Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083730 | AES82522.1 | 99.615 | 260 | 1 | 0 | 1 | 260 | 52 | 311 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083730 | sp|Q8L4B2|NFYC9_ARATH | 62.500 | 248 | 63 | 8 | 1 | 247 | 1 | 219 | 4.84e-87 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083730 | G7KYQ4 | 99.615 | 260 | 1 | 0 | 1 | 260 | 52 | 311 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1083730 | TF | NF-YC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043960 | Msa1083730 | 0.800521 | 1.386056e-48 | -8.615850e-47 |
| Msa0183800 | Msa1083730 | 0.807021 | 6.194931e-50 | -8.615850e-47 |
| Msa0185330 | Msa1083730 | 0.998524 | 1.180536e-267 | -8.615850e-47 |
| Msa1083730 | Msa1131190 | 0.916182 | 2.422579e-85 | -8.615850e-47 |
| Msa1083730 | Msa1381220 | 0.988235 | 3.126632e-173 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083730 | MtrunA17_Chr7g0272991 | 99.615 | 260 | 1 | 0 | 1 | 260 | 1 | 260 | 0.0 | 537 |
| Msa1083730 | MtrunA17_Chr1g0191681 | 83.539 | 243 | 36 | 1 | 1 | 243 | 1 | 239 | 3.62e-140 | 394 |
| Msa1083730 | MtrunA17_Chr2g0310741 | 55.785 | 242 | 92 | 7 | 12 | 247 | 15 | 247 | 9.87e-76 | 231 |
| Msa1083730 | MtrunA17_Chr3g0132191 | 66.038 | 159 | 39 | 4 | 83 | 238 | 37 | 183 | 1.24e-62 | 196 |
| Msa1083730 | MtrunA17_Chr2g0288481 | 49.468 | 188 | 70 | 8 | 82 | 259 | 66 | 238 | 6.82e-53 | 172 |
| Msa1083730 | MtrunA17_Chr2g0318881 | 59.770 | 87 | 34 | 1 | 100 | 185 | 21 | 107 | 1.64e-31 | 112 |
| Msa1083730 | MtrunA17_Chr2g0318921 | 61.446 | 83 | 31 | 1 | 100 | 181 | 21 | 103 | 6.70e-31 | 111 |
| Msa1083730 | MtrunA17_Chr8g0376351 | 61.333 | 75 | 28 | 1 | 119 | 192 | 1 | 75 | 2.16e-27 | 101 |
| Msa1083730 | MtrunA17_Chr3g0081161 | 39.744 | 78 | 47 | 0 | 102 | 179 | 9 | 86 | 7.89e-12 | 63.9 |
| Msa1083730 | MtrunA17_Chr8g0354151 | 37.179 | 78 | 49 | 0 | 102 | 179 | 9 | 86 | 1.47e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083730 | AT1G08970.3 | 62.500 | 248 | 63 | 8 | 1 | 247 | 1 | 219 | 4.92e-88 | 261 |
| Msa1083730 | AT1G08970.4 | 62.500 | 248 | 63 | 8 | 1 | 247 | 1 | 219 | 4.92e-88 | 261 |
| Msa1083730 | AT1G08970.2 | 62.500 | 248 | 63 | 8 | 1 | 247 | 1 | 219 | 4.92e-88 | 261 |
| Msa1083730 | AT1G08970.1 | 62.500 | 248 | 63 | 8 | 1 | 247 | 1 | 219 | 4.92e-88 | 261 |
| Msa1083730 | AT1G54830.2 | 63.636 | 242 | 56 | 5 | 16 | 256 | 5 | 215 | 2.92e-87 | 259 |
| Msa1083730 | AT1G54830.3 | 63.636 | 242 | 56 | 5 | 16 | 256 | 5 | 215 | 2.92e-87 | 259 |
| Msa1083730 | AT1G54830.1 | 63.636 | 242 | 56 | 5 | 16 | 256 | 5 | 215 | 2.92e-87 | 259 |
| Msa1083730 | AT3G48590.1 | 68.790 | 157 | 44 | 3 | 83 | 238 | 47 | 199 | 1.76e-70 | 216 |
| Msa1083730 | AT5G63470.2 | 68.987 | 158 | 45 | 4 | 83 | 238 | 60 | 215 | 2.07e-67 | 209 |
| Msa1083730 | AT5G63470.1 | 68.987 | 158 | 45 | 4 | 83 | 238 | 60 | 215 | 2.07e-67 | 209 |
| Msa1083730 | AT1G56170.1 | 75.758 | 132 | 25 | 3 | 80 | 209 | 55 | 181 | 1.35e-66 | 205 |
| Msa1083730 | AT1G56170.2 | 75.758 | 132 | 25 | 3 | 80 | 209 | 55 | 181 | 1.35e-66 | 205 |
| Msa1083730 | AT5G50480.1 | 49.123 | 171 | 63 | 5 | 79 | 248 | 35 | 182 | 2.74e-46 | 154 |
| Msa1083730 | AT5G27910.1 | 45.349 | 172 | 72 | 8 | 77 | 248 | 15 | 164 | 4.68e-39 | 134 |
| Msa1083730 | AT5G50490.1 | 38.889 | 180 | 96 | 4 | 70 | 249 | 8 | 173 | 1.71e-34 | 123 |
| Msa1083730 | AT5G50470.1 | 39.560 | 182 | 71 | 8 | 79 | 251 | 44 | 195 | 9.78e-31 | 114 |
| Msa1083730 | AT5G38140.1 | 43.269 | 104 | 55 | 2 | 76 | 178 | 44 | 144 | 1.41e-25 | 100 |
| Msa1083730 | AT3G12480.1 | 37.179 | 78 | 49 | 0 | 102 | 179 | 9 | 86 | 1.30e-11 | 63.9 |
Find 123 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTGGGTAAAATGTAATT+TGG | 0.125571 | 7_2:-84056020 | Msa1083730:three_prime_UTR |
| AAGCCAGCACTTCATCTTTC+AGG | 0.158704 | 7_2:+84056676 | None:intergenic |
| GTCATTTGGTTTGGCTGATA+TGG | 0.158964 | 7_2:+84057140 | None:intergenic |
| GACTGATATCTTTGATTTCC+TGG | 0.246183 | 7_2:-84056721 | Msa1083730:CDS |
| TAATTTGGGTTTAAACCTTA+TGG | 0.256597 | 7_2:-84056005 | Msa1083730:three_prime_UTR |
