Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083080 | XP_003626125.1 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083080 | sp|Q9SFF6|PAE12_ARATH | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083080 | Q2HRU2 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0481140 | Msa1083080 | 0.807988 | 3.862289e-50 | -8.615850e-47 |
| Msa1003740 | Msa1083080 | 0.816399 | 5.642909e-52 | -8.615850e-47 |
| Msa1003800 | Msa1083080 | 0.821242 | 4.480121e-53 | -8.615850e-47 |
| Msa1003930 | Msa1083080 | 0.815258 | 1.013880e-51 | -8.615850e-47 |
| Msa1040310 | Msa1083080 | 0.943313 | 1.507486e-102 | -8.615850e-47 |
| Msa1083080 | Msa1127960 | 0.966767 | 2.312984e-126 | -8.615850e-47 |
| Msa1083080 | Msa1217910 | 0.819168 | 1.337860e-52 | -8.615850e-47 |
| Msa1083080 | Msa1351780 | 0.928328 | 3.372488e-92 | -8.615850e-47 |
| Msa0483910 | Msa1083080 | 0.824205 | 9.157436e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083080 | MtrunA17_Chr7g0271231 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Msa1083080 | MtrunA17_Chr1g0193381 | 75.943 | 424 | 93 | 3 | 1 | 424 | 1 | 415 | 0.0 | 670 |
| Msa1083080 | MtrunA17_Chr7g0270931 | 71.662 | 367 | 104 | 0 | 59 | 425 | 49 | 415 | 0.0 | 592 |
| Msa1083080 | MtrunA17_Chr1g0193761 | 69.430 | 386 | 116 | 1 | 41 | 424 | 17 | 402 | 0.0 | 584 |
| Msa1083080 | MtrunA17_Chr4g0069571 | 65.023 | 426 | 130 | 2 | 3 | 425 | 12 | 421 | 0.0 | 582 |
| Msa1083080 | MtrunA17_Chr5g0408881 | 54.144 | 362 | 164 | 1 | 62 | 421 | 29 | 390 | 6.65e-151 | 435 |
| Msa1083080 | MtrunA17_Chr8g0369681 | 51.733 | 375 | 177 | 2 | 52 | 424 | 19 | 391 | 2.39e-148 | 427 |
| Msa1083080 | MtrunA17_Chr8g0369651 | 51.771 | 367 | 175 | 1 | 60 | 424 | 26 | 392 | 3.39e-146 | 421 |
| Msa1083080 | MtrunA17_Chr1g0203101 | 53.930 | 369 | 165 | 3 | 60 | 423 | 37 | 405 | 9.18e-145 | 418 |
| Msa1083080 | MtrunA17_Chr1g0203121 | 53.659 | 369 | 166 | 3 | 60 | 423 | 37 | 405 | 1.53e-142 | 412 |
| Msa1083080 | MtrunA17_Chr7g0238491 | 50.802 | 374 | 172 | 4 | 61 | 425 | 56 | 426 | 3.59e-139 | 405 |
| Msa1083080 | MtrunA17_Chr5g0418101 | 50.276 | 362 | 174 | 2 | 61 | 420 | 41 | 398 | 6.85e-137 | 398 |
| Msa1083080 | MtrunA17_Chr1g0163701 | 57.843 | 102 | 43 | 0 | 243 | 344 | 271 | 372 | 1.03e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083080 | AT3G05910.1 | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0.0 | 619 |
| Msa1083080 | AT5G26670.1 | 68.706 | 425 | 122 | 3 | 1 | 424 | 1 | 415 | 0.0 | 613 |
| Msa1083080 | AT1G57590.1 | 73.352 | 364 | 97 | 0 | 61 | 424 | 79 | 442 | 0.0 | 590 |
| Msa1083080 | AT3G62060.2 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 567 |
| Msa1083080 | AT3G62060.1 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 566 |
| Msa1083080 | AT2G46930.1 | 60.714 | 420 | 147 | 3 | 5 | 424 | 14 | 415 | 0.0 | 556 |
| Msa1083080 | AT5G26670.3 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1083080 | AT5G26670.2 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1083080 | AT5G26670.4 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1083080 | AT1G09550.1 | 59.128 | 367 | 146 | 2 | 40 | 403 | 17 | 382 | 3.98e-163 | 464 |
| Msa1083080 | AT4G19420.1 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| Msa1083080 | AT4G19420.2 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| Msa1083080 | AT5G23870.1 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| Msa1083080 | AT5G23870.4 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| Msa1083080 | AT5G23870.2 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 9.01e-150 | 432 |
| Msa1083080 | AT5G23870.3 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 1.14e-149 | 432 |
| Msa1083080 | AT4G19420.4 | 50.000 | 412 | 169 | 2 | 51 | 425 | 14 | 425 | 1.24e-149 | 432 |
| Msa1083080 | AT3G05910.2 | 64.725 | 309 | 103 | 2 | 8 | 316 | 4 | 306 | 4.93e-149 | 426 |
| Msa1083080 | AT3G09410.1 | 47.307 | 427 | 207 | 4 | 2 | 425 | 16 | 427 | 7.92e-144 | 417 |
| Msa1083080 | AT3G09405.1 | 45.606 | 421 | 202 | 4 | 2 | 419 | 13 | 409 | 4.65e-136 | 396 |
| Msa1083080 | AT5G45280.2 | 49.307 | 361 | 180 | 2 | 62 | 419 | 24 | 384 | 6.95e-135 | 393 |
| Msa1083080 | AT4G19410.1 | 49.030 | 361 | 181 | 2 | 62 | 419 | 24 | 384 | 1.70e-134 | 392 |
| Msa1083080 | AT4G19410.2 | 49.128 | 344 | 173 | 1 | 62 | 403 | 24 | 367 | 2.38e-127 | 378 |
