AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041100 MtrunA17_Chr7g0269831 86.400 375 25 6 1 369 1 355 0.0 607
Msa1041100 MtrunA17_Chr1g0194951 46.819 393 161 9 1 369 1 369 7.12e-101 303
Msa1041100 MtrunA17_Chr4g0068061 64.417 163 54 2 1 163 1 159 5.59e-71 225
Msa1041100 MtrunA17_Chr7g0275911 71.552 116 33 0 1 116 1 116 8.11e-61 196
Msa1041100 MtrunA17_Chr8g0346561 71.552 116 33 0 1 116 1 116 9.54e-60 195
Msa1041100 MtrunA17_Chr4g0070641 63.433 134 49 0 1 134 1 134 6.60e-59 188
Msa1041100 MtrunA17_Chr1g0167661 64.394 132 47 0 1 132 1 132 9.82e-59 191
Msa1041100 MtrunA17_Chr4g0070611 63.433 134 49 0 1 134 1 134 2.38e-58 191
Msa1041100 MtrunA17_Chr1g0167691 69.828 116 35 0 1 116 1 116 3.42e-57 187
Msa1041100 MtrunA17_Chr3g0131121 69.492 118 36 0 1 118 1 118 3.96e-57 188
Msa1041100 MtrunA17_Chr4g0037141 69.828 116 35 0 1 116 1 116 7.14e-57 187
Msa1041100 MtrunA17_Chr1g0203411 67.241 116 38 0 1 116 1 116 1.67e-56 186
Msa1041100 MtrunA17_Chr1g0187761 68.966 116 36 0 1 116 1 116 1.99e-56 185
Msa1041100 MtrunA17_Chr3g0121241 68.750 112 35 0 5 116 35 146 2.89e-55 183
Msa1041100 MtrunA17_Chr8g0385321 62.879 132 49 0 1 132 1 132 6.11e-55 183
Msa1041100 MtrunA17_Chr4g0039971 67.241 116 38 0 1 116 2 117 9.29e-55 183
Msa1041100 MtrunA17_Chr3g0110351 67.241 116 38 0 1 116 1 116 2.55e-54 181
Msa1041100 MtrunA17_Chr7g0217741 67.241 116 38 0 1 116 1 116 5.14e-54 180
Msa1041100 MtrunA17_Chr5g0434571 67.241 116 38 0 1 116 37 152 7.39e-54 181
Msa1041100 MtrunA17_Chr7g0261281 64.655 116 41 0 1 116 1 116 1.28e-53 178
Msa1041100 MtrunA17_Chr3g0115821 64.655 116 41 0 1 116 1 116 1.71e-53 180
Msa1041100 MtrunA17_Chr4g0042671 67.241 116 38 0 1 116 1 116 1.91e-53 181
Msa1041100 MtrunA17_Chr7g0274581 62.931 116 43 0 1 116 1 116 2.16e-53 175
Msa1041100 MtrunA17_Chr6g0453471 65.517 116 40 0 1 116 1 116 7.04e-53 179
Msa1041100 MtrunA17_Chr8g0349261 66.949 118 37 2 1 116 1 118 7.72e-53 177
Msa1041100 MtrunA17_Chr2g0281071 65.812 117 39 1 1 116 1 117 3.12e-52 177
Msa1041100 MtrunA17_Chr2g0323411 64.655 116 41 0 1 116 1 116 3.22e-52 176
Msa1041100 MtrunA17_Chr2g0294811 81.522 92 17 0 1 92 1 92 3.56e-52 169
Msa1041100 MtrunA17_Chr4g0060721 63.793 116 42 0 1 116 2 117 1.42e-51 174
Msa1041100 MtrunA17_Chr4g0048511 65.812 117 39 1 1 116 1 117 1.97e-51 175
Msa1041100 MtrunA17_Chr7g0228891 58.779 131 54 0 1 131 1 131 5.85e-51 171
Msa1041100 MtrunA17_Chr4g0057031 62.931 116 43 0 1 116 1 116 1.61e-50 170
Msa1041100 MtrunA17_Chr7g0254411 59.016 122 50 0 1 122 1 122 4.28e-50 171
Msa1041100 MtrunA17_Chr5g0435101 59.829 117 47 0 3 119 2 118 1.02e-49 166
Msa1041100 MtrunA17_Chr3g0092401 55.556 135 59 1 1 135 2 135 1.13e-49 169
Msa1041100 MtrunA17_Chr5g0410961 61.207 116 45 0 1 116 1 116 1.19e-49 170
Msa1041100 MtrunA17_Chr3g0103281 62.931 116 43 0 1 116 1 116 1.97e-49 169
Msa1041100 MtrunA17_Chr5g0395281 60.345 116 46 0 1 116 1 116 3.94e-48 165
Msa1041100 MtrunA17_Chr2g0330041 52.899 138 65 0 1 138 1 138 4.23e-48 167
Msa1041100 MtrunA17_Chr1g0193371 50.955 157 77 0 1 157 1 157 8.58e-48 166
Msa1041100 MtrunA17_Chr8g0342541 52.817 142 58 1 1 133 1 142 1.14e-47 165
Msa1041100 MtrunA17_Chr1g0193801 63.793 116 42 0 1 116 1 116 3.00e-47 165
Msa1041100 MtrunA17_Chr7g0217221 58.621 116 48 0 1 116 1 116 3.58e-47 161
Msa1041100 MtrunA17_Chr4g0022931 52.349 149 67 2 1 145 1 149 4.09e-47 161
Msa1041100 MtrunA17_Chr7g0270891 62.931 116 43 0 1 116 1 116 8.65e-47 163
Msa1041100 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 9.51e-47 162
Msa1041100 MtrunA17_Chr4g0022891 62.500 112 42 0 1 112 1 112 1.40e-46 159
Msa1041100 MtrunA17_Chr8g0342521 60.169 118 47 0 1 118 1 118 1.82e-46 162
Msa1041100 MtrunA17_Chr4g0058631 53.147 143 67 0 1 143 1 143 4.69e-46 161
Msa1041100 MtrunA17_Chr4g0044421 50.676 148 71 2 3 149 2 148 1.81e-45 154
Msa1041100 MtrunA17_Chr1g0151941 55.462 119 52 1 1 118 1 119 2.00e-45 156
Msa1041100 MtrunA17_Chr2g0323351 59.483 116 47 0 1 116 1 116 2.36e-45 156
Msa1041100 MtrunA17_Chr6g0453211 58.559 111 46 0 1 111 1 111 3.45e-45 157
Msa1041100 MtrunA17_Chr8g0387421 56.897 116 50 0 1 116 1 116 3.86e-45 157
Msa1041100 MtrunA17_Chr4g0022901 58.974 117 47 1 1 116 1 117 6.64e-45 155
Msa1041100 MtrunA17_Chr5g0397231 60.000 110 44 0 1 110 1 110 8.20e-45 157
Msa1041100 MtrunA17_Chr5g0400821 58.120 117 48 1 1 116 1 117 9.77e-45 156
Msa1041100 MtrunA17_Chr3g0117091 61.207 116 45 0 1 116 1 116 1.01e-44 157
Msa1041100 MtrunA17_Chr4g0022881 52.448 143 66 1 1 143 1 141 1.11e-44 154
Msa1041100 MtrunA17_Chr2g0309911 58.475 118 48 1 1 118 1 117 1.40e-44 155
Msa1041100 MtrunA17_Chr4g0022911 56.410 117 50 1 1 116 1 117 1.55e-44 155
Msa1041100 MtrunA17_Chr7g0271241 65.138 109 38 0 1 109 1 109 1.60e-44 157
Msa1041100 MtrunA17_Chr1g0152011 58.120 117 48 1 1 116 1 117 1.67e-44 156
Msa1041100 MtrunA17_Chr8g0342481 52.206 136 63 2 1 135 1 135 2.00e-44 157
Msa1041100 MtrunA17_Chr4g0028311 55.372 121 53 1 1 120 1 121 3.57e-44 155
Msa1041100 MtrunA17_Chr1g0211161 60.526 114 45 0 3 116 4 117 5.21e-44 152
Msa1041100 MtrunA17_Chr2g0327351 60.360 111 43 1 1 110 1 111 5.26e-44 154
Msa1041100 MtrunA17_Chr7g0264641 55.833 120 52 1 1 119 1 120 5.88e-44 153
Msa1041100 MtrunA17_Chr6g0452271 56.034 116 51 0 1 116 1 116 1.29e-43 154
Msa1041100 MtrunA17_Chr3g0135311 55.085 118 52 1 1 117 1 118 2.03e-43 154
Msa1041100 MtrunA17_Chr4g0055981 60.185 108 43 0 9 116 52 159 6.66e-43 149
Msa1041100 MtrunA17_Chr8g0343831 62.136 103 39 0 14 116 10 112 9.25e-43 149
Msa1041100 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 1.05e-42 152
Msa1041100 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 1.11e-42 150
Msa1041100 MtrunA17_Chr7g0228231 60.952 105 41 0 12 116 14 118 2.16e-42 147
Msa1041100 MtrunA17_Chr1g0186061 64.078 103 37 0 13 115 21 123 2.74e-42 148
Msa1041100 MtrunA17_Chr6g0450101 55.932 118 50 1 1 116 1 118 5.65e-42 145
Msa1041100 MtrunA17_Chr8g0354661 61.321 106 41 0 10 115 35 140 7.80e-42 153
Msa1041100 MtrunA17_Chr1g0168661 63.462 104 38 0 13 116 22 125 8.89e-42 147
Msa1041100 MtrunA17_Chr6g0487491 47.586 145 56 3 1 125 1 145 1.20e-41 146
Msa1041100 MtrunA17_Chr2g0328771 56.637 113 49 0 12 124 20 132 2.74e-41 147
