 Msa1082280:CDS 40.0%
! GAGAAAGTGGGTTTGAAGAA+GGG - chr7_2:82320507-82320526 Msa1082280:CDS 40.0%
CAAAATTTCATCCTCCTCTG+CGG + chr7_2:82320541-82320560 None:intergenic 40.0%
TATGTTAAGGCAAATGGGGA+AGG - chr7_2:82320567-82320586 Msa1082280:CDS 40.0%
AACGGTCCCTATTAGCAAAA+GGG + chr7_2:82320645-82320664 None:intergenic 40.0%
AAACGGTCCCTATTAGCAAA+AGG + chr7_2:82320646-82320665 None:intergenic 40.0%
TTGAGAGCTGATCTCAAAAG+GGG - chr7_2:82320761-82320780 Msa1082280:CDS 40.0%
! GTCAAGATGCATGCTTCTTT+TGG - chr7_2:82320815-82320834 Msa1082280:CDS 40.0%
TTGACTGCATACTAAGTGAG+TGG - chr7_2:82321121-82321140 Msa1082280:CDS 40.0%
TGACTGCATACTAAGTGAGT+GGG - chr7_2:82321122-82321141 Msa1082280:CDS 40.0%
GACATAGAGATTCCATCAGA+AGG - chr7_2:82322474-82322493 Msa1082280:intron 40.0%
GTTCTACCACCTTTACGTTT+GGG + chr7_2:82322519-82322538 None:intergenic 40.0%
AGTTCTACCACCTTTACGTT+TGG + chr7_2:82322520-82322539 None:intergenic 40.0%
! TTTTCTCGTTCTCTAGTGCA+GGG + chr7_2:82322623-82322642 None:intergenic 40.0%
! ATTTTCTCGTTCTCTAGTGC+AGG + chr7_2:82322624-82322643 None:intergenic 40.0%
TGCACTAGAGAACGAGAAAA+TGG - chr7_2:82322623-82322642 Msa1082280:intron 40.0%
ATGGTTATGGGCTCAGTAAA+TGG - chr7_2:82322642-82322661 Msa1082280:intron 40.0%
TGGTTATGGGCTCAGTAAAT+GGG - chr7_2:82322643-82322662 Msa1082280:intron 40.0%
CACGGTAATTGCAACCTATT+TGG + chr7_2:82322693-82322712 None:intergenic 40.0%
TTGCAATTACCGTGCATTGA+CGG - chr7_2:82322699-82322718 Msa1082280:intron 40.0%
AGTTGATTGTGACCGTATGT+TGG - chr7_2:82322743-82322762 Msa1082280:intron 40.0%
GTTGATTGTGACCGTATGTT+GGG - chr7_2:82322744-82322763 Msa1082280:intron 40.0%
! TATCATGGATACTTTGGAGG+TGG - chr7_2:82322818-82322837 Msa1082280:intron 40.0%
CACCAACACAAATGGAACAA+AGG - chr7_2:82322905-82322924 Msa1082280:CDS 40.0%
GACGAATCAATGTTCGAATG+AGG - chr7_2:82322950-82322969 Msa1082280:intron 40.0%
! TTCGGGTTTCGATGATAACT+TGG - chr7_2:82322998-82323017 Msa1082280:intron 40.0%
AGAAAGGTCAATCGTTGTTG+TGG - chr7_2:82323051-82323070 Msa1082280:intron 40.0%
GAAAGGTCAATCGTTGTTGT+GGG - chr7_2:82323052-82323071 Msa1082280:intron 40.0%
GGTTGTTGGATGATGATCAA+TGG - chr7_2:82323099-82323118 Msa1082280:CDS 40.0%
GGATGATGATCAATGGGAAA+AGG - chr7_2:82323106-82323125 Msa1082280:CDS 40.0%
TCCTCAGAAGCAAAATGCTT+TGG - chr7_2:82323154-82323173 Msa1082280:CDS 40.0%
!! ACCAAAGCATTTTGCTTCTG+AGG + chr7_2:82323158-82323177 None:intergenic 40.0%
! AGCTCCTTGTTGTGAGAAAG+TGG - chr7_2:82320494-82320513 Msa1082280:CDS 45.0%
! GCTCCTTGTTGTGAGAAAGT+GGG - chr7_2:82320495-82320514 Msa1082280:CDS 45.0%
TGGGTTTGAAGAAGGGAAGA+TGG - chr7_2:82320514-82320533 Msa1082280:CDS 45.0%