| TCAACCTGCTGGAGCTCAGC+TGG | 0.263146 | 7_2:-84057066 | Msa1083730:CDS |
| GCAGACTTCTATTGCCTATT+GGG | 0.267661 | 7_2:-84055950 | Msa1083730:three_prime_UTR |
| TGCAGACTTCTATTGCCTAT+TGG | 0.280582 | 7_2:-84055951 | Msa1083730:three_prime_UTR |
| ATCTTTATGTTTAATTAAGC+TGG | 0.286907 | 7_2:-84056036 | Msa1083730:three_prime_UTR |
| CTATTGGGTTATATTTACTA+TGG | 0.312585 | 7_2:-84055935 | Msa1083730:three_prime_UTR |
| GGGGCCCCAGTCATTTGGTT+TGG | 0.316348 | 7_2:+84057131 | None:intergenic |
| AGCTGGGTAAAATGTAATTT+GGG | 0.319298 | 7_2:-84056019 | Msa1083730:three_prime_UTR |
| TTTCCTGGCTTGCAGATTGC+AGG | 0.326598 | 7_2:-84056173 | Msa1083730:intron |
| GGAGATGGTGGTCGCTGTTC+CGG | 0.343092 | 7_2:+84056468 | None:intergenic |
| TAAAGGAATCATAGATTTGC+AGG | 0.344712 | 7_2:+84055876 | None:intergenic |
| GGCTGCTGAGCATACATGTT+TGG | 0.345011 | 7_2:+84056528 | None:intergenic |
| GCCTCCCAAGTTGGAACTGC+TGG | 0.356093 | 7_2:-84056579 | Msa1083730:CDS |
| ACATAAAGATAAGTTATTAC+TGG | 0.361320 | 7_2:+84056049 | None:intergenic |
| GATCCGTTGTTACATCAGTT+GGG | 0.366704 | 7_2:-84057106 | Msa1083730:CDS |
| ATCCTGGGGCCCCAGTCATT+TGG | 0.379289 | 7_2:+84057126 | None:intergenic |
| TCATTTGGTTTGGCTGATAT+GGG | 0.380613 | 7_2:+84057141 | None:intergenic |
| GGTTTAAACCTTATGGTCTT+CGG | 0.383720 | 7_2:-84055998 | Msa1083730:three_prime_UTR |
| ACTGATGTAACAACGGATCC+TGG | 0.389880 | 7_2:+84057110 | None:intergenic |
| TGGAACTGCTGGTGTCATAA+TGG | 0.411463 | 7_2:-84056568 | Msa1083730:CDS |
| CACAACCAGAATCCGCAAAT+GGG | 0.411828 | 7_2:-84057203 | Msa1083730:CDS |
| AGAGGAACAATGCCTGTTGC+TGG | 0.417994 | 7_2:-84056645 | Msa1083730:CDS |
| GGATCCGTTGTTACATCAGT+TGG | 0.426256 | 7_2:-84057107 | Msa1083730:CDS |
| CATAGTAAATATAACCCAAT+AGG | 0.426321 | 7_2:+84055936 | None:intergenic |
| AACAACAGCTGCAATCCTTC+TGG | 0.435091 | 7_2:-84056989 | Msa1083730:CDS |
| GCTGCTGAGCATACATGTTT+GGG | 0.435445 | 7_2:+84056529 | None:intergenic |
| CATCTCAGCATCTAGTGATC+TGG | 0.437549 | 7_2:+84056447 | None:intergenic |
| TCATGGTCTTCTACCCCATC+GGG | 0.441080 | 7_2:-84055842 | None:intergenic |
| AGATTGCAGGGAACTGCAAT+GGG | 0.446408 | 7_2:-84056160 | Msa1083730:three_prime_UTR |
| CAGTGTGGTTCCATGAGCGC+AGG | 0.449372 | 7_2:+84056799 | None:intergenic |
| ACAAATGTGGCCACAGCCTC+CGG | 0.450073 | 7_2:-84056487 | Msa1083730:CDS |
| GCACAACCAGAATCCGCAAA+TGG | 0.451270 | 7_2:-84057204 | Msa1083730:CDS |
| CAAGAACCACAGCCTTCCTC+TGG | 0.452736 | 7_2:-84056928 | Msa1083730:CDS |
| GCATCAGCAGGACCAGCAAC+AGG | 0.455014 | 7_2:+84056633 | None:intergenic |
| GTTGCTGCTGTTGCTGCTGA+TGG | 0.455992 | 7_2:+84057015 | None:intergenic |
| GGCCTGTGAGATGTTCATAT+TGG | 0.456864 | 7_2:-84056829 | Msa1083730:CDS |
| CCATGAGAGTTGACTGCTAA+AGG | 0.458260 | 7_2:+84055859 | None:intergenic |
| TGGAGTTAACCCTGCGCTCA+TGG | 0.458619 | 7_2:-84056809 | Msa1083730:CDS |
| CAGTCCACTGGTCAACCTGC+TGG | 0.464075 | 7_2:-84057077 | Msa1083730:CDS |
| CACATTTGTGGTGCCATGTA+GGG | 0.465255 | 7_2:+84056501 | None:intergenic |
| CTGATGTAACAACGGATCCT+GGG | 0.469388 | 7_2:+84057111 | None:intergenic |
| CTGGTACTGGTTTGACCAGA+AGG | 0.471679 | 7_2:+84056974 | None:intergenic |
| CAACCTGCTGGAGCTCAGCT+GGG | 0.476224 | 7_2:-84057065 | Msa1083730:CDS |
| ATGCTGAGATGTGGATGTTA+AGG | 0.476601 | 7_2:-84056435 | Msa1083730:intron |
| TGACACCAGCAGTTCCAACT+TGG | 0.478083 | 7_2:+84056574 | None:intergenic |
| GGAACTGCTGGTGTCATAAT+GGG | 0.479046 | 7_2:-84056567 | Msa1083730:CDS |
| TCTTTATGTTTAATTAAGCT+GGG | 0.482086 | 7_2:-84056035 | Msa1083730:three_prime_UTR |
| TTGTGGTGCCATGTAGGGAT+GGG | 0.484954 | 7_2:+84056506 | None:intergenic |
| AACCAAATGACTGGGGCCCC+AGG | 0.486456 | 7_2:-84057128 | Msa1083730:CDS |
| TTTGTGGTGCCATGTAGGGA+TGG | 0.486986 | 7_2:+84056505 | None:intergenic |
| GGAGGCTGTGGCCACATTTG+TGG | 0.486993 | 7_2:+84056489 | None:intergenic |
| GCAACAGGCATTGTTCCTCT+TGG | 0.487666 | 7_2:+84056648 | None:intergenic |
| TGGGTGTGAAACTGTTCCAT+TGG | 0.491473 | 7_2:-84056135 | Msa1083730:three_prime_UTR |
