Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084060 | XP_013450452.1 | 93.969 | 912 | 51 | 3 | 1 | 910 | 1 | 910 | 0.0 | 1748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084060 | A0A072UFB2 | 93.969 | 912 | 51 | 3 | 1 | 910 | 1 | 910 | 0.0 | 1748 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0647130 | Msa1084060 | 0.813899 | 2.026457e-51 | -8.615850e-47 |
| Msa0662600 | Msa1084060 | 0.918012 | 2.632215e-86 | -8.615850e-47 |
| Msa0754520 | Msa1084060 | 0.808327 | 3.271154e-50 | -8.615850e-47 |
| Msa1039930 | Msa1084060 | 0.894247 | 2.950179e-75 | -8.615850e-47 |
| Msa1065370 | Msa1084060 | 0.804500 | 2.097286e-49 | -8.615850e-47 |
| Msa1084060 | Msa1097640 | 0.809335 | 1.991122e-50 | -8.615850e-47 |
| Msa1084060 | Msa1124680 | -0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa1084060 | Msa1154690 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa1084060 | Msa1242240 | 0.801050 | 1.081155e-48 | -8.615850e-47 |
| Msa1084060 | Msa1320740 | 0.805662 | 1.197972e-49 | -8.615850e-47 |
| Msa1084060 | Msa1398920 | 0.912565 | 1.684372e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084060 | MtrunA17_Chr7g0271711 | 93.969 | 912 | 51 | 3 | 1 | 910 | 1 | 910 | 0.0 | 1748 |
| Msa1084060 | MtrunA17_Chr1g0192581 | 46.224 | 874 | 334 | 27 | 52 | 910 | 5 | 757 | 0.0 | 587 |
| Msa1084060 | MtrunA17_Chr2g0294831 | 32.918 | 963 | 543 | 28 | 2 | 908 | 6 | 921 | 1.09e-115 | 375 |
| Msa1084060 | MtrunA17_Chr7g0250831 | 26.047 | 430 | 257 | 15 | 491 | 908 | 555 | 935 | 3.10e-19 | 93.6 |
| Msa1084060 | MtrunA17_Chr6g0457761 | 25.306 | 490 | 264 | 20 | 449 | 908 | 461 | 878 | 2.63e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084060 | AT5G26910.4 | 31.189 | 917 | 528 | 21 | 1 | 908 | 4 | 826 | 1.42e-106 | 350 |
| Msa1084060 | AT5G26910.1 | 31.189 | 917 | 528 | 21 | 1 | 908 | 4 | 826 | 1.42e-106 | 350 |
| Msa1084060 | AT5G26910.3 | 31.189 | 917 | 527 | 21 | 1 | 908 | 4 | 825 | 3.05e-105 | 346 |
| Msa1084060 | AT3G58650.1 | 32.116 | 931 | 485 | 38 | 1 | 908 | 4 | 810 | 2.01e-93 | 313 |
| Msa1084060 | AT5G26910.2 | 32.997 | 594 | 336 | 12 | 1 | 586 | 4 | 543 | 2.45e-63 | 226 |
| Msa1084060 | AT3G05750.1 | 33.665 | 603 | 321 | 19 | 1 | 585 | 7 | 548 | 2.26e-52 | 197 |
| Msa1084060 | AT3G05750.1 | 36.970 | 165 | 94 | 2 | 746 | 909 | 644 | 799 | 2.73e-24 | 110 |
| Msa1084060 | AT3G05750.4 | 34.336 | 565 | 301 | 20 | 33 | 585 | 34 | 540 | 2.51e-49 | 188 |
| Msa1084060 | AT3G05750.4 | 36.970 | 165 | 94 | 2 | 746 | 909 | 636 | 791 | 3.71e-24 | 109 |
| Msa1084060 | AT3G05750.3 | 33.598 | 503 | 268 | 19 | 91 | 585 | 1 | 445 | 5.57e-43 | 167 |
| Msa1084060 | AT3G05750.3 | 36.970 | 165 | 94 | 2 | 746 | 909 | 541 | 696 | 2.68e-24 | 109 |
| Msa1084060 | AT3G05750.2 | 33.598 | 503 | 268 | 19 | 91 | 585 | 1 | 445 | 5.57e-43 | 167 |
| Msa1084060 | AT3G05750.2 | 36.970 | 165 | 94 | 2 | 746 | 909 | 541 | 696 | 2.68e-24 | 109 |
Find 234 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGTTTGTATTTGGTTTC+TGG | 0.052036 | 7_2:+84324758 | None:intergenic |
| AATAATAATTTATCGAAATT+TGG | 0.105688 | 7_2:+84326692 | None:intergenic |
| ACTTGGCAACACAGAGTTTA+TGG | 0.185619 | 7_2:-84322762 | Msa1084060:CDS |
| ACAATATTATGACCACTTAT+TGG | 0.198103 | 7_2:-84322155 | Msa1084060:three_prime_UTR |
| GTGAATCAGATTCGTTTATC+TGG | 0.198909 | 7_2:+84322927 | None:intergenic |
| AACTCGTGTTGTCGGCTTAT+TGG | 0.224076 | 7_2:+84324627 | None:intergenic |
| GGCAATGCTCGGTTTGTATT+TGG | 0.230061 | 7_2:+84324751 | None:intergenic |
| TCAAAGCTCTTCCATGTCTA+TGG | 0.251505 | 7_2:-84322879 | Msa1084060:CDS |
| CAATGGTTTCAAATGGAAAT+AGG | 0.279755 | 7_2:-84324837 | Msa1084060:CDS |
| GGAATCAAGGGCACATAAAA+TGG | 0.292716 | 7_2:-84325349 | Msa1084060:CDS |
| TTGAGAAATATTATGTGTTT+TGG | 0.295276 | 7_2:+84324483 | None:intergenic |
| AAATTGCATACATTGGATAA+TGG | 0.303822 | 7_2:-84326639 | Msa1084060:five_prime_UTR |
| TTTGAAGAGTTGCCATTGTT+TGG | 0.325053 | 7_2:+84325030 | None:intergenic |
| CAATATTATGACCACTTATT+GGG | 0.325488 | 7_2:-84322154 | Msa1084060:three_prime_UTR |
| ATGTCAATGTTCAGCCTAAA+AGG | 0.330024 | 7_2:-84324549 | Msa1084060:CDS |
| TGTCATGAGAATAAACTTCT+AGG | 0.330795 | 7_2:+84321954 | None:intergenic |
| AATAACCTATTGTGAGTAAC+TGG | 0.338823 | 7_2:+84325264 | None:intergenic |
| ATTTATCGAAATTTGGAAAA+GGG | 0.347167 | 7_2:+84326699 | None:intergenic |
| TTCATCTTGTTCCATGGTAT+TGG | 0.348152 | 7_2:+84324000 | None:intergenic |
| TTATTATTTGTTTCGATTTG+CGG | 0.349974 | 7_2:-84326674 | Msa1084060:five_prime_UTR |
| GTTTCTTTAGCCTGTTTGAT+TGG | 0.353033 | 7_2:-84326316 | Msa1084060:CDS |
| ATTAATTTGCCAATGGTTAC+CGG | 0.354089 | 7_2:+84322095 | None:intergenic |
| TAAAACTCTATTCCTCGTAT+AGG | 0.354262 | 7_2:+84325149 | None:intergenic |
| TCCAACAGATCAAAGAGATT+TGG | 0.354587 | 7_2:+84322698 | None:intergenic |
| TGATAAAGAGCTTAGTTATA+TGG | 0.359210 | 7_2:-84322121 | Msa1084060:three_prime_UTR |
| TTAACAAGTAAAGGAAAATC+AGG | 0.359427 | 7_2:-84324904 | Msa1084060:CDS |
| AAATCATTTCTTTCATGATC+AGG | 0.359480 | 7_2:+84324418 | None:intergenic |
| AATTGCATACATTGGATAAT+GGG | 0.359846 | 7_2:-84326638 | Msa1084060:five_prime_UTR |