AGGTCATTGCCCAAAAATGC+AGG - chr7_2:82320597-82320616 Msa1082280:CDS 45.0%
! TGCATGCTTCTTTTGGCAAC+AGG - chr7_2:82320822-82320841 Msa1082280:CDS 45.0%
!! TCTTTTTCGTGACAGTGGCA+AGG + chr7_2:82322127-82322146 None:intergenic 45.0%
!! TGGCTTTTGGTAACTTCAGG+TGG - chr7_2:82322310-82322329 Msa1082280:intron 45.0%
! TGGCAAGTGACTTGCAATCA+AGG + chr7_2:82322337-82322356 None:intergenic 45.0%
TTGATTGCAAGTCACTTGCC+AGG - chr7_2:82322336-82322355 Msa1082280:intron 45.0%
ACTGGAACTCACACTTGAGT+AGG - chr7_2:82322385-82322404 Msa1082280:intron 45.0%
AGGAAAGTTTACAGCTTCCG+AGG - chr7_2:82322405-82322424 Msa1082280:intron 45.0%
GATACACCTCCCAAACGTAA+AGG - chr7_2:82322507-82322526 Msa1082280:intron 45.0%
AAGGTGGTAGAACTAGTCGA+TGG - chr7_2:82322526-82322545 Msa1082280:intron 45.0%
AGGTGGTAGAACTAGTCGAT+GGG - chr7_2:82322527-82322546 Msa1082280:intron 45.0%
TGCAGCAGGTTCACTTCTTT+GGG + chr7_2:82322580-82322599 None:intergenic 45.0%
TTGCAGCAGGTTCACTTCTT+TGG + chr7_2:82322581-82322600 None:intergenic 45.0%
! GGAAGTGTAACAATTGCAGC+AGG + chr7_2:82322594-82322613 None:intergenic 45.0%
TTTCTCGTTCTCTAGTGCAG+GGG + chr7_2:82322622-82322641 None:intergenic 45.0%
!! GTAAATGGGCCTTGTTCTAG+TGG - chr7_2:82322657-82322676 Msa1082280:intron 45.0%
CCATCTTCACCACTAGAACA+AGG + chr7_2:82322669-82322688 None:intergenic 45.0%
CCTTGTTCTAGTGGTGAAGA+TGG - chr7_2:82322666-82322685 Msa1082280:intron 45.0%
TCAGATCTGGTCCCAACATA+CGG + chr7_2:82322758-82322777 None:intergenic 45.0%
TATGTTGGGACCAGATCTGA+AGG - chr7_2:82322758-82322777 Msa1082280:intron 45.0%
AATGAAAGAGTGGGGGACAA+AGG - chr7_2:82322882-82322901 Msa1082280:CDS 45.0%
!! GACAAAGGCACCAACACAAA+TGG - chr7_2:82322897-82322916 Msa1082280:CDS 45.0%
GCCCTTTGTTCCATTTGTGT+TGG + chr7_2:82322910-82322929 None:intergenic 45.0%
!!! TATAAAATGAAATTTTTTAT+GGG - chr7_2:82321078-82321097 Msa1082280:CDS 5.0%
AGGCAAATGGGGAAGGTTCT+TGG - chr7_2:82320574-82320593 Msa1082280:CDS 50.0%
CAAATGGGGAAGGTTCTTGG+AGG - chr7_2:82320577-82320596 Msa1082280:CDS 50.0%
ATCTCGTTGTCTGTTCTGCC+TGG + chr7_2:82322357-82322376 None:intergenic 50.0%
ACACCTCCCAAACGTAAAGG+TGG - chr7_2:82322510-82322529 Msa1082280:intron 50.0%
CTACCACCTTTACGTTTGGG+AGG + chr7_2:82322516-82322535 None:intergenic 50.0%
GTGGTGAAGATGGCCCAAAT+AGG - chr7_2:82322676-82322695 Msa1082280:intron 50.0%
TCGTTCTCTAGTGCAGGGGT+GGG + chr7_2:82322618-82322637 None:intergenic 55.0%
GAAGGGAAGATGGACCGCAG+AGG - chr7_2:82320524-82320543 Msa1082280:CDS 60.0%
TTCTCTAGTGCAGGGGTGGG+TGG + chr7_2:82322615-82322634 None:intergenic 60.0%
CTCGTTCTCTAGTGCAGGGG+TGG + chr7_2:82322619-82322638 None:intergenic 60.0%