| Msa1083080 | AT3G09410.3 | 51.796 | 334 | 158 | 1 | 61 | 391 | 60 | 393 | 1.66e-125 | 369 |
| Msa1083080 | AT5G45280.1 | 52.128 | 282 | 133 | 1 | 62 | 341 | 24 | 305 | 4.16e-109 | 326 |
| Msa1083080 | AT3G09405.2 | 49.175 | 303 | 149 | 2 | 120 | 419 | 2 | 302 | 3.31e-108 | 322 |
| Msa1083080 | AT4G19420.3 | 56.522 | 230 | 98 | 1 | 51 | 278 | 14 | 243 | 2.86e-90 | 276 |
Find 116 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATCACCAACTTGGTTTA+TGG | 0.071657 | 7_2:-83307065 | Msa1083080:CDS |
| AATTCAGAGGACAGCGAATT+TGG | 0.187648 | 7_2:-83305841 | Msa1083080:CDS |
| GCTAATCAGGCTCTTCTTTC+CGG | 0.191020 | 7_2:-83305776 | Msa1083080:CDS |
| ATACATCACCTTGCAGAAAT+TGG | 0.207626 | 7_2:+83304724 | None:intergenic |
| CAGACAATTCTCCGGTTATT+AGG | 0.224305 | 7_2:-83304482 | Msa1083080:CDS |
| ATCTTTATAATCAAGCTAAA+AGG | 0.236684 | 7_2:+83303941 | None:intergenic |
| AATGGAAGATTTGATGTTAA+AGG | 0.242008 | 7_2:-83305810 | Msa1083080:CDS |
| TGTGATGGTGGCTCATTTAC+TGG | 0.246928 | 7_2:-83306228 | Msa1083080:CDS |
| TTGGTTTATGGGTTTGAATT+AGG | 0.260228 | 7_2:-83307053 | Msa1083080:CDS |
| TACCATTTGCATCGCGGATA+TGG | 0.260953 | 7_2:-83306777 | Msa1083080:CDS |
| TATGGGTTTGAATTAGGATA+TGG | 0.270691 | 7_2:-83307047 | Msa1083080:CDS |
| TTGATTGTCATCGGTGAAAT+TGG | 0.280151 | 7_2:-83304095 | Msa1083080:three_prime_UTR |
| TTATCACCAACTTGGTTTAT+GGG | 0.298292 | 7_2:-83307064 | Msa1083080:CDS |
| TCAATACTGCTTATGATTCA+TGG | 0.299224 | 7_2:-83305084 | Msa1083080:CDS |
| TGAAGAACTCTTTCTGTTAG+AGG | 0.300195 | 7_2:-83306994 | Msa1083080:CDS |
| CAGTTGGCTTGTTAATTTAG+AGG | 0.330535 | 7_2:-83306742 | Msa1083080:intron |
| AATTATAGGATTGATATATC+TGG | 0.336116 | 7_2:-83305534 | Msa1083080:intron |
| TAGCAGCTGCATTGTGGATA+AGG | 0.344441 | 7_2:+83306910 | None:intergenic |
| ATGGAAGATTTGATGTTAAA+GGG | 0.348581 | 7_2:-83305809 | Msa1083080:CDS |
| CACTTCACTTTAGTAGTCCT+TGG | 0.363666 | 7_2:+83305695 | None:intergenic |
| TATGATGTTAAGGAACAAAA+AGG | 0.371526 | 7_2:+83304036 | None:intergenic |
| CCTTGCAGAAATTGGATTTG+TGG | 0.382065 | 7_2:+83304732 | None:intergenic |
| TTCACCTTGTTCCTAATAAC+CGG | 0.384001 | 7_2:+83304471 | None:intergenic |
| TGATAATACATGTCACCATT+TGG | 0.393033 | 7_2:-83304224 | Msa1083080:CDS |
| CAGCAGATCCCCATGGCTAT+TGG | 0.396660 | 7_2:-83304791 | Msa1083080:CDS |
| CTTCTTTCCGGATGTTCAGC+GGG | 0.402249 | 7_2:-83305764 | Msa1083080:CDS |
| ATTCAGAGGACAGCGAATTT+GGG | 0.404061 | 7_2:-83305840 | Msa1083080:CDS |
| CAACACCACTGTACATATTC+CGG | 0.405411 | 7_2:+83305499 | None:intergenic |
| TTACTAAGTATTCCTGTGAA+TGG | 0.407702 | 7_2:+83306410 | None:intergenic |
| ATGTATCTTGCCTCTCGGTT+TGG | 0.417685 | 7_2:+83304511 | None:intergenic |
| AGCAGCTGCATTGTGGATAA+GGG | 0.417871 | 7_2:+83306911 | None:intergenic |
| GCATCCTTTCTTGAGGGTAA+TGG | 0.436523 | 7_2:-83306957 | Msa1083080:CDS |
| TAGGTAATTGCTTTAGCTGT+TGG | 0.437321 | 7_2:-83304301 | Msa1083080:CDS |
| GCTGCATACTTATGATGTTA+AGG | 0.437924 | 7_2:+83304026 | None:intergenic |
| TTGGTTTCTTGCAGTGTGCT+TGG | 0.438110 | 7_2:-83306817 | Msa1083080:intron |
| AATATGTACAGTGGTGTTGT+AGG | 0.448233 | 7_2:-83305495 | Msa1083080:CDS |
| TAGGCCACCCGCTGAACATC+CGG | 0.448568 | 7_2:+83305757 | None:intergenic |
| GCGAATTTGGGCAGCTGCAA+TGG | 0.455500 | 7_2:-83305828 | Msa1083080:CDS |
| TACTGGAGATGGTGAAGATC+AGG | 0.456973 | 7_2:-83306211 | Msa1083080:intron |
| TTTCTTGCAGTGTGCTTGGA+TGG | 0.462046 | 7_2:-83306813 | Msa1083080:intron |
| TTGCTTTAGCTGTTGGAGAC+TGG | 0.466598 | 7_2:-83304294 | Msa1083080:CDS |
| GTCTCTTGAATACAGGGTTC+AGG | 0.466892 | 7_2:-83304614 | Msa1083080:intron |
| AATAAACCTGAAGAAAATCC+AGG | 0.477981 | 7_2:-83306389 | Msa1083080:intron |
| ATCCACAATGCAGCTGCTAA+AGG | 0.480879 | 7_2:-83306906 | Msa1083080:CDS |
| GTGAAGTGTCTTAGCGATGC+AGG | 0.481043 | 7_2:-83305680 | Msa1083080:CDS |
| ATTTCCATTACCCTCAAGAA+AGG | 0.487996 | 7_2:+83306953 | None:intergenic |
| TAACTTGATTTGATTGTCAT+CGG | 0.489011 | 7_2:-83304104 | Msa1083080:three_prime_UTR |
| TTCTCAAGATCAAACAAGAA+TGG | 0.489491 | 7_2:-83304564 | Msa1083080:CDS |
| ATCCATATCCGCGATGCAAA+TGG | 0.493817 | 7_2:+83306775 | None:intergenic |
| TCTTTATAATCAAGCTAAAA+GGG | 0.494899 | 7_2:+83303942 | None:intergenic |
| AATTTCGAGGTCTCTTTCCA+AGG | 0.497114 | 7_2:-83305712 | Msa1083080:CDS |
