AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435670 MtrunA17_Chr3g0137831 96.667 210 5 1 77 286 1 208 1.32e-151 422
Msa1435670 MtrunA17_Chr4g0063751 57.692 208 77 4 80 286 3 200 5.72e-71 218
Msa1435670 MtrunA17_Chr4g0003421 57.339 218 73 4 76 277 33 246 7.03e-69 214
Msa1435670 MtrunA17_Chr1g0149331 62.189 201 70 4 77 275 1 197 5.61e-68 209
Msa1435670 MtrunA17_Chr2g0333011 55.556 198 61 3 81 277 4 175 8.95e-66 203
Msa1435670 MtrunA17_Chr4g0002631 52.174 115 36 2 77 191 1 96 2.51e-28 107
Msa1435670 MtrunA17_Chr3g0137174 69.118 68 21 0 77 144 1 68 6.66e-28 106
Msa1435670 MtrunA17_Chr4g0017851 39.669 121 68 1 25 140 54 174 1.26e-22 95.1
Msa1435670 MtrunA17_Chr8g0375031 64.789 71 22 1 82 152 123 190 3.93e-22 92.0
Msa1435670 MtrunA17_Chr8g0383591 61.538 65 25 0 76 140 137 201 8.62e-21 90.1
Msa1435670 MtrunA17_Chr7g0221471 58.108 74 28 1 70 140 34 107 9.40e-21 87.0
Msa1435670 MtrunA17_Chr3g0134161 42.157 102 59 0 62 163 23 124 4.04e-20 85.1
Msa1435670 MtrunA17_Chr1g0196781 44.915 118 57 3 65 182 135 244 4.52e-20 88.2
Msa1435670 MtrunA17_Chr4g0044911 61.111 72 25 1 84 152 96 167 5.92e-20 86.3
Msa1435670 MtrunA17_Chr5g0432821 48.684 76 36 1 71 143 108 183 6.89e-20 87.0
Msa1435670 MtrunA17_Chr3g0099871 44.444 99 49 1 70 162 13 111 8.57e-20 85.9
Msa1435670 MtrunA17_Chr3g0126321 59.420 69 28 0 71 139 100 168 1.20e-19 87.4
Msa1435670 MtrunA17_Chr3g0115631 55.556 72 32 0 81 152 147 218 1.79e-19 87.0
Msa1435670 MtrunA17_Chr4g0044881 66.102 59 20 0 83 141 113 171 2.74e-19 84.7
Msa1435670 MtrunA17_Chr7g0221501 56.000 75 30 1 69 140 33 107 3.20e-19 82.8
Msa1435670 MtrunA17_Chr4g0044901 67.241 58 19 0 84 141 96 153 3.46e-19 84.3
Msa1435670 MtrunA17_Chr2g0316931 55.714 70 31 0 72 141 19 88 4.31e-19 83.6
Msa1435670 MtrunA17_Chr4g0044871 65.517 58 20 0 84 141 96 153 5.58e-19 83.6
Msa1435670 MtrunA17_Chr5g0396911 55.128 78 32 1 82 156 110 187 6.02e-19 85.1
Msa1435670 MtrunA17_Chr5g0425561 49.412 85 39 1 65 145 150 234 6.81e-19 85.5
Msa1435670 MtrunA17_Chr6g0486701 53.521 71 33 0 84 154 44 114 1.72e-18 82.0
Msa1435670 MtrunA17_Chr2g0282651 42.857 119 55 3 35 140 8 126 1.84e-18 82.8
Msa1435670 MtrunA17_Chr5g0438801 49.333 75 38 0 70 144 37 111 2.19e-18 83.2
Msa1435670 MtrunA17_Chr7g0232261 63.158 57 21 0 84 140 61 117 2.91e-18 81.6
Msa1435670 MtrunA17_Chr4g0055951 54.930 71 32 0 84 154 74 144 3.13e-18 82.0
Msa1435670 MtrunA17_Chr8g0387801 41.085 129 65 3 82 199 105 233 3.53e-18 82.8
Msa1435670 MtrunA17_Chr5g0438831 52.703 74 33 1 70 141 30 103 3.75e-18 82.4
Msa1435670 MtrunA17_Chr8g0340311 50.685 73 36 0 84 156 47 119 4.03e-18 80.9
Msa1435670 MtrunA17_Chr8g0390091 63.158 57 21 0 84 140 37 93 5.73e-18 80.9
Msa1435670 MtrunA17_Chr3g0140161 54.930 71 32 0 84 154 43 113 5.98e-18 79.7
Msa1435670 MtrunA17_Chr8g0382491 56.061 66 29 0 81 146 110 175 6.85e-18 81.6
Msa1435670 MtrunA17_Chr8g0344961 52.778 72 34 0 69 140 109 180 9.04e-18 82.4
Msa1435670 MtrunA17_Chr2g0324131 57.143 63 27 0 78 140 212 274 1.09e-17 82.4
Msa1435670 MtrunA17_Chr7g0217991 60.317 63 24 1 82 143 40 102 1.14e-17 82.8
Msa1435670 MtrunA17_Chr2g0331231 46.988 83 33 1 69 140 15 97 1.32e-17 79.3
Msa1435670 MtrunA17_Chr5g0399441 52.113 71 34 0 84 154 28 98 1.43e-17 78.6
Msa1435670 MtrunA17_Chr2g0295421 63.158 57 21 0 84 140 96 152 1.45e-17 80.5
Msa1435670 MtrunA17_Chr7g0253424 62.712 59 22 0 81 139 36 94 1.56e-17 80.5
Msa1435670 MtrunA17_Chr7g0275841 57.895 57 24 0 84 140 28 84 1.59e-17 78.2
Msa1435670 MtrunA17_Chr6g0453661 60.317 63 24 1 82 143 36 98 1.60e-17 82.0
Msa1435670 MtrunA17_Chr1g0195151 52.055 73 35 0 68 140 61 133 1.61e-17 80.9
Msa1435670 MtrunA17_Chr2g0334031 52.778 72 34 0 69 140 102 173 2.89e-17 80.9
Msa1435670 MtrunA17_Chr2g0323171 63.158 57 21 0 84 140 65 121 3.21e-17 77.8
Msa1435670 MtrunA17_Chr4g0062551 45.977 87 46 1 68 154 38 123 3.43e-17 76.6
Msa1435670 MtrunA17_Chr5g0437671 63.793 58 21 0 83 140 84 141 3.67e-17 80.9
Msa1435670 MtrunA17_Chr1g0158971 48.913 92 39 3 82 165 113 204 4.13e-17 80.1
Msa1435670 MtrunA17_Chr5g0437371 54.545 66 30 0 74 139 56 121 4.41e-17 80.1
Msa1435670 MtrunA17_Chr8g0346741 42.105 95 52 1 46 140 4 95 4.46e-17 77.0
Msa1435670 MtrunA17_Chr4g0055761 59.701 67 26 1 82 147 143 209 6.02e-17 79.0
Msa1435670 MtrunA17_Chr4g0023411 51.250 80 36 1 84 160 65 144 6.66e-17 77.4
Msa1435670 MtrunA17_Chr8g0334801 59.649 57 23 0 84 140 52 108 7.68e-17 77.4
Msa1435670 MtrunA17_Chr8g0367911 56.250 64 28 0 76 139 36 99 7.82e-17 79.0
Msa1435670 MtrunA17_Chr1g0150691 45.455 77 38 1 64 140 6 78 8.81e-17 77.4
Msa1435670 MtrunA17_Chr5g0401871 48.485 66 34 0 75 140 16 81 1.20e-16 76.3
Msa1435670 MtrunA17_Chr4g0062161 45.977 87 46 1 68 154 38 123 1.26e-16 76.6
Msa1435670 MtrunA17_Chr1g0153151 50.725 69 32 1 82 148 42 110 1.43e-16 75.9
Msa1435670 MtrunA17_Chr4g0066931 50.000 78 38 1 63 139 31 108 1.56e-16 78.6
Msa1435670 MtrunA17_Chr2g0282621 57.143 63 27 0 84 146 15 77 1.70e-16 75.5
Msa1435670 MtrunA17_Chr1g0150671 45.455 77 38 1 64 140 30 102 2.11e-16 77.4
Msa1435670 MtrunA17_Chr2g0301191 54.386 57 26 0 84 140 19 75 2.84e-16 75.9
Msa1435670 MtrunA17_Chr2g0286161 38.393 112 67 2 37 148 5 114 2.95e-16 77.4
Msa1435670 MtrunA17_Chr1g0150631 48.649 74 37 1 68 140 21 94 5.64e-16 75.5
Msa1435670 MtrunA17_Chr1g0150661 52.542 59 28 0 82 140 33 91 6.68e-16 75.1