Msa1041100 MtrunA17_Chr3g0088461 60.185 108 43 0 9 116 19 126 6.30e-41 147
Msa1041100 MtrunA17_Chr1g0194291 55.357 112 50 0 9 120 18 129 1.64e-40 144
Msa1041100 MtrunA17_Chr4g0032401 60.000 105 42 0 12 116 17 121 8.88e-40 144
Msa1041100 MtrunA17_Chr1g0209661 56.190 105 46 0 12 116 27 131 1.30e-39 142
Msa1041100 MtrunA17_Chr7g0240821 49.254 134 66 1 17 148 6 139 2.20e-39 139
Msa1041100 MtrunA17_Chr3g0099131 61.538 104 40 0 12 115 41 144 2.39e-39 146
Msa1041100 MtrunA17_Chr3g0080861 57.009 107 46 0 10 116 35 141 2.64e-39 146
Msa1041100 MtrunA17_Chr1g0203441 56.410 117 50 1 1 116 1 117 9.67e-39 139
Msa1041100 MtrunA17_Chr2g0322521 59.813 107 43 0 9 115 26 132 8.33e-38 140
Msa1041100 MtrunA17_Chr5g0417821 57.944 107 45 0 10 116 5 111 1.21e-37 137
Msa1041100 MtrunA17_Chr1g0194301 43.421 152 76 2 12 153 33 184 4.38e-37 135
Msa1041100 MtrunA17_Chr7g0220341 54.955 111 48 1 10 118 23 133 5.23e-37 135
Msa1041100 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 7.35e-37 128
Msa1041100 MtrunA17_Chr6g0470971 55.357 112 50 0 4 115 6 117 9.05e-37 134
Msa1041100 MtrunA17_Chr1g0154031 57.692 104 44 0 12 115 76 179 1.28e-36 137
Msa1041100 MtrunA17_Chr5g0434911 50.893 112 55 0 7 118 16 127 5.44e-36 132
Msa1041100 MtrunA17_Chr1g0180391 59.048 105 43 0 12 116 19 123 6.51e-36 130
Msa1041100 MtrunA17_Chr5g0434931 50.926 108 53 0 11 118 34 141 1.20e-35 131
Msa1041100 MtrunA17_Chr1g0192411 58.000 100 42 0 10 109 10 109 1.31e-35 134
Msa1041100 MtrunA17_Chr5g0434831 42.771 166 91 2 11 176 6 167 1.46e-35 128
Msa1041100 MtrunA17_Chr7g0228991 51.852 108 52 0 11 118 28 135 1.11e-34 129
Msa1041100 MtrunA17_Chr4g0068921 56.311 103 45 0 12 114 24 126 2.82e-34 125
Msa1041100 MtrunA17_Chr2g0293911 53.211 109 51 0 8 116 20 128 8.29e-34 127
Msa1041100 MtrunA17_Chr8g0360111 52.427 103 49 0 11 113 24 126 8.67e-34 125
Msa1041100 MtrunA17_Chr5g0434841 43.333 150 83 1 11 160 19 166 2.69e-33 126
Msa1041100 MtrunA17_Chr5g0440781 53.535 99 45 1 13 110 13 111 9.50e-33 121
Msa1041100 MtrunA17_Chr8g0342531 39.241 158 87 2 1 149 1 158 1.33e-32 120
Msa1041100 MtrunA17_Chr5g0440761 53.535 99 45 1 13 110 13 111 3.41e-32 122
Msa1041100 MtrunA17_Chr5g0441141 53.535 99 45 1 13 110 13 111 4.79e-32 121
Msa1041100 MtrunA17_Chr2g0327821 50.476 105 52 0 12 116 6 110 1.43e-31 119
Msa1041100 MtrunA17_Chr7g0247131 64.474 76 27 0 44 119 10 85 1.83e-31 120
Msa1041100 MtrunA17_Chr4g0030881 50.000 110 48 1 13 115 8 117 2.04e-31 119
Msa1041100 MtrunA17_Chr8g0342511 56.322 87 38 0 1 87 1 87 1.76e-30 112
Msa1041100 MtrunA17_Chr2g0323321 57.609 92 38 1 1 92 1 91 2.67e-30 112
Msa1041100 MtrunA17_Chr3g0099141 57.471 87 37 0 8 94 36 122 1.21e-29 111
Msa1041100 MtrunA17_Chr5g0441131 50.980 102 49 1 10 110 7 108 1.68e-29 112
Msa1041100 MtrunA17_Chr8g0334881 50.000 104 51 1 12 114 10 113 4.17e-29 114
Msa1041100 MtrunA17_Chr4g0013361 48.148 108 55 1 8 114 6 113 5.53e-29 114
Msa1041100 MtrunA17_Chr8g0342461 54.444 90 40 1 1 89 1 90 1.35e-28 108
Msa1041100 MtrunA17_Chr8g0342471 54.444 90 40 1 1 89 1 90 2.14e-28 108
Msa1041100 MtrunA17_Chr5g0395221 53.409 88 41 0 1 88 1 88 8.96e-28 104
Msa1041100 MtrunA17_Chr4g0053431 52.294 109 51 1 14 122 5 112 2.01e-27 109
Msa1041100 MtrunA17_Chr3g0133601 50.485 103 50 1 14 116 37 138 1.03e-25 103
Msa1041100 MtrunA17_Chr3g0117511 37.952 166 98 4 8 170 177 340 3.44e-25 105
Msa1041100 MtrunA17_Chr4g0008551 51.456 103 47 2 14 115 38 138 3.18e-24 102
Msa1041100 MtrunA17_Chr5g0429661 48.333 120 58 3 12 130 120 236 3.57e-24 102
Msa1041100 MtrunA17_Chr5g0401731 47.170 106 55 1 14 119 15 119 4.77e-24 101
Msa1041100 MtrunA17_Chr6g0454921 36.747 166 91 4 14 166 15 179 4.84e-24 98.6
Msa1041100 MtrunA17_Chr5g0425591 50.588 85 41 1 10 93 7 91 2.76e-23 92.8
Msa1041100 MtrunA17_Chr4g0058991 43.333 120 64 3 8 126 203 319 2.84e-23 100
Msa1041100 MtrunA17_Chr7g0229101 59.420 69 28 0 44 112 4 72 8.44e-23 95.1
Msa1041100 MtrunA17_Chr5g0437321 49.495 99 49 1 14 112 19 116 9.12e-23 96.7
Msa1041100 MtrunA17_Chr7g0229131 52.055 73 35 0 44 116 4 76 9.01e-22 91.3
Msa1041100 MtrunA17_Chr6g0480581 42.574 101 57 1 14 114 4 103 1.40e-21 92.4
Msa1041100 MtrunA17_Chr5g0434901 55.385 65 29 0 48 112 9 73 7.34e-21 87.0
Msa1041100 MtrunA17_Chr7g0238631 32.444 225 120 6 12 216 111 323 1.47e-20 93.2
Msa1041100 MtrunA17_Chr7g0238631 38.000 100 60 2 14 112 61 159 3.83e-11 64.3
Msa1041100 MtrunA17_Chr6g0453751 47.826 92 39 2 11 93 19 110 2.11e-20 86.3
Msa1041100 MtrunA17_Chr3g0139671 36.154 130 80 2 12 139 83 211 2.22e-20 93.2
Msa1041100 MtrunA17_Chr1g0157731 34.091 132 84 2 12 141 89 219 2.92e-20 92.8
Msa1041100 MtrunA17_Chr3g0093811 48.810 84 40 1 36 116 3 86 5.14e-20 88.6
Msa1041100 MtrunA17_Chr6g0460661 38.542 96 58 1 14 109 16 110 1.97e-19 84.3
Msa1041100 MtrunA17_Chr7g0247141 70.833 48 13 1 1 47 1 48 3.11e-18 78.2
Msa1041100 MtrunA17_Chr4g0042501 40.351 114 62 3 14 126 105 213 3.51e-18 85.5
Msa1041100 MtrunA17_Chr7g0228531 41.509 106 60 2 10 115 216 319 5.80e-18 84.7
Msa1041100 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 8.78e-18 84.7
Msa1041100 MtrunA17_Chr7g0238651 39.175 97 57 1 14 108 7 103 1.03e-17 83.6
Msa1041100 MtrunA17_Chr3g0125801 44.660 103 54 2 14 115 16 116 1.58e-17 82.0
Msa1041100 MtrunA17_Chr5g0417621 40.385 104 59 2 14 116 134 235 2.02e-17 83.2
Msa1041100 MtrunA17_Chr7g0228481 41.584 101 57 2 10 110 216 314 1.92e-16 80.5
Msa1041100 MtrunA17_Chr7g0228401 45.349 86 46 1 25 110 290 374 2.28e-16 80.5
Msa1041100 MtrunA17_Chr7g0233061 38.835 103 48 3 14 110 180 273 2.58e-16 79.3
Msa1041100 MtrunA17_Chr6g0460671 39.216 102 61 1 14 115 99 199 4.06e-16 78.6
Msa1041100 MtrunA17_Chr1g0193901 50.000 84 40 2 12 93 11 94 4.22e-16 73.6
Msa1041100 MtrunA17_Chr1g0193891 50.000 84 40 2 12 93 11 94 4.22e-16 73.6
Msa1041100 MtrunA17_Chr1g0193871 50.000 84 40 2 12 93 11 94 4.22e-16 73.6
Msa1041100 MtrunA17_Chr1g0193881 50.000 84 40 2 12 93 11 94 4.22e-16 73.6
Msa1041100 MtrunA17_Chr7g0254261 36.364 132 76 3 9 136 80 207 1.08e-15 77.4
Msa1041100 MtrunA17_Chr1g0177901 43.678 87 48 1 24 110 4 89 2.17e-15 74.3
Msa1041100 MtrunA17_Chr5g0416341 37.234 94 58 1 17 110 29 121 8.88e-14 72.4