| ATCATCATTATACATGGAAA+AGG | 0.501178 | 7_2:-83306438 | Msa1083080:CDS |
| TTGCATCGCGGATATGGATC+AGG | 0.503138 | 7_2:-83306771 | Msa1083080:CDS |
| TGGCTCAACTGAAAACCAAA+TGG | 0.503838 | 7_2:+83304209 | None:intergenic |
| CTCCTTTAGCAGCTGCATTG+TGG | 0.510189 | 7_2:+83306904 | None:intergenic |
| TGCATTCATGCCAATAGCCA+TGG | 0.510756 | 7_2:+83304781 | None:intergenic |
| CATGCAGCATCCTTTCTTGA+GGG | 0.518276 | 7_2:-83306963 | Msa1083080:CDS |
| ATACACTGTGATGAATTTCG+AGG | 0.519543 | 7_2:-83305725 | Msa1083080:CDS |
| AGAATACTTTGTCAGGGAGG+TGG | 0.520652 | 7_2:-83306512 | Msa1083080:intron |
| ACCCAGAAAAGTTTAGCCAT+TGG | 0.528435 | 7_2:+83307107 | None:intergenic |
| TAGCCATGGGGATCTGCTGA+TGG | 0.530490 | 7_2:+83304795 | None:intergenic |
| TCGTACATGATCATCATCAA+TGG | 0.532122 | 7_2:-83304182 | Msa1083080:three_prime_UTR |
| AGGACTTGTTATCACCAACT+TGG | 0.533797 | 7_2:-83307072 | Msa1083080:CDS |
| TGATGATCATGTACGAACTT+TGG | 0.542070 | 7_2:+83304189 | None:intergenic |
| GCATTCATGCCAATAGCCAT+GGG | 0.548266 | 7_2:+83304782 | None:intergenic |
| GTAAAGCTTCGTTATTGTGA+TGG | 0.550885 | 7_2:-83306243 | Msa1083080:CDS |
| CAGTGGTGTTGTAGGGATGC+AGG | 0.553790 | 7_2:-83305487 | Msa1083080:intron |
| CCGCGATGCAAATGGTAACC+AGG | 0.555736 | 7_2:+83306783 | None:intergenic |
| TGCTTGGATGGAACATTACC+TGG | 0.558834 | 7_2:-83306801 | Msa1083080:CDS |
| TTCAAACCCATAAACCAAGT+TGG | 0.559248 | 7_2:+83307058 | None:intergenic |
| AATGCAGCTGCTAAAGGAGC+AGG | 0.563358 | 7_2:-83306900 | Msa1083080:intron |
| AAACCGAGAGGCAAGATACA+TGG | 0.565165 | 7_2:-83304509 | Msa1083080:CDS |
| GCGTGGATCATCATTATACA+TGG | 0.565339 | 7_2:-83306444 | Msa1083080:CDS |
| TACTGCTTATGATTCATGGC+AGG | 0.565480 | 7_2:-83305080 | Msa1083080:intron |
| TCTTCTTTCCGGATGTTCAG+CGG | 0.565522 | 7_2:-83305765 | Msa1083080:CDS |
| GTGGCCTTGTGCATTTAGCA+TGG | 0.567737 | 7_2:+83304751 | None:intergenic |
| GTGTTTATCGCAAGAAAACA+CGG | 0.570483 | 7_2:-83306466 | Msa1083080:CDS |
| AGAAACATTGTCATCGCCAA+TGG | 0.576057 | 7_2:-83307123 | Msa1083080:exon |
| ACATGCAGCATCCTTTCTTG+AGG | 0.576567 | 7_2:-83306964 | Msa1083080:CDS |
| CACAGTGTATAATAGTAGCT+AGG | 0.579094 | 7_2:+83305738 | None:intergenic |
| GGTGGCTCATTTACTGGAGA+TGG | 0.581728 | 7_2:-83306222 | Msa1083080:CDS |
| ACACTGGCAATCAAATTCTG+AGG | 0.583315 | 7_2:+83305127 | None:intergenic |
| ATGATTATGATTACCGAGGT+AGG | 0.584023 | 7_2:+83305292 | None:intergenic |
| CATGTATTATCACAAGGGTA+AGG | 0.587582 | 7_2:+83304235 | None:intergenic |
| ATGGATCAGGAGCAAACAGT+TGG | 0.589134 | 7_2:-83306758 | Msa1083080:CDS |
| TTCACTATTTGGGAATGCTG+AGG | 0.589472 | 7_2:-83304064 | Msa1083080:three_prime_UTR |
| CACTGGCAATCAAATTCTGA+GGG | 0.591267 | 7_2:+83305128 | None:intergenic |
| CTTTCCGGATGTTCAGCGGG+TGG | 0.596559 | 7_2:-83305761 | Msa1083080:CDS |
| GAAAAGGAGATACCATTCAC+AGG | 0.596897 | 7_2:-83306422 | Msa1083080:CDS |
| AAACCATGTATCTTGCCTCT+CGG | 0.596928 | 7_2:+83304506 | None:intergenic |
| AAGCTTCGTTATTGTGATGG+TGG | 0.600562 | 7_2:-83306240 | Msa1083080:CDS |
| CATCATAAGTATGCAGCCGT+AGG | 0.608287 | 7_2:-83304020 | Msa1083080:three_prime_UTR |
| TGGTGACATGTATTATCACA+AGG | 0.608610 | 7_2:+83304229 | None:intergenic |
| TGAAGTGTCTTAGCGATGCA+GGG | 0.608865 | 7_2:-83305679 | Msa1083080:CDS |
| TGATTACCGAGGTAGGATCA+AGG | 0.612410 | 7_2:+83305299 | None:intergenic |
| ATATGTACAGTGGTGTTGTA+GGG | 0.613917 | 7_2:-83305494 | Msa1083080:CDS |
| CCATGGGGATCTGCTGATGG+AGG | 0.617825 | 7_2:+83304798 | None:intergenic |
| TACTTTGTCAGGGAGGTGGA+TGG | 0.621341 | 7_2:-83306508 | Msa1083080:intron |
| AGGGTGAGTCCTACGAGCAG+AGG | 0.626989 | 7_2:+83306930 | None:intergenic |
| TTCTCCGGTTATTAGGAACA+AGG | 0.636482 | 7_2:-83304475 | Msa1083080:intron |
| CACCACTGTACATATTCCGG+AGG | 0.638914 | 7_2:+83305502 | None:intergenic |
| AATGGAAATCCTCTGCTCGT+AGG | 0.640827 | 7_2:-83306939 | Msa1083080:CDS |
| CCTGGTTACCATTTGCATCG+CGG | 0.641969 | 7_2:-83306783 | Msa1083080:CDS |
| CCTCCATCAGCAGATCCCCA+TGG | 0.647413 | 7_2:-83304798 | Msa1083080:CDS |
| CCACAAATCCAATTTCTGCA+AGG | 0.649408 | 7_2:-83304732 | Msa1083080:intron |
| TACATGATCATCATCAATGG+AGG | 0.650804 | 7_2:-83304179 | Msa1083080:three_prime_UTR |
| TAATCACCTTGATCCTACCT+CGG | 0.661838 | 7_2:-83305305 | Msa1083080:intron |
| GAAGCAGAACTGCAATTCAG+AGG | 0.664323 | 7_2:-83305854 | Msa1083080:CDS |