Msa1435670 MtrunA17_Chr7g0265851 51.429 70 34 0 84 153 24 93 8.40e-16 74.3
Msa1435670 MtrunA17_Chr7g0257911 52.239 67 32 0 74 140 21 87 9.55e-16 75.9
Msa1435670 MtrunA17_Chr8g0378811 32.298 161 90 4 47 198 9 159 1.04e-15 75.5
Msa1435670 MtrunA17_Chr4g0055801 47.674 86 39 2 65 144 130 215 1.06e-15 75.9
Msa1435670 MtrunA17_Chr1g0170531 49.367 79 33 2 76 153 81 153 1.25e-15 74.3
Msa1435670 MtrunA17_Chr2g0301171 45.333 75 31 1 84 158 19 83 1.31e-15 73.9
Msa1435670 MtrunA17_Chr3g0136551 39.362 94 46 1 82 175 63 145 1.41e-15 75.1
Msa1435670 MtrunA17_Chr1g0184081 59.322 59 23 1 83 140 20 78 2.47e-15 71.6
Msa1435670 MtrunA17_Chr1g0186731 57.627 59 24 1 83 140 20 78 2.75e-15 71.6
Msa1435670 MtrunA17_Chr4g0055781 44.211 95 47 2 65 153 78 172 3.01e-15 73.6
Msa1435670 MtrunA17_Chr5g0412641 59.649 57 23 0 83 139 45 101 3.72e-15 74.7
Msa1435670 MtrunA17_Chr1g0196871 45.977 87 42 2 73 158 5 87 5.13e-15 69.3
Msa1435670 MtrunA17_Chr6g0461271 59.649 57 23 0 83 139 32 88 6.07e-15 73.6
Msa1435670 MtrunA17_Chr1g0203861 58.929 56 23 0 84 139 44 99 8.40e-15 71.6
Msa1435670 MtrunA17_Chr7g0252381 57.895 57 24 0 83 139 41 97 1.09e-14 72.8
Msa1435670 MtrunA17_Chr1g0189941 47.222 72 38 0 73 144 13 84 1.18e-14 70.1
Msa1435670 MtrunA17_Chr8g0335331 60.000 60 19 2 84 140 125 182 1.64e-14 70.9
Msa1435670 MtrunA17_Chr7g0261101 54.412 68 30 1 74 140 10 77 1.86e-14 69.3
Msa1435670 MtrunA17_Chr8g0350701 43.678 87 35 2 70 146 17 99 1.91e-14 72.0
Msa1435670 MtrunA17_Chr2g0283171 55.738 61 26 1 82 141 61 121 1.97e-14 69.3
Msa1435670 MtrunA17_Chr4g0046161 48.684 76 33 2 71 140 39 114 2.05e-14 68.6
Msa1435670 MtrunA17_Chr7g0243431 57.143 63 20 1 84 139 78 140 2.16e-14 73.2
Msa1435670 MtrunA17_Chr2g0301181 50.877 57 28 0 84 140 19 75 2.19e-14 70.9
Msa1435670 MtrunA17_Chr7g0261151 61.017 59 22 1 83 140 19 77 2.34e-14 68.9
Msa1435670 MtrunA17_Chr2g0283181 55.738 61 26 1 82 141 147 207 2.54e-14 71.6
Msa1435670 MtrunA17_Chr4g0026881 60.345 58 22 1 84 140 97 154 2.70e-14 70.9
Msa1435670 MtrunA17_Chr6g0473931 43.956 91 49 1 84 172 33 123 2.75e-14 70.1
Msa1435670 MtrunA17_Chr8g0335311 55.000 60 26 1 82 140 94 153 3.28e-14 69.7
Msa1435670 MtrunA17_Chr7g0250711 56.667 60 25 1 82 140 58 117 3.28e-14 70.1
Msa1435670 MtrunA17_Chr5g0396301 55.738 61 25 1 82 140 16 76 4.26e-14 68.6
Msa1435670 MtrunA17_Chr7g0250731 49.296 71 35 1 71 140 48 118 5.12e-14 69.3
Msa1435670 MtrunA17_Chr8g0335321 50.000 64 31 1 78 140 90 153 5.50e-14 69.3
Msa1435670 MtrunA17_Chr1g0184071 46.914 81 36 2 64 143 55 129 6.25e-14 68.6
Msa1435670 MtrunA17_Chr4g0042761 53.448 58 27 0 82 139 46 103 7.39e-14 70.5
Msa1435670 MtrunA17_Chr1g0186671 57.627 59 24 1 83 140 18 76 7.81e-14 67.4
Msa1435670 MtrunA17_Chr7g0250721 55.000 60 26 1 82 140 59 118 8.05e-14 68.9
Msa1435670 MtrunA17_Chr5g0438841 41.860 86 50 0 83 168 15 100 8.12e-14 68.2
Msa1435670 MtrunA17_Chr6g0473981 47.297 74 36 1 69 139 36 109 9.34e-14 69.3
Msa1435670 MtrunA17_Chr2g0297331 52.381 63 29 1 79 140 9 71 1.20e-13 66.6
Msa1435670 MtrunA17_Chr3g0136541 38.889 90 44 1 86 175 42 120 1.26e-13 68.9
Msa1435670 MtrunA17_Chr1g0184031 42.857 98 48 3 78 174 78 168 1.48e-13 68.6
Msa1435670 MtrunA17_Chr1g0184011 42.000 100 50 3 76 174 76 168 1.99e-13 68.2
Msa1435670 MtrunA17_Chr6g0486711 54.795 73 33 0 84 156 49 121 1.99e-13 68.2
Msa1435670 MtrunA17_Chr1g0184061 44.681 94 44 3 82 174 75 161 2.05e-13 68.2
Msa1435670 MtrunA17_Chr6g0473961 45.946 74 37 1 69 139 36 109 2.42e-13 67.8
Msa1435670 MtrunA17_Chr1g0200931 50.000 62 30 1 79 139 18 79 2.63e-13 65.9
Msa1435670 MtrunA17_Chr6g0473941 54.237 59 27 0 84 142 33 91 2.97e-13 67.4
Msa1435670 MtrunA17_Chr1g0146191 64.912 57 20 0 84 140 47 103 3.29e-13 68.2
Msa1435670 MtrunA17_Chr6g0473741 39.130 92 54 1 84 173 66 157 3.45e-13 67.4
Msa1435670 MtrunA17_Chr1g0183981 52.381 63 29 1 82 143 73 135 4.00e-13 67.0
Msa1435670 MtrunA17_Chr4g0057241 46.479 71 37 1 84 154 15 84 4.27e-13 66.2
Msa1435670 MtrunA17_Chr6g0473861 55.357 56 25 0 84 139 63 118 5.91e-13 67.8
Msa1435670 MtrunA17_Chr6g0473971 53.571 56 26 0 84 139 54 109 6.39e-13 67.0
Msa1435670 MtrunA17_Chr5g0396191 59.016 61 25 0 84 144 11 71 6.72e-13 65.9
Msa1435670 MtrunA17_Chr6g0473881 53.571 56 26 0 84 139 110 165 9.37e-13 67.4
Msa1435670 MtrunA17_Chr4g0026931 52.857 70 30 2 84 150 131 200 1.10e-12 66.6
Msa1435670 MtrunA17_Chr3g0129421 60.563 71 25 1 73 140 156 226 1.16e-12 67.4
Msa1435670 MtrunA17_Chr6g0474001 53.571 56 26 0 84 139 54 109 1.19e-12 66.6
Msa1435670 MtrunA17_Chr7g0225131 42.857 77 37 2 64 140 13 82 1.41e-12 62.8
Msa1435670 MtrunA17_Chr6g0473781 39.560 91 53 1 84 172 57 147 1.54e-12 65.9
Msa1435670 MtrunA17_Chr5g0424051 38.125 160 66 6 9 141 1 154 2.25e-12 66.2
Msa1435670 MtrunA17_Chr1g0186681 55.000 60 25 1 83 140 18 77 3.20e-12 62.8
Msa1435670 MtrunA17_Chr1g0205961 46.667 60 30 1 79 136 110 169 5.90e-12 65.5
Msa1435670 MtrunA17_Chr3g0131601 58.571 70 27 1 71 140 65 132 1.56e-11 63.2
Msa1435670 MtrunA17_Chr3g0114761 50.649 77 36 1 68 142 9 85 2.10e-11 62.4
Msa1435670 MtrunA17_Chr3g0142081 46.429 84 41 1 74 153 29 112 3.16e-11 62.0
Msa1435670 MtrunA17_Chr6g0473771 38.272 81 45 1 64 139 18 98 4.02e-11 59.3
Msa1435670 MtrunA17_Chr8g0345531 36.585 82 41 1 54 124 75 156 4.09e-11 62.8
Msa1435670 MtrunA17_Chr5g0398081 48.387 62 26 1 84 139 49 110 9.37e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435670 AT5G25390.2 60.302 199 58 3 81 279 4 181 3.09e-75 228