| ACCACACTGAAGAGAACAAA+AGG | 0.492883 | 7_2:-84056785 | Msa1083730:CDS |
| CCACATTTGTGGTGCCATGT+AGG | 0.497501 | 7_2:+84056500 | None:intergenic |
| TACATGTTTGGGTCCATCAC+AGG | 0.504424 | 7_2:+84056540 | None:intergenic |
| TATATCATCCGAAGACCATA+AGG | 0.504471 | 7_2:+84055990 | None:intergenic |
| TATCAGCCAAACCAAATGAC+TGG | 0.504884 | 7_2:-84057137 | Msa1083730:CDS |
| CCTCAGCATGCCTCCCAAGT+TGG | 0.514710 | 7_2:-84056588 | Msa1083730:CDS |
| TCTTGATCCTTGCCAGAGGA+AGG | 0.515769 | 7_2:+84056916 | None:intergenic |
| GTTGCTGCTGATGGATATGC+TGG | 0.517658 | 7_2:+84057024 | None:intergenic |
| TGACCCAGCTGAGCTCCAGC+AGG | 0.517937 | 7_2:+84057062 | None:intergenic |
| CCAGTACCAGGAAATTGAAA+AGG | 0.518655 | 7_2:-84056961 | Msa1083730:CDS |
| CTTCTGGTCAAACCAGTACC+AGG | 0.521956 | 7_2:-84056973 | Msa1083730:CDS |
| TTCCTGGCTTGCAGATTGCA+GGG | 0.525676 | 7_2:-84056172 | Msa1083730:intron |
| CCTTTAGCAGTCAACTCTCA+TGG | 0.529370 | 7_2:-84055859 | Msa1083730:three_prime_UTR |
| CAGATTGCAGGGAACTGCAA+TGG | 0.530413 | 7_2:-84056161 | Msa1083730:three_prime_UTR |
| ATCCGTTGTTACATCAGTTG+GGG | 0.531831 | 7_2:-84057105 | Msa1083730:CDS |
| CTCATGGTCTTCTACCCCAT+CGG | 0.534855 | 7_2:-84055843 | None:intergenic |
| GGTCGCTGTTCCGGAGGCTG+TGG | 0.539229 | 7_2:+84056477 | None:intergenic |
| GGACCTGAAAGATGAAGTGC+TGG | 0.542953 | 7_2:-84056679 | Msa1083730:CDS |
| TGTGGTGCCATGTAGGGATG+GGG | 0.546062 | 7_2:+84056507 | None:intergenic |
| ACTTGGGAGGCATGCTGAGG+TGG | 0.548128 | 7_2:+84056591 | None:intergenic |
| ATCAGCCAAACCAAATGACT+GGG | 0.550264 | 7_2:-84057136 | Msa1083730:CDS |
| GACACCAGCAGTTCCAACTT+GGG | 0.552393 | 7_2:+84056575 | None:intergenic |
| AAGCACCTGTCATATTTGCA+AGG | 0.553287 | 7_2:-84056851 | Msa1083730:CDS |
| CAGTAAGGAAGAGCATCAGC+AGG | 0.560205 | 7_2:+84056621 | None:intergenic |
| CAGGCCCTTGCAAATATGAC+AGG | 0.560856 | 7_2:+84056846 | None:intergenic |
| TCAGCAGCCCCATCCCTACA+TGG | 0.562305 | 7_2:-84056514 | Msa1083730:CDS |
| ATCAGAAACTGTAGCTGAGA+TGG | 0.564284 | 7_2:-84056108 | Msa1083730:three_prime_UTR |
| TCCTTGCCAGAGGAAGGCTG+TGG | 0.564697 | 7_2:+84056922 | None:intergenic |
| GGAATCATAGATTTGCAGGC+AGG | 0.566600 | 7_2:+84055880 | None:intergenic |
| CAAAACAGAATGGATCATCA+AGG | 0.570283 | 7_2:-84057227 | Msa1083730:intron |
| AGCATCTAGTGATCTGGAGA+TGG | 0.574668 | 7_2:+84056453 | None:intergenic |
| ATATTGCTGCTGCAATCACT+AGG | 0.575052 | 7_2:-84056743 | Msa1083730:CDS |
| GAAGATCATGAAGGCTGATG+AGG | 0.575398 | 7_2:-84056895 | Msa1083730:CDS |
| TGAGGTGGCATGTAGCAGTA+AGG | 0.584291 | 7_2:+84056606 | None:intergenic |
| ACCACAGCCTTCCTCTGGCA+AGG | 0.585880 | 7_2:-84056923 | Msa1083730:CDS |
| ACAGTTTCTGATCGCACCAA+TGG | 0.588674 | 7_2:+84056119 | None:intergenic |
| AGCTCCAGCAGGTTGACCAG+TGG | 0.593284 | 7_2:+84057073 | None:intergenic |
| CATAATGGGAAAGCCTGTGA+TGG | 0.593370 | 7_2:-84056553 | Msa1083730:CDS |
| CACGAGGCACAATGTCAACC+AGG | 0.593690 | 7_2:+84056703 | None:intergenic |
| ACAACCAGAATCCGCAAATG+GGG | 0.594889 | 7_2:-84057202 | Msa1083730:CDS |
| ATTGCAGGGAACTGCAATGG+GGG | 0.605277 | 7_2:-84056158 | Msa1083730:three_prime_UTR |
| ATCTAGTGATCTGGAGATGG+TGG | 0.605869 | 7_2:+84056456 | None:intergenic |
| CTCCAATATGAACATCTCAC+AGG | 0.609517 | 7_2:+84056827 | None:intergenic |
| TGATATGGGTTAGATCCGTA+CGG | 0.617785 | 7_2:+84057155 | None:intergenic |
| AGCGGCAGTCAAATGCCGTA+CGG | 0.619913 | 7_2:-84057170 | Msa1083730:CDS |
| TGATGTAACAACGGATCCTG+GGG | 0.620797 | 7_2:+84057112 | None:intergenic |
| AGCACCTGTCATATTTGCAA+GGG | 0.622434 | 7_2:-84056850 | Msa1083730:CDS |
| ATCTTCTTGATCCTTGCCAG+AGG | 0.624577 | 7_2:+84056912 | None:intergenic |
| AAAACAGAATGGATCATCAA+GGG | 0.625548 | 7_2:-84057226 | Msa1083730:intron |
| ACCAGCAGTTCCAACTTGGG+AGG | 0.637100 | 7_2:+84056578 | None:intergenic |
| AGTGTGGTTCCATGAGCGCA+GGG | 0.637592 | 7_2:+84056800 | None:intergenic |
| GATCACTAGATGCTGAGATG+TGG | 0.638929 | 7_2:-84056444 | Msa1083730:exon |
| CCTACATGGCACCACAAATG+TGG | 0.644640 | 7_2:-84056500 | Msa1083730:CDS |