| ACCACTGTACATATTCCGGA+GGG | 0.680732 | 7_2:+83305503 | None:intergenic |
| TATCGCAAGAAAACACGGCG+TGG | 0.683797 | 7_2:-83306461 | Msa1083080:CDS |
| AGGTGATTAGTACAAATCTG+TGG | 0.684849 | 7_2:+83305319 | None:intergenic |
| TCGCTCACTGCCAAACCGAG+AGG | 0.692246 | 7_2:-83304521 | Msa1083080:CDS |
| TAAACCATGCTAAATGCACA+AGG | 0.692567 | 7_2:-83304755 | Msa1083080:CDS |
| GGTGACATGTATTATCACAA+GGG | 0.699950 | 7_2:+83304230 | None:intergenic |
| ACCCTCCGGAATATGTACAG+TGG | 0.725020 | 7_2:-83305504 | Msa1083080:CDS |
| CATTCATGCCAATAGCCATG+GGG | 0.744235 | 7_2:+83304783 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGAAATAATTAAAGTTTT+AGG | - | chr7_2:83304408-83304427 | Msa1083080:intron | 10.0% |
| !!! | ATATGTAAAATTTGATATTT+TGG | - | chr7_2:83304923-83304942 | Msa1083080:intron | 10.0% |
| !!! | TATGTAAAATTTGATATTTT+GGG | - | chr7_2:83304924-83304943 | Msa1083080:intron | 10.0% |
| !! | TAACAAAAAATAATGAAAAA+GGG | - | chr7_2:83307116-83307135 | Msa1083080:exon | 10.0% |
| !!! | TTGCTTTTTTAATTTGTTAT+AGG | - | chr7_2:83304694-83304713 | Msa1083080:intron | 15.0% |
| !!! | GATTAATTTTTTTGTAATGA+TGG | + | chr7_2:83305436-83305455 | None:intergenic | 15.0% |
| !! | ATAAACTATTTGTAATAAGT+TGG | + | chr7_2:83305586-83305605 | None:intergenic | 15.0% |
| !! | AAATAGTTTATATTCTTTCA+TGG | - | chr7_2:83305595-83305614 | Msa1083080:intron | 15.0% |
| !! | ACATTTAATCATTTCATTAT+CGG | + | chr7_2:83306092-83306111 | None:intergenic | 15.0% |
| !! | AATGAAATGATTAAATGTAT+CGG | - | chr7_2:83306094-83306113 | Msa1083080:intron | 15.0% |
| !! | TTATTACTATATTATTCAGT+TGG | - | chr7_2:83306370-83306389 | Msa1083080:intron | 15.0% |
| !!! | TTCATTATTTTTTGTTACTT+TGG | + | chr7_2:83307113-83307132 | None:intergenic | 15.0% |
| !! | GTAACAAAAAATAATGAAAA+AGG | - | chr7_2:83307115-83307134 | Msa1083080:exon | 15.0% |
| !! | CAAAAATATTTAATGTTGAG+AGG | + | chr7_2:83304188-83304207 | None:intergenic | 20.0% |
| !!! | CTCTCAACATTAAATATTTT+TGG | - | chr7_2:83304186-83304205 | Msa1083080:three_prime_UTR | 20.0% |
| !!! | ATTTTCAGTTAATTATACCA+TGG | + | chr7_2:83304386-83304405 | None:intergenic | 20.0% |
| !! | AATTGAATGAAAATTAAACC+TGG | + | chr7_2:83304654-83304673 | None:intergenic | 20.0% |
| !!! | AATTTGCAGATTTTTTCAAT+TGG | - | chr7_2:83304750-83304769 | Msa1083080:CDS | 20.0% |
| !!! | AGTTAACTTTTATGCAAAAA+AGG | + | chr7_2:83304988-83305007 | None:intergenic | 20.0% |
| !! | TTTGTTTGCATTGAAATTAT+AGG | - | chr7_2:83305474-83305493 | Msa1083080:intron | 20.0% |
| !! | AATTATAGGATTGATATATC+TGG | - | chr7_2:83305488-83305507 | Msa1083080:CDS | 20.0% |
| !! | AAATAATAGTATATGAGATG+TGG | - | chr7_2:83306019-83306038 | Msa1083080:intron | 20.0% |
| !! | TCTTTATAATCAAGCTAAAA+GGG | + | chr7_2:83307083-83307102 | None:intergenic | 20.0% |
| !! | ATCTTTATAATCAAGCTAAA+AGG | + | chr7_2:83307084-83307103 | None:intergenic | 20.0% |
| ! | ATATTTAATGTTGAGAGGAA+AGG | + | chr7_2:83304183-83304202 | None:intergenic | 25.0% |
| !!! | TAGAGGTATTTCTTCTTATT+TGG | - | chr7_2:83304297-83304316 | Msa1083080:CDS | 25.0% |
| !!! | AACTTTTTTACAGCAGAAAA+GGG | + | chr7_2:83304471-83304490 | None:intergenic | 25.0% |
| !!! | TAACTTTTTTACAGCAGAAA+AGG | + | chr7_2:83304472-83304491 | None:intergenic | 25.0% |
| ! | ATCATCATTATACATGGAAA+AGG | - | chr7_2:83304584-83304603 | Msa1083080:CDS | 25.0% |
| !! | TTTTATGCAAAAAAGGATAC+AGG | + | chr7_2:83304981-83305000 | None:intergenic | 25.0% |
| ! | AATGGAAGATTTGATGTTAA+AGG | - | chr7_2:83305212-83305231 | Msa1083080:intron | 25.0% |
| ! | ATGGAAGATTTGATGTTAAA+GGG | - | chr7_2:83305213-83305232 | Msa1083080:intron | 25.0% |
| !! | TTTTGTAATGATGGTAGAAA+TGG | + | chr7_2:83305427-83305446 | None:intergenic | 25.0% |
| ! | ATTATTTGTTTGATCACTGT+AGG | - | chr7_2:83305663-83305682 | Msa1083080:intron | 25.0% |
| !!! | TTCAGTTTTGTCAAATAGTT+AGG | - | chr7_2:83305764-83305783 | Msa1083080:CDS | 25.0% |
| ! | TGAAAAAGGAGTAATAAAAC+AGG | + | chr7_2:83305865-83305884 | None:intergenic | 25.0% |
| ! | AATATCCTAAGTTTGTCAAT+TGG | - | chr7_2:83305967-83305986 | Msa1083080:intron | 25.0% |
| !! | TACATACATTGACTAAATGT+AGG | - | chr7_2:83306702-83306721 | Msa1083080:intron | 25.0% |
| !! | TAACTTGATTTGATTGTCAT+CGG | - | chr7_2:83306918-83306937 | Msa1083080:CDS | 25.0% |
| ! | TATGATGTTAAGGAACAAAA+AGG | + | chr7_2:83306989-83307008 | None:intergenic | 25.0% |