| TACCGGAATCAAAGTTCTAT+AGG | 0.363901 | 7_2:-84325775 | Msa1084060:CDS |
| TCTTGATTTGAAAGAGAGAT+TGG | 0.364775 | 7_2:-84325094 | Msa1084060:CDS |
| GTGGAAGGGTTTCTCGTATA+AGG | 0.366604 | 7_2:-84326543 | Msa1084060:intron |
| TGAATTGATGTCACCCATCT+AGG | 0.368625 | 7_2:+84322536 | None:intergenic |
| TTGAAGAGTTGCCATTGTTT+GGG | 0.374946 | 7_2:+84325031 | None:intergenic |
| AAAACTCTATTCCTCGTATA+GGG | 0.378718 | 7_2:+84325150 | None:intergenic |
| AATGACATGAGCACTGGATA+TGG | 0.378953 | 7_2:-84322425 | Msa1084060:CDS |
| GATTTGGTGTTGACTCTCTT+GGG | 0.382883 | 7_2:-84324225 | Msa1084060:CDS |
| GCCAAATCTCTTTGATCTGT+TGG | 0.383800 | 7_2:-84322699 | Msa1084060:CDS |
| ACTTCATAAACACTACATAA+TGG | 0.384326 | 7_2:+84322275 | None:intergenic |
| GTCAACACCAAATCTAGTTC+TGG | 0.386085 | 7_2:+84324234 | None:intergenic |
| GTTGCAAATCATGGCCTAGA+TGG | 0.388615 | 7_2:-84322550 | Msa1084060:CDS |
| TTAAGTCGGAGAAGTCTTCT+TGG | 0.388727 | 7_2:-84325380 | Msa1084060:CDS |
| TGGTTTGACTTAATCTCATT+CGG | 0.390079 | 7_2:+84324793 | None:intergenic |
| CATCAACTGCAGAAGTTTCA+AGG | 0.394024 | 7_2:-84325823 | Msa1084060:intron |
| AGATTTGGTGTTGACTCTCT+TGG | 0.399113 | 7_2:-84324226 | Msa1084060:CDS |
| TACATTGGATAATGGGTGTT+TGG | 0.400505 | 7_2:-84326631 | Msa1084060:five_prime_UTR |
| ATTACATGAGCTGCATTCTT+CGG | 0.400753 | 7_2:+84325210 | None:intergenic |
| TAGAAACTTGGAAGATGTAA+TGG | 0.401841 | 7_2:-84322465 | Msa1084060:CDS |
| AGAAAACCATTACTCTTGAT+TGG | 0.403562 | 7_2:+84325237 | None:intergenic |
| GTACCAGCACATTGCCATTA+CGG | 0.403636 | 7_2:+84324710 | None:intergenic |
| CTAGATCTCAAACCAGTAGA+AGG | 0.406206 | 7_2:+84324055 | None:intergenic |
| GAAGATGAAACTCGTGTTGT+CGG | 0.408487 | 7_2:+84324619 | None:intergenic |
| AATCTCGTAAGAAGCTCGTT+TGG | 0.415531 | 7_2:-84326286 | Msa1084060:CDS |
| AGTAGCTAGACTAATGGGTT+TGG | 0.415757 | 7_2:-84325541 | Msa1084060:CDS |
| TTCTGTCAGTGAAAGTTACT+TGG | 0.418753 | 7_2:-84323515 | Msa1084060:CDS |
| GTTTCTGGCTCCTTGTGAGC+TGG | 0.419501 | 7_2:+84324773 | None:intergenic |
| CCATTCCAGTTACTCACAAT+AGG | 0.420132 | 7_2:-84325269 | Msa1084060:CDS |
| ATCTAGCATGGAAGAATAAA+CGG | 0.422941 | 7_2:+84322970 | None:intergenic |
| TTTATGTGCCCTTGATTCCA+TGG | 0.428294 | 7_2:+84325353 | None:intergenic |
| TGATGCATTGAGTGTCTTGT+TGG | 0.428531 | 7_2:-84324143 | Msa1084060:CDS |
| CTCGGGCACACTTCTCTTCA+AGG | 0.429593 | 7_2:+84324288 | None:intergenic |
| TCATCTTCAGAAAGTTCTAC+TGG | 0.430240 | 7_2:-84324604 | Msa1084060:CDS |
| AAGGTGTTGTTGTTGTCACT+TGG | 0.430294 | 7_2:+84326843 | None:intergenic |
| TAGATAAAGGTGGATGAGAA+TGG | 0.432322 | 7_2:-84325645 | Msa1084060:CDS |
| ATGGAAACCAGAACTAGATT+TGG | 0.433236 | 7_2:-84324241 | Msa1084060:CDS |
| GGAATGGGTTTAGCCGACTT+TGG | 0.433498 | 7_2:+84325285 | None:intergenic |
| TATTCTCATTTAACAAGTAA+AGG | 0.433553 | 7_2:-84324913 | Msa1084060:CDS |
| ACCGGAATCAAAGTTCTATA+GGG | 0.434864 | 7_2:-84325774 | Msa1084060:intron |
| GGGTTAGTAGCTAGACTAAT+GGG | 0.436466 | 7_2:-84325546 | Msa1084060:CDS |
| GAAGAGGGGTCAGAGGTTGA+AGG | 0.439614 | 7_2:-84322371 | Msa1084060:CDS |
| ATGATTAACATTACCAGGTA+AGG | 0.444021 | 7_2:+84326253 | None:intergenic |
| GCAAGACAAAGCATCCAGTA+TGG | 0.444703 | 7_2:-84324029 | Msa1084060:CDS |
| AATTTATCGAAATTTGGAAA+AGG | 0.444907 | 7_2:+84326698 | None:intergenic |
| AGAAGGCTCCTCTGAGATTA+CGG | 0.445668 | 7_2:+84324072 | None:intergenic |
| GAGCTTAGTTATATGGTAAC+CGG | 0.445862 | 7_2:-84322114 | Msa1084060:three_prime_UTR |
| AATGAAAGTGGAAATGATCT+AGG | 0.445864 | 7_2:-84323574 | Msa1084060:CDS |
| TCATGCTTCTCATTATAATG+AGG | 0.446452 | 7_2:-84325457 | Msa1084060:CDS |
| ATTTAGAATTCCAATCAAAC+AGG | 0.448534 | 7_2:+84326306 | None:intergenic |
| TTTGAAATCTCTTGAGTGAC+TGG | 0.449586 | 7_2:+84325322 | None:intergenic |
| CAAAGGTACATCATCATTCA+AGG | 0.450037 | 7_2:-84324974 | Msa1084060:CDS |
| TTGTTGGAAGTTGCAAATCA+TGG | 0.451707 | 7_2:-84322559 | Msa1084060:CDS |
| ATCTCAGAGGAGCCTTCTAC+TGG | 0.456510 | 7_2:-84324067 | Msa1084060:CDS |
| CTATTGTGAGTAACTGGAAT+GGG | 0.457459 | 7_2:+84325270 | None:intergenic |
| AACTCTTCAAATTGTAAGCC+TGG | 0.458250 | 7_2:-84325018 | Msa1084060:CDS |
| GGTATTGGTGTTAACCATAC+TGG | 0.458605 | 7_2:+84324015 | None:intergenic |
| GGAAAATCTAGAGACCTTAC+CGG | 0.458686 | 7_2:-84325792 | Msa1084060:CDS |
| GACAGTGAAGACAGTGCATA+TGG | 0.458972 | 7_2:-84323493 | Msa1084060:intron |
| TTGTACAGACATCAGAAGTA+AGG | 0.461314 | 7_2:-84323621 | Msa1084060:intron |
| CTGAATGTGAGCACAAAAGA+AGG | 0.467211 | 7_2:-84326745 | Msa1084060:five_prime_UTR |
| GCGGCTGCTAAGATAATTGA+TGG | 0.467501 | 7_2:-84325183 | Msa1084060:CDS |
| TCATCAGTTTGTAGTGATGA+GGG | 0.470024 | 7_2:-84325588 | Msa1084060:CDS |
| CGGGTTAGTAGCTAGACTAA+TGG | 0.470161 | 7_2:-84325547 | Msa1084060:CDS |
| TTTATCGAAATTTGGAAAAG+GGG | 0.473251 | 7_2:+84326700 | None:intergenic |
| TGCTGATTCATGTTAAGCAC+TGG | 0.476068 | 7_2:+84323920 | None:intergenic |
| TAAGTCGGAGAAGTCTTCTT+GGG | 0.478430 | 7_2:-84325379 | Msa1084060:CDS |
| TTCCATCACTTGCTCGGCAG+AGG | 0.481154 | 7_2:+84324258 | None:intergenic |
| CAAAGCTCTTCCATGTCTAT+GGG | 0.483022 | 7_2:-84322878 | Msa1084060:CDS |