Msa1041100 MtrunA17_Chr5g0434871 55.556 45 20 0 74 118 2 46 6.77e-13 63.5
Msa1041100 MtrunA17_Chr8g0362231 34.043 94 61 1 17 110 25 117 8.21e-13 69.3
Msa1041100 MtrunA17_Chr2g0294821 87.097 31 4 0 89 119 5 35 3.78e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041100 AT5G49330.1 64.130 184 56 2 1 174 1 184 7.22e-76 238
Msa1041100 AT2G47460.1 41.058 397 178 17 1 369 1 369 9.06e-74 234
Msa1041100 AT3G62610.1 40.299 402 146 16 1 369 1 341 4.47e-68 218
Msa1041100 AT4G38620.1 65.649 131 45 0 1 131 1 131 3.48e-58 191
Msa1041100 AT4G09460.1 60.284 141 56 0 1 141 1 141 3.86e-58 189
Msa1041100 AT1G35515.1 71.552 116 33 0 1 116 1 116 5.58e-58 187
Msa1041100 AT2G16720.1 62.687 134 50 0 1 134 1 134 9.40e-58 189
Msa1041100 AT3G61250.1 52.903 155 68 1 1 155 1 150 1.10e-56 187
Msa1041100 AT1G22640.1 62.791 129 47 1 1 129 1 128 4.32e-56 184
Msa1041100 AT2G31180.1 57.823 147 58 2 1 143 1 147 1.80e-55 182
Msa1041100 AT4G34990.1 68.966 116 36 0 1 116 1 116 4.67e-55 182
Msa1041100 AT3G23250.1 54.730 148 66 1 1 147 1 148 1.31e-54 181
Msa1041100 AT5G15310.4 56.835 139 60 0 1 139 1 139 2.69e-54 179
Msa1041100 AT3G02940.2 64.655 116 41 0 1 116 1 116 4.28e-54 181
Msa1041100 AT5G15310.1 65.517 116 40 0 1 116 1 116 7.16e-54 181
Msa1041100 AT3G02940.1 64.655 116 41 0 1 116 1 116 8.91e-54 180
Msa1041100 AT3G02940.3 64.655 116 41 0 1 116 1 116 8.91e-54 180
Msa1041100 AT3G13540.1 67.257 113 37 0 4 116 15 127 9.98e-54 178
Msa1041100 AT5G15310.2 65.517 116 40 0 1 116 1 116 1.09e-53 180
Msa1041100 AT4G28110.1 63.793 116 42 0 1 116 1 116 1.13e-53 179
Msa1041100 AT4G21440.1 64.655 116 41 0 1 116 1 116 2.05e-53 180
Msa1041100 AT3G01140.2 65.517 116 40 0 1 116 1 116 2.16e-53 180
Msa1041100 AT1G06180.1 64.957 117 41 0 1 117 1 117 2.45e-53 177
Msa1041100 AT5G16600.1 67.241 116 38 0 1 116 1 116 4.84e-53 179
Msa1041100 AT1G66230.1 65.517 116 40 0 1 116 1 116 4.94e-53 177
Msa1041100 AT1G16490.1 64.957 117 41 0 2 118 4 120 1.30e-52 176
Msa1041100 AT5G16770.4 64.655 116 41 0 1 116 1 116 1.58e-52 177
Msa1041100 AT5G16770.3 64.655 116 41 0 1 116 1 116 1.58e-52 177
Msa1041100 AT5G16770.1 64.655 116 41 0 1 116 1 116 2.49e-52 177
Msa1041100 AT5G16770.2 64.655 116 41 0 1 116 1 116 2.49e-52 177
Msa1041100 AT4G05100.1 64.957 117 40 1 1 116 1 117 1.01e-51 175
Msa1041100 AT1G79180.1 61.475 122 47 0 2 123 4 125 1.57e-51 174
Msa1041100 AT5G07690.1 65.789 114 39 0 1 114 1 114 5.12e-51 174
Msa1041100 AT1G34670.1 63.793 116 42 0 1 116 1 116 6.21e-51 174
Msa1041100 AT4G17785.1 65.812 117 39 1 1 116 1 117 6.44e-51 174
Msa1041100 AT4G17785.2 65.812 117 39 1 1 116 1 117 7.03e-51 174
Msa1041100 AT4G22680.1 62.931 116 43 0 1 116 1 116 1.08e-50 171
Msa1041100 AT5G61420.2 63.793 116 42 0 1 116 1 116 1.26e-50 173
Msa1041100 AT3G01140.1 64.602 113 40 0 4 116 47 159 2.42e-50 173
Msa1041100 AT1G74650.1 60.000 120 48 0 1 120 1 120 2.72e-50 171
Msa1041100 AT1G08810.1 61.207 116 45 0 1 116 1 116 3.09e-50 170
Msa1041100 AT5G65230.1 62.931 116 43 0 1 116 1 116 3.19e-50 171
Msa1041100 AT4G12350.1 62.931 116 43 0 1 116 1 116 1.72e-49 168
Msa1041100 AT5G62470.2 62.069 116 44 0 1 116 1 116 2.82e-49 169
Msa1041100 AT5G56110.1 63.793 116 42 0 1 116 1 116 6.82e-49 167
Msa1041100 AT3G47600.1 60.345 116 46 0 1 116 1 116 7.43e-49 168
Msa1041100 AT5G26660.1 64.655 116 41 0 1 116 1 116 1.81e-48 167
Msa1041100 AT5G10280.1 62.069 116 44 0 1 116 1 116 2.13e-48 167
Msa1041100 AT1G56160.1 61.739 115 44 0 2 116 4 118 2.43e-48 166
Msa1041100 AT5G07700.1 61.207 116 45 0 1 116 1 116 3.36e-48 166
Msa1041100 AT5G07700.2 61.207 116 45 0 1 116 1 116 3.36e-48 166
Msa1041100 AT4G01680.3 58.955 134 53 2 1 133 1 133 5.71e-48 163
Msa1041100 AT5G14340.1 62.069 116 44 0 1 116 13 128 6.45e-48 164
Msa1041100 AT5G62470.1 62.069 116 43 1 1 116 1 115 6.82e-48 166
Msa1041100 AT3G28910.1 61.207 116 45 0 1 116 1 116 7.09e-48 165
Msa1041100 AT1G09540.1 60.448 134 51 2 1 133 1 133 1.56e-47 165
Msa1041100 AT3G13890.2 58.475 118 49 0 1 118 1 118 2.20e-47 165
Msa1041100 AT5G60890.1 60.345 116 46 0 1 116 1 116 2.24e-47 163
Msa1041100 AT3G12820.1 61.404 114 44 0 3 116 5 118 3.34e-47 160
Msa1041100 AT4G01680.1 63.793 116 42 0 1 116 1 116 3.79e-47 163
Msa1041100 AT1G57560.2 63.793 116 42 0 1 116 1 116 8.34e-47 160
Msa1041100 AT1G57560.1 63.793 116 42 0 1 116 1 116 9.72e-47 162
Msa1041100 AT4G37780.1 55.645 124 54 1 1 123 1 124 1.96e-46 160
Msa1041100 AT1G18570.1 60.684 117 45 1 1 116 1 117 2.29e-46 162
Msa1041100 AT5G54230.1 61.207 116 45 0 1 116 1 116 3.52e-46 160
Msa1041100 AT1G74080.1 61.404 114 44 0 1 114 1 114 8.17e-46 160
Msa1041100 AT5G62320.1 49.342 152 70 1 2 146 3 154 9.21e-46 157
Msa1041100 AT1G63910.1 58.621 116 48 0 1 116 1 116 1.08e-45 160
Msa1041100 AT1G79180.2 49.032 155 46 1 2 123 4 158 3.62e-45 158
Msa1041100 AT3G12720.1 59.292 113 46 0 6 118 16 128 1.47e-44 156
Msa1041100 AT3G13890.1 54.331 127 49 1 1 118 1 127 2.71e-44 157
Msa1041100 AT5G14750.1 61.538 104 40 0 13 116 17 120 3.34e-44 152
Msa1041100 AT5G23000.1 58.120 117 48 1 1 116 1 117 4.14e-44 155
Msa1041100 AT3G49690.1 57.265 117 49 1 1 116 1 117 8.39e-44 154
Msa1041100 AT4G01680.2 57.812 128 42 1 1 116 1 128 8.86e-44 155
Msa1041100 AT2G36890.1 55.462 119 52 1 1 118 1 119 2.16e-43 152
Msa1041100 AT2G36890.2 55.462 119 52 1 1 118 42 160 2.62e-43 153
Msa1041100 AT5G57620.1 57.265 117 49 1 1 116 1 117 4.50e-43 152
Msa1041100 AT5G65790.1 56.410 117 50 1 1 116 1 117 4.99e-43 154
Msa1041100 AT4G13480.1 61.017 118 43 1 13 130 7 121 5.29e-43 150
Msa1041100 AT2G32460.1 61.111 108 42 0 8 115 14 121 1.65e-42 155
Msa1041100 AT2G32460.2 61.905 105 40 0 11 115 5 109 1.87e-42 154
Msa1041100 AT5G40330.1 58.654 104 43 0 13 116 13 116 2.11e-42 147
Msa1041100 AT5G35550.1 62.857 105 39 0 12 116 14 118 2.44e-42 149
Msa1041100 AT5G12870.1 61.905 105 40 0 12 116 18 122 2.84e-42 149
Msa1041100 AT3G24310.1 62.963 108 40 0 11 118 17 124 3.19e-42 149
Msa1041100 AT3G28470.1 58.182 110 46 0 1 110 1 110 6.47e-42 149
Msa1041100 AT3G08500.1 61.111 108 42 0 9 116 27 134 8.28e-42 149
Msa1041100 AT5G55020.1 61.905 105 40 0 10 114 24 128 2.31e-41 152
Msa1041100 AT3G27810.1 60.000 105 42 0 12 116 20 124 3.31e-41 144
Msa1041100 AT5G40350.1 57.522 113 48 0 12 124 17 129 3.46e-41 144