| !! | TAGATTTTAGATCAATCCTA+CGG | + | chr7_2:83307021-83307040 | None:intergenic | 25.0% |
| TTATCACCAACTTGGTTTAT+GGG | - | chr7_2:83303958-83303977 | Msa1083080:three_prime_UTR | 30.0% | |
| TTGGTTTATGGGTTTGAATT+AGG | - | chr7_2:83303969-83303988 | Msa1083080:three_prime_UTR | 30.0% | |
| TATGGGTTTGAATTAGGATA+TGG | - | chr7_2:83303975-83303994 | Msa1083080:three_prime_UTR | 30.0% | |
| AGGTTGTATTGTTTGTTTGT+AGG | + | chr7_2:83304153-83304172 | None:intergenic | 30.0% | |
| ! | GATGATCCTTTCTTTTCTTT+TGG | - | chr7_2:83304322-83304341 | Msa1083080:intron | 30.0% |
| ! | GAAGTACCAAAAGAAAAGAA+AGG | + | chr7_2:83304331-83304350 | None:intergenic | 30.0% |
| TAAAGAGAGAATACTTTGTC+AGG | - | chr7_2:83304503-83304522 | Msa1083080:CDS | 30.0% | |
| AAAGAGAGAATACTTTGTCA+GGG | - | chr7_2:83304504-83304523 | Msa1083080:CDS | 30.0% | |
| TTACTAAGTATTCCTGTGAA+TGG | + | chr7_2:83304615-83304634 | None:intergenic | 30.0% | |
| AATAAACCTGAAGAAAATCC+AGG | - | chr7_2:83304633-83304652 | Msa1083080:intron | 30.0% | |
| ! | ATTAAACCTGGATTTTCTTC+AGG | + | chr7_2:83304642-83304661 | None:intergenic | 30.0% |
| TAAGTAACTGACTAACAAAC+TGG | - | chr7_2:83304862-83304881 | Msa1083080:intron | 30.0% | |
| ! | CTTTATTTACGTATGTTGTC+TGG | - | chr7_2:83305137-83305156 | Msa1083080:CDS | 30.0% |
| ! | CATGGCTATGTTATTTAACA+TGG | - | chr7_2:83305613-83305632 | Msa1083080:intron | 30.0% |
| ACATGGTTGTAACATTTGTA+AGG | - | chr7_2:83305630-83305649 | Msa1083080:intron | 30.0% | |
| ATCAATGATTATGATTACCG+AGG | + | chr7_2:83305737-83305756 | None:intergenic | 30.0% | |
| TCAATACTGCTTATGATTCA+TGG | - | chr7_2:83305938-83305957 | Msa1083080:intron | 30.0% | |
| AACATTGGACACAATACTAA+CGG | - | chr7_2:83306052-83306071 | Msa1083080:intron | 30.0% | |
| TTCTCAAGATCAAACAAGAA+TGG | - | chr7_2:83306458-83306477 | Msa1083080:CDS | 30.0% | |
| TGATAATACATGTCACCATT+TGG | - | chr7_2:83306798-83306817 | Msa1083080:CDS | 30.0% | |
| !!! | TGGAAGTGTTTTTCACTATT+TGG | - | chr7_2:83306947-83306966 | Msa1083080:CDS | 30.0% |
| !!! | GGAAGTGTTTTTCACTATTT+GGG | - | chr7_2:83306948-83306967 | Msa1083080:CDS | 30.0% |
| ! | TTTTTGTTACATAGACGCAA+TGG | - | chr7_2:83307155-83307174 | Msa1083080:five_prime_UTR | 30.0% |
| ! | TTCTGGGTTTTCATTGCAAT+AGG | - | chr7_2:83303930-83303949 | Msa1083080:three_prime_UTR | 35.0% |
| GTTATCACCAACTTGGTTTA+TGG | - | chr7_2:83303957-83303976 | Msa1083080:three_prime_UTR | 35.0% | |
| TTCAAACCCATAAACCAAGT+TGG | + | chr7_2:83303967-83303986 | None:intergenic | 35.0% | |
| TGAAGAACTCTTTCTGTTAG+AGG | - | chr7_2:83304028-83304047 | Msa1083080:three_prime_UTR | 35.0% | |
| ATTTCCATTACCCTCAAGAA+AGG | + | chr7_2:83304072-83304091 | None:intergenic | 35.0% | |
| TTTAATGTTGAGAGGAAAGG+TGG | + | chr7_2:83304180-83304199 | None:intergenic | 35.0% | |
| !! | CAGTTGGCTTGTTAATTTAG+AGG | - | chr7_2:83304280-83304299 | Msa1083080:CDS | 35.0% |
| TGTAACATGCATATATGCCA+TGG | - | chr7_2:83304366-83304385 | Msa1083080:intron | 35.0% | |
| TTCTAACTGTCATCATGTGT+TGG | - | chr7_2:83304433-83304452 | Msa1083080:intron | 35.0% | |
| GTGTTTATCGCAAGAAAACA+CGG | - | chr7_2:83304556-83304575 | Msa1083080:CDS | 35.0% | |
| ATGAGCAACAATAACATGAG+AGG | + | chr7_2:83304726-83304745 | None:intergenic | 35.0% | |
| GTAAAGCTTCGTTATTGTGA+TGG | - | chr7_2:83304779-83304798 | Msa1083080:CDS | 35.0% | |
| CAAAAAAGGATACAGGTCTA+CGG | + | chr7_2:83304974-83304993 | None:intergenic | 35.0% | |
| CAAGTCATGTATCTCAACAA+TGG | + | chr7_2:83305073-83305092 | None:intergenic | 35.0% | |
| CACAGTGTATAATAGTAGCT+AGG | + | chr7_2:83305287-83305306 | None:intergenic | 35.0% | |
| ATACACTGTGATGAATTTCG+AGG | - | chr7_2:83305297-83305316 | Msa1083080:intron | 35.0% | |
| AATGATGGTAGAAATGGCAT+TGG | + | chr7_2:83305421-83305440 | None:intergenic | 35.0% | |
| !! | AATATGTACAGTGGTGTTGT+AGG | - | chr7_2:83305527-83305546 | Msa1083080:CDS | 35.0% |
| !! | ATATGTACAGTGGTGTTGTA+GGG | - | chr7_2:83305528-83305547 | Msa1083080:CDS | 35.0% |
| TGGTATTCTTGTGATTAGTG+TGG | + | chr7_2:83305566-83305585 | None:intergenic | 35.0% | |
| AGGTGATTAGTACAAATCTG+TGG | + | chr7_2:83305706-83305725 | None:intergenic | 35.0% | |
| ATGATTATGATTACCGAGGT+AGG | + | chr7_2:83305733-83305752 | None:intergenic | 35.0% | |
| AAAAAGTGGTGTTCTAACAC+TGG | + | chr7_2:83305914-83305933 | None:intergenic | 35.0% | |