| TTTGGATTCTTTGCCAACTT+CGG | 0.483220 | 7_2:-84325523 | Msa1084060:CDS |
| TTTGTAGTGATGAGGGGTGT+GGG | 0.483558 | 7_2:-84325581 | Msa1084060:CDS |
| TTATAATAAATTGCATACAT+TGG | 0.486264 | 7_2:-84326646 | Msa1084060:five_prime_UTR |
| AGAGATACAATGGTTTCAAA+TGG | 0.487273 | 7_2:-84324844 | Msa1084060:CDS |
| CTCGGCAGAGGATAGTGACT+CGG | 0.487665 | 7_2:+84324270 | None:intergenic |
| CATGCTTCTCATTATAATGA+GGG | 0.487956 | 7_2:-84325456 | Msa1084060:CDS |
| TGATCAGGACTTCTTGCCTC+AGG | 0.489473 | 7_2:+84324433 | None:intergenic |
| TTTCAAATCAAGAATTCTCA+AGG | 0.489682 | 7_2:+84325104 | None:intergenic |
| TGAATCAGATTCGTTTATCT+GGG | 0.491141 | 7_2:+84322928 | None:intergenic |
| TGAGCACTGGATATGGGAAA+TGG | 0.491726 | 7_2:-84322418 | Msa1084060:CDS |
| TGGAACAATCAAACCTTACC+TGG | 0.493911 | 7_2:-84326266 | Msa1084060:intron |
| GAGAACCATCAGAGTACATC+AGG | 0.496191 | 7_2:-84322677 | Msa1084060:CDS |
| GAACATTTCATCTTGTTCCA+TGG | 0.496613 | 7_2:+84323994 | None:intergenic |
| GTCGACTAGCTTTCTAGACA+TGG | 0.496834 | 7_2:+84325053 | None:intergenic |
| ACCCTATAGAACTTTGATTC+CGG | 0.497405 | 7_2:+84325773 | None:intergenic |
| CTTGGGATGCCATGGAATCA+AGG | 0.497669 | 7_2:-84325362 | Msa1084060:CDS |
| CATGTCTATGGGGCAATATG+TGG | 0.498871 | 7_2:-84322867 | Msa1084060:CDS |
| TCTGTTTCTGACTGAGTGGA+AGG | 0.499092 | 7_2:-84326558 | Msa1084060:five_prime_UTR |
| TCACTCTAAGCTTGAAAGGA+AGG | 0.500517 | 7_2:-84322633 | Msa1084060:CDS |
| TTGTCTCCAATCAAGAGTAA+TGG | 0.505640 | 7_2:-84325243 | Msa1084060:CDS |
| AACTGCAGAAGTTTCAAGGC+AGG | 0.506503 | 7_2:-84325819 | Msa1084060:intron |
| AGGAAACAGTACAATTGTAC+AGG | 0.508439 | 7_2:+84322042 | None:intergenic |
| CTATTCCTCGTATAGGGCTG+AGG | 0.508725 | 7_2:+84325156 | None:intergenic |
| TGAGGGTGCTCTTCGTTCCA+TGG | 0.510083 | 7_2:-84325439 | Msa1084060:CDS |
| ATAATGAGAAGCATGAAAGT+TGG | 0.511372 | 7_2:+84325464 | None:intergenic |
| AGCTCACCGACGTCCGAAGT+TGG | 0.511646 | 7_2:+84325510 | None:intergenic |
| TTCAGAGCAAAGAGATCTGT+GGG | 0.512471 | 7_2:+84326763 | None:intergenic |
| GCCTAAAAGGTCAAGCTCTA+GGG | 0.513483 | 7_2:-84324536 | Msa1084060:CDS |
| TCTGGTTTCCATCACTTGCT+CGG | 0.514344 | 7_2:+84324252 | None:intergenic |
| AGCCTAAAAGGTCAAGCTCT+AGG | 0.514877 | 7_2:-84324537 | Msa1084060:CDS |
| GAATATGTACAGAAAATACT+TGG | 0.515552 | 7_2:-84322779 | Msa1084060:CDS |
| GAAGAATGCAGCTCATGTAA+TGG | 0.515627 | 7_2:-84325208 | Msa1084060:CDS |
| TTCATCAGTTTGTAGTGATG+AGG | 0.517539 | 7_2:-84325589 | Msa1084060:CDS |
| CCATCTTATTAATTTGCCAA+TGG | 0.518662 | 7_2:+84322088 | None:intergenic |
| GACATTGAAGCATTTGAAGA+GGG | 0.520513 | 7_2:-84322386 | Msa1084060:CDS |
| ATCCTCTGCCGAGCAAGTGA+TGG | 0.524003 | 7_2:-84324260 | Msa1084060:CDS |
| AAGAGGGGTCAGAGGTTGAA+GGG | 0.526933 | 7_2:-84322370 | Msa1084060:CDS |
| CCATTGGCAAATTAATAAGA+TGG | 0.529264 | 7_2:-84322088 | Msa1084060:three_prime_UTR |
| CTGTTTCTGACTGAGTGGAA+GGG | 0.530259 | 7_2:-84326557 | Msa1084060:five_prime_UTR |
| TCGGACGTCGGTGAGCTCTC+CGG | 0.532203 | 7_2:-84325504 | Msa1084060:CDS |
| GAAGACTTCTCCGACTTAAG+TGG | 0.533144 | 7_2:+84325384 | None:intergenic |
| ACTACATAATGGAAGCTACC+AGG | 0.534911 | 7_2:+84322286 | None:intergenic |
| GGGTGTGGGAGTAAAGCTCC+CGG | 0.536026 | 7_2:-84325567 | Msa1084060:CDS |
| ATGACATGAGCACTGGATAT+GGG | 0.538932 | 7_2:-84322424 | Msa1084060:CDS |
| AGATACTTCTTCATCTAGCA+TGG | 0.540273 | 7_2:+84322958 | None:intergenic |
| GTCTGCAATGACATGAGCAC+TGG | 0.540768 | 7_2:-84322431 | Msa1084060:CDS |
| AGTATTATACTCCCAATAAG+TGG | 0.544810 | 7_2:+84322143 | None:intergenic |
| ATAGAACTTTGATTCCGGTA+AGG | 0.546952 | 7_2:+84325778 | None:intergenic |
| AGTCCGAGTAATATAGTAAG+TGG | 0.550827 | 7_2:-84325618 | Msa1084060:CDS |
| GTTTGTAGTGATGAGGGGTG+TGG | 0.551029 | 7_2:-84325582 | Msa1084060:CDS |
| AGGTGTTGTTGTTGTCACTT+GGG | 0.551476 | 7_2:+84326844 | None:intergenic |
| ATGGGTTTAGCCGACTTTGG+AGG | 0.553218 | 7_2:+84325288 | None:intergenic |
| GATGGGTGACATCAATTCAA+AGG | 0.554306 | 7_2:-84322532 | Msa1084060:CDS |
| CATCAGTTTGTAGTGATGAG+GGG | 0.554353 | 7_2:-84325587 | Msa1084060:CDS |
| AAAACGTGTGCAAACCGTAA+TGG | 0.554411 | 7_2:-84324724 | Msa1084060:CDS |
| CATTAGTCTAGCTACTAACC+CGG | 0.555448 | 7_2:+84325548 | None:intergenic |
| AAGTTCTACTGGAGTCAGAA+AGG | 0.557721 | 7_2:-84324593 | Msa1084060:CDS |
| AGTCAGAAAGGCAACAAACA+AGG | 0.557842 | 7_2:-84324581 | Msa1084060:CDS |
| CCTATTGTGAGTAACTGGAA+TGG | 0.558950 | 7_2:+84325269 | None:intergenic |
| TTGCAAATCATGGCCTAGAT+GGG | 0.560806 | 7_2:-84322549 | Msa1084060:CDS |
| AAGATCACTCTAAGCTTGAA+AGG | 0.562316 | 7_2:-84322637 | Msa1084060:CDS |
| TCACTATCTATCATATGTGT+CGG | 0.564183 | 7_2:+84324163 | None:intergenic |
| ATGGCAGAAGAATTTGTCAT+GGG | 0.564588 | 7_2:-84322743 | Msa1084060:CDS |
| TGTAGCAGCAACAATGAAAG+TGG | 0.564981 | 7_2:-84323586 | Msa1084060:CDS |
| AGACTGTTTGATTGATGAGA+TGG | 0.565226 | 7_2:-84322339 | Msa1084060:CDS |
| GAAGTCTTCTTGGGATGCCA+TGG | 0.565368 | 7_2:-84325370 | Msa1084060:CDS |
| CACATATTGCCCCATAGACA+TGG | 0.565694 | 7_2:+84322868 | None:intergenic |
| CGTTCAAAGCAGAGATACAA+TGG | 0.565930 | 7_2:-84324854 | Msa1084060:CDS |