| GATGGTGGTCGCTGTTCCGG+AGG | 0.649506 | 7_2:+84056471 | None:intergenic |
| CCAACTTGGGAGGCATGCTG+AGG | 0.657795 | 7_2:+84056588 | None:intergenic |
| ATTCCTTCTATTCCCCGATG+GGG | 0.660173 | 7_2:+84055829 | None:intergenic |
| TCATCTTTCAGGTCCTCACG+AGG | 0.665344 | 7_2:+84056687 | None:intergenic |
| AAGGATCAAGAAGATCATGA+AGG | 0.667741 | 7_2:-84056904 | Msa1083730:CDS |
| TCCGTTGTTACATCAGTTGG+GGG | 0.670764 | 7_2:-84057104 | Msa1083730:CDS |
| GGTTGACATTGTGCCTCGTG+AGG | 0.672349 | 7_2:-84056700 | Msa1083730:CDS |
| CAACCAGAATCCGCAAATGG+GGG | 0.676007 | 7_2:-84057201 | Msa1083730:CDS |
| ACACTGAAGAGAACAAAAGG+AGG | 0.682027 | 7_2:-84056782 | Msa1083730:CDS |
| GATTGCAGGGAACTGCAATG+GGG | 0.700328 | 7_2:-84056159 | Msa1083730:three_prime_UTR |
| CATGGTCTTCTACCCCATCG+GGG | 0.703842 | 7_2:-84055841 | None:intergenic |
| GTGCTGGCTTCAATTCCAAG+AGG | 0.714242 | 7_2:-84056663 | Msa1083730:CDS |
| TCAGCCAAACCAAATGACTG+GGG | 0.740826 | 7_2:-84057135 | Msa1083730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACATCAAAAA+AGG | + | chr7_2:84056508-84056527 | None:intergenic | 10.0% |
| !!! | TGATTATTGTTTTTCTTTTT+TGG | - | chr7_2:84056376-84056395 | Msa1083730:intron | 15.0% |
| !!! | TGTAAATTGAAAACTTATTT+TGG | - | chr7_2:84056698-84056717 | Msa1083730:CDS | 15.0% |
| !!! | TTTCATTTTCAAAGAAAAGA+AGG | - | chr7_2:84055921-84055940 | Msa1083730:three_prime_UTR | 20.0% |
| !! | AAGAAGAGAAAAAAAGTTTA+GGG | + | chr7_2:84056025-84056044 | None:intergenic | 20.0% |
| !! | AAAGAAGAGAAAAAAAGTTT+AGG | + | chr7_2:84056026-84056045 | None:intergenic | 20.0% |
| !!! | TAAACTTTTTTTCTCTTCTT+TGG | - | chr7_2:84056025-84056044 | Msa1083730:three_prime_UTR | 20.0% |
| !!! | AAACTTTTTTTCTCTTCTTT+GGG | - | chr7_2:84056026-84056045 | Msa1083730:three_prime_UTR | 20.0% |
| !! | ATACAGAAAAAAAAATGAAC+TGG | + | chr7_2:84056248-84056267 | None:intergenic | 20.0% |
| !! | TCAACAGAACAAAAATTATT+CGG | + | chr7_2:84056584-84056603 | None:intergenic | 20.0% |
| !!! | AAACTTATTTTGGTATTCTA+AGG | - | chr7_2:84056708-84056727 | Msa1083730:CDS | 20.0% |
| !!! | AACTTATTTTGGTATTCTAA+GGG | - | chr7_2:84056709-84056728 | Msa1083730:CDS | 20.0% |
| !! | CTAATAAAATAGCATACAAA+AGG | + | chr7_2:84058050-84058069 | None:intergenic | 20.0% |
| !!! | TTTTATTAGTTAGCTTGATT+AGG | - | chr7_2:84058061-84058080 | Msa1083730:intron | 20.0% |
| !! | ACATAAAGATAAGTTATTAC+TGG | + | chr7_2:84058316-84058335 | None:intergenic | 20.0% |
| !! | ATCTTTATGTTTAATTAAGC+TGG | - | chr7_2:84058326-84058345 | Msa1083730:intron | 20.0% |
| !! | TCTTTATGTTTAATTAAGCT+GGG | - | chr7_2:84058327-84058346 | Msa1083730:intron | 20.0% |
| !!! | TCATTTTTTGTTTCTCTGAA+TGG | - | chr7_2:84056537-84056556 | Msa1083730:CDS | 25.0% |
| !! | GATTTTATGTCAAAACAGAA+TGG | - | chr7_2:84057125-84057144 | Msa1083730:CDS | 25.0% |
| !! | TAATTTGGGTTTAAACCTTA+TGG | - | chr7_2:84058357-84058376 | Msa1083730:intron | 25.0% |
| ! | CATAGTAAATATAACCCAAT+AGG | + | chr7_2:84058429-84058448 | None:intergenic | 25.0% |
| ! | CTATTGGGTTATATTTACTA+TGG | - | chr7_2:84058427-84058446 | Msa1083730:intron | 25.0% |
| ! | GAGTTGTTATGATAATGCTT+TGG | + | chr7_2:84056065-84056084 | None:intergenic | 30.0% |
| AAAACTGAGAACCTGAAAAA+GGG | + | chr7_2:84056176-84056195 | None:intergenic | 30.0% | |
| GAATGGAGAATACATATTAC+TGG | - | chr7_2:84056554-84056573 | Msa1083730:CDS | 30.0% | |
| !! | GAAGATTTGTTGATCAAATC+TGG | - | chr7_2:84056731-84056750 | Msa1083730:CDS | 30.0% |
| GATTTATGCATGTCATGAAA+TGG | - | chr7_2:84056838-84056857 | Msa1083730:CDS | 30.0% | |
| GTTTAATGCATAGGAAAAAC+GGG | + | chr7_2:84056990-84057009 | None:intergenic | 30.0% | |
| CGTTTAATGCATAGGAAAAA+CGG | + | chr7_2:84056991-84057010 | None:intergenic | 30.0% | |
| ! | CGTTTTTCCTATGCATTAAA+CGG | - | chr7_2:84056989-84057008 | Msa1083730:CDS | 30.0% |
| AACAAATCATGCAATCATTG+AGG | + | chr7_2:84057067-84057086 | None:intergenic | 30.0% | |
| CATAAAATCAAACACGTGAT+CGG | + | chr7_2:84057114-84057133 | None:intergenic | 30.0% | |