Msa1041100 AT3G01530.1 59.048 105 43 0 12 116 25 129 1.09e-40 142
Msa1041100 AT1G74430.1 56.897 116 50 0 1 116 1 116 1.28e-40 144
Msa1041100 AT5G06100.1 59.048 105 43 0 11 115 31 135 3.15e-40 148
Msa1041100 AT3G27920.1 48.485 132 68 0 13 144 15 146 3.73e-40 142
Msa1041100 AT5G52600.1 57.143 112 48 0 9 120 9 120 3.99e-40 141
Msa1041100 AT3G11440.2 61.538 104 40 0 12 115 41 144 4.60e-40 147
Msa1041100 AT3G30210.1 59.615 104 42 0 11 114 26 129 1.00e-39 142
Msa1041100 AT5G06100.5 59.048 105 43 0 11 115 31 135 1.13e-39 147
Msa1041100 AT5G06100.2 59.048 105 43 0 11 115 31 135 1.13e-39 147
Msa1041100 AT5G06100.3 59.048 105 43 0 11 115 31 135 1.13e-39 147
Msa1041100 AT5G06100.4 59.048 105 43 0 11 115 31 135 1.13e-39 147
Msa1041100 AT3G11440.3 61.538 104 40 0 12 115 41 144 1.94e-39 147
Msa1041100 AT3G11440.4 61.538 104 40 0 12 115 41 144 1.94e-39 147
Msa1041100 AT3G11440.1 61.538 104 40 0 12 115 41 144 1.94e-39 147
Msa1041100 AT1G66370.1 53.913 115 49 1 1 115 1 111 2.16e-38 138
Msa1041100 AT1G48000.1 56.075 107 47 0 10 116 30 136 2.19e-38 138
Msa1041100 AT1G25340.1 50.820 122 57 1 13 134 19 137 3.92e-38 138
Msa1041100 AT1G68320.1 55.238 105 47 0 12 116 19 123 4.45e-38 138
Msa1041100 AT4G26930.1 46.809 141 69 1 10 144 17 157 4.93e-38 140
Msa1041100 AT1G18710.1 52.586 116 55 0 1 116 1 116 6.31e-38 137
Msa1041100 AT2G47190.1 50.806 124 60 1 8 131 16 138 1.06e-37 137
Msa1041100 AT1G66380.1 59.048 105 43 0 11 115 7 111 6.74e-37 130
Msa1041100 AT4G25560.1 60.194 103 41 0 13 115 11 113 1.19e-36 134
Msa1041100 AT1G56650.1 58.095 105 44 0 11 115 7 111 3.97e-36 132
Msa1041100 AT3G06490.1 57.798 109 46 0 8 116 15 123 1.07e-35 133
Msa1041100 AT2G26960.1 52.830 106 50 0 9 114 17 122 8.24e-35 132
Msa1041100 AT1G66390.1 57.143 105 45 0 11 115 7 111 1.10e-34 128
Msa1041100 AT5G52260.1 57.282 103 44 0 13 115 13 115 2.31e-34 128
Msa1041100 AT3G48920.1 53.846 104 48 0 13 116 19 122 4.26e-34 127
Msa1041100 AT1G25340.2 48.361 122 55 2 13 134 19 132 6.30e-34 127
Msa1041100 AT1G25340.3 48.361 122 55 2 13 134 19 132 9.77e-34 127
Msa1041100 AT5G59780.3 52.381 105 50 0 12 116 8 112 1.15e-33 125
Msa1041100 AT3G46130.1 52.830 106 50 0 11 116 8 113 1.28e-33 125
Msa1041100 AT3G53200.1 49.624 133 57 2 12 134 9 141 2.52e-33 124
Msa1041100 AT5G49620.1 52.212 113 54 0 8 120 22 134 5.95e-33 125
Msa1041100 AT5G26660.2 72.222 72 20 0 45 116 14 85 9.64e-31 119
Msa1041100 AT5G14750.3 62.338 77 26 1 40 116 13 86 5.44e-30 113
Msa1041100 AT3G60460.1 48.624 109 55 1 7 114 6 114 1.36e-29 116
Msa1041100 AT5G49620.2 46.457 127 54 1 8 120 22 148 2.70e-29 115
Msa1041100 AT5G35550.2 69.444 72 22 0 45 116 50 121 8.13e-29 113
Msa1041100 AT3G12820.2 65.714 70 24 0 47 116 1 70 8.96e-29 110
Msa1041100 AT3G27810.2 63.889 72 26 0 45 116 4 75 1.59e-28 109
Msa1041100 AT5G40350.2 58.537 82 34 0 43 124 3 84 2.60e-28 108
Msa1041100 AT2G26950.1 46.226 106 57 0 9 114 13 118 4.74e-28 113
Msa1041100 AT3G47600.2 62.500 72 27 0 45 116 39 110 6.03e-26 106
Msa1041100 AT5G59780.2 61.111 72 28 0 45 116 20 91 7.00e-26 103
Msa1041100 AT3G46130.3 60.274 73 29 0 44 116 9 81 7.17e-26 104
Msa1041100 AT3G53200.2 66.197 71 24 0 45 115 9 79 8.68e-26 103
Msa1041100 AT3G46130.4 61.111 72 28 0 45 116 20 91 1.74e-25 103
Msa1041100 AT2G39880.1 52.830 106 41 2 14 115 50 150 1.97e-24 103
Msa1041100 AT4G18770.1 43.802 121 62 3 8 126 211 327 2.16e-24 103
Msa1041100 AT3G09230.1 47.273 110 49 2 14 119 55 159 3.98e-24 102
Msa1041100 AT3G27785.1 45.217 115 57 3 8 120 183 293 9.93e-24 102
Msa1041100 AT3G55730.1 51.961 102 48 1 14 115 56 156 1.07e-23 101
Msa1041100 AT1G66380.3 61.111 72 28 0 44 115 7 78 2.01e-23 94.0
Msa1041100 AT5G40360.1 43.119 109 60 2 12 120 156 262 3.30e-23 99.8
Msa1041100 AT4G37260.1 46.018 113 59 2 14 126 13 123 4.97e-23 98.6
Msa1041100 AT1G22640.3 59.722 72 28 1 58 129 1 71 7.51e-23 95.1
Msa1041100 AT1G18960.1 44.660 103 54 2 14 116 10 109 8.65e-23 97.8
Msa1041100 AT2G23290.1 48.039 102 52 1 14 115 13 113 1.52e-22 97.1
Msa1041100 AT5G67300.1 47.273 110 55 2 14 121 6 114 2.11e-22 96.7
Msa1041100 AT5G58850.1 47.619 105 52 2 12 115 103 205 3.51e-22 97.8
Msa1041100 AT3G50060.1 48.039 102 52 1 14 115 6 106 5.17e-22 95.5
Msa1041100 AT1G66380.2 52.381 84 40 0 11 94 7 90 7.08e-22 89.7
Msa1041100 AT5G02320.3 43.478 115 56 2 12 122 65 174 3.10e-21 95.1
Msa1041100 AT5G02320.1 43.478 115 56 2 12 122 125 234 3.41e-21 95.5
Msa1041100 AT5G02320.2 43.478 115 56 2 12 122 125 234 3.41e-21 95.5
Msa1041100 AT3G09370.2 46.296 108 49 2 12 115 133 235 3.81e-21 95.1
Msa1041100 AT3G09370.1 46.296 108 49 2 12 115 128 230 3.81e-21 95.1
Msa1041100 AT3G09370.3 46.296 108 49 2 12 115 141 243 5.58e-21 94.7
Msa1041100 AT1G69560.1 36.301 146 81 4 9 147 102 242 7.34e-21 92.4
Msa1041100 AT1G69560.2 36.301 146 81 4 9 147 118 258 9.38e-21 92.4
Msa1041100 AT5G14750.4 57.627 59 25 0 58 116 1 59 2.40e-20 86.7
Msa1041100 AT5G14750.2 57.627 59 25 0 58 116 1 59 2.40e-20 86.7
Msa1041100 AT5G11050.1 45.631 103 53 2 14 115 105 205 2.50e-20 92.0
Msa1041100 AT5G11510.3 40.000 110 61 2 12 119 79 185 5.39e-20 92.4
Msa1041100 AT5G11510.1 40.000 110 61 2 12 119 79 185 5.39e-20 92.4
Msa1041100 AT5G11510.4 40.000 110 61 2 12 119 79 185 5.39e-20 92.4
Msa1041100 AT5G11510.2 40.000 110 61 2 12 119 79 185 8.02e-20 91.7
Msa1041100 AT5G11510.5 40.000 110 61 2 12 119 79 185 8.04e-20 91.7
Msa1041100 AT3G23250.2 45.055 91 49 1 58 147 1 91 1.24e-19 87.0
Msa1041100 AT1G17950.1 41.176 102 59 1 14 115 5 105 1.35e-19 87.4
Msa1041100 AT1G71030.2 50.000 76 38 0 51 126 5 80 4.29e-19 84.3
Msa1041100 AT1G71030.1 50.000 76 38 0 51 126 19 94 4.84e-19 84.7
Msa1041100 AT1G26780.2 39.655 116 64 3 12 126 96 206 2.10e-18 85.9
Msa1041100 AT1G26780.1 39.655 116 64 3 12 126 96 206 2.63e-18 84.3
Msa1041100 AT5G17800.1 39.806 103 61 1 14 116 93 194 3.10e-18 85.1
Msa1041100 AT4G32730.1 36.036 111 70 1 12 122 85 194 3.35e-18 86.7
Msa1041100 AT4G32730.5 36.036 111 70 1 12 122 85 194 3.69e-18 86.7
Msa1041100 AT4G32730.4 36.036 111 70 1 12 122 85 194 3.69e-18 86.7
Msa1041100 AT4G32730.3 36.036 111 70 1 12 122 85 194 3.69e-18 86.7
Msa1041100 AT4G32730.2 36.036 111 70 1 12 122 85 194 3.69e-18 86.7