| CTGACAAAGAAACACTGAAG+TGG | 0.567776 | 7_2:-84322224 | Msa1084060:three_prime_UTR |
| TTGGGATGCCATGGAATCAA+GGG | 0.569801 | 7_2:-84325361 | Msa1084060:CDS |
| CAATTCTGTTTCTGACTGAG+TGG | 0.571548 | 7_2:-84326562 | Msa1084060:five_prime_UTR |
| TGAAATGTTGCCTCCAAAGT+CGG | 0.572372 | 7_2:-84325298 | Msa1084060:CDS |
| ATATGGTAACCGGTAACCAT+TGG | 0.573027 | 7_2:-84322104 | Msa1084060:three_prime_UTR |
| AGAAGTTTCAAGGCAGGGAA+AGG | 0.573539 | 7_2:-84325813 | Msa1084060:CDS |
| CAAAATAGTATGACTTCCAA+AGG | 0.573557 | 7_2:-84324673 | Msa1084060:CDS |
| TGCAGCTCATGTAATGGAGG+CGG | 0.575246 | 7_2:-84325202 | Msa1084060:CDS |
| TCGGGCACACTTCTCTTCAA+GGG | 0.577563 | 7_2:+84324289 | None:intergenic |
| GGAGCTGAATAGTGAAGCAC+CGG | 0.578587 | 7_2:+84325485 | None:intergenic |
| TGAAAACAATACTTCTTCAG+AGG | 0.580060 | 7_2:+84322022 | None:intergenic |
| TATGGCAGAAGAATTTGTCA+TGG | 0.581714 | 7_2:-84322744 | Msa1084060:CDS |
| TTCAAATCAAGAATTCTCAA+GGG | 0.586162 | 7_2:+84325105 | None:intergenic |
| TGACATTGAAGCATTTGAAG+AGG | 0.587741 | 7_2:-84322387 | Msa1084060:CDS |
| CTACATAATGGAAGCTACCA+GGG | 0.593223 | 7_2:+84322287 | None:intergenic |
| TTAAGTCAAACCAGCTCACA+AGG | 0.593311 | 7_2:-84324783 | Msa1084060:CDS |
| CTTAAACACACCACTTAAGT+CGG | 0.594149 | 7_2:-84325394 | Msa1084060:CDS |
| CGCACGACGATAGTCATCCA+TGG | 0.595188 | 7_2:+84325422 | None:intergenic |
| TCGCCACTTACTATATTACT+CGG | 0.596350 | 7_2:+84325615 | None:intergenic |
| ACATTGAAGCATTTGAAGAG+GGG | 0.596973 | 7_2:-84322385 | Msa1084060:CDS |
| AAATTAGAACTCCTCTCACC+AGG | 0.597036 | 7_2:+84325000 | None:intergenic |
| CACTTGAAAATGAAGTGACA+TGG | 0.597864 | 7_2:-84322907 | Msa1084060:CDS |
| GTGGCTGTCACACAAATATG+TGG | 0.598071 | 7_2:-84322848 | Msa1084060:CDS |
| AATATGTGGAACACCAAACA+TGG | 0.598654 | 7_2:-84322834 | Msa1084060:CDS |
| TAACATGAATCAGCAACTGC+AGG | 0.601446 | 7_2:-84323912 | Msa1084060:intron |
| TATTCCTCGTATAGGGCTGA+GGG | 0.601841 | 7_2:+84325157 | None:intergenic |
| TGTACAGACATCAGAAGTAA+GGG | 0.605254 | 7_2:-84323620 | Msa1084060:intron |
| AGCATTTGAAGAGGGGTCAG+AGG | 0.607202 | 7_2:-84322378 | Msa1084060:CDS |
| TCGGCAGAGGATAGTGACTC+GGG | 0.608484 | 7_2:+84324271 | None:intergenic |
| CAGTACAATTGTACAGGGGA+GGG | 0.610328 | 7_2:+84322048 | None:intergenic |
| GGTGACATCAATTCAAAGGA+AGG | 0.612539 | 7_2:-84322528 | Msa1084060:CDS |
| ACAGTACAATTGTACAGGGG+AGG | 0.617088 | 7_2:+84322047 | None:intergenic |
| TCTTTGCCAACTTCGGACGT+CGG | 0.617948 | 7_2:-84325516 | Msa1084060:CDS |
| ACTGCAGAAGTTTCAAGGCA+GGG | 0.617971 | 7_2:-84325818 | Msa1084060:intron |
| ACATCAGGTACATCATATTG+TGG | 0.620205 | 7_2:-84322662 | Msa1084060:CDS |
| ATTCAGAGCAAAGAGATCTG+TGG | 0.625950 | 7_2:+84326762 | None:intergenic |
| AGAGGGGTCAGAGGTTGAAG+GGG | 0.626738 | 7_2:-84322369 | Msa1084060:CDS |
| AATATTGTAGTACTGCCCAA+TGG | 0.627557 | 7_2:+84322170 | None:intergenic |
| TGAATGTGAGCACAAAAGAA+GGG | 0.627760 | 7_2:-84326744 | Msa1084060:five_prime_UTR |
| AAACCGTAATGGCAATGTGC+TGG | 0.628053 | 7_2:-84324713 | Msa1084060:CDS |
| CTATCGCTGTTGTTCAAGTG+AGG | 0.630068 | 7_2:-84323945 | Msa1084060:CDS |
| TCGACTAGCTTTCTAGACAT+GGG | 0.631265 | 7_2:+84325054 | None:intergenic |
| AAACTTGGAAGATGTAATGG+TGG | 0.636219 | 7_2:-84322462 | Msa1084060:CDS |
| AAAGGTACATCATCATTCAA+GGG | 0.636259 | 7_2:-84324973 | Msa1084060:CDS |
| TTTGGCAGATGAGTTATACA+GGG | 0.636557 | 7_2:-84322501 | Msa1084060:CDS |
| GGAAACAGTACAATTGTACA+GGG | 0.636886 | 7_2:+84322043 | None:intergenic |
| ATGTACCTGATGTACTCTGA+TGG | 0.636993 | 7_2:+84322672 | None:intergenic |
| ACATGAGCTGCATTCTTCGG+CGG | 0.637093 | 7_2:+84325213 | None:intergenic |
| AAGCTAGTCGACCCAAACAA+TGG | 0.638219 | 7_2:-84325042 | Msa1084060:CDS |
| AAGTAACTTTCACTGACAGA+AGG | 0.642170 | 7_2:+84323517 | None:intergenic |
| GAATGCAGCTCATGTAATGG+AGG | 0.646804 | 7_2:-84325205 | Msa1084060:CDS |
| GTCAGAAAGGCAACAAACAA+GGG | 0.647142 | 7_2:-84324580 | Msa1084060:CDS |
| TAGGGCAATCAATAACCGAA+AGG | 0.649794 | 7_2:-84324518 | Msa1084060:CDS |
| TTTCAAAATATCAAGCGACA+TGG | 0.652102 | 7_2:-84322807 | Msa1084060:CDS |
| TATGGTTAACACCAATACCA+TGG | 0.655461 | 7_2:-84324011 | Msa1084060:CDS |
| GGTGTGGGAGTAAAGCTCCC+GGG | 0.662258 | 7_2:-84325566 | Msa1084060:CDS |
| AGAAGTTTATTCTCATGACA+CGG | 0.665014 | 7_2:-84321951 | Msa1084060:three_prime_UTR |
| TGACAGCAGAGGTGTTCCTG+AGG | 0.669852 | 7_2:-84324449 | Msa1084060:CDS |
| CAGAGCAAAGAGATCTGTGG+GGG | 0.670378 | 7_2:+84326765 | None:intergenic |
| CAAATTGTAAGCCTGGTGAG+AGG | 0.672573 | 7_2:-84325011 | Msa1084060:CDS |
| TACATAATGGAAGCTACCAG+GGG | 0.677308 | 7_2:+84322288 | None:intergenic |
| ATTAGTCTAGCTACTAACCC+GGG | 0.683901 | 7_2:+84325549 | None:intergenic |
| AAAGCTCTTCCATGTCTATG+GGG | 0.687339 | 7_2:-84322877 | Msa1084060:CDS |
| GAAGCCCTCAGCCCTATACG+AGG | 0.704584 | 7_2:-84325161 | Msa1084060:CDS |
| CATGGATGACTATCGTCGTG+CGG | 0.707839 | 7_2:-84325421 | Msa1084060:CDS |
| TCAGTGTACCGTAATCTCAG+AGG | 0.719931 | 7_2:-84324080 | Msa1084060:CDS |
| TCAGAGCAAAGAGATCTGTG+GGG | 0.751069 | 7_2:+84326764 | None:intergenic |
| GAAACAGTACAATTGTACAG+GGG | 0.785668 | 7_2:+84322044 | None:intergenic |