GGGAAGATGGACCGCAGAGG+AGG - chr7_2:82320527-82320546 Msa1082280:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 82320486 82323190 82320486 ID=Msa1082280;Name=Msa1082280
chr7_2 mRNA 82320486 82323190 82320486 ID=Msa1082280-mRNA-1;Parent=Msa1082280;Name=Msa1082280-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.33|1|1|1|3|0|374
chr7_2 exon 82323058 82323190 82323058 ID=Msa1082280-mRNA-1:exon:21320;Parent=Msa1082280-mRNA-1
chr7_2 exon 82322833 82322962 82322833 ID=Msa1082280-mRNA-1:exon:21319;Parent=Msa1082280-mRNA-1
chr7_2 exon 82320486 82321347 82320486 ID=Msa1082280-mRNA-1:exon:21318;Parent=Msa1082280-mRNA-1
chr7_2 CDS 82323058 82323190 82323058 ID=Msa1082280-mRNA-1:cds;Parent=Msa1082280-mRNA-1
chr7_2 CDS 82322833 82322962 82322833 ID=Msa1082280-mRNA-1:cds;Parent=Msa1082280-mRNA-1
chr7_2 CDS 82320486 82321347 82320486 ID=Msa1082280-mRNA-1:cds;Parent=Msa1082280-mRNA-1
Gene Sequence

>Msa1082280

ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGTTTGAAGAAGGGAAGATGGACCGCAGAGGAGGATGAAATTTTGACTCAATATGTTAAGGCAAATGGGGAAGGTTCTTGGAGGTCATTGCCCAAAAATGCAGGTTTGCTTAGATGTGGTAAAAGTTGTAGATTAAGATGGATTAACTATTTGAGAGCTGATCTCAAAAGGGGAAATATTTCTTCTGAAGAGGAAAGTATCATTGTCAAGATGCATGCTTCTTTTGGCAACAGGTGGTCCTTGATTGCAAGTCACTTGCCAGGCAGAACAGACAACGAGATTAAAAACTACTGGAACTCACACTTGAGTAGGAAAGTTTACAGCTTCCGAGGAACATCAACAAATTATAATAATTCAACAAATTCCAATAATATCAAAGACATAGAGATTCCATCAGAAGGAATCATAGTTGATACACCTCCCAAACGTAAAGGTGGTAGAACTAGTCGATGGGCCATGAAGAAGAACAAACGATATATATCCCAAAGAAGTGAACCTGCTGCAATTGTTACACTTCCACCCACCCCTGCACTAGAGAACGAGAAAATGGTTATGGGCTCAGTAAATGGGCCTTGTTCTAGTGGTGAAGATGGCCCAAATAGGTTGCAATTACCGTGCATTGACGGTGAAAATAATAGTAGTATTGAAGTTGATTGTGACCGTATGTTGGGACCAGATCTGAAGGTCATTAATGATGGTGAGTTGTTAGATTTTAATGATATTATCATGGATACTTTGGAGGTGGAAGAAGAAAAAGAAAGTAATGATGAAAATGTGGTTGTGATTAATGAAAGAGTGGGGGACAAAGGCACCAACACAAATGGAACAAAGGGCATAGAGAGAAATAACAATGTGACGAATCAATGTTCGAATGAGGAGTTCAATTCTTCAACTTCAAAGACTTCGGGTTTCGATGATAACTTGGATTGGGAGAGTGTTATGCCATTGTTGAATCAGAAAGGTCAATCGTTGTTGTGGGAGCAAGATGAAAACATGCTAACTTGGTTGTTGGATGATGATCAATGGGAAAAGGATTTTCAGAGATTTCGAGATATTGATCCTCAGAAGCAAAATGCTTTGGTTTCTTGGTTTTAA
Protein sequence

>Msa1082280

MGRAPCCEKVGLKKGRWTAEEDEILTQYVKANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISSEEESIIVKMHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSFRGTSTNYNNSTNSNNIKDIEIPSEGIIVDTPPKRKGGRTSRWAMKKNKRYISQRSEPAAIVTLPPTPALENEKMVMGSVNGPCSSGEDGPNRLQLPCIDGENNSSIEVDCDRMLGPDLKVINDGELLDFNDIIMDTLEVEEEKESNDENVVVINERVGDKGTNTNGTKGIERNNNVTNQCSNEEFNSSTSKTSGFDDNLDWESVMPLLNQKGQSLLWEQDENMLTWLLDDDQWEKDFQRFRDIDPQKQNALVSWF*