Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127960 | XP_003626125.1 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127960 | sp|Q9SFF6|PAE12_ARATH | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127960 | Q2HRU2 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117610 | Msa1127960 | 0.800739 | 1.251400e-48 | -8.615850e-47 |
| Msa0418970 | Msa1127960 | 0.805660 | 1.198942e-49 | -8.615850e-47 |
| Msa0430300 | Msa1127960 | 0.800801 | 1.215259e-48 | -8.615850e-47 |
| Msa0460550 | Msa1127960 | 0.809883 | 1.518454e-50 | -8.615850e-47 |
| Msa0481140 | Msa1127960 | 0.808397 | 3.160364e-50 | -8.615850e-47 |
| Msa1003740 | Msa1127960 | 0.816230 | 6.153809e-52 | -8.615850e-47 |
| Msa1003800 | Msa1127960 | 0.823759 | 1.164937e-53 | -8.615850e-47 |
| Msa1003930 | Msa1127960 | 0.816436 | 5.537102e-52 | -8.615850e-47 |
| Msa1040310 | Msa1127960 | 0.936353 | 1.989615e-97 | -8.615850e-47 |
| Msa1083080 | Msa1127960 | 0.966767 | 2.312984e-126 | -8.615850e-47 |
| Msa1127960 | Msa1217910 | 0.821686 | 3.539364e-53 | -8.615850e-47 |
| Msa1127960 | Msa1351780 | 0.943524 | 1.030909e-102 | -8.615850e-47 |
| Msa0483910 | Msa1127960 | 0.825621 | 4.241208e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127960 | MtrunA17_Chr7g0271231 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Msa1127960 | MtrunA17_Chr1g0193381 | 75.943 | 424 | 93 | 3 | 1 | 424 | 1 | 415 | 0.0 | 670 |
| Msa1127960 | MtrunA17_Chr7g0270931 | 71.662 | 367 | 104 | 0 | 59 | 425 | 49 | 415 | 0.0 | 592 |
| Msa1127960 | MtrunA17_Chr1g0193761 | 69.430 | 386 | 116 | 1 | 41 | 424 | 17 | 402 | 0.0 | 584 |
| Msa1127960 | MtrunA17_Chr4g0069571 | 65.023 | 426 | 130 | 2 | 3 | 425 | 12 | 421 | 0.0 | 582 |
| Msa1127960 | MtrunA17_Chr5g0408881 | 54.144 | 362 | 164 | 1 | 62 | 421 | 29 | 390 | 6.65e-151 | 435 |
| Msa1127960 | MtrunA17_Chr8g0369681 | 51.733 | 375 | 177 | 2 | 52 | 424 | 19 | 391 | 2.39e-148 | 427 |
| Msa1127960 | MtrunA17_Chr8g0369651 | 51.771 | 367 | 175 | 1 | 60 | 424 | 26 | 392 | 3.39e-146 | 421 |
| Msa1127960 | MtrunA17_Chr1g0203101 | 53.930 | 369 | 165 | 3 | 60 | 423 | 37 | 405 | 9.18e-145 | 418 |
| Msa1127960 | MtrunA17_Chr1g0203121 | 53.659 | 369 | 166 | 3 | 60 | 423 | 37 | 405 | 1.53e-142 | 412 |
| Msa1127960 | MtrunA17_Chr7g0238491 | 50.802 | 374 | 172 | 4 | 61 | 425 | 56 | 426 | 3.59e-139 | 405 |
| Msa1127960 | MtrunA17_Chr5g0418101 | 50.276 | 362 | 174 | 2 | 61 | 420 | 41 | 398 | 6.85e-137 | 398 |
| Msa1127960 | MtrunA17_Chr1g0163701 | 57.843 | 102 | 43 | 0 | 243 | 344 | 271 | 372 | 1.03e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127960 | AT3G05910.1 | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0.0 | 619 |
| Msa1127960 | AT5G26670.1 | 68.706 | 425 | 122 | 3 | 1 | 424 | 1 | 415 | 0.0 | 613 |
| Msa1127960 | AT1G57590.1 | 73.352 | 364 | 97 | 0 | 61 | 424 | 79 | 442 | 0.0 | 590 |
| Msa1127960 | AT3G62060.2 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 567 |
| Msa1127960 | AT3G62060.1 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 566 |
| Msa1127960 | AT2G46930.1 | 60.714 | 420 | 147 | 3 | 5 | 424 | 14 | 415 | 0.0 | 556 |
| Msa1127960 | AT5G26670.3 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1127960 | AT5G26670.2 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1127960 | AT5G26670.4 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| Msa1127960 | AT1G09550.1 | 59.128 | 367 | 146 | 2 | 40 | 403 | 17 | 382 | 3.98e-163 | 464 |
| Msa1127960 | AT4G19420.1 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| Msa1127960 | AT4G19420.2 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| Msa1127960 | AT5G23870.1 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| Msa1127960 | AT5G23870.4 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| Msa1127960 | AT5G23870.2 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 9.01e-150 | 432 |
| Msa1127960 | AT5G23870.3 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 1.14e-149 | 432 |
| Msa1127960 | AT4G19420.4 | 50.000 | 412 | 169 | 2 | 51 | 425 | 14 | 425 | 1.24e-149 | 432 |
| Msa1127960 | AT3G05910.2 | 64.725 | 309 | 103 | 2 | 8 | 316 | 4 | 306 | 4.93e-149 | 426 |
| Msa1127960 | AT3G09410.1 | 47.307 | 427 | 207 | 4 | 2 | 425 | 16 | 427 | 7.92e-144 | 417 |
| Msa1127960 | AT3G09405.1 | 45.606 | 421 | 202 | 4 | 2 | 419 | 13 | 409 | 4.65e-136 | 396 |