Msa1435670 AT5G25390.1 58.291 199 59 4 81 279 4 178 6.94e-71 217
Msa1435670 AT1G15360.1 59.091 198 80 1 80 277 3 199 8.39e-70 214
Msa1435670 AT1G15360.2 59.091 198 80 1 80 277 3 199 8.39e-70 214
Msa1435670 AT5G11190.1 58.081 198 70 3 81 277 4 189 1.19e-66 206
Msa1435670 AT5G25190.1 39.500 200 88 5 77 276 1 167 1.06e-28 108
Msa1435670 AT1G36060.1 41.880 117 64 2 38 153 99 212 1.19e-22 95.5
Msa1435670 AT5G53290.1 57.895 76 29 1 69 141 107 182 1.44e-20 90.5
Msa1435670 AT2G35700.1 62.500 64 24 0 77 140 38 101 1.47e-20 87.4
Msa1435670 AT4G13620.1 54.023 87 34 2 65 145 207 293 5.59e-20 89.4
Msa1435670 AT4G16750.1 61.905 63 24 0 78 140 34 96 7.34e-20 85.1
Msa1435670 AT2G22200.1 58.333 72 26 1 73 140 56 127 8.41e-20 87.0
Msa1435670 AT4G39780.1 43.200 125 55 4 63 185 70 180 1.52e-19 86.3
Msa1435670 AT1G03800.1 54.054 74 32 1 83 156 52 123 1.66e-19 85.9
Msa1435670 AT4G27950.1 61.905 63 24 0 79 141 113 175 1.72e-19 87.4
Msa1435670 AT5G65130.1 60.606 66 26 0 81 146 108 173 2.19e-19 85.9
Msa1435670 AT5G65130.2 60.606 66 26 0 81 146 110 175 2.26e-19 85.9
Msa1435670 AT2G47520.1 57.746 71 28 1 84 154 50 118 2.41e-19 83.6
Msa1435670 AT1G78080.1 51.282 78 38 0 75 152 143 220 2.61e-19 86.7
Msa1435670 AT4G06746.1 43.529 85 42 1 68 152 20 98 2.73e-19 82.8
Msa1435670 AT2G23340.1 46.067 89 42 1 75 163 19 101 3.05e-19 83.6
Msa1435670 AT4G28140.1 63.333 60 22 0 81 140 140 199 3.75e-19 85.5
Msa1435670 AT4G23750.2 58.209 67 28 0 82 148 120 186 5.70e-19 85.9
Msa1435670 AT4G23750.1 58.209 67 28 0 82 148 120 186 5.70e-19 85.9
Msa1435670 AT5G61890.1 62.712 59 22 0 82 140 88 146 6.52e-19 84.3
Msa1435670 AT1G28370.1 62.069 58 22 0 83 140 19 76 7.00e-19 82.0
Msa1435670 AT4G11140.1 62.712 59 22 0 82 140 85 143 9.60e-19 84.3
Msa1435670 AT5G13330.1 57.143 70 23 1 71 140 33 95 1.20e-18 82.8
Msa1435670 AT3G16280.1 51.948 77 37 0 80 156 57 133 1.20e-18 83.2
Msa1435670 AT1G21910.1 59.016 61 25 0 84 144 50 110 1.32e-18 83.2
Msa1435670 AT5G47220.1 50.562 89 39 2 64 147 93 181 1.55e-18 83.2
Msa1435670 AT1G71450.1 52.564 78 30 1 84 161 24 94 1.55e-18 81.6
Msa1435670 AT1G28370.2 62.069 58 22 0 83 140 57 114 1.62e-18 82.0
Msa1435670 AT3G16280.2 53.425 73 34 0 84 156 79 151 1.65e-18 83.2
Msa1435670 AT5G44210.1 65.517 58 20 0 84 141 33 90 1.67e-18 82.0
Msa1435670 AT1G22190.1 52.778 72 34 0 76 147 75 146 2.16e-18 83.2
Msa1435670 AT1G50640.1 62.712 59 22 0 83 141 27 85 2.38e-18 82.0
Msa1435670 AT2G46310.1 55.385 65 29 0 75 139 90 154 2.39e-18 83.6
Msa1435670 AT3G11020.1 64.407 59 21 0 84 142 78 136 3.33e-18 83.6
Msa1435670 AT2G20880.1 60.000 60 24 0 81 140 184 243 3.83e-18 83.6
Msa1435670 AT4G31060.1 46.154 78 42 0 67 144 10 87 4.85e-18 80.5
Msa1435670 AT3G15210.1 62.712 59 22 0 83 141 24 82 5.02e-18 81.3
Msa1435670 AT3G20310.1 56.716 67 28 1 75 141 19 84 6.47e-18 81.3
Msa1435670 AT4G32800.1 63.158 57 21 0 84 140 19 75 6.54e-18 80.9
Msa1435670 AT2G44940.1 55.882 68 30 0 73 140 89 156 7.21e-18 82.0
Msa1435670 AT2G33710.1 61.017 59 23 0 82 140 68 126 7.50e-18 80.5
Msa1435670 AT2G33710.2 61.017 59 23 0 82 140 68 126 8.75e-18 80.9
Msa1435670 AT2G25820.1 63.158 57 21 0 84 140 26 82 9.34e-18 80.5
Msa1435670 AT4G36900.1 51.613 62 30 0 79 140 25 86 9.75e-18 79.7
Msa1435670 AT3G60490.1 54.930 71 29 1 73 140 57 127 1.09e-17 80.9
Msa1435670 AT1G22985.1 59.701 67 24 1 76 139 67 133 1.48e-17 78.6
Msa1435670 AT5G43410.1 58.824 68 27 1 83 149 14 81 1.75e-17 77.4
Msa1435670 AT1G46768.3 52.308 65 31 0 76 140 23 87 2.51e-17 77.4
Msa1435670 AT1G72360.1 54.839 62 28 0 79 140 20 81 2.92e-17 79.0
Msa1435670 AT1G46768.1 52.308 65 31 0 76 140 23 87 3.11e-17 77.4
Msa1435670 AT1G46768.2 52.308 65 31 0 76 140 23 87 3.11e-17 77.4
Msa1435670 AT1G19210.1 49.254 67 34 0 74 140 2 68 3.33e-17 78.2
Msa1435670 AT1G72360.3 54.839 62 28 0 79 140 69 130 4.17e-17 79.3
Msa1435670 AT1G72360.2 54.839 62 28 0 79 140 71 132 4.37e-17 79.3
Msa1435670 AT5G11590.1 61.404 57 22 0 84 140 51 107 4.41e-17 79.0
Msa1435670 AT5G25810.1 61.404 57 22 0 84 140 36 92 4.73e-17 78.6
Msa1435670 AT3G50260.1 49.206 63 32 0 78 140 15 77 4.99e-17 76.6
Msa1435670 AT4G17500.1 59.701 67 26 1 82 147 146 212 5.06e-17 79.3
Msa1435670 AT1G74930.1 46.575 73 38 1 68 140 6 77 6.39e-17 77.8
Msa1435670 AT5G19790.1 59.091 66 23 1 74 139 16 77 1.05e-16 78.2
Msa1435670 AT5G05410.2 62.712 59 22 0 84 142 79 137 1.14e-16 79.0
Msa1435670 AT3G61630.1 62.069 58 22 0 82 139 103 160 1.34e-16 79.0
Msa1435670 AT5G05410.1 62.712 59 22 0 84 142 79 137 1.39e-16 79.0
Msa1435670 AT1G01250.1 56.140 57 25 0 84 140 45 101 1.69e-16 76.3
Msa1435670 AT5G67190.1 48.387 62 32 0 79 140 16 77 1.82e-16 76.3
Msa1435670 AT4G25490.1 61.017 59 23 0 84 142 48 106 1.84e-16 76.6
Msa1435670 AT2G40340.2 48.649 74 38 0 84 157 14 87 1.90e-16 78.2
Msa1435670 AT2G40340.5 48.649 74 38 0 84 157 14 87 1.90e-16 78.2
Msa1435670 AT2G40340.4 48.649 74 38 0 84 157 14 87 1.90e-16 78.2
Msa1435670 AT1G28360.1 61.404 57 22 0 84 140 12 68 2.39e-16 75.9
Msa1435670 AT5G13910.1 51.389 72 35 0 68 139 4 75 2.69e-16 76.3
Msa1435670 AT2G40340.6 30.288 208 106 4 84 277 79 261 3.18e-16 78.2
Msa1435670 AT1G24590.1 61.017 59 23 0 81 139 55 113 3.31e-16 77.8
Msa1435670 AT4G25470.1 61.017 59 23 0 84 142 51 109 3.86e-16 75.9
Msa1435670 AT2G40340.3 48.649 74 38 0 84 157 72 145 3.96e-16 77.4