| AAAACAGAATGGATCATCAA+GGG | - | chr7_2:84057136-84057155 | Msa1083730:CDS | 30.0% | |
| TCCTTATACTTGATCTTTGA+TGG | - | chr7_2:84058112-84058131 | Msa1083730:intron | 30.0% | |
| ACCATCAAAGATCAAGTATA+AGG | + | chr7_2:84058116-84058135 | None:intergenic | 30.0% | |
| ! | CGCACATTTACTGTTATTTA+TGG | - | chr7_2:84058136-84058155 | Msa1083730:intron | 30.0% |
| AAGGCAATTTCAGACATAAA+AGG | + | chr7_2:84058167-84058186 | None:intergenic | 30.0% | |
| AAGCTGGGTAAAATGTAATT+TGG | - | chr7_2:84058342-84058361 | Msa1083730:intron | 30.0% | |
| AGCTGGGTAAAATGTAATTT+GGG | - | chr7_2:84058343-84058362 | Msa1083730:intron | 30.0% | |
| TAAAGGAATCATAGATTTGC+AGG | + | chr7_2:84058489-84058508 | None:intergenic | 30.0% | |
| !! | GATTGATGATGGTGTTTGTT+TGG | + | chr7_2:84055965-84055984 | None:intergenic | 35.0% |
| GTTGTTGTGAAGATTGATGA+TGG | + | chr7_2:84055976-84055995 | None:intergenic | 35.0% | |
| !! | TCTTGTTTGATCCCTTTTTC+AGG | - | chr7_2:84056162-84056181 | Msa1083730:intron | 35.0% |
| GAAAACTGAGAACCTGAAAA+AGG | + | chr7_2:84056177-84056196 | None:intergenic | 35.0% | |
| !!! | AACCAAGCTTCGTTTTTTGA+GGG | - | chr7_2:84056201-84056220 | Msa1083730:intron | 35.0% |
| TTCATAGTTATGCTGTAACG+TGG | - | chr7_2:84056301-84056320 | Msa1083730:intron | 35.0% | |
| AAATTCTTAGCTTCCATCAC+AGG | + | chr7_2:84056447-84056466 | None:intergenic | 35.0% | |
| TTCGAGATACAATTGTGCAT+GGG | - | chr7_2:84056786-84056805 | Msa1083730:CDS | 35.0% | |
| AAGCTCAGGAGAAAAATAAC+AGG | + | chr7_2:84056869-84056888 | None:intergenic | 35.0% | |
| CAACATTTCACAAACGACAA+AGG | + | chr7_2:84057091-84057110 | None:intergenic | 35.0% | |
| CAAAACAGAATGGATCATCA+AGG | - | chr7_2:84057135-84057154 | Msa1083730:CDS | 35.0% | |
| !! | TCATTTGGTTTGGCTGATAT+GGG | + | chr7_2:84057224-84057243 | None:intergenic | 35.0% |
| ! | CAGTAACCTTTTCAATTTCC+TGG | + | chr7_2:84057410-84057429 | None:intergenic | 35.0% |
| AAGGATCAAGAAGATCATGA+AGG | - | chr7_2:84057458-84057477 | Msa1083730:intron | 35.0% | |
| ! | GACTGATATCTTTGATTTCC+TGG | - | chr7_2:84057641-84057660 | Msa1083730:intron | 35.0% |
| GGTTTAAACCTTATGGTCTT+CGG | - | chr7_2:84058364-84058383 | Msa1083730:intron | 35.0% | |
| TATATCATCCGAAGACCATA+AGG | + | chr7_2:84058375-84058394 | None:intergenic | 35.0% | |
| AATCGTGAGAAACGAGAGAA+TGG | + | chr7_2:84056141-84056160 | None:intergenic | 40.0% | |
| !!! | GAACCAAGCTTCGTTTTTTG+AGG | - | chr7_2:84056200-84056219 | Msa1083730:intron | 40.0% |
| TTCCCTCAAAAAACGAAGCT+TGG | + | chr7_2:84056206-84056225 | None:intergenic | 40.0% | |
| !!! | AAGCTTCGTTTTTTGAGGGA+AGG | - | chr7_2:84056205-84056224 | Msa1083730:intron | 40.0% |
| CTAAAAGACCTGTTCACACA+AGG | + | chr7_2:84056650-84056669 | None:intergenic | 40.0% | |
| GTTCGAGATACAATTGTGCA+TGG | - | chr7_2:84056785-84056804 | Msa1083730:CDS | 40.0% | |
| ! | TCGTTTTCGATCATGACACA+CGG | - | chr7_2:84056892-84056911 | Msa1083730:CDS | 40.0% |
| AGCGTAACCGTTTAATGCAT+AGG | + | chr7_2:84056999-84057018 | None:intergenic | 40.0% | |
| !! | TGATATGGGTTAGATCCGTA+CGG | + | chr7_2:84057210-84057229 | None:intergenic | 40.0% |
| !! | GTCATTTGGTTTGGCTGATA+TGG | + | chr7_2:84057225-84057244 | None:intergenic | 40.0% |
| TATCAGCCAAACCAAATGAC+TGG | - | chr7_2:84057225-84057244 | Msa1083730:intron | 40.0% | |
| ATCAGCCAAACCAAATGACT+GGG | - | chr7_2:84057226-84057245 | Msa1083730:intron | 40.0% | |
| GATCCGTTGTTACATCAGTT+GGG | - | chr7_2:84057256-84057275 | Msa1083730:intron | 40.0% | |
| ATCCGTTGTTACATCAGTTG+GGG | - | chr7_2:84057257-84057276 | Msa1083730:intron | 40.0% | |
| ! | CCTTTTCAATTTCCTGGTAC+TGG | + | chr7_2:84057404-84057423 | None:intergenic | 40.0% |
| CCAGTACCAGGAAATTGAAA+AGG | - | chr7_2:84057401-84057420 | Msa1083730:intron | 40.0% | |
| AAGCACCTGTCATATTTGCA+AGG | - | chr7_2:84057511-84057530 | Msa1083730:intron | 40.0% | |
| AGCACCTGTCATATTTGCAA+GGG | - | chr7_2:84057512-84057531 | Msa1083730:intron | 40.0% | |
| CTCCAATATGAACATCTCAC+AGG | + | chr7_2:84057538-84057557 | None:intergenic | 40.0% | |
| ACCACACTGAAGAGAACAAA+AGG | - | chr7_2:84057577-84057596 | Msa1083730:intron | 40.0% | |