| ACATAATGGAAGCTACCAGG+GGG | 0.795203 | 7_2:+84322289 | None:intergenic |
| TCTGAGATTACGGTACACTG+AGG | 0.805122 | 7_2:+84324082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATTTATCGAAATT+TGG | + | chr7_2:84322111-84322130 | None:intergenic | 10.0% |
| !!! | ATTTTTGAAAAATGTATAAA+AGG | + | chr7_2:84325450-84325469 | None:intergenic | 10.0% |
| !!! | CAATTTTATATGTATTATAA+GGG | + | chr7_2:84325774-84325793 | None:intergenic | 10.0% |
| !! | TTATAATAAATTGCATACAT+TGG | - | chr7_2:84322154-84322173 | Msa1084060:three_prime_UTR | 15.0% |
| !! | AATAAGCTAAAAACATATTA+TGG | + | chr7_2:84322756-84322775 | None:intergenic | 15.0% |
| !!! | TTTGATTTATTTTTTTGGTT+TGG | - | chr7_2:84323117-84323136 | Msa1084060:intron | 15.0% |
| !!! | ATTGAAATTGTTTTAGATAA+AGG | - | chr7_2:84323142-84323161 | Msa1084060:intron | 15.0% |
| !!! | GTAAAATAATTTTACACTAA+AGG | + | chr7_2:84325547-84325566 | None:intergenic | 15.0% |
| !!! | GCAATTTTATATGTATTATA+AGG | + | chr7_2:84325775-84325794 | None:intergenic | 15.0% |
| !!! | ATTGATATTAAATTGTTTTG+TGG | + | chr7_2:84326814-84326833 | None:intergenic | 15.0% |
| !! | ATTTATCGAAATTTGGAAAA+GGG | + | chr7_2:84322104-84322123 | None:intergenic | 20.0% |
| !! | AATTTATCGAAATTTGGAAA+AGG | + | chr7_2:84322105-84322124 | None:intergenic | 20.0% |
| !!! | TTATTATTTGTTTCGATTTG+CGG | - | chr7_2:84322126-84322145 | Msa1084060:three_prime_UTR | 20.0% |
| !!! | ATATAGGAAAAAAGAAGTAT+TGG | - | chr7_2:84322434-84322453 | Msa1084060:CDS | 20.0% |
| !! | TATTCTCATTTAACAAGTAA+AGG | - | chr7_2:84323887-84323906 | Msa1084060:intron | 20.0% |
| !!! | AAATATTATGTGTTTTGGAT+GGG | + | chr7_2:84324315-84324334 | None:intergenic | 20.0% |
| !!! | TTGAGAAATATTATGTGTTT+TGG | + | chr7_2:84324320-84324339 | None:intergenic | 20.0% |
| !!! | AGTTGTAAAATTGCATTTTA+TGG | + | chr7_2:84324419-84324438 | None:intergenic | 20.0% |
| !! | AACAATTATTCTCAGTAAAT+TGG | + | chr7_2:84325049-84325068 | None:intergenic | 20.0% |
| !! | CATATTTGTTTATCAATGTT+TGG | - | chr7_2:84325703-84325722 | Msa1084060:intron | 20.0% |
| !!! | TTTGTCAGAATTTTAATCAA+TGG | + | chr7_2:84326564-84326583 | None:intergenic | 20.0% |
| ! | TTTATCGAAATTTGGAAAAG+GGG | + | chr7_2:84322103-84322122 | None:intergenic | 25.0% |
| ! | AAATTGCATACATTGGATAA+TGG | - | chr7_2:84322161-84322180 | Msa1084060:three_prime_UTR | 25.0% |
| ! | AATTGCATACATTGGATAAT+GGG | - | chr7_2:84322162-84322181 | Msa1084060:three_prime_UTR | 25.0% |
| ! | AATTCGTTAGATTTCAGATT+TGG | - | chr7_2:84322325-84322344 | Msa1084060:CDS | 25.0% |
| ! | ATTCGTTAGATTTCAGATTT+GGG | - | chr7_2:84322326-84322345 | Msa1084060:CDS | 25.0% |
| ! | AACAGTATCAAAATAGTGAA+AGG | + | chr7_2:84322390-84322409 | None:intergenic | 25.0% |
| !!! | TTCACTATTTTGATACTGTT+TGG | - | chr7_2:84322390-84322409 | Msa1084060:CDS | 25.0% |
| !!! | GAAAAAAGAAGTATTGGAAA+TGG | - | chr7_2:84322440-84322459 | Msa1084060:CDS | 25.0% |
| !! | ATTTAGAATTCCAATCAAAC+AGG | + | chr7_2:84322497-84322516 | None:intergenic | 25.0% |
| ! | ATAGCTTACACGAAAATATT+TGG | - | chr7_2:84322813-84322832 | Msa1084060:CDS | 25.0% |
| ! | TATGTAAGTTTATCCAAACA+TGG | - | chr7_2:84322896-84322915 | Msa1084060:CDS | 25.0% |
| !! | GTAACAGAAACATTTAGAAT+AGG | + | chr7_2:84322958-84322977 | None:intergenic | 25.0% |
| !!! | GAAATTGTTTTAGATAAAGG+TGG | - | chr7_2:84323145-84323164 | Msa1084060:intron | 25.0% |
| ! | TTCAAATCAAGAATTCTCAA+GGG | + | chr7_2:84323698-84323717 | None:intergenic | 25.0% |
| ! | TTTCAAATCAAGAATTCTCA+AGG | + | chr7_2:84323699-84323718 | None:intergenic | 25.0% |
| ! | TTAACAAGTAAAGGAAAATC+AGG | - | chr7_2:84323896-84323915 | Msa1084060:intron | 25.0% |
| !!! | TTTTGAAGTTGATTTACCTT+TGG | + | chr7_2:84324146-84324165 | None:intergenic | 25.0% |
| !!! | AATATTATGTGTTTTGGATG+GGG | + | chr7_2:84324314-84324333 | None:intergenic | 25.0% |
| !!! | GAAATATTATGTGTTTTGGA+TGG | + | chr7_2:84324316-84324335 | None:intergenic | 25.0% |
| ! | AAATCATTTCTTTCATGATC+AGG | + | chr7_2:84324385-84324404 | None:intergenic | 25.0% |
| !! | AAATGCAATTTTACAACTGA+TGG | - | chr7_2:84324421-84324440 | Msa1084060:CDS | 25.0% |
| !!! | ATAGCAATAATTTTTTGGGA+TGG | + | chr7_2:84324615-84324634 | None:intergenic | 25.0% |
| !!! | GGAGATAGCAATAATTTTTT+GGG | + | chr7_2:84324619-84324638 | None:intergenic | 25.0% |
| ! | ATACTCAGTTTCATATGTAA+TGG | - | chr7_2:84324936-84324955 | Msa1084060:CDS | 25.0% |
| !!! | ATATTGTTTTGACTATGTGT+TGG | + | chr7_2:84325019-84325038 | None:intergenic | 25.0% |
| !! | TGAGTCTAATTTTCCAAATT+AGG | - | chr7_2:84325093-84325112 | Msa1084060:CDS | 25.0% |
| ! | TAATTATCTTTCCCTTCAAT+GGG | - | chr7_2:84325341-84325360 | Msa1084060:CDS | 25.0% |
| !!! | CTTTGAGATCAAAACAAATA+AGG | + | chr7_2:84325367-84325386 | None:intergenic | 25.0% |
| ! | GTAAGAAGTAAAAAGTAAAC+AGG | + | chr7_2:84325400-84325419 | None:intergenic | 25.0% |
| ! | AAAAATGTATAAAAGGCTAG+AGG | + | chr7_2:84325443-84325462 | None:intergenic | 25.0% |
| ! | AATCACATCTCATATATGTT+AGG | - | chr7_2:84325578-84325597 | Msa1084060:CDS | 25.0% |
| !!! | ATTTTGAAATCTACCATGTT+TGG | + | chr7_2:84325982-84326001 | None:intergenic | 25.0% |