Msa1435670 AT3G57600.1 52.239 67 32 0 74 140 18 84 4.25e-16 77.0
Msa1435670 AT5G21960.1 49.206 63 32 0 78 140 1 63 4.48e-16 75.9
Msa1435670 AT2G40340.1 48.649 74 38 0 84 157 72 145 4.52e-16 77.8
Msa1435670 AT5G18560.1 40.566 106 48 3 73 168 42 142 4.71e-16 77.8
Msa1435670 AT1G28160.1 45.263 95 39 2 83 177 38 119 6.12e-16 75.9
Msa1435670 AT1G12980.1 57.627 59 25 0 81 139 54 112 8.09e-16 76.6
Msa1435670 AT3G16770.1 59.649 57 23 0 84 140 79 135 1.04e-15 75.5
Msa1435670 AT1G12890.1 52.174 69 33 0 80 148 17 85 2.21e-15 73.9
Msa1435670 AT4G25480.1 57.627 59 25 0 84 142 51 109 2.44e-15 73.6
Msa1435670 AT3G23230.1 59.322 59 23 1 83 140 19 77 2.73e-15 71.6
Msa1435670 AT5G47230.1 50.000 76 35 2 69 141 139 214 4.45e-15 74.3
Msa1435670 AT3G23240.1 42.149 121 59 4 82 198 80 193 4.87e-15 72.8
Msa1435670 AT5G18450.1 54.545 66 30 0 74 139 24 89 7.35e-15 73.9
Msa1435670 AT2G31230.1 40.404 99 58 1 44 141 46 144 8.73e-15 72.8
Msa1435670 AT5G51990.1 58.929 56 23 0 84 139 54 109 9.38e-15 72.4
Msa1435670 AT5G51190.1 45.679 81 41 2 72 149 58 138 9.40e-15 72.0
Msa1435670 AT1G63030.2 35.965 114 66 3 64 170 5 118 1.68e-14 70.5
Msa1435670 AT1G63030.1 35.965 114 66 3 64 170 5 118 1.68e-14 70.5
Msa1435670 AT4G17490.1 46.053 76 40 1 78 152 131 206 1.79e-14 72.4
Msa1435670 AT2G44840.1 53.968 63 28 1 79 140 87 149 2.29e-14 71.2
Msa1435670 AT1G75490.1 49.275 69 35 0 74 142 32 100 3.20e-14 70.5
Msa1435670 AT5G61600.1 30.409 171 113 2 1 170 10 175 4.81e-14 70.5
Msa1435670 AT5G07580.1 45.570 79 37 2 81 158 107 180 4.84e-14 70.1
Msa1435670 AT2G40350.2 51.724 58 28 0 84 141 74 131 5.71e-14 68.9
Msa1435670 AT2G40350.1 51.724 58 28 0 84 141 67 124 5.74e-14 68.6
Msa1435670 AT1G71130.1 57.143 63 22 1 82 139 77 139 6.06e-14 68.6
Msa1435670 AT2G36450.1 56.667 60 25 1 84 142 15 74 7.44e-14 68.9
Msa1435670 AT5G64750.1 60.000 50 20 0 91 140 192 241 1.47e-13 70.5
Msa1435670 AT4G18450.1 48.684 76 37 2 68 141 94 169 1.95e-13 69.7
Msa1435670 AT1G68550.1 42.857 77 40 1 82 154 111 187 3.06e-13 69.3
Msa1435670 AT1G68550.2 42.857 77 40 1 82 154 111 187 3.06e-13 69.3
Msa1435670 AT5G07310.1 64.407 59 21 0 82 140 90 148 4.00e-13 68.2
Msa1435670 AT1G12610.1 50.000 56 28 0 84 139 30 85 4.17e-13 67.4
Msa1435670 AT2G38340.1 47.619 84 36 1 83 158 69 152 4.32e-13 67.8
Msa1435670 AT1G43160.1 65.079 63 22 0 78 140 55 117 5.81e-13 66.6
Msa1435670 AT1G77200.1 51.948 77 37 0 78 154 37 113 7.03e-13 67.4
Msa1435670 AT1G71520.1 48.387 62 28 1 83 140 13 74 1.39e-12 64.3
Msa1435670 AT3G25890.1 53.704 54 25 0 70 123 117 170 1.46e-12 67.4
Msa1435670 AT3G25890.2 53.704 54 25 0 70 123 117 170 1.46e-12 67.4
Msa1435670 AT1G22810.1 45.312 64 33 1 79 140 9 72 1.48e-12 64.3
Msa1435670 AT4G34410.1 66.667 57 19 0 84 140 136 192 1.55e-11 63.9
Msa1435670 AT3G14230.1 45.161 93 51 0 52 144 96 188 1.80e-11 64.3
Msa1435670 AT5G50080.1 61.290 62 24 0 79 140 72 133 1.80e-11 62.8
Msa1435670 AT5G50080.2 61.290 62 24 0 79 140 81 142 1.89e-11 63.2
Msa1435670 AT1G77640.1 59.016 61 25 0 80 140 39 99 2.55e-11 62.8
Msa1435670 AT1G64380.1 44.144 111 50 2 75 185 127 225 2.60e-11 63.5
Msa1435670 AT3G14230.3 52.703 74 35 0 71 144 110 183 4.23e-11 63.2
Msa1435670 AT5G67180.2 44.872 78 42 1 81 157 186 263 4.26e-11 62.8
Msa1435670 AT3G14230.2 52.703 74 35 0 71 144 111 184 4.41e-11 63.2
Msa1435670 AT1G53910.1 45.679 81 44 0 60 140 101 181 5.72e-11 62.8
Msa1435670 AT1G53910.2 45.679 81 44 0 60 140 101 181 5.72e-11 62.8
Msa1435670 AT1G53910.3 45.679 81 44 0 60 140 99 179 5.73e-11 62.8
Msa1435670 AT5G67000.1 47.541 61 32 0 78 138 115 175 6.42e-11 60.8
Msa1435670 AT1G44830.1 63.333 60 21 1 82 140 33 92 8.64e-11 60.8

Find 88 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCTAAATTTATTTATAT+TGG 0.148646 tig0027765:-38315 None:intergenic
GACCACATTCTGATTCTAAT+TGG 0.168182 tig0027765:+38977 Msa1435670:CDS
CTACCACTACCACCATTATA+AGG 0.252274 tig0027765:-38805 None:intergenic
GGTTGGGAAACATGAGAATT+AGG 0.285190 tig0027765:+39413 Msa1435670:three_prime_UTR
TTGCTAAATTTATTTATATT+GGG 0.294546 tig0027765:-38314 None:intergenic
ACTATTGATGGTGGTAATAA+TGG 0.301168 tig0027765:+39069 Msa1435670:CDS
CTCCATCACTTACTTGTTTG+AGG 0.311570 tig0027765:+38908 Msa1435670:CDS
TGATTGAAGAGTTACTTAAT+TGG 0.312912 tig0027765:+39151 Msa1435670:CDS
CTCATCAGCAGGAAGAAAAT+AGG 0.314486 tig0027765:+39209 Msa1435670:three_prime_UTR
CATATTTCCTTTCCTTGGTT+GGG 0.318833 tig0027765:-38426 None:intergenic
GGCAGCGCCAGTGGGGCTCT+TGG 0.319895 tig0027765:+38480 Msa1435670:CDS
CCATATTTCCTTTCCTTGGT+TGG 0.341324 tig0027765:-38427 None:intergenic
CCAACCAAGGAAAGGAAATA+TGG 0.351898 tig0027765:+38427 Msa1435670:CDS
TGTACCATATTTCCTTTCCT+TGG 0.363966 tig0027765:-38431 None:intergenic
GCAGCGCCAGTGGGGCTCTT+GGG 0.372367 tig0027765:+38481 Msa1435670:CDS
TACCACTACCACCATTATAA+GGG 0.385987 tig0027765:-38804 None:intergenic
GTAATGCTGATAATGAAAAT+AGG 0.388971 tig0027765:+39091 Msa1435670:CDS
TTAGGATCAAATTAAGAAGA+AGG 0.406469 tig0027765:+39431 Msa1435670:three_prime_UTR
AAATTAAGAAGAAGGATTGT+TGG 0.411897 tig0027765:+39439 Msa1435670:three_prime_UTR
GCTAGTGACACCCCTTATAA+TGG 0.412119 tig0027765:+38793 Msa1435670:CDS
AGTAGCTCAGAGAGTGCCTT+GGG 0.417732 tig0027765:-38850 None:intergenic
ATTTATTTATATTGGGTTGT+CGG 0.422132 tig0027765:-38307 None:intergenic
GTTAATTAATAAGTTAGCTA+TGG 0.435206 tig0027765:+38199 Msa1435670:exon