| ! | TCCTTTTGTTCTCTTCAGTG+TGG | + | chr7_2:84057581-84057600 | None:intergenic | 40.0% |
| ACACTGAAGAGAACAAAAGG+AGG | - | chr7_2:84057580-84057599 | Msa1083730:intron | 40.0% | |
| ATATTGCTGCTGCAATCACT+AGG | - | chr7_2:84057619-84057638 | Msa1083730:intron | 40.0% | |
| ATGCTGAGATGTGGATGTTA+AGG | - | chr7_2:84057927-84057946 | Msa1083730:intron | 40.0% | |
| CTGAAATTGCCTTCATTTCC+TGG | - | chr7_2:84058174-84058193 | Msa1083730:five_prime_UTR | 40.0% | |
| ATCAGAAACTGTAGCTGAGA+TGG | - | chr7_2:84058254-84058273 | Msa1083730:intron | 40.0% | |
| TGCAGACTTCTATTGCCTAT+TGG | - | chr7_2:84058411-84058430 | Msa1083730:intron | 40.0% | |
| GCAGACTTCTATTGCCTATT+GGG | - | chr7_2:84058412-84058431 | Msa1083730:intron | 40.0% | |
| ATCGAAAACGACGTAAGCTC+AGG | + | chr7_2:84056883-84056902 | None:intergenic | 45.0% | |
| TTTCGATCATGACACACGGT+TGG | - | chr7_2:84056896-84056915 | Msa1083730:CDS | 45.0% | |
| TTCGATCATGACACACGGTT+GGG | - | chr7_2:84056897-84056916 | Msa1083730:CDS | 45.0% | |
| CGACACAGGCTCAGAAAAAA+CGG | + | chr7_2:84056940-84056959 | None:intergenic | 45.0% | |
| CACAACCAGAATCCGCAAAT+GGG | - | chr7_2:84057159-84057178 | Msa1083730:CDS | 45.0% | |
| ACAACCAGAATCCGCAAATG+GGG | - | chr7_2:84057160-84057179 | Msa1083730:CDS | 45.0% | |
| TCAGCCAAACCAAATGACTG+GGG | - | chr7_2:84057227-84057246 | Msa1083730:intron | 45.0% | |
| TGATGTAACAACGGATCCTG+GGG | + | chr7_2:84057253-84057272 | None:intergenic | 45.0% | |
| CTGATGTAACAACGGATCCT+GGG | + | chr7_2:84057254-84057273 | None:intergenic | 45.0% | |
| ACTGATGTAACAACGGATCC+TGG | + | chr7_2:84057255-84057274 | None:intergenic | 45.0% | |
| GGATCCGTTGTTACATCAGT+TGG | - | chr7_2:84057255-84057274 | Msa1083730:intron | 45.0% | |
| TCCGTTGTTACATCAGTTGG+GGG | - | chr7_2:84057258-84057277 | Msa1083730:intron | 45.0% | |
| AACAACAGCTGCAATCCTTC+TGG | - | chr7_2:84057373-84057392 | Msa1083730:intron | 45.0% | |
| ATCTTCTTGATCCTTGCCAG+AGG | + | chr7_2:84057453-84057472 | None:intergenic | 45.0% | |
| GAAGATCATGAAGGCTGATG+AGG | - | chr7_2:84057467-84057486 | Msa1083730:intron | 45.0% | |
| GGCCTGTGAGATGTTCATAT+TGG | - | chr7_2:84057533-84057552 | Msa1083730:intron | 45.0% | |
| AAGCCAGCACTTCATCTTTC+AGG | + | chr7_2:84057689-84057708 | None:intergenic | 45.0% | |
| !! | TGGAACTGCTGGTGTCATAA+TGG | - | chr7_2:84057794-84057813 | Msa1083730:intron | 45.0% |
| !! | GGAACTGCTGGTGTCATAAT+GGG | - | chr7_2:84057795-84057814 | Msa1083730:intron | 45.0% |
| ! | CATAATGGGAAAGCCTGTGA+TGG | - | chr7_2:84057809-84057828 | Msa1083730:intron | 45.0% |
| TACATGTTTGGGTCCATCAC+AGG | + | chr7_2:84057825-84057844 | None:intergenic | 45.0% | |
| GCTGCTGAGCATACATGTTT+GGG | + | chr7_2:84057836-84057855 | None:intergenic | 45.0% | |
| !! | CACATTTGTGGTGCCATGTA+GGG | + | chr7_2:84057864-84057883 | None:intergenic | 45.0% |
| ATCTAGTGATCTGGAGATGG+TGG | + | chr7_2:84057909-84057928 | None:intergenic | 45.0% | |
| AGCATCTAGTGATCTGGAGA+TGG | + | chr7_2:84057912-84057931 | None:intergenic | 45.0% | |
| CATCTCAGCATCTAGTGATC+TGG | + | chr7_2:84057918-84057937 | None:intergenic | 45.0% | |
| GATCACTAGATGCTGAGATG+TGG | - | chr7_2:84057918-84057937 | Msa1083730:intron | 45.0% | |
| ATCTGCAAGCCAGGAAATGA+AGG | + | chr7_2:84058186-84058205 | None:intergenic | 45.0% | |
| AGATTGCAGGGAACTGCAAT+GGG | - | chr7_2:84058202-84058221 | Msa1083730:intron | 45.0% | |
| TGGGTGTGAAACTGTTCCAT+TGG | - | chr7_2:84058227-84058246 | Msa1083730:intron | 45.0% | |
| ACAGTTTCTGATCGCACCAA+TGG | + | chr7_2:84058246-84058265 | None:intergenic | 45.0% | |
| GGAATCATAGATTTGCAGGC+AGG | + | chr7_2:84058485-84058504 | None:intergenic | 45.0% | |
| CCATGAGAGTTGACTGCTAA+AGG | + | chr7_2:84058506-84058525 | None:intergenic | 45.0% | |
| CCTTTAGCAGTCAACTCTCA+TGG | - | chr7_2:84058503-84058522 | Msa1083730:five_prime_UTR | 45.0% | |
| ! | CTCGCACTTTTGTCTCTCAG+AGG | - | chr7_2:84055884-84055903 | Msa1083730:three_prime_UTR | 50.0% |
| TGTGTGAAGCTGACCTGTGA+TGG | - | chr7_2:84056431-84056450 | Msa1083730:intron | 50.0% | |