| ! | GAATATGTACAGAAAATACT+TGG | - | chr7_2:84326021-84326040 | Msa1084060:intron | 25.0% |
| ! | ACTTCATAAACACTACATAA+TGG | + | chr7_2:84326528-84326547 | None:intergenic | 25.0% |
| ! | ACAATATTATGACCACTTAT+TGG | - | chr7_2:84326645-84326664 | Msa1084060:five_prime_UTR | 25.0% |
| ! | CAATATTATGACCACTTATT+GGG | - | chr7_2:84326646-84326665 | Msa1084060:five_prime_UTR | 25.0% |
| ! | TGATAAAGAGCTTAGTTATA+TGG | - | chr7_2:84326679-84326698 | Msa1084060:five_prime_UTR | 25.0% |
| !!! | GATACTGTTTGGTAATGTTT+TGG | - | chr7_2:84322401-84322420 | Msa1084060:CDS | 30.0% |
| !!! | TTTTGGTTTGACTGTGATAT+AGG | - | chr7_2:84322418-84322437 | Msa1084060:CDS | 30.0% |
| ATGGAGAAAAAACGTTCAAA+AGG | - | chr7_2:84322459-84322478 | Msa1084060:CDS | 30.0% | |
| ATGATTAACATTACCAGGTA+AGG | + | chr7_2:84322550-84322569 | None:intergenic | 30.0% | |
| !! | AAACCAAACAGGTTCTAAAT+AGG | + | chr7_2:84322654-84322673 | None:intergenic | 30.0% |
| TCAAATAAGTCAAACCAAAC+AGG | + | chr7_2:84322665-84322684 | None:intergenic | 30.0% | |
| !! | TGTTTGGTTTGACTTATTTG+AGG | - | chr7_2:84322664-84322683 | Msa1084060:CDS | 30.0% |
| GAATGATATATGACCATGTT+TGG | + | chr7_2:84322912-84322931 | None:intergenic | 30.0% | |
| ! | ATAATGAGAAGCATGAAAGT+TGG | + | chr7_2:84323339-84323358 | None:intergenic | 30.0% |
| TCATGCTTCTCATTATAATG+AGG | - | chr7_2:84323343-84323362 | Msa1084060:intron | 30.0% | |
| CATGCTTCTCATTATAATGA+GGG | - | chr7_2:84323344-84323363 | Msa1084060:intron | 30.0% | |
| AATAACCTATTGTGAGTAAC+TGG | + | chr7_2:84323539-84323558 | None:intergenic | 30.0% | |
| AGAAAACCATTACTCTTGAT+TGG | + | chr7_2:84323566-84323585 | None:intergenic | 30.0% | |
| AAAACTCTATTCCTCGTATA+GGG | + | chr7_2:84323653-84323672 | None:intergenic | 30.0% | |
| TAAAACTCTATTCCTCGTAT+AGG | + | chr7_2:84323654-84323673 | None:intergenic | 30.0% | |
| ! | TCTTGATTTGAAAGAGAGAT+TGG | - | chr7_2:84323706-84323725 | Msa1084060:intron | 30.0% |
| !! | AGGAGTTCTAATTTTGACAA+AGG | - | chr7_2:84323809-84323828 | Msa1084060:intron | 30.0% |
| ! | AAAGGTACATCATCATTCAA+GGG | - | chr7_2:84323827-84323846 | Msa1084060:intron | 30.0% |
| AGAGATACAATGGTTTCAAA+TGG | - | chr7_2:84323956-84323975 | Msa1084060:CDS | 30.0% | |
| CAATGGTTTCAAATGGAAAT+AGG | - | chr7_2:84323963-84323982 | Msa1084060:CDS | 30.0% | |
| ! | TGGTTTGACTTAATCTCATT+CGG | + | chr7_2:84324010-84324029 | None:intergenic | 30.0% |
| CAAAATAGTATGACTTCCAA+AGG | - | chr7_2:84324127-84324146 | Msa1084060:CDS | 30.0% | |
| !! | ATATTATGTGTTTTGGATGG+GGG | + | chr7_2:84324313-84324332 | None:intergenic | 30.0% |
| !!! | CGGAGATAGCAATAATTTTT+TGG | + | chr7_2:84324620-84324639 | None:intergenic | 30.0% |
| TCACTATCTATCATATGTGT+CGG | + | chr7_2:84324640-84324659 | None:intergenic | 30.0% | |
| GGAAAATTAGACTCAGTAAA+TGG | + | chr7_2:84325088-84325107 | None:intergenic | 30.0% | |
| AATGAAAGTGGAAATGATCT+AGG | - | chr7_2:84325226-84325245 | Msa1084060:CDS | 30.0% | |
| CTAATTATCTTTCCCTTCAA+TGG | - | chr7_2:84325340-84325359 | Msa1084060:CDS | 30.0% | |
| AGATCATCATGTGATTTGAT+TGG | - | chr7_2:84325619-84325638 | Msa1084060:CDS | 30.0% | |
| GATCATCATGTGATTTGATT+GGG | - | chr7_2:84325620-84325639 | Msa1084060:CDS | 30.0% | |
| ! | TATTATAAGGGCATATGCTA+CGG | + | chr7_2:84325762-84325781 | None:intergenic | 30.0% |
| ATCTAGCATGGAAGAATAAA+CGG | + | chr7_2:84325833-84325852 | None:intergenic | 30.0% | |
| TGAATCAGATTCGTTTATCT+GGG | + | chr7_2:84325875-84325894 | None:intergenic | 30.0% | |
| TTTCAAAATATCAAGCGACA+TGG | - | chr7_2:84325993-84326012 | Msa1084060:intron | 30.0% | |
| ! | AGATGTGAAAAAGCTTTTGT+TGG | - | chr7_2:84326225-84326244 | Msa1084060:intron | 30.0% |
| ! | AATTCAAAGGAAGGACTTTT+TGG | - | chr7_2:84326281-84326300 | Msa1084060:CDS | 30.0% |
| !!! | GATGATGAGTTTTAGAAACT+TGG | - | chr7_2:84326323-84326342 | Msa1084060:CDS | 30.0% |
| TAGAAACTTGGAAGATGTAA+TGG | - | chr7_2:84326335-84326354 | Msa1084060:CDS | 30.0% | |
| AGTATTATACTCCCAATAAG+TGG | + | chr7_2:84326660-84326679 | None:intergenic | 30.0% | |
| !! | ATTAATTTGCCAATGGTTAC+CGG | + | chr7_2:84326708-84326727 | None:intergenic | 30.0% |
| !! | CCATCTTATTAATTTGCCAA+TGG | + | chr7_2:84326715-84326734 | None:intergenic | 30.0% |
| CCATTGGCAAATTAATAAGA+TGG | - | chr7_2:84326712-84326731 | Msa1084060:five_prime_UTR | 30.0% | |
| TGAAAACAATACTTCTTCAG+AGG | + | chr7_2:84326781-84326800 | None:intergenic | 30.0% | |
| TGTCATGAGAATAAACTTCT+AGG | + | chr7_2:84326849-84326868 | None:intergenic | 30.0% | |
| TGAATGTGAGCACAAAAGAA+GGG | - | chr7_2:84322056-84322075 | Msa1084060:three_prime_UTR | 35.0% | |
| !! | TACATTGGATAATGGGTGTT+TGG | - | chr7_2:84322169-84322188 | Msa1084060:three_prime_UTR | 35.0% |
| GTTTCTTTAGCCTGTTTGAT+TGG | - | chr7_2:84322484-84322503 | Msa1084060:CDS | 35.0% | |
| ATGGCATGATTAACATTACC+AGG | + | chr7_2:84322555-84322574 | None:intergenic | 35.0% | |
| AAGCTATCTTGTAGAGCTTA+TGG | + | chr7_2:84322780-84322799 | None:intergenic | 35.0% | |
| ATAGAACTTTGATTCCGGTA+AGG | + | chr7_2:84323025-84323044 | None:intergenic | 35.0% | |
| TACCGGAATCAAAGTTCTAT+AGG | - | chr7_2:84323025-84323044 | Msa1084060:intron | 35.0% | |