| Msa1127960 | AT5G45280.2 | 49.307 | 361 | 180 | 2 | 62 | 419 | 24 | 384 | 6.95e-135 | 393 |
| Msa1127960 | AT4G19410.1 | 49.030 | 361 | 181 | 2 | 62 | 419 | 24 | 384 | 1.70e-134 | 392 |
| Msa1127960 | AT4G19410.2 | 49.128 | 344 | 173 | 1 | 62 | 403 | 24 | 367 | 2.38e-127 | 378 |
| Msa1127960 | AT3G09410.3 | 51.796 | 334 | 158 | 1 | 61 | 391 | 60 | 393 | 1.66e-125 | 369 |
| Msa1127960 | AT5G45280.1 | 52.128 | 282 | 133 | 1 | 62 | 341 | 24 | 305 | 4.16e-109 | 326 |
| Msa1127960 | AT3G09405.2 | 49.175 | 303 | 149 | 2 | 120 | 419 | 2 | 302 | 3.31e-108 | 322 |
| Msa1127960 | AT4G19420.3 | 56.522 | 230 | 98 | 1 | 51 | 278 | 14 | 243 | 2.86e-90 | 276 |
Find 116 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATCACCAACTTGGTTTA+TGG | 0.071657 | 7_3:+79708531 | Msa1127960:CDS |
| AATTCAGAGGACAGCGAATT+TGG | 0.187648 | 7_3:+79709686 | Msa1127960:CDS |
| GCTAATCAGGCTCTTCTTTC+CGG | 0.191020 | 7_3:+79709751 | Msa1127960:CDS |
| ATACATCACCTTGCAGAAAT+TGG | 0.207626 | 7_3:-79710803 | None:intergenic |
| CAGACAATTCTCCGGTTATT+AGG | 0.224305 | 7_3:+79711045 | Msa1127960:CDS |
| ATCTTTATAATCAAGCTAAA+AGG | 0.236684 | 7_3:-79711576 | None:intergenic |
| AATGGAAGATTTGATGTTAA+AGG | 0.242008 | 7_3:+79709717 | Msa1127960:CDS |
| TGTGATGGTGGCTCATTTAC+TGG | 0.246928 | 7_3:+79709299 | Msa1127960:CDS |
| TACCATTTGCATCGTGGATA+TGG | 0.251407 | 7_3:+79708816 | Msa1127960:CDS |
| TTGGTTTATGGGTTTGAATT+AGG | 0.260228 | 7_3:+79708543 | Msa1127960:CDS |
| TATGGGTTTGAATTAGGATA+TGG | 0.270691 | 7_3:+79708549 | Msa1127960:CDS |
| TTGATTGTCATCGGTGAAAT+TGG | 0.280151 | 7_3:+79711432 | Msa1127960:three_prime_UTR |
| TTATCACCAACTTGGTTTAT+GGG | 0.298292 | 7_3:+79708532 | Msa1127960:CDS |
| TCAATACTGCTTATGATTCA+TGG | 0.299224 | 7_3:+79710444 | Msa1127960:CDS |
| TGAAGAACTCTTTCTGTTAG+AGG | 0.300195 | 7_3:+79708602 | Msa1127960:CDS |
| CAGTTGGCTTGTTAATTTAG+AGG | 0.330535 | 7_3:+79708851 | Msa1127960:CDS |
| AATTATAGGATTGATATATC+TGG | 0.336116 | 7_3:+79709994 | Msa1127960:intron |
| ATGGAAGATTTGATGTTAAA+GGG | 0.348581 | 7_3:+79709718 | Msa1127960:CDS |
| TCGCAGCTGCATTGTGGATA+AGG | 0.349524 | 7_3:-79708686 | None:intergenic |
| CACTTCACTTTAGTAGTCCT+TGG | 0.363666 | 7_3:-79709832 | None:intergenic |
| TATGATGTTAAGGAACAAAA+AGG | 0.371526 | 7_3:-79711491 | None:intergenic |
| CGCAGCTGCATTGTGGATAA+GGG | 0.373988 | 7_3:-79708685 | None:intergenic |
| CCTTGCAGAAATTGGATTTG+TGG | 0.382065 | 7_3:-79710795 | None:intergenic |
| TTCACCTTGTTCCTAATAAC+CGG | 0.384001 | 7_3:-79711056 | None:intergenic |
| TGATAATACATGTCACCATT+TGG | 0.393033 | 7_3:+79711303 | Msa1127960:CDS |
| CAGCAGATCCCCATGGCTAT+TGG | 0.396660 | 7_3:+79710736 | Msa1127960:CDS |
| CTTCTTTCCGGATGTTCAGC+GGG | 0.402249 | 7_3:+79709763 | Msa1127960:CDS |
| ATTCAGAGGACAGCGAATTT+GGG | 0.404061 | 7_3:+79709687 | Msa1127960:CDS |
| CAACACCACTGTACATATTC+CGG | 0.405411 | 7_3:-79710029 | None:intergenic |
| TTACTAAGTATTCCTGTGAA+TGG | 0.407702 | 7_3:-79709117 | None:intergenic |
| ATGTATCTTGCCTCTCGGTT+TGG | 0.417685 | 7_3:-79711016 | None:intergenic |
| GCATCCTTTCTTGAGGGTAA+TGG | 0.436523 | 7_3:+79708639 | Msa1127960:CDS |
| TAGGTAATTGCTTTAGCTGT+TGG | 0.437321 | 7_3:+79711226 | Msa1127960:intron |
| GCTGCATACTTATGATGTTA+AGG | 0.437924 | 7_3:-79711501 | None:intergenic |
| TTGGTTTCTTGCAGTGTGCT+TGG | 0.438110 | 7_3:+79708776 | Msa1127960:intron |
| AATATGTACAGTGGTGTTGT+AGG | 0.448233 | 7_3:+79710033 | Msa1127960:CDS |
| TAGGCCACCCGCTGAACATC+CGG | 0.448568 | 7_3:-79709770 | None:intergenic |
| GCGAATTTGGGCAGCTGCAA+TGG | 0.455500 | 7_3:+79709699 | Msa1127960:CDS |
| TACTGGAGATGGTGAAGATC+AGG | 0.456973 | 7_3:+79709316 | Msa1127960:CDS |
| TTTCTTGCAGTGTGCTTGGA+TGG | 0.462046 | 7_3:+79708780 | Msa1127960:intron |
| TTGCTTTAGCTGTTGGAGAC+TGG | 0.466598 | 7_3:+79711233 | Msa1127960:CDS |
| GTCTCTTGAATACAGGGTTC+AGG | 0.466892 | 7_3:+79710913 | Msa1127960:intron |
| AATAAACCTGAAGAAAATCC+AGG | 0.477981 | 7_3:+79709138 | Msa1127960:CDS |
| GTGAAGTGTCTTAGCGATGC+AGG | 0.481043 | 7_3:+79709847 | Msa1127960:CDS |
| ATTTCCATTACCCTCAAGAA+AGG | 0.487996 | 7_3:-79708643 | None:intergenic |
| TAACTTGATTTGATTGTCAT+CGG | 0.489011 | 7_3:+79711423 | Msa1127960:three_prime_UTR |
| TTCTCAAGATCAAACAAGAA+TGG | 0.489491 | 7_3:+79710963 | Msa1127960:CDS |