| ! | GCAGTATTGAGAAGAAAAAG+TGG | + | chr7_2:83305928-83305947 | None:intergenic | 35.0% |
| GACTACCAATTGACAAACTT+AGG | + | chr7_2:83305975-83305994 | None:intergenic | 35.0% | |
| CTTGACTGAATCTGATAACA+AGG | + | chr7_2:83306197-83306216 | None:intergenic | 35.0% | |
| TAAACCATGCTAAATGCACA+AGG | - | chr7_2:83306267-83306286 | Msa1083080:intron | 35.0% | |
| ATACATCACCTTGCAGAAAT+TGG | + | chr7_2:83306301-83306320 | None:intergenic | 35.0% | |
| TTAGTACCATTCATTGCAAG+TGG | - | chr7_2:83306326-83306345 | Msa1083080:intron | 35.0% | |
| ! | TTTTCTCCACTTGCAATGAA+TGG | + | chr7_2:83306335-83306354 | None:intergenic | 35.0% |
| ! | ATGGTTTTCAGACAATTCTC+CGG | - | chr7_2:83306532-83306551 | Msa1083080:intron | 35.0% |
| TTCACCTTGTTCCTAATAAC+CGG | + | chr7_2:83306554-83306573 | None:intergenic | 35.0% | |
| TAGGTAATTGCTTTAGCTGT+TGG | - | chr7_2:83306721-83306740 | Msa1083080:intron | 35.0% | |
| !!! | TTTTGATCGAGAAGGTGTTA+AGG | - | chr7_2:83306753-83306772 | Msa1083080:CDS | 35.0% |
| CATGTATTATCACAAGGGTA+AGG | + | chr7_2:83306790-83306809 | None:intergenic | 35.0% | |
| GGTGACATGTATTATCACAA+GGG | + | chr7_2:83306795-83306814 | None:intergenic | 35.0% | |
| TGGTGACATGTATTATCACA+AGG | + | chr7_2:83306796-83306815 | None:intergenic | 35.0% | |
| TGATGATCATGTACGAACTT+TGG | + | chr7_2:83306836-83306855 | None:intergenic | 35.0% | |
| TCGTACATGATCATCATCAA+TGG | - | chr7_2:83306840-83306859 | Msa1083080:intron | 35.0% | |
| TACATGATCATCATCAATGG+AGG | - | chr7_2:83306843-83306862 | Msa1083080:intron | 35.0% | |
| TTGATTGTCATCGGTGAAAT+TGG | - | chr7_2:83306927-83306946 | Msa1083080:CDS | 35.0% | |
| GCTGCATACTTATGATGTTA+AGG | + | chr7_2:83306999-83307018 | None:intergenic | 35.0% | |
| AGAAACATTGTCATCGCCAA+TGG | - | chr7_2:83303899-83303918 | Msa1083080:three_prime_UTR | 40.0% | |
| ! | GCCAATGGCTAAACTTTTCT+GGG | - | chr7_2:83303914-83303933 | Msa1083080:three_prime_UTR | 40.0% |
| ACCCAGAAAAGTTTAGCCAT+TGG | + | chr7_2:83303918-83303937 | None:intergenic | 40.0% | |
| !! | AGGACTTGTTATCACCAACT+TGG | - | chr7_2:83303950-83303969 | Msa1083080:three_prime_UTR | 40.0% |
| TTACAGCAGAAAAGGGAAAG+TGG | + | chr7_2:83304464-83304483 | None:intergenic | 40.0% | |
| GCGTGGATCATCATTATACA+TGG | - | chr7_2:83304578-83304597 | Msa1083080:CDS | 40.0% | |
| GAAAAGGAGATACCATTCAC+AGG | - | chr7_2:83304600-83304619 | Msa1083080:CDS | 40.0% | |
| AAGCTTCGTTATTGTGATGG+TGG | - | chr7_2:83304782-83304801 | Msa1083080:CDS | 40.0% | |
| AGCAGAAACTTGTAAGAGCA+AGG | - | chr7_2:83305026-83305045 | Msa1083080:intron | 40.0% | |
| AATTCAGAGGACAGCGAATT+TGG | - | chr7_2:83305181-83305200 | Msa1083080:intron | 40.0% | |
| ATTCAGAGGACAGCGAATTT+GGG | - | chr7_2:83305182-83305201 | Msa1083080:intron | 40.0% | |
| ! | GGGAATGCATTTTGCTAATC+AGG | - | chr7_2:83305233-83305252 | Msa1083080:intron | 40.0% |
| AATTTCGAGGTCTCTTTCCA+AGG | - | chr7_2:83305310-83305329 | Msa1083080:CDS | 40.0% | |
| CACTTCACTTTAGTAGTCCT+TGG | + | chr7_2:83305330-83305349 | None:intergenic | 40.0% | |
| CAACACCACTGTACATATTC+CGG | + | chr7_2:83305526-83305545 | None:intergenic | 40.0% | |
| TAATCACCTTGATCCTACCT+CGG | - | chr7_2:83305717-83305736 | Msa1083080:CDS | 40.0% | |
| GAGGGAAGAAACACTGAAAA+AGG | + | chr7_2:83305879-83305898 | None:intergenic | 40.0% | |
| CACTGGCAATCAAATTCTGA+GGG | + | chr7_2:83305897-83305916 | None:intergenic | 40.0% | |
| ACACTGGCAATCAAATTCTG+AGG | + | chr7_2:83305898-83305917 | None:intergenic | 40.0% | |
| TACTGCTTATGATTCATGGC+AGG | - | chr7_2:83305942-83305961 | Msa1083080:intron | 40.0% | |
| TGTGGCAGTAACACAAACAT+TGG | - | chr7_2:83306037-83306056 | Msa1083080:intron | 40.0% | |
| GACTGAATCTGATAACAAGG+AGG | + | chr7_2:83306194-83306213 | None:intergenic | 40.0% | |
| CCTTGCAGAAATTGGATTTG+TGG | + | chr7_2:83306293-83306312 | None:intergenic | 40.0% | |
| CCACAAATCCAATTTCTGCA+AGG | - | chr7_2:83306290-83306309 | Msa1083080:intron | 40.0% | |
| TGAACCCTGTATTCAAGAGA+CGG | + | chr7_2:83306409-83306428 | None:intergenic | 40.0% | |
| AAACCATGTATCTTGCCTCT+CGG | + | chr7_2:83306519-83306538 | None:intergenic | 40.0% | |
| CAGACAATTCTCCGGTTATT+AGG | - | chr7_2:83306540-83306559 | Msa1083080:intron | 40.0% | |
| TTCTCCGGTTATTAGGAACA+AGG | - | chr7_2:83306547-83306566 | Msa1083080:intron | 40.0% | |