ACTATAGAGTCAGAAGAGAT+AGG 0.438321 tig0027765:+39033 Msa1435670:CDS
ACCACATTCTGATTCTAATT+GGG 0.444505 tig0027765:+38978 Msa1435670:CDS
TCAAAACAACACACTATTGA+TGG 0.448013 tig0027765:+39057 Msa1435670:CDS
TGAAATAAATGAGGTGTAGC+AGG 0.450961 tig0027765:-38173 None:intergenic
GAGGAGTCAGGCAGCGCCAG+TGG 0.460267 tig0027765:+38471 Msa1435670:CDS
TCACCTTGATTCTTTGACAC+AGG 0.481740 tig0027765:-38763 None:intergenic
TGATTCTTTCTTGCCTCCCA+AGG 0.483717 tig0027765:+38834 Msa1435670:CDS
TTTCCTGTGTCAAAGAATCA+AGG 0.490960 tig0027765:+38760 Msa1435670:CDS
GTATGCAATATATTGTGGTT+GGG 0.496364 tig0027765:+39397 Msa1435670:three_prime_UTR
CAAAGAAGTTCAGAGGAGTC+AGG 0.498039 tig0027765:+38459 Msa1435670:CDS
AGTAATTAACTCTCATCAGC+AGG 0.500299 tig0027765:+39198 Msa1435670:exon
TAAATGAGGTGTAGCAGGTA+GGG 0.500572 tig0027765:-38168 None:intergenic
AGAAAGAGAAGGGTGTGGTT+AGG 0.501728 tig0027765:+38655 Msa1435670:intron
AGGAGTCAGGCAGCGCCAGT+GGG 0.506725 tig0027765:+38472 Msa1435670:CDS
CTGATTCTAATTGGGTCATG+AGG 0.507349 tig0027765:+38986 Msa1435670:CDS
AGTATGCAATATATTGTGGT+TGG 0.507407 tig0027765:+39396 Msa1435670:three_prime_UTR
AATAGGAATATTTCATGTCA+TGG 0.508893 tig0027765:+39226 Msa1435670:three_prime_UTR
CTGACACCCAAGAGCCCCAC+TGG 0.511591 tig0027765:-38487 None:intergenic
TAGGTTGGTAGTAGAAGAAG+AGG 0.515176 tig0027765:+39110 Msa1435670:CDS
ACCCCTTATAATGGTGGTAG+TGG 0.519879 tig0027765:+38802 Msa1435670:CDS
ATTAATGTTGCAGAAAGAGA+AGG 0.522866 tig0027765:+38644 Msa1435670:intron
TGCTGATAATGAAAATAGGT+TGG 0.525975 tig0027765:+39095 Msa1435670:CDS
AATGAGGGAATTACAACAAA+GGG 0.528956 tig0027765:-38520 None:intergenic
TTAATGTTGCAGAAAGAGAA+GGG 0.538276 tig0027765:+38645 Msa1435670:intron
ATAGCAGAAAATGGCATGCA+TGG 0.545331 tig0027765:-39275 None:intergenic
TGGGTCATGAGGGTTGAACT+TGG 0.546099 tig0027765:+38997 Msa1435670:CDS
GAGTAGCTCAGAGAGTGCCT+TGG 0.546798 tig0027765:-38851 None:intergenic
TATGAGCATAGGACGAAAAG+TGG 0.547238 tig0027765:-38276 None:intergenic
TTTATATTGGGTTGTCGGTG+TGG 0.549088 tig0027765:-38302 None:intergenic
TATAATGGTGGTAGTGGTAG+TGG 0.550731 tig0027765:+38808 Msa1435670:CDS
GTCATGAGGGTTGAACTTGG+TGG 0.552880 tig0027765:+39000 Msa1435670:CDS
TCTAGGCTTGACTATAGAGT+TGG 0.553027 tig0027765:-38080 None:intergenic
ATTAATTCCCAACCAAGGAA+AGG 0.553724 tig0027765:+38419 Msa1435670:CDS
AAAGTTGTGATCCACTCTCT+AGG 0.556450 tig0027765:-38097 None:intergenic
TGATTCTAATTGGGTCATGA+GGG 0.557657 tig0027765:+38987 Msa1435670:CDS
AGCCTCAAACAAGTAAGTGA+TGG 0.562083 tig0027765:-38910 None:intergenic
ATAAATGAGGTGTAGCAGGT+AGG 0.564369 tig0027765:-38169 None:intergenic
TAATAAAGCTTATATTTCTG+AGG 0.565553 tig0027765:-38400 None:intergenic
GATAATGATAATTCTCACAT+TGG 0.568198 tig0027765:+38934 Msa1435670:CDS
ATACAGTATGCAATATATTG+TGG 0.570765 tig0027765:+39392 Msa1435670:three_prime_UTR
ATTAACTACTGAAATAAATG+AGG 0.577618 tig0027765:-38182 None:intergenic
AACAAGTAAGTGATGGAGAA+GGG 0.581544 tig0027765:-38903 None:intergenic
TCATGAGGGTTGAACTTGGT+GGG 0.586410 tig0027765:+39001 Msa1435670:CDS
AAACAAGTAAGTGATGGAGA+AGG 0.587309 tig0027765:-38904 None:intergenic
CGGTGTGGAAATATGAGCAT+AGG 0.587987 tig0027765:-38287 None:intergenic
TGTATGTTGATGTGAGTAAG+TGG 0.602784 tig0027765:-38342 None:intergenic
GTTGCAGAAAGAGAAGGGTG+TGG 0.608205 tig0027765:+38650 Msa1435670:intron
GCTTTATTAATTCCCAACCA+AGG 0.608474 tig0027765:+38414 Msa1435670:CDS
CAACAAACAAAGAAGTTCAG+AGG 0.612284 tig0027765:+38452 Msa1435670:CDS
TTACTTGAAGTTGATCCACA+TGG 0.613395 tig0027765:-39180 None:intergenic
AATATTTCATGTCATGGACA+TGG 0.619424 tig0027765:+39232 Msa1435670:three_prime_UTR
ATGAGCATAGGACGAAAAGT+GGG 0.631292 tig0027765:-38275 None:intergenic
AGGAACATTTGAGACAGCAG+AGG 0.634183 tig0027765:+38675 Msa1435670:CDS
ACCACTACCACCATTATAAG+GGG 0.634975 tig0027765:-38803 None:intergenic
AAATGAGGGAATTACAACAA+AGG 0.637685 tig0027765:-38521 None:intergenic
AAACAACACACTATTGATGG+TGG 0.638087 tig0027765:+39060 Msa1435670:CDS
CTATAGTCAAGCCTAGAGAG+TGG 0.639461 tig0027765:+38086 Msa1435670:five_prime_UTR
GTATTAAGTAACTATCAAAG+TGG 0.643311 tig0027765:-39373 None:intergenic
AGCTCAGAGAGTGCCTTGGG+AGG 0.645004 tig0027765:-38847 None:intergenic
GGAGTCAGGCAGCGCCAGTG+GGG 0.645187 tig0027765:+38473 Msa1435670:CDS
ATAATTCTCACATTGGAGTG+TGG 0.651598 tig0027765:+38941 Msa1435670:CDS
GAGGGAATTACAACAAAGGG+TGG 0.653367 tig0027765:-38517 None:intergenic
CTTAATTGGAACTATCCATG+TGG 0.667569 tig0027765:+39165 Msa1435670:CDS
AGTGACACCCCTTATAATGG+TGG 0.678747 tig0027765:+38796 Msa1435670:CDS
ACCCAATTAGAATCAGAATG+TGG 0.683688 tig0027765:-38979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGCTAAATTTATTTATATT+GGG - tig0027765:38317-38336 None:intergenic 10.0%
!! ATTGCTAAATTTATTTATAT+TGG - tig0027765:38318-38337 None:intergenic 10.0%
!! TTGCTAAATTTATTTATATT+GGG - tig0027765:38317-38336 None:intergenic 10.0%
!! ATTGCTAAATTTATTTATAT+TGG - tig0027765:38318-38337 None:intergenic 10.0%
!! CATAATATAATATAAGATGT+AGG - tig0027765:38578-38597 None:intergenic 15.0%
!! ATAAAGCAATTTATTAATTC+CGG + tig0027765:39481-39500 Msa1435670:three_prime_UTR 15.0%
!! CATAATATAATATAAGATGT+AGG - tig0027765:38578-38597 None:intergenic 15.0%
!! ATTAACTACTGAAATAAATG+AGG - tig0027765:38185-38204 None:intergenic 20.0%
!! GTTAATTAATAAGTTAGCTA+TGG + tig0027765:38199-38218 Msa1435670:exon 20.0%
!!! ATTTATTTATATTGGGTTGT+CGG - tig0027765:38310-38329 None:intergenic 20.0%