Msa1041100 AT3G29020.1 38.053 113 66 2 14 126 65 173 3.83e-18 83.2
Msa1041100 AT3G29020.2 38.053 113 66 2 14 126 67 175 4.67e-18 84.3
Msa1041100 AT2G25230.1 37.288 118 72 2 8 125 20 135 8.73e-18 82.0
Msa1041100 AT4G33450.1 34.286 140 83 3 3 139 13 146 1.65e-17 81.6
Msa1041100 AT4G00540.2 40.179 112 63 2 11 119 100 210 3.38e-17 82.8
Msa1041100 AT4G00540.1 40.179 112 63 2 11 119 98 208 5.38e-17 82.4
Msa1041100 AT1G73410.2 42.308 104 57 2 14 116 6 107 6.40e-17 79.0
Msa1041100 AT1G73410.1 42.308 104 57 2 14 116 6 107 6.42e-17 79.7
Msa1041100 AT2G37630.1 36.082 97 60 1 14 108 4 100 3.88e-16 79.3
Msa1041100 AT5G40430.1 36.296 135 81 4 7 139 47 178 1.21e-14 73.6
Msa1041100 AT2G02820.3 37.234 94 58 1 17 110 33 125 2.28e-14 73.9
Msa1041100 AT2G02820.2 37.234 94 58 1 17 110 33 125 2.81e-14 74.3
Msa1041100 AT5G39700.1 35.294 102 65 1 15 116 57 157 2.83e-14 71.2
Msa1041100 AT2G02820.1 37.234 94 58 1 17 110 33 125 2.89e-14 74.3
Msa1041100 AT4G25560.2 67.391 46 15 0 70 115 2 47 4.46e-14 71.2
Msa1041100 AT1G14350.2 32.759 116 77 1 17 132 28 142 5.22e-14 73.6
Msa1041100 AT1G14350.1 32.759 116 77 1 17 132 28 142 5.22e-14 73.6
Msa1041100 AT5G59780.1 55.319 47 21 0 70 116 1 47 5.80e-13 67.0
Msa1041100 AT3G46130.2 55.319 47 21 0 70 116 1 47 1.98e-12 65.9
Msa1041100 AT5G61420.1 69.444 36 11 0 81 116 2 37 4.36e-11 63.5
Msa1041100 AT1G74650.3 54.545 44 20 0 77 120 1 44 5.20e-11 62.8
Msa1041100 AT3G28910.2 62.500 40 15 0 77 116 1 40 5.48e-11 62.8

Find 106 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGGTAATTGCAACCTATT+TGG 0.105295 7_1:+78600956 None:intergenic
AGCAAAATGCTTTGGTTTCT+TGG 0.128450 7_1:-78600484 Msa1041100:CDS
TTGCAGCAGGTTCACTTCTT+TGG 0.173439 7_1:+78601068 None:intergenic
AAATTACATATTCTTAGATA+TGG 0.236268 7_1:-78602655 Msa1041100:exon
CCCCATTTGCCTTAACATAT+TGG 0.262757 7_1:+78602559 None:intergenic
CCCATTTGCCTTAACATATT+GGG 0.269618 7_1:+78602560 None:intergenic
ATGGTTATGGGCTCAGTAAA+TGG 0.270999 7_1:-78601004 Msa1041100:CDS
TGGGTATACTGTTTAGCTTT+TGG 0.278349 7_1:-78600430 Msa1041100:three_prime_UTR
AGGCAAATGGGGAAGGTTCT+TGG 0.278979 7_1:-78602548 Msa1041100:CDS
GTCAAGATGCATGCTTCTTT+TGG 0.280452 7_1:-78602292 Msa1041100:CDS
ATATCTAAGAATATGTAATT+TGG 0.283274 7_1:+78602657 None:intergenic
TAATGTTGGAGATGGCTAAA+TGG 0.302631 7_1:+78602745 None:intergenic
AACTTCAAAGACTTCGGGTT+TGG 0.304668 7_1:-78600660 Msa1041100:CDS
TGCAGCAGGTTCACTTCTTT+GGG 0.310563 7_1:+78601069 None:intergenic
TGATATTATCATGGATACTT+TGG 0.310884 7_1:-78600834 Msa1041100:CDS
TCTTCAACTTCAAAGACTTC+GGG 0.340198 7_1:-78600665 Msa1041100:CDS
ACCCAATATGTTAAGGCAAA+TGG 0.344139 7_1:-78602561 Msa1041100:CDS
TGCACTAGAGAACGAGAAAA+TGG 0.352444 7_1:-78601023 Msa1041100:CDS
CCCAATATGTTAAGGCAAAT+GGG 0.355791 7_1:-78602560 Msa1041100:CDS
AGTTCTACCACCTTTACGTT+TGG 0.362051 7_1:+78601132 None:intergenic
AGAGAACGAGAAAATGGTTA+TGG 0.377024 7_1:-78601017 Msa1041100:CDS
ACGGTAATTGCAACCTATTT+GGG 0.383543 7_1:+78600957 None:intergenic
TCCTCAGAAGCAAAATGCTT+TGG 0.387350 7_1:-78600492 Msa1041100:CDS
GTTCTACCACCTTTACGTTT+GGG 0.399753 7_1:+78601133 None:intergenic
GACAAAGGCACCAACACAAA+TGG 0.402236 7_1:-78600749 Msa1041100:CDS
TTCTTCAACTTCAAAGACTT+CGG 0.422667 7_1:-78600666 Msa1041100:CDS
ATCTCGTTGTCTGTTCTGCC+TGG 0.428368 7_1:+78601277 None:intergenic
ATTTGAGAGCTGATCTCAAA+AGG 0.432934 7_1:-78602348 Msa1041100:CDS
TTTGGATGATAACTTGGATT+GGG 0.437238 7_1:-78600642 Msa1041100:CDS
AATTACATATTCTTAGATAT+GGG 0.440844 7_1:-78602654 Msa1041100:exon
CTCGTTCTCTAGTGCAGGGG+TGG 0.446834 7_1:+78601030 None:intergenic
GTAAAAGTTGTAGATTAAGA+TGG 0.447825 7_1:-78602378 Msa1041100:CDS
AATGTTGGAGATGGCTAAAT+GGG 0.448454 7_1:+78602746 None:intergenic
TTCGGGTTTGGATGATAACT+TGG 0.452649 7_1:-78600648 Msa1041100:CDS
TATAATTTGTTGATGTTCCT+CGG 0.454287 7_1:+78601209 None:intergenic
AAACATGCTAACTTGGTTGT+TGG 0.455589 7_1:-78600561 Msa1041100:CDS
TGAGAAAGTGGGTTTGAAGA+AGG 0.456681 7_1:-78602616 Msa1041100:CDS
TTTGAGAGCTGATCTCAAAA+GGG 0.462390 7_1:-78602347 Msa1041100:CDS
GAGAAAGTGGGTTTGAAGAA+GGG 0.470856 7_1:-78602615 Msa1041100:CDS
AGCTCCTTGTTGTGAGAAAG+TGG 0.474506 7_1:-78602628 Msa1041100:CDS
ACCAACACAAATGGAACAAA+GGG 0.476941 7_1:-78600740 Msa1041100:CDS
GAGAACGAGAAAATGGTTAT+GGG 0.478560 7_1:-78601016 Msa1041100:CDS
GCCCTTTGTTCCATTTGTGT+TGG 0.479392 7_1:+78600739 None:intergenic
TGGTTATGGGCTCAGTAAAT+GGG 0.483957 7_1:-78601003 Msa1041100:CDS
GGGAAATATTTCTTCTGAAG+AGG 0.485325 7_1:-78602326 Msa1041100:CDS
TGGCAAGTGACTTGCAATCA+AGG 0.485450 7_1:+78601297 None:intergenic
CCTTGTTCTAGTGGTGAAGA+TGG 0.485510 7_1:-78600980 Msa1041100:CDS
TTCTCTAGTGCAGGGGTGGG+TGG 0.491074 7_1:+78601034 None:intergenic
TCATTAATGACCTTCAGATC+TGG 0.498872 7_1:+78600878 None:intergenic
AAGATGAAAACATGCTAACT+TGG 0.500426 7_1:-78600568 Msa1041100:CDS
GTTGATTGTGACCGTATGTT+GGG 0.500866 7_1:-78600902 Msa1041100:CDS
TTGCAATTACCGTGCATTGA+CGG 0.501154 7_1:-78600947 Msa1041100:CDS
GTTTGGATGATAACTTGGAT+TGG 0.503745 7_1:-78600643 Msa1041100:CDS
TTGATTGCAAGTCACTTGCC+AGG 0.505909 7_1:-78601295 Msa1041100:CDS
GCTGAATCACTGAAATTAGC+TGG 0.507285 7_1:+78602776 None:intergenic
GTGGTGAAGATGGCCCAAAT+AGG 0.508419 7_1:-78600970 Msa1041100:CDS
TATTATCATGGATACTTTGG+AGG 0.511480 7_1:-78600831 Msa1041100:CDS
AATGTAGACAATAGTAATGT+TGG 0.512394 7_1:+78602731 None:intergenic
GGTTGTTGGATGATGATCAA+TGG 0.513716 7_1:-78600547 Msa1041100:CDS
GAAAGGTCAATCGTTGTTGT+GGG 0.516251 7_1:-78600594 Msa1041100:CDS
TATCATGGATACTTTGGAGG+TGG 0.519349 7_1:-78600828 Msa1041100:CDS
GTTGTTGGATGATGATCAAT+GGG 0.519759 7_1:-78600546 Msa1041100:CDS
CACTGAAATTAGCTGGCAAA+GGG 0.520188 7_1:+78602783 None:intergenic
GGATGATGATCAATGGGAAA+AGG 0.520555 7_1:-78600540 Msa1041100:CDS
ATGCCATTGTTGAATCAGAA+AGG 0.524551 7_1:-78600611 Msa1041100:CDS
TCAACTATGATTCCTTCTGA+TGG 0.529241 7_1:+78601163 None:intergenic
AGAAAGGTCAATCGTTGTTG+TGG 0.533000 7_1:-78600595 Msa1041100:CDS
GATCTGAAGGTCATTAATGA+TGG 0.535184 7_1:-78600875 Msa1041100:CDS
GACAATAGTAATGTTGGAGA+TGG 0.539631 7_1:+78602737 None:intergenic
GTAAATGGGCCTTGTTCTAG+TGG 0.541272 7_1:-78600989 Msa1041100:CDS
TGGGTTTGAAGAAGGGAAGA+TGG 0.549753 7_1:-78602608 Msa1041100:CDS
TCGTTCTCTAGTGCAGGGGT+GGG 0.551326 7_1:+78601031 None:intergenic