| ACCGGAATCAAAGTTCTATA+GGG | - | chr7_2:84323026-84323045 | Msa1084060:intron | 35.0% | |
| ACCCTATAGAACTTTGATTC+CGG | + | chr7_2:84323030-84323049 | None:intergenic | 35.0% | |
| AAAAGCAGACAGCAAAAAGT+GGG | + | chr7_2:84323065-84323084 | None:intergenic | 35.0% | |
| AAAAAGCAGACAGCAAAAAG+TGG | + | chr7_2:84323066-84323085 | None:intergenic | 35.0% | |
| TAGATAAAGGTGGATGAGAA+TGG | - | chr7_2:84323155-84323174 | Msa1084060:intron | 35.0% | |
| AGTCCGAGTAATATAGTAAG+TGG | - | chr7_2:84323182-84323201 | Msa1084060:intron | 35.0% | |
| TCGCCACTTACTATATTACT+CGG | + | chr7_2:84323188-84323207 | None:intergenic | 35.0% | |
| TTCATCAGTTTGTAGTGATG+AGG | - | chr7_2:84323211-84323230 | Msa1084060:intron | 35.0% | |
| TCATCAGTTTGTAGTGATGA+GGG | - | chr7_2:84323212-84323231 | Msa1084060:intron | 35.0% | |
| TTTGGATTCTTTGCCAACTT+CGG | - | chr7_2:84323277-84323296 | Msa1084060:intron | 35.0% | |
| CTTAAACACACCACTTAAGT+CGG | - | chr7_2:84323406-84323425 | Msa1084060:intron | 35.0% | |
| ! | TTTGAAATCTCTTGAGTGAC+TGG | + | chr7_2:84323481-84323500 | None:intergenic | 35.0% |
| CTATTGTGAGTAACTGGAAT+GGG | + | chr7_2:84323533-84323552 | None:intergenic | 35.0% | |
| TTGTCTCCAATCAAGAGTAA+TGG | - | chr7_2:84323557-84323576 | Msa1084060:CDS | 35.0% | |
| ATTACATGAGCTGCATTCTT+CGG | + | chr7_2:84323593-84323612 | None:intergenic | 35.0% | |
| !! | ACGAGGAATAGAGTTTTATC+AGG | - | chr7_2:84323656-84323675 | Msa1084060:intron | 35.0% |
| !! | AGGAATAGAGTTTTATCAGG+CGG | - | chr7_2:84323659-84323678 | Msa1084060:intron | 35.0% |
| TTGAAGAGTTGCCATTGTTT+GGG | + | chr7_2:84323772-84323791 | None:intergenic | 35.0% | |
| TTTGAAGAGTTGCCATTGTT+TGG | + | chr7_2:84323773-84323792 | None:intergenic | 35.0% | |
| AACTCTTCAAATTGTAAGCC+TGG | - | chr7_2:84323782-84323801 | Msa1084060:intron | 35.0% | |
| ! | CAAAGGTACATCATCATTCA+AGG | - | chr7_2:84323826-84323845 | Msa1084060:intron | 35.0% |
| !!! | TTGTTTTTGGCTTGCATTGT+AGG | + | chr7_2:84323926-84323945 | None:intergenic | 35.0% |
| !! | TCTGCTTTGAACGTTGTTTT+TGG | + | chr7_2:84323939-84323958 | None:intergenic | 35.0% |
| TCATCTTCAGAAAGTTCTAC+TGG | - | chr7_2:84324196-84324215 | Msa1084060:CDS | 35.0% | |
| ATGTCAATGTTCAGCCTAAA+AGG | - | chr7_2:84324251-84324270 | Msa1084060:CDS | 35.0% | |
| ! | AAGAAAAAGTATGACAGCAG+AGG | - | chr7_2:84324340-84324359 | Msa1084060:CDS | 35.0% |
| ATGGAAACCAGAACTAGATT+TGG | - | chr7_2:84324559-84324578 | Msa1084060:CDS | 35.0% | |
| TATGGTTAACACCAATACCA+TGG | - | chr7_2:84324789-84324808 | Msa1084060:CDS | 35.0% | |
| TTCATCTTGTTCCATGGTAT+TGG | + | chr7_2:84324803-84324822 | None:intergenic | 35.0% | |
| GAACATTTCATCTTGTTCCA+TGG | + | chr7_2:84324809-84324828 | None:intergenic | 35.0% | |
| !! | TTTTGACTATGTGTTGGACT+TGG | + | chr7_2:84325013-84325032 | None:intergenic | 35.0% |
| AAACTGCAGACAACCTAATT+TGG | + | chr7_2:84325109-84325128 | None:intergenic | 35.0% | |
| TTGTACAGACATCAGAAGTA+AGG | - | chr7_2:84325179-84325198 | Msa1084060:CDS | 35.0% | |
| TGTACAGACATCAGAAGTAA+GGG | - | chr7_2:84325180-84325199 | Msa1084060:CDS | 35.0% | |
| AAGTAACTTTCACTGACAGA+AGG | + | chr7_2:84325286-84325305 | None:intergenic | 35.0% | |
| TTCTGTCAGTGAAAGTTACT+TGG | - | chr7_2:84325285-84325304 | Msa1084060:CDS | 35.0% | |
| AACAAATAAGGCCCATTGAA+GGG | + | chr7_2:84325355-84325374 | None:intergenic | 35.0% | |
| AAACAAATAAGGCCCATTGA+AGG | + | chr7_2:84325356-84325375 | None:intergenic | 35.0% | |
| CTAACAAGTTTGTAACACAC+AGG | + | chr7_2:84325507-84325526 | None:intergenic | 35.0% | |
| CATGATGATCTCACTTTGTT+AGG | + | chr7_2:84325610-84325629 | None:intergenic | 35.0% | |
| CGGAAAAGCAACAAATTTCA+TGG | + | chr7_2:84325742-84325761 | None:intergenic | 35.0% | |
| GAAAACAGGAAGAAACTGAT+CGG | + | chr7_2:84325802-84325821 | None:intergenic | 35.0% | |
| ! | ATCAGTTTCTTCCTGTTTTC+AGG | - | chr7_2:84325802-84325821 | Msa1084060:CDS | 35.0% |
| AGATACTTCTTCATCTAGCA+TGG | + | chr7_2:84325845-84325864 | None:intergenic | 35.0% | |
| GTGAATCAGATTCGTTTATC+TGG | + | chr7_2:84325876-84325895 | None:intergenic | 35.0% | |
| CACTTGAAAATGAAGTGACA+TGG | - | chr7_2:84325893-84325912 | Msa1084060:intron | 35.0% | |
| AATATGTGGAACACCAAACA+TGG | - | chr7_2:84325966-84325985 | Msa1084060:intron | 35.0% | |
| TATGGCAGAAGAATTTGTCA+TGG | - | chr7_2:84326056-84326075 | Msa1084060:intron | 35.0% | |
| ATGGCAGAAGAATTTGTCAT+GGG | - | chr7_2:84326057-84326076 | Msa1084060:intron | 35.0% | |
| TCCAACAGATCAAAGAGATT+TGG | + | chr7_2:84326105-84326124 | None:intergenic | 35.0% | |
| ACATCAGGTACATCATATTG+TGG | - | chr7_2:84326138-84326157 | Msa1084060:intron | 35.0% | |
| AAGATCACTCTAAGCTTGAA+AGG | - | chr7_2:84326163-84326182 | Msa1084060:intron | 35.0% | |
| !! | CTTTTTCACATCTCAACTCT+AGG | + | chr7_2:84326218-84326237 | None:intergenic | 35.0% |
| TTGTTGGAAGTTGCAAATCA+TGG | - | chr7_2:84326241-84326260 | Msa1084060:intron | 35.0% | |
| ! | TTTTGGCAGATGAGTTATAC+AGG | - | chr7_2:84326298-84326317 | Msa1084060:CDS | 35.0% |
| TTTGGCAGATGAGTTATACA+GGG | - | chr7_2:84326299-84326318 | Msa1084060:CDS | 35.0% | |
| AAACTTGGAAGATGTAATGG+TGG | - | chr7_2:84326338-84326357 | Msa1084060:CDS | 35.0% | |