| TCTTTATAATCAAGCTAAAA+GGG | 0.494899 | 7_3:-79711575 | None:intergenic |
| TTGCATCGTGGATATGGATC+AGG | 0.495342 | 7_3:+79708822 | Msa1127960:CDS |
| AATTTCGAGGTCTCTTTCCA+AGG | 0.497114 | 7_3:+79709815 | Msa1127960:CDS |
| ATCATCATTATACATGGAAA+AGG | 0.501178 | 7_3:+79709089 | Msa1127960:CDS |
| TGGCTCAACTGAAAACCAAA+TGG | 0.503838 | 7_3:-79711318 | None:intergenic |
| TGCATTCATGCCAATAGCCA+TGG | 0.510756 | 7_3:-79710746 | None:intergenic |
| ATCCATATCCACGATGCAAA+TGG | 0.517887 | 7_3:-79708818 | None:intergenic |
| CATGCAGCATCCTTTCTTGA+GGG | 0.518276 | 7_3:+79708633 | Msa1127960:CDS |
| ATACACTGTGATGAATTTCG+AGG | 0.519543 | 7_3:+79709802 | Msa1127960:CDS |
| ACCCAGAAAAGTTTAGCCAT+TGG | 0.528435 | 7_3:-79708489 | None:intergenic |
| TAGCCATGGGGATCTGCTGA+TGG | 0.530490 | 7_3:-79710732 | None:intergenic |
| TCGTACATGATCATCATCAA+TGG | 0.532122 | 7_3:+79711345 | Msa1127960:three_prime_UTR |
| AGGACTTGTTATCACCAACT+TGG | 0.533797 | 7_3:+79708524 | Msa1127960:CDS |
| AATGCAGCTGCGAAAGGAGC+AGG | 0.535291 | 7_3:+79708696 | Msa1127960:CDS |
| CTCCTTTCGCAGCTGCATTG+TGG | 0.536686 | 7_3:-79708692 | None:intergenic |
| TGATGATCATGTACGAACTT+TGG | 0.542070 | 7_3:-79711338 | None:intergenic |
| CCACGATGCAAATGGTAACC+AGG | 0.545374 | 7_3:-79708810 | None:intergenic |
| GCATTCATGCCAATAGCCAT+GGG | 0.548266 | 7_3:-79710745 | None:intergenic |
| GTAAAGCTTCGTTATTGTGA+TGG | 0.550885 | 7_3:+79709284 | Msa1127960:CDS |
| CAGTGGTGTTGTAGGGATGC+AGG | 0.553790 | 7_3:+79710041 | Msa1127960:CDS |
| TGCTTGGATGGAACATTACC+TGG | 0.558834 | 7_3:+79708792 | Msa1127960:CDS |
| TTCAAACCCATAAACCAAGT+TGG | 0.559248 | 7_3:-79708538 | None:intergenic |
| AAACCGAGAGGCAAGATACA+TGG | 0.565165 | 7_3:+79711018 | Msa1127960:CDS |
| GCGTGGATCATCATTATACA+TGG | 0.565339 | 7_3:+79709083 | Msa1127960:CDS |
| TACTGCTTATGATTCATGGC+AGG | 0.565480 | 7_3:+79710448 | Msa1127960:CDS |
| TCTTCTTTCCGGATGTTCAG+CGG | 0.565522 | 7_3:+79709762 | Msa1127960:CDS |
| GTGGCCTTGTGCATTTAGCA+TGG | 0.567737 | 7_3:-79710776 | None:intergenic |
| ATCCACAATGCAGCTGCGAA+AGG | 0.569230 | 7_3:+79708690 | Msa1127960:CDS |
| GTGTTTATCGCAAGAAAACA+CGG | 0.570483 | 7_3:+79709061 | Msa1127960:CDS |
| AGAAACATTGTCATCGCCAA+TGG | 0.576057 | 7_3:+79708473 | Msa1127960:exon |
| ACATGCAGCATCCTTTCTTG+AGG | 0.576567 | 7_3:+79708632 | Msa1127960:CDS |
| CACAGTGTATAATAGTAGCT+AGG | 0.579094 | 7_3:-79709789 | None:intergenic |
| GGTGGCTCATTTACTGGAGA+TGG | 0.581728 | 7_3:+79709305 | Msa1127960:CDS |
| TCTAACTGTCATCAGGGAGG+TGG | 0.582270 | 7_3:+79709015 | Msa1127960:intron |
| ACACTGGCAATCAAATTCTG+AGG | 0.583315 | 7_3:-79710401 | None:intergenic |
| ATGATTATGATTACCGAGGT+AGG | 0.584023 | 7_3:-79710236 | None:intergenic |
| CATGTATTATCACAAGGGTA+AGG | 0.587582 | 7_3:-79711292 | None:intergenic |
| ATGGATCAGGAGCAAACAGT+TGG | 0.589134 | 7_3:+79708835 | Msa1127960:CDS |
| TTCACTATTTGGGAATGCTG+AGG | 0.589472 | 7_3:+79711463 | Msa1127960:three_prime_UTR |
| CACTGGCAATCAAATTCTGA+GGG | 0.591267 | 7_3:-79710400 | None:intergenic |
| CTTTCCGGATGTTCAGCGGG+TGG | 0.596559 | 7_3:+79709766 | Msa1127960:CDS |
| GAAAAGGAGATACCATTCAC+AGG | 0.596897 | 7_3:+79709105 | Msa1127960:CDS |
| AAACCATGTATCTTGCCTCT+CGG | 0.596928 | 7_3:-79711021 | None:intergenic |
| AAGCTTCGTTATTGTGATGG+TGG | 0.600562 | 7_3:+79709287 | Msa1127960:CDS |
| CATCATAAGTATGCAGCCGT+AGG | 0.608287 | 7_3:+79711507 | Msa1127960:three_prime_UTR |
| TGGTGACATGTATTATCACA+AGG | 0.608610 | 7_3:-79711298 | None:intergenic |
| TGAAGTGTCTTAGCGATGCA+GGG | 0.608865 | 7_3:+79709848 | Msa1127960:CDS |
| CCTGGTTACCATTTGCATCG+TGG | 0.609738 | 7_3:+79708810 | Msa1127960:CDS |
| TGATTACCGAGGTAGGATCA+AGG | 0.612410 | 7_3:-79710229 | None:intergenic |
| ATATGTACAGTGGTGTTGTA+GGG | 0.613917 | 7_3:+79710034 | Msa1127960:CDS |
| CCATGGGGATCTGCTGATGG+AGG | 0.617825 | 7_3:-79710729 | None:intergenic |
| ACTGTCATCAGGGAGGTGGA+TGG | 0.626588 | 7_3:+79709019 | Msa1127960:intron |
| AGGGTGAGTCCTACGAGCAG+AGG | 0.626989 | 7_3:-79708666 | None:intergenic |
| TTCTCCGGTTATTAGGAACA+AGG | 0.636482 | 7_3:+79711052 | Msa1127960:CDS |
| CACCACTGTACATATTCCGG+AGG | 0.638914 | 7_3:-79710026 | None:intergenic |
| AATGGAAATCCTCTGCTCGT+AGG | 0.640827 | 7_3:+79708657 | Msa1127960:CDS |
| CCTCCATCAGCAGATCCCCA+TGG | 0.647413 | 7_3:+79710729 | Msa1127960:CDS |
| CCACAAATCCAATTTCTGCA+AGG | 0.649408 | 7_3:+79710795 | Msa1127960:CDS |