!!! TAATAAAGCTTATATTTCTG+AGG - tig0027765:38403-38422 None:intergenic 20.0%
!! ATTGATATAGAGTTAAATGA+GGG - tig0027765:38538-38557 None:intergenic 20.0%
!! ATTAACTACTGAAATAAATG+AGG - tig0027765:38185-38204 None:intergenic 20.0%
!! GTTAATTAATAAGTTAGCTA+TGG + tig0027765:38199-38218 Msa1435670:exon 20.0%
!!! ATTTATTTATATTGGGTTGT+CGG - tig0027765:38310-38329 None:intergenic 20.0%
!!! TAATAAAGCTTATATTTCTG+AGG - tig0027765:38403-38422 None:intergenic 20.0%
!! ATTGATATAGAGTTAAATGA+GGG - tig0027765:38538-38557 None:intergenic 20.0%
! CATTGATATAGAGTTAAATG+AGG - tig0027765:38539-38558 None:intergenic 25.0%
! GATAATGATAATTCTCACAT+TGG + tig0027765:38934-38953 Msa1435670:CDS 25.0%
!! GTAATGCTGATAATGAAAAT+AGG + tig0027765:39091-39110 Msa1435670:CDS 25.0%
! TGATTGAAGAGTTACTTAAT+TGG + tig0027765:39151-39170 Msa1435670:CDS 25.0%
! AATAGGAATATTTCATGTCA+TGG + tig0027765:39226-39245 Msa1435670:three_prime_UTR 25.0%
! ATGAAAAAGATAGCAGAAAA+TGG - tig0027765:39287-39306 None:intergenic 25.0%
! GTATTAAGTAACTATCAAAG+TGG - tig0027765:39376-39395 None:intergenic 25.0%
! ATACAGTATGCAATATATTG+TGG + tig0027765:39392-39411 Msa1435670:three_prime_UTR 25.0%
! TTAGGATCAAATTAAGAAGA+AGG + tig0027765:39431-39450 Msa1435670:three_prime_UTR 25.0%
! AAATTAAGAAGAAGGATTGT+TGG + tig0027765:39439-39458 Msa1435670:three_prime_UTR 25.0%
! CATTGATATAGAGTTAAATG+AGG - tig0027765:38539-38558 None:intergenic 25.0%
! GATAATGATAATTCTCACAT+TGG + tig0027765:38934-38953 Msa1435670:CDS 25.0%
!! GTAATGCTGATAATGAAAAT+AGG + tig0027765:39091-39110 Msa1435670:CDS 25.0%
! TGATTGAAGAGTTACTTAAT+TGG + tig0027765:39151-39170 Msa1435670:CDS 25.0%
! AATAGGAATATTTCATGTCA+TGG + tig0027765:39226-39245 Msa1435670:three_prime_UTR 25.0%
! ATGAAAAAGATAGCAGAAAA+TGG - tig0027765:39287-39306 None:intergenic 25.0%
! GTATTAAGTAACTATCAAAG+TGG - tig0027765:39376-39395 None:intergenic 25.0%
! ATACAGTATGCAATATATTG+TGG + tig0027765:39392-39411 Msa1435670:three_prime_UTR 25.0%
! TTAGGATCAAATTAAGAAGA+AGG + tig0027765:39431-39450 Msa1435670:three_prime_UTR 25.0%
! AAATTAAGAAGAAGGATTGT+TGG + tig0027765:39439-39458 Msa1435670:three_prime_UTR 25.0%
AATGAGGGAATTACAACAAA+GGG - tig0027765:38523-38542 None:intergenic 30.0%
AAATGAGGGAATTACAACAA+AGG - tig0027765:38524-38543 None:intergenic 30.0%
ATTAATGTTGCAGAAAGAGA+AGG + tig0027765:38644-38663 Msa1435670:intron 30.0%
TTAATGTTGCAGAAAGAGAA+GGG + tig0027765:38645-38664 Msa1435670:intron 30.0%
ACCACATTCTGATTCTAATT+GGG + tig0027765:38978-38997 Msa1435670:CDS 30.0%
TCAAAACAACACACTATTGA+TGG + tig0027765:39057-39076 Msa1435670:CDS 30.0%
!! ACTATTGATGGTGGTAATAA+TGG + tig0027765:39069-39088 Msa1435670:CDS 30.0%
! TGCTGATAATGAAAATAGGT+TGG + tig0027765:39095-39114 Msa1435670:CDS 30.0%
AATATTTCATGTCATGGACA+TGG + tig0027765:39232-39251 Msa1435670:three_prime_UTR 30.0%
AGTATGCAATATATTGTGGT+TGG + tig0027765:39396-39415 Msa1435670:three_prime_UTR 30.0%
GTATGCAATATATTGTGGTT+GGG + tig0027765:39397-39416 Msa1435670:three_prime_UTR 30.0%
AATGAGGGAATTACAACAAA+GGG - tig0027765:38523-38542 None:intergenic 30.0%
AAATGAGGGAATTACAACAA+AGG - tig0027765:38524-38543 None:intergenic 30.0%
ATTAATGTTGCAGAAAGAGA+AGG + tig0027765:38644-38663 Msa1435670:intron 30.0%
TTAATGTTGCAGAAAGAGAA+GGG + tig0027765:38645-38664 Msa1435670:intron 30.0%
ACCACATTCTGATTCTAATT+GGG + tig0027765:38978-38997 Msa1435670:CDS 30.0%
TCAAAACAACACACTATTGA+TGG + tig0027765:39057-39076 Msa1435670:CDS 30.0%
!! ACTATTGATGGTGGTAATAA+TGG + tig0027765:39069-39088 Msa1435670:CDS 30.0%
! TGCTGATAATGAAAATAGGT+TGG + tig0027765:39095-39114 Msa1435670:CDS 30.0%
AATATTTCATGTCATGGACA+TGG + tig0027765:39232-39251 Msa1435670:three_prime_UTR 30.0%
AGTATGCAATATATTGTGGT+TGG + tig0027765:39396-39415 Msa1435670:three_prime_UTR 30.0%
GTATGCAATATATTGTGGTT+GGG + tig0027765:39397-39416 Msa1435670:three_prime_UTR 30.0%
TGAAATAAATGAGGTGTAGC+AGG - tig0027765:38176-38195 None:intergenic 35.0%
! GGATTTTATCAAACTTGTGC+TGG + tig0027765:38220-38239 Msa1435670:CDS 35.0%
TGTATGTTGATGTGAGTAAG+TGG - tig0027765:38345-38364 None:intergenic 35.0%
! GCTTTATTAATTCCCAACCA+AGG + tig0027765:38414-38433 Msa1435670:CDS 35.0%
ATTAATTCCCAACCAAGGAA+AGG + tig0027765:38419-38438 Msa1435670:CDS 35.0%
CATATTTCCTTTCCTTGGTT+GGG - tig0027765:38429-38448 None:intergenic 35.0%
TGTACCATATTTCCTTTCCT+TGG - tig0027765:38434-38453 None:intergenic 35.0%
CAACAAACAAAGAAGTTCAG+AGG + tig0027765:38452-38471 Msa1435670:CDS 35.0%
!! CAAGCTGCAATTTTGATGAA+TGG + tig0027765:38718-38737 Msa1435670:CDS 35.0%
TTTCCTGTGTCAAAGAATCA+AGG + tig0027765:38760-38779 Msa1435670:CDS 35.0%
TACCACTACCACCATTATAA+GGG - tig0027765:38807-38826 None:intergenic 35.0%
! AACAAGTAAGTGATGGAGAA+GGG - tig0027765:38906-38925 None:intergenic 35.0%
! AAACAAGTAAGTGATGGAGA+AGG - tig0027765:38907-38926 None:intergenic 35.0%
ATAATTCTCACATTGGAGTG+TGG + tig0027765:38941-38960 Msa1435670:CDS 35.0%
GACCACATTCTGATTCTAAT+TGG + tig0027765:38977-38996 Msa1435670:CDS 35.0%
ACCCAATTAGAATCAGAATG+TGG - tig0027765:38982-39001 None:intergenic 35.0%
TGATTCTAATTGGGTCATGA+GGG + tig0027765:38987-39006 Msa1435670:CDS 35.0%
ACTATAGAGTCAGAAGAGAT+AGG + tig0027765:39033-39052 Msa1435670:CDS 35.0%
AAACAACACACTATTGATGG+TGG + tig0027765:39060-39079 Msa1435670:CDS 35.0%
CTTAATTGGAACTATCCATG+TGG + tig0027765:39165-39184 Msa1435670:CDS 35.0%
! TTACTTGAAGTTGATCCACA+TGG - tig0027765:39183-39202 None:intergenic 35.0%