TTTGAAGGTTTGCTTAGATG+TGG 0.554593 7_1:-78602400 Msa1041100:intron
CACCAACACAAATGGAACAA+AGG 0.555866 7_1:-78600741 Msa1041100:CDS
TCACTGAAATTAGCTGGCAA+AGG 0.564618 7_1:+78602782 None:intergenic
ACTGGAACTCACACTTGAGT+AGG 0.564912 7_1:-78601246 Msa1041100:CDS
GAGATAGAGATTCCATCAGA+AGG 0.565117 7_1:-78601175 Msa1041100:CDS
TCAGATCTGGTCCCAACATA+CGG 0.570710 7_1:+78600891 None:intergenic
GGGAAGATGGACCGCAGAGG+AGG 0.573236 7_1:-78602595 Msa1041100:CDS
GATACACCTCCCAAACGTAA+AGG 0.576000 7_1:-78601142 Msa1041100:CDS
TATGTTAAGGCAAATGGGGA+AGG 0.579281 7_1:-78602555 Msa1041100:CDS
GGAAGTGTAACAATTGCAGC+AGG 0.585780 7_1:+78601055 None:intergenic
CAAATGGGGAAGGTTCTTGG+AGG 0.590009 7_1:-78602545 Msa1041100:CDS
AGTTGATTGTGACCGTATGT+TGG 0.594858 7_1:-78600903 Msa1041100:CDS
TGACCTTTCTGATTCAACAA+TGG 0.599595 7_1:+78600608 None:intergenic
CCATCTTCACCACTAGAACA+AGG 0.602002 7_1:+78600980 None:intergenic
AGAAAGTAATGATGAAAATG+TGG 0.603870 7_1:-78600795 Msa1041100:CDS
CCAATATGTTAAGGCAAATG+GGG 0.604912 7_1:-78602559 Msa1041100:CDS
AAGGTGGTAGAACTAGTCGA+TGG 0.608334 7_1:-78601123 Msa1041100:CDS
GACGAATCAATGTTCGAATG+AGG 0.609950 7_1:-78600696 Msa1041100:CDS
GCTCCTTGTTGTGAGAAAGT+GGG 0.610413 7_1:-78602627 Msa1041100:CDS
AGGAAAGTTTACAGCTTCCG+AGG 0.615687 7_1:-78601226 Msa1041100:CDS
ATATAGTGTCATATACATAG+TGG 0.618072 7_1:-78602680 Msa1041100:five_prime_UTR
TTGAGAGCTGATCTCAAAAG+GGG 0.619723 7_1:-78602346 Msa1041100:CDS
CTACCACCTTTACGTTTGGG+AGG 0.625375 7_1:+78601136 None:intergenic
GGTTGTGATTAATGAAAGAG+TGG 0.625942 7_1:-78600774 Msa1041100:CDS
AGGTGGTAGAACTAGTCGAT+GGG 0.631157 7_1:-78601122 Msa1041100:CDS
AAACCCACTTTCTCACAACA+AGG 0.632503 7_1:+78602624 None:intergenic
CAAAATTTCATCCTCCTCTG+CGG 0.639762 7_1:+78602584 None:intergenic
TTTCTCGTTCTCTAGTGCAG+GGG 0.641292 7_1:+78601027 None:intergenic
TATGTTGGGACCAGATCTGA+AGG 0.647079 7_1:-78600888 Msa1041100:CDS
TTGTGATTAATGAAAGAGTG+GGG 0.673933 7_1:-78600772 Msa1041100:CDS
GTTGTGATTAATGAAAGAGT+GGG 0.684483 7_1:-78600773 Msa1041100:CDS
ACACCTCCCAAACGTAAAGG+TGG 0.689755 7_1:-78601139 Msa1041100:CDS
GAAGGGAAGATGGACCGCAG+AGG 0.690611 7_1:-78602598 Msa1041100:CDS
TGTGATTAATGAAAGAGTGG+GGG 0.736683 7_1:-78600771 Msa1041100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTCAAAAAAATAATATTTA+AGG + chr7_1:78600841-78600860 None:intergenic 10.0%
!!! CTATAAAATGAAATTTTTTA+TGG - chr7_1:78601067-78601086 Msa1041100:CDS 10.0%
!!! TTAAAAATGTTTTGTTTTTT+AGG + chr7_1:78601404-78601423 None:intergenic 10.0%
!!! TTTTGTGTAAAAATATAAAA+CGG + chr7_1:78602732-78602751 None:intergenic 10.0%
!! ATATCTAAGAATATGTAATT+TGG + chr7_1:78600442-78600461 None:intergenic 15.0%
!! AAATTACATATTCTTAGATA+TGG - chr7_1:78600441-78600460 Msa1041100:three_prime_UTR 15.0%
!! AATTACATATTCTTAGATAT+GGG - chr7_1:78600442-78600461 Msa1041100:three_prime_UTR 15.0%
!! TTGTCAAAAACAAATAATAA+AGG + chr7_1:78600989-78601008 None:intergenic 15.0%
!!! ATTATTTGTTTTTGACAAAA+TGG - chr7_1:78600991-78601010 Msa1041100:CDS 15.0%
!!! TTTTATTTTCTCTCTATATA+TGG - chr7_1:78601331-78601350 Msa1041100:intron 15.0%
!!! AGATTTTAATGATATTATCA+TGG - chr7_1:78602253-78602272 Msa1041100:intron 15.0%
!! AACTAAACAAAACAAGAAAA+CGG + chr7_1:78600637-78600656 None:intergenic 20.0%
!!! ATATAACCGACATTTTATTT+TGG - chr7_1:78600670-78600689 Msa1041100:CDS 20.0%
!!! TATAACCGACATTTTATTTT+GGG - chr7_1:78600671-78600690 Msa1041100:CDS 20.0%
!! TTAAAAACATAACTATAACC+TGG - chr7_1:78602703-78602722 Msa1041100:five_prime_UTR 20.0%
!! TAAAAACATAACTATAACCT+GGG - chr7_1:78602704-78602723 Msa1041100:five_prime_UTR 20.0%
! AATGTAGACAATAGTAATGT+TGG + chr7_1:78600368-78600387 None:intergenic 25.0%
! ATATAGTGTCATATACATAG+TGG - chr7_1:78600416-78600435 Msa1041100:three_prime_UTR 25.0%
!!! AATTTTGACCCAATATGTTA+AGG - chr7_1:78600528-78600547 Msa1041100:CDS 25.0%
!!! TTTTTTTCCCTTTTGCTAAT+AGG - chr7_1:78600609-78600628 Msa1041100:CDS 25.0%
!!! TTTTTTCCCTTTTGCTAATA+GGG - chr7_1:78600610-78600629 Msa1041100:CDS 25.0%
!!! ATAACCGACATTTTATTTTG+GGG - chr7_1:78600672-78600691 Msa1041100:CDS 25.0%
! GTAAAAGTTGTAGATTAAGA+TGG - chr7_1:78600718-78600737 Msa1041100:CDS 25.0%
! TTGAGATTTACTTCCATATT+TGG - chr7_1:78600855-78600874 Msa1041100:CDS 25.0%
!!! ATGATCTGTTTTTCCAAATA+TGG + chr7_1:78600871-78600890 None:intergenic 25.0%
! AATAAACAGAATTTCTCATG+GGG + chr7_1:78600897-78600916 None:intergenic 25.0%
! CAATAAACAGAATTTCTCAT+GGG + chr7_1:78600898-78600917 None:intergenic 25.0%
! TCAATAAACAGAATTTCTCA+TGG + chr7_1:78600899-78600918 None:intergenic 25.0%
! AGTAAGAAGAAATTAAGCAA+CGG - chr7_1:78600934-78600953 Msa1041100:CDS 25.0%
!!! TTTGTTTTTGACAAAATGGA+AGG - chr7_1:78600995-78601014 Msa1041100:CDS 25.0%
!!! TTGTTTTTGACAAAATGGAA+GGG - chr7_1:78600996-78601015 Msa1041100:CDS 25.0%
! TTAGTATGCAGTCAATTTAA+GGG + chr7_1:78601106-78601125 None:intergenic 25.0%
!!! AGTGGGATTTTTTTTTTTGA+TGG - chr7_1:78601129-78601148 Msa1041100:CDS 25.0%
!!! GTGGGATTTTTTTTTTTGAT+GGG - chr7_1:78601130-78601149 Msa1041100:CDS 25.0%
!! TTTTTCTTTTCTAATGAGAC+AGG + chr7_1:78601439-78601458 None:intergenic 25.0%
!!! ATTTTTTTCGTTACTATTCG+AGG + chr7_1:78601547-78601566 None:intergenic 25.0%
! ACTAGAAAATGAAATGACAA+AGG - chr7_1:78601748-78601767 Msa1041100:intron 25.0%
!! AATGAAATGACAAAGGTTTT+TGG - chr7_1:78601755-78601774 Msa1041100:intron 25.0%
!!! TATAATTTGTTGATGTTCCT+CGG + chr7_1:78601890-78601909 None:intergenic 25.0%
! TGATATTATCATGGATACTT+TGG - chr7_1:78602262-78602281 Msa1041100:intron 25.0%
! AGAAAGTAATGATGAAAATG+TGG - chr7_1:78602301-78602320 Msa1041100:CDS 25.0%
!!! AACTTTAGCACTTTACTTTT+TGG - chr7_1:78602646-78602665 Msa1041100:exon 25.0%
!!! ACTTTAGCACTTTACTTTTT+GGG - chr7_1:78602647-78602666 Msa1041100:exon 25.0%
!!! TTTAGCTTTTGGAATGTTTT+GGG - chr7_1:78602677-78602696 Msa1041100:five_prime_UTR 25.0%
! ATAGTGATACCTGCATTTTT+GGG + chr7_1:78600583-78600602 None:intergenic 30.0%
! AATAGTGATACCTGCATTTT+TGG + chr7_1:78600584-78600603 None:intergenic 30.0%
!!! TAACCGACATTTTATTTTGG+GGG - chr7_1:78600673-78600692 Msa1041100:CDS 30.0%
AAACCCCCAAAATAAAATGT+CGG + chr7_1:78600679-78600698 None:intergenic 30.0%
!!! ATTTTATTTTGGGGGTTTGA+AGG - chr7_1:78600681-78600700 Msa1041100:CDS 30.0%