| TACATGATCATCATCAATGG+AGG | 0.650804 | 7_3:+79711348 | Msa1127960:three_prime_UTR |
| TAATCACCTTGATCCTACCT+CGG | 0.661838 | 7_3:+79710223 | Msa1127960:CDS |
| GAAGCAGAACTGCAATTCAG+AGG | 0.664323 | 7_3:+79709673 | Msa1127960:CDS |
| ACCACTGTACATATTCCGGA+GGG | 0.680732 | 7_3:-79710025 | None:intergenic |
| TATCGCAAGAAAACACGGCG+TGG | 0.683797 | 7_3:+79709066 | Msa1127960:CDS |
| AGGTGATTAGTACAAATCTG+TGG | 0.684849 | 7_3:-79710209 | None:intergenic |
| TCGCTCACTGCCAAACCGAG+AGG | 0.692246 | 7_3:+79711006 | Msa1127960:CDS |
| TAAACCATGCTAAATGCACA+AGG | 0.692567 | 7_3:+79710772 | Msa1127960:CDS |
| GGTGACATGTATTATCACAA+GGG | 0.699950 | 7_3:-79711297 | None:intergenic |
| ACCCTCCGGAATATGTACAG+TGG | 0.725020 | 7_3:+79710024 | Msa1127960:CDS |
| CATTCATGCCAATAGCCATG+GGG | 0.744235 | 7_3:-79710744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGAAATAATTAAAGTTTT+AGG | + | chr7_3:79708989-79709008 | Msa1127960:intron | 10.0% |
| !!! | ATATGTAAAATTTGATATTT+TGG | + | chr7_3:79709428-79709447 | Msa1127960:intron | 10.0% |
| !!! | TATGTAAAATTTGATATTTT+GGG | + | chr7_3:79709429-79709448 | Msa1127960:intron | 10.0% |
| !!! | ATTAATTTTTTTTGTAATGA+TGG | - | chr7_3:79709941-79709960 | None:intergenic | 10.0% |
| !! | TAACAAAAAATAATGAAAAA+GGG | + | chr7_3:79711611-79711630 | Msa1127960:three_prime_UTR | 10.0% |
| !! | CAAAAATATTTAATATTGAG+AGG | - | chr7_3:79708759-79708778 | None:intergenic | 15.0% |
| !!! | CTCTCAATATTAAATATTTT+TGG | + | chr7_3:79708757-79708776 | Msa1127960:intron | 15.0% |
| !!! | TTGCTTTTTTAATTTGTTAT+AGG | + | chr7_3:79709199-79709218 | Msa1127960:intron | 15.0% |
| !! | ATGTAAAAATTAATTACACT+AGG | + | chr7_3:79709348-79709367 | Msa1127960:intron | 15.0% |
| !! | ATAAACTATTTGTAATAAGT+TGG | - | chr7_3:79710092-79710111 | None:intergenic | 15.0% |
| !! | AAATAGTTTATATTCTTTCA+TGG | + | chr7_3:79710101-79710120 | Msa1127960:intron | 15.0% |
| !! | ACATTTAATCATTTCATTAT+CGG | - | chr7_3:79710597-79710616 | None:intergenic | 15.0% |
| !! | AATGAAATGATTAAATGTAT+CGG | + | chr7_3:79710599-79710618 | Msa1127960:intron | 15.0% |
| !! | TTATTACTATATTATTCAGT+TGG | + | chr7_3:79710875-79710894 | Msa1127960:intron | 15.0% |
| !!! | TTCATTATTTTTTGTTACTT+TGG | - | chr7_3:79711608-79711627 | None:intergenic | 15.0% |
| !! | GTAACAAAAAATAATGAAAA+AGG | + | chr7_3:79711610-79711629 | Msa1127960:three_prime_UTR | 15.0% |
| !! | AACAAAAAATAATGAAAAAG+GGG | + | chr7_3:79711612-79711631 | Msa1127960:three_prime_UTR | 15.0% |
| !!! | GGTAAGTTTTTTTTTTTTTT+TGG | + | chr7_3:79711634-79711653 | Msa1127960:three_prime_UTR | 15.0% |
| !! | ATATTTAATATTGAGAGGAA+AGG | - | chr7_3:79708754-79708773 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTCTTTTCTTT+TGG | + | chr7_3:79708903-79708922 | Msa1127960:intron | 20.0% |
| !! | AATTGAATGAAAATTAAACC+TGG | - | chr7_3:79709159-79709178 | None:intergenic | 20.0% |
| !!! | AATTTGCAGATTTTTTCAAT+TGG | + | chr7_3:79709255-79709274 | Msa1127960:intron | 20.0% |
| !!! | AGTTAACTTTTATGCAAAAA+AGG | - | chr7_3:79709493-79709512 | None:intergenic | 20.0% |
| !! | TTTGTTTGCATTGAAATTAT+AGG | + | chr7_3:79709980-79709999 | Msa1127960:intron | 20.0% |
| !! | AATTATAGGATTGATATATC+TGG | + | chr7_3:79709994-79710013 | Msa1127960:intron | 20.0% |
| !! | AAATAATAGTATATGAGATG+TGG | + | chr7_3:79710524-79710543 | Msa1127960:intron | 20.0% |
| !! | TCTTTATAATCAAGCTAAAA+GGG | - | chr7_3:79711578-79711597 | None:intergenic | 20.0% |
| !! | ATCTTTATAATCAAGCTAAA+AGG | - | chr7_3:79711579-79711598 | None:intergenic | 20.0% |
| !! | ACAAAAAATAATGAAAAAGG+GGG | + | chr7_3:79711613-79711632 | Msa1127960:three_prime_UTR | 20.0% |
| !!! | TAGAGGTATTTCTTCTTATT+TGG | + | chr7_3:79708868-79708887 | Msa1127960:intron | 25.0% |
| !! | ATTTTCAGTTAATTATGCCA+TGG | - | chr7_3:79708967-79708986 | None:intergenic | 25.0% |
| ! | ATCATCATTATACATGGAAA+AGG | + | chr7_3:79709089-79709108 | Msa1127960:CDS | 25.0% |
| !! | TTTTATGCAAAAAAGGATAC+AGG | - | chr7_3:79709486-79709505 | None:intergenic | 25.0% |
| ! | AATGGAAGATTTGATGTTAA+AGG | + | chr7_3:79709717-79709736 | Msa1127960:CDS | 25.0% |
| ! | ATGGAAGATTTGATGTTAAA+GGG | + | chr7_3:79709718-79709737 | Msa1127960:CDS | 25.0% |
| !! | TTTTGTAATGATGGTAGAAA+TGG | - | chr7_3:79709932-79709951 | None:intergenic | 25.0% |