AGTAATTAACTCTCATCAGC+AGG + tig0027765:39198-39217 Msa1435670:exon 35.0%
TGAAATAAATGAGGTGTAGC+AGG - tig0027765:38176-38195 None:intergenic 35.0%
! GGATTTTATCAAACTTGTGC+TGG + tig0027765:38220-38239 Msa1435670:CDS 35.0%
TGTATGTTGATGTGAGTAAG+TGG - tig0027765:38345-38364 None:intergenic 35.0%
! GCTTTATTAATTCCCAACCA+AGG + tig0027765:38414-38433 Msa1435670:CDS 35.0%
ATTAATTCCCAACCAAGGAA+AGG + tig0027765:38419-38438 Msa1435670:CDS 35.0%
CATATTTCCTTTCCTTGGTT+GGG - tig0027765:38429-38448 None:intergenic 35.0%
TGTACCATATTTCCTTTCCT+TGG - tig0027765:38434-38453 None:intergenic 35.0%
CAACAAACAAAGAAGTTCAG+AGG + tig0027765:38452-38471 Msa1435670:CDS 35.0%
!! CAAGCTGCAATTTTGATGAA+TGG + tig0027765:38718-38737 Msa1435670:CDS 35.0%
TTTCCTGTGTCAAAGAATCA+AGG + tig0027765:38760-38779 Msa1435670:CDS 35.0%
TACCACTACCACCATTATAA+GGG - tig0027765:38807-38826 None:intergenic 35.0%
! AACAAGTAAGTGATGGAGAA+GGG - tig0027765:38906-38925 None:intergenic 35.0%
! AAACAAGTAAGTGATGGAGA+AGG - tig0027765:38907-38926 None:intergenic 35.0%
ATAATTCTCACATTGGAGTG+TGG + tig0027765:38941-38960 Msa1435670:CDS 35.0%
GACCACATTCTGATTCTAAT+TGG + tig0027765:38977-38996 Msa1435670:CDS 35.0%
ACCCAATTAGAATCAGAATG+TGG - tig0027765:38982-39001 None:intergenic 35.0%
TGATTCTAATTGGGTCATGA+GGG + tig0027765:38987-39006 Msa1435670:CDS 35.0%
ACTATAGAGTCAGAAGAGAT+AGG + tig0027765:39033-39052 Msa1435670:CDS 35.0%
AAACAACACACTATTGATGG+TGG + tig0027765:39060-39079 Msa1435670:CDS 35.0%
CTTAATTGGAACTATCCATG+TGG + tig0027765:39165-39184 Msa1435670:CDS 35.0%
! TTACTTGAAGTTGATCCACA+TGG - tig0027765:39183-39202 None:intergenic 35.0%
AGTAATTAACTCTCATCAGC+AGG + tig0027765:39198-39217 Msa1435670:exon 35.0%
TCTAGGCTTGACTATAGAGT+TGG - tig0027765:38083-38102 None:intergenic 40.0%
AAAGTTGTGATCCACTCTCT+AGG - tig0027765:38100-38119 None:intergenic 40.0%
!!! GCAGGTAGGGTTATCTTTTT+TGG - tig0027765:38158-38177 None:intergenic 40.0%
TAAATGAGGTGTAGCAGGTA+GGG - tig0027765:38171-38190 None:intergenic 40.0%
ATAAATGAGGTGTAGCAGGT+AGG - tig0027765:38172-38191 None:intergenic 40.0%
ATGAGCATAGGACGAAAAGT+GGG - tig0027765:38278-38297 None:intergenic 40.0%
TATGAGCATAGGACGAAAAG+TGG - tig0027765:38279-38298 None:intergenic 40.0%
! TTTATATTGGGTTGTCGGTG+TGG - tig0027765:38305-38324 None:intergenic 40.0%
CCATATTTCCTTTCCTTGGT+TGG - tig0027765:38430-38449 None:intergenic 40.0%
CCAACCAAGGAAAGGAAATA+TGG + tig0027765:38427-38446 Msa1435670:CDS 40.0%
TAAGATGTAGGTGCATTGTG+TGG - tig0027765:38566-38585 None:intergenic 40.0%
TCACCTTGATTCTTTGACAC+AGG - tig0027765:38766-38785 None:intergenic 40.0%
ACCACTACCACCATTATAAG+GGG - tig0027765:38806-38825 None:intergenic 40.0%
CTACCACTACCACCATTATA+AGG - tig0027765:38808-38827 None:intergenic 40.0%
!! TATAATGGTGGTAGTGGTAG+TGG + tig0027765:38808-38827 Msa1435670:CDS 40.0%
CTCCATCACTTACTTGTTTG+AGG + tig0027765:38908-38927 Msa1435670:CDS 40.0%
AGCCTCAAACAAGTAAGTGA+TGG - tig0027765:38913-38932 None:intergenic 40.0%
CTGATTCTAATTGGGTCATG+AGG + tig0027765:38986-39005 Msa1435670:CDS 40.0%
!! TAGGTTGGTAGTAGAAGAAG+AGG + tig0027765:39110-39129 Msa1435670:CDS 40.0%
CTCATCAGCAGGAAGAAAAT+AGG + tig0027765:39209-39228 Msa1435670:three_prime_UTR 40.0%
ATAGCAGAAAATGGCATGCA+TGG - tig0027765:39278-39297 None:intergenic 40.0%
GGTTGGGAAACATGAGAATT+AGG + tig0027765:39413-39432 Msa1435670:three_prime_UTR 40.0%
TCTAGGCTTGACTATAGAGT+TGG - tig0027765:38083-38102 None:intergenic 40.0%
AAAGTTGTGATCCACTCTCT+AGG - tig0027765:38100-38119 None:intergenic 40.0%
!!! GCAGGTAGGGTTATCTTTTT+TGG - tig0027765:38158-38177 None:intergenic 40.0%
TAAATGAGGTGTAGCAGGTA+GGG - tig0027765:38171-38190 None:intergenic 40.0%
ATAAATGAGGTGTAGCAGGT+AGG - tig0027765:38172-38191 None:intergenic 40.0%
ATGAGCATAGGACGAAAAGT+GGG - tig0027765:38278-38297 None:intergenic 40.0%
TATGAGCATAGGACGAAAAG+TGG - tig0027765:38279-38298 None:intergenic 40.0%
! TTTATATTGGGTTGTCGGTG+TGG - tig0027765:38305-38324 None:intergenic 40.0%
CCATATTTCCTTTCCTTGGT+TGG - tig0027765:38430-38449 None:intergenic 40.0%
CCAACCAAGGAAAGGAAATA+TGG + tig0027765:38427-38446 Msa1435670:CDS 40.0%
TAAGATGTAGGTGCATTGTG+TGG - tig0027765:38566-38585 None:intergenic 40.0%
TCACCTTGATTCTTTGACAC+AGG - tig0027765:38766-38785 None:intergenic 40.0%
ACCACTACCACCATTATAAG+GGG - tig0027765:38806-38825 None:intergenic 40.0%
CTACCACTACCACCATTATA+AGG - tig0027765:38808-38827 None:intergenic 40.0%
!! TATAATGGTGGTAGTGGTAG+TGG + tig0027765:38808-38827 Msa1435670:CDS 40.0%
CTCCATCACTTACTTGTTTG+AGG + tig0027765:38908-38927 Msa1435670:CDS 40.0%
AGCCTCAAACAAGTAAGTGA+TGG - tig0027765:38913-38932 None:intergenic 40.0%
CTGATTCTAATTGGGTCATG+AGG + tig0027765:38986-39005 Msa1435670:CDS 40.0%
!! TAGGTTGGTAGTAGAAGAAG+AGG + tig0027765:39110-39129 Msa1435670:CDS 40.0%
CTCATCAGCAGGAAGAAAAT+AGG + tig0027765:39209-39228 Msa1435670:three_prime_UTR 40.0%
ATAGCAGAAAATGGCATGCA+TGG - tig0027765:39278-39297 None:intergenic 40.0%
GGTTGGGAAACATGAGAATT+AGG + tig0027765:39413-39432 Msa1435670:three_prime_UTR 40.0%
CTATAGTCAAGCCTAGAGAG+TGG + tig0027765:38086-38105 Msa1435670:five_prime_UTR 45.0%
CGGTGTGGAAATATGAGCAT+AGG - tig0027765:38290-38309 None:intergenic 45.0%
CAAAGAAGTTCAGAGGAGTC+AGG + tig0027765:38459-38478 Msa1435670:CDS 45.0%
GAGGGAATTACAACAAAGGG+TGG - tig0027765:38520-38539 None:intergenic 45.0%
! AGAAAGAGAAGGGTGTGGTT+AGG + tig0027765:38655-38674 Msa1435670:intron 45.0%