| TGTGCATGCCTTGTGTGAAC+AGG | - | chr7_2:84056639-84056658 | Msa1083730:CDS | 50.0% | |
| TCGATCATGACACACGGTTG+GGG | - | chr7_2:84056898-84056917 | Msa1083730:CDS | 50.0% | |
| GTCGTGATCGAAAACGACAC+AGG | + | chr7_2:84056954-84056973 | None:intergenic | 50.0% | |
| GCACAACCAGAATCCGCAAA+TGG | - | chr7_2:84057158-84057177 | Msa1083730:CDS | 50.0% | |
| CAACCAGAATCCGCAAATGG+GGG | - | chr7_2:84057161-84057180 | Msa1083730:CDS | 50.0% | |
| AATCCGCAAATGGGGGTTGT+CGG | - | chr7_2:84057168-84057187 | Msa1083730:CDS | 50.0% | |
| GCCCCCAACTGATGTAACAA+CGG | + | chr7_2:84057262-84057281 | None:intergenic | 50.0% | |
| ! | GTTGCTGCTGATGGATATGC+TGG | + | chr7_2:84057341-84057360 | None:intergenic | 50.0% |
| !! | CTGGTACTGGTTTGACCAGA+AGG | + | chr7_2:84057391-84057410 | None:intergenic | 50.0% |
| CTTCTGGTCAAACCAGTACC+AGG | - | chr7_2:84057389-84057408 | Msa1083730:intron | 50.0% | |
| TCTTGATCCTTGCCAGAGGA+AGG | + | chr7_2:84057449-84057468 | None:intergenic | 50.0% | |
| CAGGCCCTTGCAAATATGAC+AGG | + | chr7_2:84057519-84057538 | None:intergenic | 50.0% | |
| ! | TCATCTTTCAGGTCCTCACG+AGG | + | chr7_2:84057678-84057697 | None:intergenic | 50.0% |
| GGACCTGAAAGATGAAGTGC+TGG | - | chr7_2:84057683-84057702 | Msa1083730:intron | 50.0% | |
| !! | GTGCTGGCTTCAATTCCAAG+AGG | - | chr7_2:84057699-84057718 | Msa1083730:intron | 50.0% |
| ! | GCAACAGGCATTGTTCCTCT+TGG | + | chr7_2:84057717-84057736 | None:intergenic | 50.0% |
| AGAGGAACAATGCCTGTTGC+TGG | - | chr7_2:84057717-84057736 | Msa1083730:intron | 50.0% | |
| !! | CAGTAAGGAAGAGCATCAGC+AGG | + | chr7_2:84057744-84057763 | None:intergenic | 50.0% |
| TGAGGTGGCATGTAGCAGTA+AGG | + | chr7_2:84057759-84057778 | None:intergenic | 50.0% | |
| GACACCAGCAGTTCCAACTT+GGG | + | chr7_2:84057790-84057809 | None:intergenic | 50.0% | |
| TGACACCAGCAGTTCCAACT+TGG | + | chr7_2:84057791-84057810 | None:intergenic | 50.0% | |
| GGCTGCTGAGCATACATGTT+TGG | + | chr7_2:84057837-84057856 | None:intergenic | 50.0% | |
| !! | TTGTGGTGCCATGTAGGGAT+GGG | + | chr7_2:84057859-84057878 | None:intergenic | 50.0% |
| !! | TTTGTGGTGCCATGTAGGGA+TGG | + | chr7_2:84057860-84057879 | None:intergenic | 50.0% |
| !! | CCACATTTGTGGTGCCATGT+AGG | + | chr7_2:84057865-84057884 | None:intergenic | 50.0% |
| CCTACATGGCACCACAAATG+TGG | - | chr7_2:84057862-84057881 | Msa1083730:intron | 50.0% | |
| ! | TTTCCTGGCTTGCAGATTGC+AGG | - | chr7_2:84058189-84058208 | Msa1083730:intron | 50.0% |
| ! | TTCCTGGCTTGCAGATTGCA+GGG | - | chr7_2:84058190-84058209 | Msa1083730:intron | 50.0% |
| CAGATTGCAGGGAACTGCAA+TGG | - | chr7_2:84058201-84058220 | Msa1083730:intron | 50.0% | |
| GATTGCAGGGAACTGCAATG+GGG | - | chr7_2:84058203-84058222 | Msa1083730:intron | 50.0% | |
| ATTGCAGGGAACTGCAATGG+GGG | - | chr7_2:84058204-84058223 | Msa1083730:intron | 50.0% | |
| CGATCATGACACACGGTTGG+GGG | - | chr7_2:84056899-84056918 | Msa1083730:CDS | 55.0% | |
| !! | GTTGGGGGCACTGCAATAGA+GGG | - | chr7_2:84056914-84056933 | Msa1083730:CDS | 55.0% |
| CAACCCCCATTTGCGGATTC+TGG | + | chr7_2:84057167-84057186 | None:intergenic | 55.0% | |
| CTACCGACAACCCCCATTTG+CGG | + | chr7_2:84057174-84057193 | None:intergenic | 55.0% | |
| CAAATGGGGGTTGTCGGTAG+CGG | - | chr7_2:84057174-84057193 | Msa1083730:CDS | 55.0% | |
| AGCGGCAGTCAAATGCCGTA+CGG | - | chr7_2:84057192-84057211 | Msa1083730:CDS | 55.0% | |
| GTTGCTGCTGTTGCTGCTGA+TGG | + | chr7_2:84057350-84057369 | None:intergenic | 55.0% | |
| CAAGAACCACAGCCTTCCTC+TGG | - | chr7_2:84057434-84057453 | Msa1083730:intron | 55.0% | |
| TGGAGTTAACCCTGCGCTCA+TGG | - | chr7_2:84057553-84057572 | Msa1083730:intron | 55.0% | |
| AGTGTGGTTCCATGAGCGCA+GGG | + | chr7_2:84057565-84057584 | None:intergenic | 55.0% | |
| CACGAGGCACAATGTCAACC+AGG | + | chr7_2:84057662-84057681 | None:intergenic | 55.0% | |
| GGTTGACATTGTGCCTCGTG+AGG | - | chr7_2:84057662-84057681 | Msa1083730:intron | 55.0% | |
| ACCAGCAGTTCCAACTTGGG+AGG | + | chr7_2:84057787-84057806 | None:intergenic | 55.0% | |