| ! | ATTATTTGTTTGATCACTGT+AGG | + | chr7_3:79710169-79710188 | Msa1127960:intron | 25.0% |
| !!! | TTCAGTTTTGTCAAATAGTT+AGG | + | chr7_3:79710270-79710289 | Msa1127960:intron | 25.0% |
| ! | TGAAAAAGGAGTAATAAAAC+AGG | - | chr7_3:79710371-79710390 | None:intergenic | 25.0% |
| ! | AATATCCTAAGTTTGTCAAT+TGG | + | chr7_3:79710473-79710492 | Msa1127960:intron | 25.0% |
| !! | TACATACATTGACTAAATGT+AGG | + | chr7_3:79711207-79711226 | Msa1127960:intron | 25.0% |
| !! | TAACTTGATTTGATTGTCAT+CGG | + | chr7_3:79711423-79711442 | Msa1127960:three_prime_UTR | 25.0% |
| ! | TATGATGTTAAGGAACAAAA+AGG | - | chr7_3:79711494-79711513 | None:intergenic | 25.0% |
| !! | TAGATTTTAGATCAATCCTA+CGG | - | chr7_3:79711526-79711545 | None:intergenic | 25.0% |
| TTATCACCAACTTGGTTTAT+GGG | + | chr7_3:79708532-79708551 | Msa1127960:CDS | 30.0% | |
| TTGGTTTATGGGTTTGAATT+AGG | + | chr7_3:79708543-79708562 | Msa1127960:CDS | 30.0% | |
| TATGGGTTTGAATTAGGATA+TGG | + | chr7_3:79708549-79708568 | Msa1127960:CDS | 30.0% | |
| AGGTTGTATTGTTTGTTTGT+AGG | - | chr7_3:79708727-79708746 | None:intergenic | 30.0% | |
| TTACTAAGTATTCCTGTGAA+TGG | - | chr7_3:79709120-79709139 | None:intergenic | 30.0% | |
| AATAAACCTGAAGAAAATCC+AGG | + | chr7_3:79709138-79709157 | Msa1127960:CDS | 30.0% | |
| ! | ATTAAACCTGGATTTTCTTC+AGG | - | chr7_3:79709147-79709166 | None:intergenic | 30.0% |
| ! | CTTTATTTACGTATGTTGTC+TGG | + | chr7_3:79709642-79709661 | Msa1127960:intron | 30.0% |
| ! | CATGGCTATGTTATTTAACA+TGG | + | chr7_3:79710119-79710138 | Msa1127960:intron | 30.0% |
| ACATGGTTGTAACATTTGTA+AGG | + | chr7_3:79710136-79710155 | Msa1127960:intron | 30.0% | |
| ATCAATGATTATGATTACCG+AGG | - | chr7_3:79710243-79710262 | None:intergenic | 30.0% | |
| TCAATACTGCTTATGATTCA+TGG | + | chr7_3:79710444-79710463 | Msa1127960:CDS | 30.0% | |
| AACATTGGACACAATACTAA+CGG | + | chr7_3:79710557-79710576 | Msa1127960:intron | 30.0% | |
| TTCTCAAGATCAAACAAGAA+TGG | + | chr7_3:79710963-79710982 | Msa1127960:CDS | 30.0% | |
| TGATAATACATGTCACCATT+TGG | + | chr7_3:79711303-79711322 | Msa1127960:CDS | 30.0% | |
| !!! | TGGAAGTGTTTTTCACTATT+TGG | + | chr7_3:79711452-79711471 | Msa1127960:three_prime_UTR | 30.0% |
| !!! | GGAAGTGTTTTTCACTATTT+GGG | + | chr7_3:79711453-79711472 | Msa1127960:three_prime_UTR | 30.0% |
| ! | TTCTGGGTTTTCATTGCAAT+AGG | + | chr7_3:79708504-79708523 | Msa1127960:CDS | 35.0% |
| GTTATCACCAACTTGGTTTA+TGG | + | chr7_3:79708531-79708550 | Msa1127960:CDS | 35.0% | |
| TTCAAACCCATAAACCAAGT+TGG | - | chr7_3:79708541-79708560 | None:intergenic | 35.0% | |
| TGAAGAACTCTTTCTGTTAG+AGG | + | chr7_3:79708602-79708621 | Msa1127960:CDS | 35.0% | |
| ATTTCCATTACCCTCAAGAA+AGG | - | chr7_3:79708646-79708665 | None:intergenic | 35.0% | |
| ATATTGAGAGGAAAGGAGAA+AGG | - | chr7_3:79708747-79708766 | None:intergenic | 35.0% | |
| !! | CAGTTGGCTTGTTAATTTAG+AGG | + | chr7_3:79708851-79708870 | Msa1127960:CDS | 35.0% |
| TGTAACATGCATATATGCCA+TGG | + | chr7_3:79708947-79708966 | Msa1127960:intron | 35.0% | |
| TAGGATTTCTAACTGTCATC+AGG | + | chr7_3:79709008-79709027 | Msa1127960:intron | 35.0% | |
| AGGATTTCTAACTGTCATCA+GGG | + | chr7_3:79709009-79709028 | Msa1127960:intron | 35.0% | |
| GTGTTTATCGCAAGAAAACA+CGG | + | chr7_3:79709061-79709080 | Msa1127960:CDS | 35.0% | |
| ATGAGCAACAATAACATGAG+AGG | - | chr7_3:79709231-79709250 | None:intergenic | 35.0% | |
| GTAAAGCTTCGTTATTGTGA+TGG | + | chr7_3:79709284-79709303 | Msa1127960:CDS | 35.0% | |
| TAGGTAACTGACTAACAAAC+TGG | + | chr7_3:79709367-79709386 | Msa1127960:intron | 35.0% | |
| CAAAAAAGGATACAGGTCTA+CGG | - | chr7_3:79709479-79709498 | None:intergenic | 35.0% | |
| CAAGTCATGTATCTCAACAA+TGG | - | chr7_3:79709578-79709597 | None:intergenic | 35.0% | |
| CACAGTGTATAATAGTAGCT+AGG | - | chr7_3:79709792-79709811 | None:intergenic | 35.0% | |
| ATACACTGTGATGAATTTCG+AGG | + | chr7_3:79709802-79709821 | Msa1127960:CDS | 35.0% | |
| AATGATGGTAGAAATGGCAT+TGG | - | chr7_3:79709926-79709945 | None:intergenic | 35.0% | |
| !! | AATATGTACAGTGGTGTTGT+AGG | + | chr7_3:79710033-79710052 | Msa1127960:CDS | 35.0% |
| !! | ATATGTACAGTGGTGTTGTA+GGG | + | chr7_3:79710034-79710053 | Msa1127960:CDS | 35.0% |
| TGGTATTCTTGTGATTAGTG+TGG | - | chr7_3:79710072-79710091 | None:intergenic | 35.0% | |
| AGGTGATTAGTACAAATCTG+TGG | - | chr7_3:79710212-79710231 | None:intergenic | 35.0% | |