CTTAGTATGCAGTCAATTTA+AGG + chr7_1:78601107-78601126 None:intergenic 30.0%
!!! TGCTCATGTGCTATTTTTTA+AGG + chr7_1:78601293-78601312 None:intergenic 30.0%
!! ATGATATGTTTTTGTCGAAG+TGG - chr7_1:78601501-78601520 Msa1041100:intron 30.0%
CTGTCATAATGTCAAACAAA+TGG - chr7_1:78601574-78601593 Msa1041100:intron 30.0%
!! ATTTTTCTTTTTCGTGACAG+TGG + chr7_1:78601627-78601646 None:intergenic 30.0%
CAATTGAAGCAAAATACACA+AGG + chr7_1:78601702-78601721 None:intergenic 30.0%
ACAACGAGATTAAAAACTAC+TGG - chr7_1:78601832-78601851 Msa1041100:intron 30.0%
TATTATCATGGATACTTTGG+AGG - chr7_1:78602265-78602284 Msa1041100:intron 30.0%
GTTGTGATTAATGAAAGAGT+GGG - chr7_1:78602323-78602342 Msa1041100:CDS 30.0%
TTGTGATTAATGAAAGAGTG+GGG - chr7_1:78602324-78602343 Msa1041100:CDS 30.0%
TTCTTCAACTTCAAAGACTT+CGG - chr7_1:78602430-78602449 Msa1041100:intron 30.0%
TTTGGATGATAACTTGGATT+GGG - chr7_1:78602454-78602473 Msa1041100:intron 30.0%
AAGATGAAAACATGCTAACT+TGG - chr7_1:78602528-78602547 Msa1041100:CDS 30.0%
!!! GTTTAGCTTTTGGAATGTTT+TGG - chr7_1:78602676-78602695 Msa1041100:five_prime_UTR 30.0%
!!! TTAGCTTTTGGAATGTTTTG+GGG - chr7_1:78602678-78602697 Msa1041100:five_prime_UTR 30.0%
AAAAATATAAAACGGTACCC+AGG + chr7_1:78602724-78602743 None:intergenic 30.0%
AATGTTGGAGATGGCTAAAT+GGG + chr7_1:78600353-78600372 None:intergenic 35.0%
TAATGTTGGAGATGGCTAAA+TGG + chr7_1:78600354-78600373 None:intergenic 35.0%
GACAATAGTAATGTTGGAGA+TGG + chr7_1:78600362-78600381 None:intergenic 35.0%
ACCCAATATGTTAAGGCAAA+TGG - chr7_1:78600535-78600554 Msa1041100:CDS 35.0%
CCCATTTGCCTTAACATATT+GGG + chr7_1:78600539-78600558 None:intergenic 35.0%
CCCAATATGTTAAGGCAAAT+GGG - chr7_1:78600536-78600555 Msa1041100:CDS 35.0%
CCAATATGTTAAGGCAAATG+GGG - chr7_1:78600537-78600556 Msa1041100:CDS 35.0%
! TTTGAAGGTTTGCTTAGATG+TGG - chr7_1:78600696-78600715 Msa1041100:CDS 35.0%
ATTTGAGAGCTGATCTCAAA+AGG - chr7_1:78600748-78600767 Msa1041100:CDS 35.0%
TTTGAGAGCTGATCTCAAAA+GGG - chr7_1:78600749-78600768 Msa1041100:CDS 35.0%
! GGGAAATATTTCTTCTGAAG+AGG - chr7_1:78600770-78600789 Msa1041100:CDS 35.0%
! TAAAATTCTCAGAGTGTCAG+AGG + chr7_1:78601190-78601209 None:intergenic 35.0%
! AAGAAGCTCTTTTGTCATAG+TGG - chr7_1:78601649-78601668 Msa1041100:intron 35.0%
! AGAAGCTCTTTTGTCATAGT+GGG - chr7_1:78601650-78601669 Msa1041100:intron 35.0%
!!! TGACAAAGGTTTTTGGCTTT+TGG - chr7_1:78601762-78601781 Msa1041100:intron 35.0%
!!! TTTTGGCTTTTGGTAACTTC+AGG - chr7_1:78601772-78601791 Msa1041100:intron 35.0%
TCAACTATGATTCCTTCTGA+TGG + chr7_1:78601936-78601955 None:intergenic 35.0%
AGAGAACGAGAAAATGGTTA+TGG - chr7_1:78602079-78602098 Msa1041100:intron 35.0%
GAGAACGAGAAAATGGTTAT+GGG - chr7_1:78602080-78602099 Msa1041100:intron 35.0%
ACGGTAATTGCAACCTATTT+GGG + chr7_1:78602142-78602161 None:intergenic 35.0%
! TTATTTTCACCGTCAATGCA+CGG + chr7_1:78602161-78602180 None:intergenic 35.0%
TCATTAATGACCTTCAGATC+TGG + chr7_1:78602221-78602240 None:intergenic 35.0%
GATCTGAAGGTCATTAATGA+TGG - chr7_1:78602221-78602240 Msa1041100:intron 35.0%
GGTTGTGATTAATGAAAGAG+TGG - chr7_1:78602322-78602341 Msa1041100:CDS 35.0%
TGTGATTAATGAAAGAGTGG+GGG - chr7_1:78602325-78602344 Msa1041100:CDS 35.0%
ACCAACACAAATGGAACAAA+GGG - chr7_1:78602356-78602375 Msa1041100:CDS 35.0%
TCTTCAACTTCAAAGACTTC+GGG - chr7_1:78602431-78602450 Msa1041100:intron 35.0%
GTTTGGATGATAACTTGGAT+TGG - chr7_1:78602453-78602472 Msa1041100:intron 35.0%
ATGCCATTGTTGAATCAGAA+AGG - chr7_1:78602485-78602504 Msa1041100:intron 35.0%
TGACCTTTCTGATTCAACAA+TGG + chr7_1:78602491-78602510 None:intergenic 35.0%
AAACATGCTAACTTGGTTGT+TGG - chr7_1:78602535-78602554 Msa1041100:CDS 35.0%
GTTGTTGGATGATGATCAAT+GGG - chr7_1:78602550-78602569 Msa1041100:CDS 35.0%
! AGCAAAATGCTTTGGTTTCT+TGG - chr7_1:78602612-78602631 Msa1041100:CDS 35.0%
!!! TGGGTATACTGTTTAGCTTT+TGG - chr7_1:78602666-78602685 Msa1041100:five_prime_UTR 35.0%
CACTGAAATTAGCTGGCAAA+GGG + chr7_1:78600316-78600335 None:intergenic 40.0%
TCACTGAAATTAGCTGGCAA+AGG + chr7_1:78600317-78600336 None:intergenic 40.0%
GCTGAATCACTGAAATTAGC+TGG + chr7_1:78600323-78600342 None:intergenic 40.0%
AAACCCACTTTCTCACAACA+AGG + chr7_1:78600475-78600494 None:intergenic 40.0%
! TGAGAAAGTGGGTTTGAAGA+AGG - chr7_1:78600480-78600499 Msa1041100:CDS 40.0%
! GAGAAAGTGGGTTTGAAGAA+GGG - chr7_1:78600481-78600500 Msa1041100:CDS 40.0%
CAAAATTTCATCCTCCTCTG+CGG + chr7_1:78600515-78600534 None:intergenic 40.0%
CCCCATTTGCCTTAACATAT+TGG + chr7_1:78600540-78600559 None:intergenic 40.0%
TATGTTAAGGCAAATGGGGA+AGG - chr7_1:78600541-78600560 Msa1041100:CDS 40.0%
AACGGTCCCTATTAGCAAAA+GGG + chr7_1:78600619-78600638 None:intergenic 40.0%
AAACGGTCCCTATTAGCAAA+AGG + chr7_1:78600620-78600639 None:intergenic 40.0%
TTGAGAGCTGATCTCAAAAG+GGG - chr7_1:78600750-78600769 Msa1041100:CDS 40.0%
! GTCAAGATGCATGCTTCTTT+TGG - chr7_1:78600804-78600823 Msa1041100:CDS 40.0%
TTGACTGCATACTAAGTGAG+TGG - chr7_1:78601111-78601130 Msa1041100:CDS 40.0%
TGACTGCATACTAAGTGAGT+GGG - chr7_1:78601112-78601131 Msa1041100:CDS 40.0%
GAGATAGAGATTCCATCAGA+AGG - chr7_1:78601921-78601940 Msa1041100:intron 40.0%
GTTCTACCACCTTTACGTTT+GGG + chr7_1:78601966-78601985 None:intergenic 40.0%
AGTTCTACCACCTTTACGTT+TGG + chr7_1:78601967-78601986 None:intergenic 40.0%
! TTTTCTCGTTCTCTAGTGCA+GGG + chr7_1:78602073-78602092 None:intergenic 40.0%
! ATTTTCTCGTTCTCTAGTGC+AGG + chr7_1:78602074-78602093 None:intergenic 40.0%
TGCACTAGAGAACGAGAAAA+TGG - chr7_1:78602073-78602092 Msa1041100:intron 40.0%
ATGGTTATGGGCTCAGTAAA+TGG - chr7_1:78602092-78602111 Msa1041100:intron 40.0%
TGGTTATGGGCTCAGTAAAT+GGG - chr7_1:78602093-78602112 Msa1041100:intron 40.0%
CACGGTAATTGCAACCTATT+TGG + chr7_1:78602143-78602162 None:intergenic 40.0%
TTGCAATTACCGTGCATTGA+CGG - chr7_1:78602149-78602168 Msa1041100:intron 40.0%
AGTTGATTGTGACCGTATGT+TGG - chr7_1:78602193-78602212 Msa1041100:intron 40.0%
GTTGATTGTGACCGTATGTT+GGG - chr7_1:78602194-78602213 Msa1041100:intron 40.0%
! TATCATGGATACTTTGGAGG+TGG - chr7_1:78602268-78602287 Msa1041100:intron 40.0%
CACCAACACAAATGGAACAA+AGG - chr7_1:78602355-78602374 Msa1041100:CDS 40.0%
GACGAATCAATGTTCGAATG+AGG - chr7_1:78602400-78602419 Msa1041100:intron 40.0%