! AGGAACATTTGAGACAGCAG+AGG + tig0027765:38675-38694 Msa1435670:CDS 45.0%
GCTAGTGACACCCCTTATAA+TGG + tig0027765:38793-38812 Msa1435670:CDS 45.0%
AGTGACACCCCTTATAATGG+TGG + tig0027765:38796-38815 Msa1435670:CDS 45.0%
ACCCCTTATAATGGTGGTAG+TGG + tig0027765:38802-38821 Msa1435670:CDS 45.0%
TGATTCTTTCTTGCCTCCCA+AGG + tig0027765:38834-38853 Msa1435670:CDS 45.0%
TCATGAGGGTTGAACTTGGT+GGG + tig0027765:39001-39020 Msa1435670:CDS 45.0%
CTATAGTCAAGCCTAGAGAG+TGG + tig0027765:38086-38105 Msa1435670:five_prime_UTR 45.0%
CGGTGTGGAAATATGAGCAT+AGG - tig0027765:38290-38309 None:intergenic 45.0%
CAAAGAAGTTCAGAGGAGTC+AGG + tig0027765:38459-38478 Msa1435670:CDS 45.0%
GAGGGAATTACAACAAAGGG+TGG - tig0027765:38520-38539 None:intergenic 45.0%
! AGAAAGAGAAGGGTGTGGTT+AGG + tig0027765:38655-38674 Msa1435670:intron 45.0%
! AGGAACATTTGAGACAGCAG+AGG + tig0027765:38675-38694 Msa1435670:CDS 45.0%
GCTAGTGACACCCCTTATAA+TGG + tig0027765:38793-38812 Msa1435670:CDS 45.0%
AGTGACACCCCTTATAATGG+TGG + tig0027765:38796-38815 Msa1435670:CDS 45.0%
ACCCCTTATAATGGTGGTAG+TGG + tig0027765:38802-38821 Msa1435670:CDS 45.0%
TGATTCTTTCTTGCCTCCCA+AGG + tig0027765:38834-38853 Msa1435670:CDS 45.0%
TCATGAGGGTTGAACTTGGT+GGG + tig0027765:39001-39020 Msa1435670:CDS 45.0%
GTTGCAGAAAGAGAAGGGTG+TGG + tig0027765:38650-38669 Msa1435670:intron 50.0%
!! AGTAGCTCAGAGAGTGCCTT+GGG - tig0027765:38853-38872 None:intergenic 50.0%
GGAGTGTGGCAAAAAAGAGC+TGG + tig0027765:38955-38974 Msa1435670:CDS 50.0%
TGGGTCATGAGGGTTGAACT+TGG + tig0027765:38997-39016 Msa1435670:CDS 50.0%
GTCATGAGGGTTGAACTTGG+TGG + tig0027765:39000-39019 Msa1435670:CDS 50.0%
GGCTTGACTATAGAGTTGGC+CGG - tig0027765:38079-38098 None:intergenic 50.0%
GTTGCAGAAAGAGAAGGGTG+TGG + tig0027765:38650-38669 Msa1435670:intron 50.0%
!! AGTAGCTCAGAGAGTGCCTT+GGG - tig0027765:38853-38872 None:intergenic 50.0%
GGAGTGTGGCAAAAAAGAGC+TGG + tig0027765:38955-38974 Msa1435670:CDS 50.0%
TGGGTCATGAGGGTTGAACT+TGG + tig0027765:38997-39016 Msa1435670:CDS 50.0%
GTCATGAGGGTTGAACTTGG+TGG + tig0027765:39000-39019 Msa1435670:CDS 50.0%
!! GAGTAGCTCAGAGAGTGCCT+TGG - tig0027765:38854-38873 None:intergenic 55.0%
!! GAGTAGCTCAGAGAGTGCCT+TGG - tig0027765:38854-38873 None:intergenic 55.0%
!! AGCTCAGAGAGTGCCTTGGG+AGG - tig0027765:38850-38869 None:intergenic 60.0%
!! AGCTCAGAGAGTGCCTTGGG+AGG - tig0027765:38850-38869 None:intergenic 60.0%
AGGAGTCAGGCAGCGCCAGT+GGG + tig0027765:38472-38491 Msa1435670:CDS 65.0%
CTGACACCCAAGAGCCCCAC+TGG - tig0027765:38490-38509 None:intergenic 65.0%
AGGAGTCAGGCAGCGCCAGT+GGG + tig0027765:38472-38491 Msa1435670:CDS 65.0%
CTGACACCCAAGAGCCCCAC+TGG - tig0027765:38490-38509 None:intergenic 65.0%
GAGGAGTCAGGCAGCGCCAG+TGG + tig0027765:38471-38490 Msa1435670:CDS 70.0%
GGAGTCAGGCAGCGCCAGTG+GGG + tig0027765:38473-38492 Msa1435670:CDS 70.0%
GCAGCGCCAGTGGGGCTCTT+GGG + tig0027765:38481-38500 Msa1435670:CDS 70.0%
GAGGAGTCAGGCAGCGCCAG+TGG + tig0027765:38471-38490 Msa1435670:CDS 70.0%
GGAGTCAGGCAGCGCCAGTG+GGG + tig0027765:38473-38492 Msa1435670:CDS 70.0%
GCAGCGCCAGTGGGGCTCTT+GGG + tig0027765:38481-38500 Msa1435670:CDS 70.0%
GGCAGCGCCAGTGGGGCTCT+TGG + tig0027765:38480-38499 Msa1435670:CDS 75.0%
GGCAGCGCCAGTGGGGCTCT+TGG + tig0027765:38480-38499 Msa1435670:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0027765 gene 38079 39502 38079 ID=Msa1435670;Name=Msa1435670
tig0027765 mRNA 38079 39502 38079 ID=Msa1435670-mRNA-1;Parent=Msa1435670;Name=Msa1435670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=139|1|1|1|1|1|2|296|286
tig0027765 exon 38079 38528 38079 ID=Msa1435670-mRNA-1:exon:9793;Parent=Msa1435670-mRNA-1
tig0027765 exon 38657 39502 38657 ID=Msa1435670-mRNA-1:exon:9794;Parent=Msa1435670-mRNA-1
tig0027765 five_prime_UTR 38079 38217 38079 ID=Msa1435670-mRNA-1:five_prime_utr;Parent=Msa1435670-mRNA-1
tig0027765 CDS 38218 38528 38218 ID=Msa1435670-mRNA-1:cds;Parent=Msa1435670-mRNA-1
tig0027765 CDS 38657 39206 38657 ID=Msa1435670-mRNA-1:cds;Parent=Msa1435670-mRNA-1
tig0027765 three_prime_UTR 39207 39502 39207 ID=Msa1435670-mRNA-1:three_prime_utr;Parent=Msa1435670-mRNA-1
Gene Sequence

>Msa1435670

ATGGATTTTATCAAACTTGTGCTGGTGAAACTTTTATTGCATATGTACTGTTTCAATCCCACTTTTCGTCCTATGCTCATATTTCCACACCGACAACCCAATATAAATAAATTTAGCAATATCACCACTTACTCACATCAACATACACATTTCACATTATATTATTATATGTTTTATGTATACCTCAGAAATATAAGCTTTATTAATTCCCAACCAAGGAAAGGAAATATGGTACAACAAACAAAGAAGTTCAGAGGAGTCAGGCAGCGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCACCCTTTGTTAAAGAGAAGGGTGTGGTTAGGAACATTTGAGACAGCAGAGGCAGCAGCAAGAGCATATGATCAAGCTGCAATTTTGATGAATGGTCAAAGTGCAAAGACTAATTTTCCTGTGTCAAAGAATCAAGGTGAAGAAGTTGCTAGTGACACCCCTTATAATGGTGGTAGTGGTAGTGGTGATGATTCTTTCTTGCCTCCCAAGGCACTCTCTGAGCTACTCAGCACAAAGCTTAGAAAGTATTGCAAAGACCCTTCTCCATCACTTACTTGTTTGAGGCTAGATAATGATAATTCTCACATTGGAGTGTGGCAAAAAAGAGCTGGACCACATTCTGATTCTAATTGGGTCATGAGGGTTGAACTTGGTGGGAAGAAAAAGACTATAGAGTCAGAAGAGATAGGATCAAAACAACACACTATTGATGGTGGTAATAATGGTAATGCTGATAATGAAAATAGGTTGGTAGTAGAAGAAGAGGAGAGAGTTGCTTTGCAGATGATTGAAGAGTTACTTAATTGGAACTATCCATGTGGATCAACTTCAAGTAATTAA
Protein sequence

>Msa1435670

MDFIKLVLVKLLLHMYCFNPTFRPMLIFPHRQPNINKFSNITTYSHQHTHFTLYYYMFYVYLRNISFINSQPRKGNMVQQTKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQSAKTNFPVSKNQGEEVASDTPYNGGSGSGDDSFLPPKALSELLSTKLRKYCKDPSPSLTCLRLDNDNSHIGVWQKRAGPHSDSNWVMRVELGGKKKTIESEEIGSKQHTIDGGNNGNADNENRLVVEEEERVALQMIEELLNWNYPCGSTSSN*