| ATGATTATGATTACCGAGGT+AGG | - | chr7_3:79710239-79710258 | None:intergenic | 35.0% | |
| AAAAAGTGGTGTTCTAACAC+TGG | - | chr7_3:79710420-79710439 | None:intergenic | 35.0% | |
| ! | GCAGTATTGAGAAGAAAAAG+TGG | - | chr7_3:79710434-79710453 | None:intergenic | 35.0% |
| GACTACCAATTGACAAACTT+AGG | - | chr7_3:79710481-79710500 | None:intergenic | 35.0% | |
| CTTGACTGAATCTGATAACA+AGG | - | chr7_3:79710702-79710721 | None:intergenic | 35.0% | |
| TAAACCATGCTAAATGCACA+AGG | + | chr7_3:79710772-79710791 | Msa1127960:CDS | 35.0% | |
| ATACATCACCTTGCAGAAAT+TGG | - | chr7_3:79710806-79710825 | None:intergenic | 35.0% | |
| TTAGTACCATTCATTGCAAG+TGG | + | chr7_3:79710831-79710850 | Msa1127960:intron | 35.0% | |
| ! | TTTTCTCCACTTGCAATGAA+TGG | - | chr7_3:79710840-79710859 | None:intergenic | 35.0% |
| ! | ATGGTTTTCAGACAATTCTC+CGG | + | chr7_3:79711037-79711056 | Msa1127960:CDS | 35.0% |
| TTCACCTTGTTCCTAATAAC+CGG | - | chr7_3:79711059-79711078 | None:intergenic | 35.0% | |
| TAGGTAATTGCTTTAGCTGT+TGG | + | chr7_3:79711226-79711245 | Msa1127960:intron | 35.0% | |
| !!! | TTTTGATCGAGAAGGTGTTA+AGG | + | chr7_3:79711258-79711277 | Msa1127960:CDS | 35.0% |
| CATGTATTATCACAAGGGTA+AGG | - | chr7_3:79711295-79711314 | None:intergenic | 35.0% | |
| GGTGACATGTATTATCACAA+GGG | - | chr7_3:79711300-79711319 | None:intergenic | 35.0% | |
| TGGTGACATGTATTATCACA+AGG | - | chr7_3:79711301-79711320 | None:intergenic | 35.0% | |
| TGATGATCATGTACGAACTT+TGG | - | chr7_3:79711341-79711360 | None:intergenic | 35.0% | |
| TCGTACATGATCATCATCAA+TGG | + | chr7_3:79711345-79711364 | Msa1127960:three_prime_UTR | 35.0% | |
| TACATGATCATCATCAATGG+AGG | + | chr7_3:79711348-79711367 | Msa1127960:three_prime_UTR | 35.0% | |
| TTGATTGTCATCGGTGAAAT+TGG | + | chr7_3:79711432-79711451 | Msa1127960:three_prime_UTR | 35.0% | |
| GCTGCATACTTATGATGTTA+AGG | - | chr7_3:79711504-79711523 | None:intergenic | 35.0% | |
| !! | TTTTTGGTACATTGACGCAA+TGG | + | chr7_3:79711650-79711669 | Msa1127960:three_prime_UTR | 35.0% |
| AGAAACATTGTCATCGCCAA+TGG | + | chr7_3:79708473-79708492 | Msa1127960:exon | 40.0% | |
| ! | GCCAATGGCTAAACTTTTCT+GGG | + | chr7_3:79708488-79708507 | Msa1127960:exon | 40.0% |
| ACCCAGAAAAGTTTAGCCAT+TGG | - | chr7_3:79708492-79708511 | None:intergenic | 40.0% | |
| !! | AGGACTTGTTATCACCAACT+TGG | + | chr7_3:79708524-79708543 | Msa1127960:CDS | 40.0% |
| TACCATTTGCATCGTGGATA+TGG | + | chr7_3:79708816-79708835 | Msa1127960:CDS | 40.0% | |
| ATCCATATCCACGATGCAAA+TGG | - | chr7_3:79708821-79708840 | None:intergenic | 40.0% | |
| ATTTCTAACTGTCATCAGGG+AGG | + | chr7_3:79709012-79709031 | Msa1127960:intron | 40.0% | |
| GCGTGGATCATCATTATACA+TGG | + | chr7_3:79709083-79709102 | Msa1127960:CDS | 40.0% | |
| GAAAAGGAGATACCATTCAC+AGG | + | chr7_3:79709105-79709124 | Msa1127960:CDS | 40.0% | |
| AAGCTTCGTTATTGTGATGG+TGG | + | chr7_3:79709287-79709306 | Msa1127960:CDS | 40.0% | |
| AGCAGAAACTTGTAAGAGCA+AGG | + | chr7_3:79709531-79709550 | Msa1127960:intron | 40.0% | |
| AATTCAGAGGACAGCGAATT+TGG | + | chr7_3:79709686-79709705 | Msa1127960:CDS | 40.0% | |
| ATTCAGAGGACAGCGAATTT+GGG | + | chr7_3:79709687-79709706 | Msa1127960:CDS | 40.0% | |
| ! | GGGAATGCATTTTGCTAATC+AGG | + | chr7_3:79709738-79709757 | Msa1127960:CDS | 40.0% |
| AATTTCGAGGTCTCTTTCCA+AGG | + | chr7_3:79709815-79709834 | Msa1127960:CDS | 40.0% | |
| CACTTCACTTTAGTAGTCCT+TGG | - | chr7_3:79709835-79709854 | None:intergenic | 40.0% | |
| CAACACCACTGTACATATTC+CGG | - | chr7_3:79710032-79710051 | None:intergenic | 40.0% | |
| TAATCACCTTGATCCTACCT+CGG | + | chr7_3:79710223-79710242 | Msa1127960:CDS | 40.0% | |
| GAGGGAAGAAACACTGAAAA+AGG | - | chr7_3:79710385-79710404 | None:intergenic | 40.0% | |
| CACTGGCAATCAAATTCTGA+GGG | - | chr7_3:79710403-79710422 | None:intergenic | 40.0% | |
| ACACTGGCAATCAAATTCTG+AGG | - | chr7_3:79710404-79710423 | None:intergenic | 40.0% | |
| TACTGCTTATGATTCATGGC+AGG | + | chr7_3:79710448-79710467 | Msa1127960:CDS | 40.0% | |
| TGTGGCAGTAACACAAACAT+TGG | + | chr7_3:79710542-79710561 | Msa1127960:intron | 40.0% | |
| GACTGAATCTGATAACAAGG+AGG | - | chr7_3:79710699-79710718 | None:intergenic | 40.0% | |
| CCTTGCAGAAATTGGATTTG+TGG | - | chr7_3:79710798-79710817 | None:intergenic | 40.0% | |