| !!! | GACTGGTATTTTGATCGAGA+AGG | - | chr7_2:83306745-83306764 | Msa1083080:CDS | 40.0% |
| TGGCTCAACTGAAAACCAAA+TGG | + | chr7_2:83306816-83306835 | None:intergenic | 40.0% | |
| TTCACTATTTGGGAATGCTG+AGG | - | chr7_2:83306958-83306977 | Msa1083080:CDS | 40.0% | |
| ! | CGCCAATGGCTAAACTTTTC+TGG | - | chr7_2:83303913-83303932 | Msa1083080:three_prime_UTR | 45.0% |
| ACATGCAGCATCCTTTCTTG+AGG | - | chr7_2:83304058-83304077 | Msa1083080:three_prime_UTR | 45.0% | |
| CATGCAGCATCCTTTCTTGA+GGG | - | chr7_2:83304059-83304078 | Msa1083080:three_prime_UTR | 45.0% | |
| GCATCCTTTCTTGAGGGTAA+TGG | - | chr7_2:83304065-83304084 | Msa1083080:three_prime_UTR | 45.0% | |
| AATGGAAATCCTCTGCTCGT+AGG | - | chr7_2:83304083-83304102 | Msa1083080:three_prime_UTR | 45.0% | |
| AGCAGCTGCATTGTGGATAA+GGG | + | chr7_2:83304114-83304133 | None:intergenic | 45.0% | |
| TAGCAGCTGCATTGTGGATA+AGG | + | chr7_2:83304115-83304134 | None:intergenic | 45.0% | |
| ATCCACAATGCAGCTGCTAA+AGG | - | chr7_2:83304116-83304135 | Msa1083080:three_prime_UTR | 45.0% | |
| TTGAGAGGAAAGGTGGAGAA+AGG | + | chr7_2:83304173-83304192 | None:intergenic | 45.0% | |
| TTGGTTTCTTGCAGTGTGCT+TGG | - | chr7_2:83304205-83304224 | Msa1083080:exon | 45.0% | |
| TTTCTTGCAGTGTGCTTGGA+TGG | - | chr7_2:83304209-83304228 | Msa1083080:exon | 45.0% | |
| TGCTTGGATGGAACATTACC+TGG | - | chr7_2:83304221-83304240 | Msa1083080:CDS | 45.0% | |
| TACCATTTGCATCGCGGATA+TGG | - | chr7_2:83304245-83304264 | Msa1083080:CDS | 45.0% | |
| ATCCATATCCGCGATGCAAA+TGG | + | chr7_2:83304250-83304269 | None:intergenic | 45.0% | |
| ATGGATCAGGAGCAAACAGT+TGG | - | chr7_2:83304264-83304283 | Msa1083080:CDS | 45.0% | |
| GAGAGAATACTTTGTCAGGG+AGG | - | chr7_2:83304507-83304526 | Msa1083080:CDS | 45.0% | |
| AGAATACTTTGTCAGGGAGG+TGG | - | chr7_2:83304510-83304529 | Msa1083080:CDS | 45.0% | |
| !! | TGTGATGGTGGCTCATTTAC+TGG | - | chr7_2:83304794-83304813 | Msa1083080:CDS | 45.0% |
| TACTGGAGATGGTGAAGATC+AGG | - | chr7_2:83304811-83304830 | Msa1083080:CDS | 45.0% | |
| GAAGCAGAACTGCAATTCAG+AGG | - | chr7_2:83305168-83305187 | Msa1083080:intron | 45.0% | |
| GCTAATCAGGCTCTTCTTTC+CGG | - | chr7_2:83305246-83305265 | Msa1083080:intron | 45.0% | |
| TCTTCTTTCCGGATGTTCAG+CGG | - | chr7_2:83305257-83305276 | Msa1083080:intron | 45.0% | |
| ! | TGAAGTGTCTTAGCGATGCA+GGG | - | chr7_2:83305343-83305362 | Msa1083080:intron | 45.0% |
| ACCACTGTACATATTCCGGA+GGG | + | chr7_2:83305522-83305541 | None:intergenic | 45.0% | |
| TGATTACCGAGGTAGGATCA+AGG | + | chr7_2:83305726-83305745 | None:intergenic | 45.0% | |
| AGTGTCGTGTCAATGCTACA+TGG | - | chr7_2:83306125-83306144 | Msa1083080:intron | 45.0% | |
| CATTCATGCCAATAGCCATG+GGG | + | chr7_2:83306242-83306261 | None:intergenic | 45.0% | |
| GCATTCATGCCAATAGCCAT+GGG | + | chr7_2:83306243-83306262 | None:intergenic | 45.0% | |
| TGCATTCATGCCAATAGCCA+TGG | + | chr7_2:83306244-83306263 | None:intergenic | 45.0% | |
| TTTCGCCGTCTCTTGAATAC+AGG | - | chr7_2:83306401-83306420 | Msa1083080:CDS | 45.0% | |
| TTCGCCGTCTCTTGAATACA+GGG | - | chr7_2:83306402-83306421 | Msa1083080:CDS | 45.0% | |
| GTCTCTTGAATACAGGGTTC+AGG | - | chr7_2:83306408-83306427 | Msa1083080:CDS | 45.0% | |
| ATGTATCTTGCCTCTCGGTT+TGG | + | chr7_2:83306514-83306533 | None:intergenic | 45.0% | |
| AAACCGAGAGGCAAGATACA+TGG | - | chr7_2:83306513-83306532 | Msa1083080:intron | 45.0% | |
| TTGCTTTAGCTGTTGGAGAC+TGG | - | chr7_2:83306728-83306747 | Msa1083080:intron | 45.0% | |
| CATCATAAGTATGCAGCCGT+AGG | - | chr7_2:83307002-83307021 | Msa1083080:CDS | 45.0% | |
| CTCCTTTAGCAGCTGCATTG+TGG | + | chr7_2:83304121-83304140 | None:intergenic | 50.0% | |
| AATGCAGCTGCTAAAGGAGC+AGG | - | chr7_2:83304122-83304141 | Msa1083080:three_prime_UTR | 50.0% | |
| CCTGGTTACCATTTGCATCG+CGG | - | chr7_2:83304239-83304258 | Msa1083080:CDS | 50.0% | |
| TTGCATCGCGGATATGGATC+AGG | - | chr7_2:83304251-83304270 | Msa1083080:CDS | 50.0% | |
| TACTTTGTCAGGGAGGTGGA+TGG | - | chr7_2:83304514-83304533 | Msa1083080:CDS | 50.0% | |
| TATCGCAAGAAAACACGGCG+TGG | - | chr7_2:83304561-83304580 | Msa1083080:CDS | 50.0% | |
| GGTGGCTCATTTACTGGAGA+TGG | - | chr7_2:83304800-83304819 | Msa1083080:CDS | 50.0% | |
| CGTATGTTGTCTGGTGAGAC+AGG | - | chr7_2:83305146-83305165 | Msa1083080:intron | 50.0% | |
| CTTCTTTCCGGATGTTCAGC+GGG | - | chr7_2:83305258-83305277 | Msa1083080:intron | 50.0% | |