| !! | TGTGGTGCCATGTAGGGATG+GGG | + | chr7_2:84057858-84057877 | None:intergenic | 55.0% |
| ACAAATGTGGCCACAGCCTC+CGG | - | chr7_2:84057875-84057894 | Msa1083730:intron | 55.0% | |
| TTCCCTGCAATCTGCAAGCC+AGG | + | chr7_2:84058195-84058214 | None:intergenic | 55.0% | |
| !! | GGTTGGGGGCACTGCAATAG+AGG | - | chr7_2:84056913-84056932 | Msa1083730:CDS | 60.0% |
| GGGGCCCCAGTCATTTGGTT+TGG | + | chr7_2:84057234-84057253 | None:intergenic | 60.0% | |
| AACCAAATGACTGGGGCCCC+AGG | - | chr7_2:84057234-84057253 | Msa1083730:intron | 60.0% | |
| ATCCTGGGGCCCCAGTCATT+TGG | + | chr7_2:84057239-84057258 | None:intergenic | 60.0% | |
| CAGTCCACTGGTCAACCTGC+TGG | - | chr7_2:84057285-84057304 | Msa1083730:intron | 60.0% | |
| ! | AGCTCCAGCAGGTTGACCAG+TGG | + | chr7_2:84057292-84057311 | None:intergenic | 60.0% |
| TCAACCTGCTGGAGCTCAGC+TGG | - | chr7_2:84057296-84057315 | Msa1083730:intron | 60.0% | |
| CAACCTGCTGGAGCTCAGCT+GGG | - | chr7_2:84057297-84057316 | Msa1083730:intron | 60.0% | |
| ACCACAGCCTTCCTCTGGCA+AGG | - | chr7_2:84057439-84057458 | Msa1083730:intron | 60.0% | |
| TCCTTGCCAGAGGAAGGCTG+TGG | + | chr7_2:84057443-84057462 | None:intergenic | 60.0% | |
| CAGTGTGGTTCCATGAGCGC+AGG | + | chr7_2:84057566-84057585 | None:intergenic | 60.0% | |
| GCATCAGCAGGACCAGCAAC+AGG | + | chr7_2:84057732-84057751 | None:intergenic | 60.0% | |
| ! | ACTTGGGAGGCATGCTGAGG+TGG | + | chr7_2:84057774-84057793 | None:intergenic | 60.0% |
| ! | CCAACTTGGGAGGCATGCTG+AGG | + | chr7_2:84057777-84057796 | None:intergenic | 60.0% |
| CCTCAGCATGCCTCCCAAGT+TGG | - | chr7_2:84057774-84057793 | Msa1083730:intron | 60.0% | |
| ! | GCCTCCCAAGTTGGAACTGC+TGG | - | chr7_2:84057783-84057802 | Msa1083730:intron | 60.0% |
| TCAGCAGCCCCATCCCTACA+TGG | - | chr7_2:84057848-84057867 | Msa1083730:intron | 60.0% | |
| GGAGGCTGTGGCCACATTTG+TGG | + | chr7_2:84057876-84057895 | None:intergenic | 60.0% | |
| ! | GGAGATGGTGGTCGCTGTTC+CGG | + | chr7_2:84057897-84057916 | None:intergenic | 60.0% |
| CAGGGAACTGCAATGGGGGT+GGG | - | chr7_2:84058208-84058227 | Msa1083730:intron | 60.0% | |
| ! | GTTGGGGGCATGCAGTCCAC+TGG | - | chr7_2:84057273-84057292 | Msa1083730:intron | 65.0% |
| TGACCCAGCTGAGCTCCAGC+AGG | + | chr7_2:84057303-84057322 | None:intergenic | 65.0% | |
| ! | GATGGTGGTCGCTGTTCCGG+AGG | + | chr7_2:84057894-84057913 | None:intergenic | 65.0% |
| GCAGGGAACTGCAATGGGGG+TGG | - | chr7_2:84058207-84058226 | Msa1083730:intron | 65.0% | |
| GGTCGCTGTTCCGGAGGCTG+TGG | + | chr7_2:84057888-84057907 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84055844 | 84058540 | 84055844 | ID=Msa1083730;Name=Msa1083730 |
| chr7_2 | mRNA | 84055844 | 84058540 | 84055844 | ID=Msa1083730-mRNA-1;Parent=Msa1083730;Name=Msa1083730-mRNA-1;_AED=0.01;_eAED=0.01;_QI=106|1|1|1|0|0|4|359|260 |
| chr7_2 | exon | 84055844 | 84056180 | 84055844 | ID=Msa1083730-mRNA-1:exon:22281;Parent=Msa1083730-mRNA-1 |
| chr7_2 | exon | 84056436 | 84057241 | 84056436 | ID=Msa1083730-mRNA-1:exon:22280;Parent=Msa1083730-mRNA-1 |
| chr7_2 | exon | 84058158 | 84058200 | 84058158 | ID=Msa1083730-mRNA-1:exon:22279;Parent=Msa1083730-mRNA-1 |
| chr7_2 | exon | 84058479 | 84058540 | 84058479 | ID=Msa1083730-mRNA-1:exon:22278;Parent=Msa1083730-mRNA-1 |
| chr7_2 | five_prime_UTR | 84058479 | 84058540 | 84058479 | ID=Msa1083730-mRNA-1:five_prime_utr;Parent=Msa1083730-mRNA-1 |
| chr7_2 | five_prime_UTR | 84058158 | 84058200 | 84058158 | ID=Msa1083730-mRNA-1:five_prime_utr;Parent=Msa1083730-mRNA-1 |
| chr7_2 | five_prime_UTR | 84057241 | 84057241 | 84057241 | ID=Msa1083730-mRNA-1:five_prime_utr;Parent=Msa1083730-mRNA-1 |
| chr7_2 | CDS | 84056458 | 84057240 | 84056458 | ID=Msa1083730-mRNA-1:cds;Parent=Msa1083730-mRNA-1 |
| chr7_2 | three_prime_UTR | 84056436 | 84056457 | 84056436 | ID=Msa1083730-mRNA-1:three_prime_utr;Parent=Msa1083730-mRNA-1 |
| chr7_2 | three_prime_UTR | 84055844 | 84056180 | 84055844 | ID=Msa1083730-mRNA-1:three_prime_utr;Parent=Msa1083730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