| CCACAAATCCAATTTCTGCA+AGG | + | chr7_3:79710795-79710814 | Msa1127960:CDS | 40.0% | |
| TGAACCCTGTATTCAAGAGA+CGG | - | chr7_3:79710914-79710933 | None:intergenic | 40.0% | |
| AAACCATGTATCTTGCCTCT+CGG | - | chr7_3:79711024-79711043 | None:intergenic | 40.0% | |
| CAGACAATTCTCCGGTTATT+AGG | + | chr7_3:79711045-79711064 | Msa1127960:CDS | 40.0% | |
| TTCTCCGGTTATTAGGAACA+AGG | + | chr7_3:79711052-79711071 | Msa1127960:CDS | 40.0% | |
| !!! | GACTGGTATTTTGATCGAGA+AGG | + | chr7_3:79711250-79711269 | Msa1127960:CDS | 40.0% |
| TGGCTCAACTGAAAACCAAA+TGG | - | chr7_3:79711321-79711340 | None:intergenic | 40.0% | |
| TTCACTATTTGGGAATGCTG+AGG | + | chr7_3:79711463-79711482 | Msa1127960:three_prime_UTR | 40.0% | |
| ! | CGCCAATGGCTAAACTTTTC+TGG | + | chr7_3:79708487-79708506 | Msa1127960:exon | 45.0% |
| ACATGCAGCATCCTTTCTTG+AGG | + | chr7_3:79708632-79708651 | Msa1127960:CDS | 45.0% | |
| CATGCAGCATCCTTTCTTGA+GGG | + | chr7_3:79708633-79708652 | Msa1127960:CDS | 45.0% | |
| GCATCCTTTCTTGAGGGTAA+TGG | + | chr7_3:79708639-79708658 | Msa1127960:CDS | 45.0% | |
| AATGGAAATCCTCTGCTCGT+AGG | + | chr7_3:79708657-79708676 | Msa1127960:CDS | 45.0% | |
| TTGGTTTCTTGCAGTGTGCT+TGG | + | chr7_3:79708776-79708795 | Msa1127960:intron | 45.0% | |
| TTTCTTGCAGTGTGCTTGGA+TGG | + | chr7_3:79708780-79708799 | Msa1127960:intron | 45.0% | |
| TGCTTGGATGGAACATTACC+TGG | + | chr7_3:79708792-79708811 | Msa1127960:CDS | 45.0% | |
| TTGCATCGTGGATATGGATC+AGG | + | chr7_3:79708822-79708841 | Msa1127960:CDS | 45.0% | |
| ATGGATCAGGAGCAAACAGT+TGG | + | chr7_3:79708835-79708854 | Msa1127960:CDS | 45.0% | |
| !! | TGTGATGGTGGCTCATTTAC+TGG | + | chr7_3:79709299-79709318 | Msa1127960:CDS | 45.0% |
| TACTGGAGATGGTGAAGATC+AGG | + | chr7_3:79709316-79709335 | Msa1127960:CDS | 45.0% | |
| GAAGCAGAACTGCAATTCAG+AGG | + | chr7_3:79709673-79709692 | Msa1127960:CDS | 45.0% | |
| GCTAATCAGGCTCTTCTTTC+CGG | + | chr7_3:79709751-79709770 | Msa1127960:CDS | 45.0% | |
| TCTTCTTTCCGGATGTTCAG+CGG | + | chr7_3:79709762-79709781 | Msa1127960:CDS | 45.0% | |
| ! | TGAAGTGTCTTAGCGATGCA+GGG | + | chr7_3:79709848-79709867 | Msa1127960:CDS | 45.0% |
| ACCACTGTACATATTCCGGA+GGG | - | chr7_3:79710028-79710047 | None:intergenic | 45.0% | |
| TGATTACCGAGGTAGGATCA+AGG | - | chr7_3:79710232-79710251 | None:intergenic | 45.0% | |
| AGTGTCGTGTCAATGCTACA+TGG | + | chr7_3:79710630-79710649 | Msa1127960:intron | 45.0% | |
| CATTCATGCCAATAGCCATG+GGG | - | chr7_3:79710747-79710766 | None:intergenic | 45.0% | |
| GCATTCATGCCAATAGCCAT+GGG | - | chr7_3:79710748-79710767 | None:intergenic | 45.0% | |
| TGCATTCATGCCAATAGCCA+TGG | - | chr7_3:79710749-79710768 | None:intergenic | 45.0% | |
| TTTCGCCGTCTCTTGAATAC+AGG | + | chr7_3:79710906-79710925 | Msa1127960:intron | 45.0% | |
| TTCGCCGTCTCTTGAATACA+GGG | + | chr7_3:79710907-79710926 | Msa1127960:intron | 45.0% | |
| GTCTCTTGAATACAGGGTTC+AGG | + | chr7_3:79710913-79710932 | Msa1127960:intron | 45.0% | |
| ATGTATCTTGCCTCTCGGTT+TGG | - | chr7_3:79711019-79711038 | None:intergenic | 45.0% | |
| AAACCGAGAGGCAAGATACA+TGG | + | chr7_3:79711018-79711037 | Msa1127960:CDS | 45.0% | |
| TTGCTTTAGCTGTTGGAGAC+TGG | + | chr7_3:79711233-79711252 | Msa1127960:CDS | 45.0% | |
| CATCATAAGTATGCAGCCGT+AGG | + | chr7_3:79711507-79711526 | Msa1127960:three_prime_UTR | 45.0% | |
| CGCAGCTGCATTGTGGATAA+GGG | - | chr7_3:79708688-79708707 | None:intergenic | 50.0% | |
| TCGCAGCTGCATTGTGGATA+AGG | - | chr7_3:79708689-79708708 | None:intergenic | 50.0% | |
| ATCCACAATGCAGCTGCGAA+AGG | + | chr7_3:79708690-79708709 | Msa1127960:CDS | 50.0% | |
| CCACGATGCAAATGGTAACC+AGG | - | chr7_3:79708813-79708832 | None:intergenic | 50.0% | |
| CCTGGTTACCATTTGCATCG+TGG | + | chr7_3:79708810-79708829 | Msa1127960:CDS | 50.0% | |
| TCTAACTGTCATCAGGGAGG+TGG | + | chr7_3:79709015-79709034 | Msa1127960:intron | 50.0% | |
| TATCGCAAGAAAACACGGCG+TGG | + | chr7_3:79709066-79709085 | Msa1127960:CDS | 50.0% | |
| GGTGGCTCATTTACTGGAGA+TGG | + | chr7_3:79709305-79709324 | Msa1127960:CDS | 50.0% | |
| CGTATGTTGTCTGGTGAGAC+AGG | + | chr7_3:79709651-79709670 | Msa1127960:intron | 50.0% | |
| CTTCTTTCCGGATGTTCAGC+GGG | + | chr7_3:79709763-79709782 | Msa1127960:CDS | 50.0% | |
| ! | GTGAAGTGTCTTAGCGATGC+AGG | + | chr7_3:79709847-79709866 | Msa1127960:CDS | 50.0% |