| ! | GTGAAGTGTCTTAGCGATGC+AGG | - | chr7_2:83305342-83305361 | Msa1083080:intron | 50.0% |
| ACCCTCCGGAATATGTACAG+TGG | - | chr7_2:83305518-83305537 | Msa1083080:CDS | 50.0% | |
| CACCACTGTACATATTCCGG+AGG | + | chr7_2:83305523-83305542 | None:intergenic | 50.0% | |
| !! | GTGGCCTTGTGCATTTAGCA+TGG | + | chr7_2:83306274-83306293 | None:intergenic | 50.0% |
| CCGCGATGCAAATGGTAACC+AGG | + | chr7_2:83304242-83304261 | None:intergenic | 55.0% | |
| GCGAATTTGGGCAGCTGCAA+TGG | - | chr7_2:83305194-83305213 | Msa1083080:intron | 55.0% | |
| !! | CAGTGGTGTTGTAGGGATGC+AGG | - | chr7_2:83305535-83305554 | Msa1083080:intron | 55.0% |
| TAGCCATGGGGATCTGCTGA+TGG | + | chr7_2:83306230-83306249 | None:intergenic | 55.0% | |
| CAGCAGATCCCCATGGCTAT+TGG | - | chr7_2:83306231-83306250 | Msa1083080:CDS | 55.0% | |
| AGGGTGAGTCCTACGAGCAG+AGG | + | chr7_2:83304095-83304114 | None:intergenic | 60.0% | |
| CTTTCCGGATGTTCAGCGGG+TGG | - | chr7_2:83305261-83305280 | Msa1083080:intron | 60.0% | |
| TAGGCCACCCGCTGAACATC+CGG | + | chr7_2:83305268-83305287 | None:intergenic | 60.0% | |
| CCATGGGGATCTGCTGATGG+AGG | + | chr7_2:83306227-83306246 | None:intergenic | 60.0% | |
| CCTCCATCAGCAGATCCCCA+TGG | - | chr7_2:83306224-83306243 | Msa1083080:CDS | 60.0% | |
| TCGCTCACTGCCAAACCGAG+AGG | - | chr7_2:83306501-83306520 | Msa1083080:intron | 60.0% | |
| TATCTGGCGAGCGCACCCTC+CGG | - | chr7_2:83305504-83305523 | Msa1083080:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 83303866 | 83307178 | 83303866 | ID=Msa1083080;Name=Msa1083080 |
| chr7_2 | mRNA | 83303866 | 83307178 | 83303866 | ID=Msa1083080-mRNA-1;Parent=Msa1083080;Name=Msa1083080-mRNA-1;_AED=0.13;_eAED=0.13;_QI=52|1|1|1|1|1|11|347|425 |
| chr7_2 | exon | 83303866 | 83304320 | 83303866 | ID=Msa1083080-mRNA-1:exon:21854;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83304476 | 83304621 | 83304476 | ID=Msa1083080-mRNA-1:exon:21853;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83304733 | 83304838 | 83304733 | ID=Msa1083080-mRNA-1:exon:21852;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83305081 | 83305158 | 83305081 | ID=Msa1083080-mRNA-1:exon:21851;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83305306 | 83305359 | 83305306 | ID=Msa1083080-mRNA-1:exon:21850;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83305488 | 83305548 | 83305488 | ID=Msa1083080-mRNA-1:exon:21849;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83305665 | 83305876 | 83305665 | ID=Msa1083080-mRNA-1:exon:21848;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83306212 | 83306285 | 83306212 | ID=Msa1083080-mRNA-1:exon:21847;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83306390 | 83306519 | 83306390 | ID=Msa1083080-mRNA-1:exon:21846;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83306743 | 83306825 | 83306743 | ID=Msa1083080-mRNA-1:exon:21845;Parent=Msa1083080-mRNA-1 |
| chr7_2 | exon | 83306901 | 83307178 | 83306901 | ID=Msa1083080-mRNA-1:exon:21844;Parent=Msa1083080-mRNA-1 |
| chr7_2 | five_prime_UTR | 83307127 | 83307178 | 83307127 | ID=Msa1083080-mRNA-1:five_prime_utr;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83306901 | 83307126 | 83306901 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83306743 | 83306825 | 83306743 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83306390 | 83306519 | 83306390 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83306212 | 83306285 | 83306212 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83305665 | 83305876 | 83305665 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83305488 | 83305548 | 83305488 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83305306 | 83305359 | 83305306 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83305081 | 83305158 | 83305081 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83304733 | 83304838 | 83304733 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83304476 | 83304621 | 83304476 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | CDS | 83304213 | 83304320 | 83304213 | ID=Msa1083080-mRNA-1:cds;Parent=Msa1083080-mRNA-1 |
| chr7_2 | three_prime_UTR | 83303866 | 83304212 | 83303866 | ID=Msa1083080-mRNA-1:three_prime_utr;Parent=Msa1083080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