! AACTTCAAAGACTTCGGGTT+TGG - chr7_1:78602436-78602455 Msa1041100:intron 40.0%
! TTCGGGTTTGGATGATAACT+TGG - chr7_1:78602448-78602467 Msa1041100:intron 40.0%
AGAAAGGTCAATCGTTGTTG+TGG - chr7_1:78602501-78602520 Msa1041100:intron 40.0%
GAAAGGTCAATCGTTGTTGT+GGG - chr7_1:78602502-78602521 Msa1041100:intron 40.0%
GGTTGTTGGATGATGATCAA+TGG - chr7_1:78602549-78602568 Msa1041100:CDS 40.0%
GGATGATGATCAATGGGAAA+AGG - chr7_1:78602556-78602575 Msa1041100:CDS 40.0%
TCCTCAGAAGCAAAATGCTT+TGG - chr7_1:78602604-78602623 Msa1041100:CDS 40.0%
!! ACCAAAGCATTTTGCTTCTG+AGG + chr7_1:78602608-78602627 None:intergenic 40.0%
! AGCTCCTTGTTGTGAGAAAG+TGG - chr7_1:78600468-78600487 Msa1041100:exon 45.0%
! GCTCCTTGTTGTGAGAAAGT+GGG - chr7_1:78600469-78600488 Msa1041100:exon 45.0%
TGGGTTTGAAGAAGGGAAGA+TGG - chr7_1:78600488-78600507 Msa1041100:CDS 45.0%
AGGTCATTGCCCAAAAATGC+AGG - chr7_1:78600571-78600590 Msa1041100:CDS 45.0%
! TGCATGCTTCTTTTGGCAAC+AGG - chr7_1:78600811-78600830 Msa1041100:CDS 45.0%
!! TCTTTTTCGTGACAGTGGCA+AGG + chr7_1:78601622-78601641 None:intergenic 45.0%
!! TGGCTTTTGGTAACTTCAGG+TGG - chr7_1:78601775-78601794 Msa1041100:intron 45.0%
! TGGCAAGTGACTTGCAATCA+AGG + chr7_1:78601802-78601821 None:intergenic 45.0%
TTGATTGCAAGTCACTTGCC+AGG - chr7_1:78601801-78601820 Msa1041100:intron 45.0%
ACTGGAACTCACACTTGAGT+AGG - chr7_1:78601850-78601869 Msa1041100:intron 45.0%
AGGAAAGTTTACAGCTTCCG+AGG - chr7_1:78601870-78601889 Msa1041100:intron 45.0%
GATACACCTCCCAAACGTAA+AGG - chr7_1:78601954-78601973 Msa1041100:intron 45.0%
AAGGTGGTAGAACTAGTCGA+TGG - chr7_1:78601973-78601992 Msa1041100:intron 45.0%
AGGTGGTAGAACTAGTCGAT+GGG - chr7_1:78601974-78601993 Msa1041100:intron 45.0%
TGCAGCAGGTTCACTTCTTT+GGG + chr7_1:78602030-78602049 None:intergenic 45.0%
TTGCAGCAGGTTCACTTCTT+TGG + chr7_1:78602031-78602050 None:intergenic 45.0%
! GGAAGTGTAACAATTGCAGC+AGG + chr7_1:78602044-78602063 None:intergenic 45.0%
TTTCTCGTTCTCTAGTGCAG+GGG + chr7_1:78602072-78602091 None:intergenic 45.0%
!! GTAAATGGGCCTTGTTCTAG+TGG - chr7_1:78602107-78602126 Msa1041100:intron 45.0%
CCATCTTCACCACTAGAACA+AGG + chr7_1:78602119-78602138 None:intergenic 45.0%
CCTTGTTCTAGTGGTGAAGA+TGG - chr7_1:78602116-78602135 Msa1041100:intron 45.0%
TCAGATCTGGTCCCAACATA+CGG + chr7_1:78602208-78602227 None:intergenic 45.0%
TATGTTGGGACCAGATCTGA+AGG - chr7_1:78602208-78602227 Msa1041100:intron 45.0%
AATGAAAGAGTGGGGGACAA+AGG - chr7_1:78602332-78602351 Msa1041100:CDS 45.0%
!! GACAAAGGCACCAACACAAA+TGG - chr7_1:78602347-78602366 Msa1041100:CDS 45.0%
GCCCTTTGTTCCATTTGTGT+TGG + chr7_1:78602360-78602379 None:intergenic 45.0%
!!! TATAAAATGAAATTTTTTAT+GGG - chr7_1:78601068-78601087 Msa1041100:CDS 5.0%
AGGCAAATGGGGAAGGTTCT+TGG - chr7_1:78600548-78600567 Msa1041100:CDS 50.0%
CAAATGGGGAAGGTTCTTGG+AGG - chr7_1:78600551-78600570 Msa1041100:CDS 50.0%
ATCTCGTTGTCTGTTCTGCC+TGG + chr7_1:78601822-78601841 None:intergenic 50.0%
ACACCTCCCAAACGTAAAGG+TGG - chr7_1:78601957-78601976 Msa1041100:intron 50.0%
CTACCACCTTTACGTTTGGG+AGG + chr7_1:78601963-78601982 None:intergenic 50.0%
GTGGTGAAGATGGCCCAAAT+AGG - chr7_1:78602126-78602145 Msa1041100:intron 50.0%
TCGTTCTCTAGTGCAGGGGT+GGG + chr7_1:78602068-78602087 None:intergenic 55.0%
GAAGGGAAGATGGACCGCAG+AGG - chr7_1:78600498-78600517 Msa1041100:CDS 60.0%
TTCTCTAGTGCAGGGGTGGG+TGG + chr7_1:78602065-78602084 None:intergenic 60.0%
CTCGTTCTCTAGTGCAGGGG+TGG + chr7_1:78602069-78602088 None:intergenic 60.0%
GGGAAGATGGACCGCAGAGG+AGG - chr7_1:78600501-78600520 Msa1041100:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78600296 78602822 78600296 ID=Msa1041100;Name=Msa1041100
chr7_1 mRNA 78600296 78602822 78600296 ID=Msa1041100-mRNA-1;Parent=Msa1041100;Name=Msa1041100-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|1|1|1|1|1|3|182|369
chr7_1 exon 78600296 78601324 78600296 ID=Msa1041100-mRNA-1:exon:21057;Parent=Msa1041100-mRNA-1
chr7_1 exon 78602286 78602415 78602286 ID=Msa1041100-mRNA-1:exon:21056;Parent=Msa1041100-mRNA-1
chr7_1 exon 78602526 78602822 78602526 ID=Msa1041100-mRNA-1:exon:21055;Parent=Msa1041100-mRNA-1
chr7_1 five_prime_UTR 78602659 78602822 78602659 ID=Msa1041100-mRNA-1:five_prime_utr;Parent=Msa1041100-mRNA-1
chr7_1 CDS 78602526 78602658 78602526 ID=Msa1041100-mRNA-1:cds;Parent=Msa1041100-mRNA-1
chr7_1 CDS 78602286 78602415 78602286 ID=Msa1041100-mRNA-1:cds;Parent=Msa1041100-mRNA-1
chr7_1 CDS 78600478 78601324 78600478 ID=Msa1041100-mRNA-1:cds;Parent=Msa1041100-mRNA-1
chr7_1 three_prime_UTR 78600296 78600477 78600296 ID=Msa1041100-mRNA-1:three_prime_utr;Parent=Msa1041100-mRNA-1
Gene Sequence

>Msa1041100

ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGTTTGAAGAAGGGAAGATGGACCGCAGAGGAGGATGAAATTTTGACCCAATATGTTAAGGCAAATGGGGAAGGTTCTTGGAGGTCATTGCCCAAAAATGCAGGTTTGCTTAGATGTGGTAAAAGTTGTAGATTAAGATGGATTAACTATTTGAGAGCTGATCTCAAAAGGGGAAATATTTCTTCTGAAGAGGAAAGTATCATTGTCAAGATGCATGCTTCTTTTGGCAACAGGTGGTCCTTGATTGCAAGTCACTTGCCAGGCAGAACAGACAACGAGATTAAAAACTACTGGAACTCACACTTGAGTAGGAAAGTTTACAGCTTCCGAGGAACATCAACAAATTATAATAATATCAAAGAGATAGAGATTCCATCAGAAGGAATCATAGTTGATACACCTCCCAAACGTAAAGGTGGTAGAACTAGTCGATGGGCTATGAAGAAGAACAAACGATATAGTATATCCCAAAGAAGTGAACCTGCTGCAATTGTTACACTTCCACCCACCCCTGCACTAGAGAACGAGAAAATGGTTATGGGCTCAGTAAATGGGCCTTGTTCTAGTGGTGAAGATGGCCCAAATAGGTTGCAATTACCGTGCATTGACGGTGAAAATAATAGTAGTATTGAAGTTGATTGTGACCGTATGTTGGGACCAGATCTGAAGGTCATTAATGATGGTGAGTTGTTAGATTTTAATGATATTATCATGGATACTTTGGAGGTGGAAGAAGAAAAAGAAAGTAATGATGAAAATGTGGTTGTGATTAATGAAAGAGTGGGGGACAAAGGCACCAACACAAATGGAACAAAGGGCATAGAGAGAAATAACAATGTGACGAATCAATGTTCGAATGAGGAGTTCAATTCTTCAACTTCAAAGACTTCGGGTTTGGATGATAACTTGGATTGGGAGAGTGTTATGCCATTGTTGAATCAGAAAGGTCAATCGTTGTTGTGGGAGCAAGATGAAAACATGCTAACTTGGTTGTTGGATGATGATCAATGGGAAAAGGATTTTCAGAGATTTCGAGATATTGATCCTCAGAAGCAAAATGCTTTGGTTTCTTGGTTTTAA
Protein sequence

>Msa1041100

MGRAPCCEKVGLKKGRWTAEEDEILTQYVKANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISSEEESIIVKMHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSFRGTSTNYNNIKEIEIPSEGIIVDTPPKRKGGRTSRWAMKKNKRYSISQRSEPAAIVTLPPTPALENEKMVMGSVNGPCSSGEDGPNRLQLPCIDGENNSSIEVDCDRMLGPDLKVINDGELLDFNDIIMDTLEVEEEKESNDENVVVINERVGDKGTNTNGTKGIERNNNVTNQCSNEEFNSSTSKTSGLDDNLDWESVMPLLNQKGQSLLWEQDENMLTWLLDDDQWEKDFQRFRDIDPQKQNALVSWF*