| ACCCTCCGGAATATGTACAG+TGG | + | chr7_3:79710024-79710043 | Msa1127960:CDS | 50.0% | |
| CACCACTGTACATATTCCGG+AGG | - | chr7_3:79710029-79710048 | None:intergenic | 50.0% | |
| !! | GTGGCCTTGTGCATTTAGCA+TGG | - | chr7_3:79710779-79710798 | None:intergenic | 50.0% |
| CTCCTTTCGCAGCTGCATTG+TGG | - | chr7_3:79708695-79708714 | None:intergenic | 55.0% | |
| AATGCAGCTGCGAAAGGAGC+AGG | + | chr7_3:79708696-79708715 | Msa1127960:CDS | 55.0% | |
| ACTGTCATCAGGGAGGTGGA+TGG | + | chr7_3:79709019-79709038 | Msa1127960:intron | 55.0% | |
| GCGAATTTGGGCAGCTGCAA+TGG | + | chr7_3:79709699-79709718 | Msa1127960:CDS | 55.0% | |
| !! | CAGTGGTGTTGTAGGGATGC+AGG | + | chr7_3:79710041-79710060 | Msa1127960:CDS | 55.0% |
| TAGCCATGGGGATCTGCTGA+TGG | - | chr7_3:79710735-79710754 | None:intergenic | 55.0% | |
| CAGCAGATCCCCATGGCTAT+TGG | + | chr7_3:79710736-79710755 | Msa1127960:CDS | 55.0% | |
| AGGGTGAGTCCTACGAGCAG+AGG | - | chr7_3:79708669-79708688 | None:intergenic | 60.0% | |
| CTTTCCGGATGTTCAGCGGG+TGG | + | chr7_3:79709766-79709785 | Msa1127960:CDS | 60.0% | |
| TAGGCCACCCGCTGAACATC+CGG | - | chr7_3:79709773-79709792 | None:intergenic | 60.0% | |
| CCATGGGGATCTGCTGATGG+AGG | - | chr7_3:79710732-79710751 | None:intergenic | 60.0% | |
| CCTCCATCAGCAGATCCCCA+TGG | + | chr7_3:79710729-79710748 | Msa1127960:CDS | 60.0% | |
| TCGCTCACTGCCAAACCGAG+AGG | + | chr7_3:79711006-79711025 | Msa1127960:CDS | 60.0% | |
| TATCTGGCGAGCGCACCCTC+CGG | + | chr7_3:79710010-79710029 | Msa1127960:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 79708434 | 79711673 | 79708434 | ID=Msa1127960;Name=Msa1127960 |
| chr7_3 | mRNA | 79708434 | 79711673 | 79708434 | ID=Msa1127960-mRNA-1;Parent=Msa1127960;Name=Msa1127960-mRNA-1;_AED=0.14;_eAED=0.14;_QI=58|1|1|1|1|1|11|337|425 |
| chr7_3 | exon | 79708434 | 79708717 | 79708434 | ID=Msa1127960-mRNA-1:exon:22628;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79708790 | 79708872 | 79708790 | ID=Msa1127960-mRNA-1:exon:22629;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79709030 | 79709159 | 79709030 | ID=Msa1127960-mRNA-1:exon:22630;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79709264 | 79709337 | 79709264 | ID=Msa1127960-mRNA-1:exon:22631;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79709673 | 79709884 | 79709673 | ID=Msa1127960-mRNA-1:exon:22632;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79710002 | 79710062 | 79710002 | ID=Msa1127960-mRNA-1:exon:22633;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79710191 | 79710244 | 79710191 | ID=Msa1127960-mRNA-1:exon:22634;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79710392 | 79710469 | 79710392 | ID=Msa1127960-mRNA-1:exon:22635;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79710711 | 79710816 | 79710711 | ID=Msa1127960-mRNA-1:exon:22636;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79710928 | 79711073 | 79710928 | ID=Msa1127960-mRNA-1:exon:22637;Parent=Msa1127960-mRNA-1 |
| chr7_3 | exon | 79711229 | 79711673 | 79711229 | ID=Msa1127960-mRNA-1:exon:22638;Parent=Msa1127960-mRNA-1 |
| chr7_3 | five_prime_UTR | 79708434 | 79708491 | 79708434 | ID=Msa1127960-mRNA-1:five_prime_utr;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79708492 | 79708717 | 79708492 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79708790 | 79708872 | 79708790 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79709030 | 79709159 | 79709030 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79709264 | 79709337 | 79709264 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79709673 | 79709884 | 79709673 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79710002 | 79710062 | 79710002 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79710191 | 79710244 | 79710191 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79710392 | 79710469 | 79710392 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79710711 | 79710816 | 79710711 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79710928 | 79711073 | 79710928 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | CDS | 79711229 | 79711336 | 79711229 | ID=Msa1127960-mRNA-1:cds;Parent=Msa1127960-mRNA-1 |
| chr7_3 | three_prime_UTR | 79711337 | 79711673 | 79711337 | ID=Msa1127960-mRNA-1:three_prime_utr;Parent=Msa1127960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