| ! | TGACATTGAAGCATTTGAAG+AGG | - | chr7_2:84326413-84326432 | Msa1084060:intron | 35.0% |
| ! | GACATTGAAGCATTTGAAGA+GGG | - | chr7_2:84326414-84326433 | Msa1084060:intron | 35.0% |
| ! | ACATTGAAGCATTTGAAGAG+GGG | - | chr7_2:84326415-84326434 | Msa1084060:intron | 35.0% |
| AGACTGTTTGATTGATGAGA+TGG | - | chr7_2:84326461-84326480 | Msa1084060:intron | 35.0% | |
| AATATTGTAGTACTGCCCAA+TGG | + | chr7_2:84326633-84326652 | None:intergenic | 35.0% | |
| GAGCTTAGTTATATGGTAAC+CGG | - | chr7_2:84326686-84326705 | Msa1084060:five_prime_UTR | 35.0% | |
| GAAACAGTACAATTGTACAG+GGG | + | chr7_2:84326759-84326778 | None:intergenic | 35.0% | |
| GGAAACAGTACAATTGTACA+GGG | + | chr7_2:84326760-84326779 | None:intergenic | 35.0% | |
| AGGAAACAGTACAATTGTAC+AGG | + | chr7_2:84326761-84326780 | None:intergenic | 35.0% | |
| !! | AGGTGTTGTTGTTGTCACTT+GGG | + | chr7_2:84321959-84321978 | None:intergenic | 40.0% |
| !! | AAGGTGTTGTTGTTGTCACT+TGG | + | chr7_2:84321960-84321979 | None:intergenic | 40.0% |
| TTCAGAGCAAAGAGATCTGT+GGG | + | chr7_2:84322040-84322059 | None:intergenic | 40.0% | |
| ATTCAGAGCAAAGAGATCTG+TGG | + | chr7_2:84322041-84322060 | None:intergenic | 40.0% | |
| CTGAATGTGAGCACAAAAGA+AGG | - | chr7_2:84322055-84322074 | Msa1084060:three_prime_UTR | 40.0% | |
| !! | CAATTCTGTTTCTGACTGAG+TGG | - | chr7_2:84322238-84322257 | Msa1084060:three_prime_UTR | 40.0% |
| AATCTCGTAAGAAGCTCGTT+TGG | - | chr7_2:84322514-84322533 | Msa1084060:CDS | 40.0% | |
| TGGAACAATCAAACCTTACC+TGG | - | chr7_2:84322534-84322553 | Msa1084060:CDS | 40.0% | |
| !! | GGTTCTAAATAGGTGGACAA+AGG | + | chr7_2:84322644-84322663 | None:intergenic | 40.0% |
| !! | CCAAACAGGTTCTAAATAGG+TGG | + | chr7_2:84322651-84322670 | None:intergenic | 40.0% |
| ! | CCACCTATTTAGAACCTGTT+TGG | - | chr7_2:84322648-84322667 | Msa1084060:CDS | 40.0% |
| CATCAACTGCAGAAGTTTCA+AGG | - | chr7_2:84322977-84322996 | Msa1084060:CDS | 40.0% | |
| GGAAAATCTAGAGACCTTAC+CGG | - | chr7_2:84323008-84323027 | Msa1084060:intron | 40.0% | |
| AAAGCAGACAGCAAAAAGTG+GGG | + | chr7_2:84323064-84323083 | None:intergenic | 40.0% | |
| CATCAGTTTGTAGTGATGAG+GGG | - | chr7_2:84323213-84323232 | Msa1084060:intron | 40.0% | |
| ! | ATTAGTCTAGCTACTAACCC+GGG | + | chr7_2:84323254-84323273 | None:intergenic | 40.0% |
| ! | CATTAGTCTAGCTACTAACC+CGG | + | chr7_2:84323255-84323274 | None:intergenic | 40.0% |
| ! | GGGTTAGTAGCTAGACTAAT+GGG | - | chr7_2:84323254-84323273 | Msa1084060:intron | 40.0% |
| !! | AGTAGCTAGACTAATGGGTT+TGG | - | chr7_2:84323259-84323278 | Msa1084060:intron | 40.0% |
| TTAAGTCGGAGAAGTCTTCT+TGG | - | chr7_2:84323420-84323439 | Msa1084060:intron | 40.0% | |
| TAAGTCGGAGAAGTCTTCTT+GGG | - | chr7_2:84323421-84323440 | Msa1084060:intron | 40.0% | |
| TTTATGTGCCCTTGATTCCA+TGG | + | chr7_2:84323450-84323469 | None:intergenic | 40.0% | |
| ! | GGAATCAAGGGCACATAAAA+TGG | - | chr7_2:84323451-84323470 | Msa1084060:intron | 40.0% |
| TGAAATGTTGCCTCCAAAGT+CGG | - | chr7_2:84323502-84323521 | Msa1084060:CDS | 40.0% | |
| CCTATTGTGAGTAACTGGAA+TGG | + | chr7_2:84323534-84323553 | None:intergenic | 40.0% | |
| CCATTCCAGTTACTCACAAT+AGG | - | chr7_2:84323531-84323550 | Msa1084060:CDS | 40.0% | |
| GAAGAATGCAGCTCATGTAA+TGG | - | chr7_2:84323592-84323611 | Msa1084060:CDS | 40.0% | |
| !! | GGAATAGAGTTTTATCAGGC+GGG | - | chr7_2:84323660-84323679 | Msa1084060:intron | 40.0% |
| !! | TCGACTAGCTTTCTAGACAT+GGG | + | chr7_2:84323749-84323768 | None:intergenic | 40.0% |
| AAATTAGAACTCCTCTCACC+AGG | + | chr7_2:84323803-84323822 | None:intergenic | 40.0% | |
| CGTTCAAAGCAGAGATACAA+TGG | - | chr7_2:84323946-84323965 | Msa1084060:CDS | 40.0% | |
| TTAAGTCAAACCAGCTCACA+AGG | - | chr7_2:84324017-84324036 | Msa1084060:CDS | 40.0% | |
| ! | CTCGGTTTGTATTTGGTTTC+TGG | + | chr7_2:84324045-84324064 | None:intergenic | 40.0% |
| AAAACGTGTGCAAACCGTAA+TGG | - | chr7_2:84324076-84324095 | Msa1084060:CDS | 40.0% | |
| GAAGATGAAACTCGTGTTGT+CGG | + | chr7_2:84324184-84324203 | None:intergenic | 40.0% | |
| AAGTTCTACTGGAGTCAGAA+AGG | - | chr7_2:84324207-84324226 | Msa1084060:CDS | 40.0% | |
| AGTCAGAAAGGCAACAAACA+AGG | - | chr7_2:84324219-84324238 | Msa1084060:CDS | 40.0% | |
| GTCAGAAAGGCAACAAACAA+GGG | - | chr7_2:84324220-84324239 | Msa1084060:CDS | 40.0% | |
| TAGGGCAATCAATAACCGAA+AGG | - | chr7_2:84324282-84324301 | Msa1084060:CDS | 40.0% | |
| ! | GTCAACACCAAATCTAGTTC+TGG | + | chr7_2:84324569-84324588 | None:intergenic | 40.0% |
| !! | AGATTTGGTGTTGACTCTCT+TGG | - | chr7_2:84324574-84324593 | Msa1084060:CDS | 40.0% |
| !! | GATTTGGTGTTGACTCTCTT+GGG | - | chr7_2:84324575-84324594 | Msa1084060:CDS | 40.0% |
| TGATGCATTGAGTGTCTTGT+TGG | - | chr7_2:84324657-84324676 | Msa1084060:CDS | 40.0% | |
| CTAGATCTCAAACCAGTAGA+AGG | + | chr7_2:84324748-84324767 | None:intergenic | 40.0% | |
| !! | GGTATTGGTGTTAACCATAC+TGG | + | chr7_2:84324788-84324807 | None:intergenic | 40.0% |
| !! | TGCTGATTCATGTTAAGCAC+TGG | + | chr7_2:84324883-84324902 | None:intergenic | 40.0% |
| TAACATGAATCAGCAACTGC+AGG | - | chr7_2:84324888-84324907 | Msa1084060:CDS | 40.0% | |
| TGTAGCAGCAACAATGAAAG+TGG | - | chr7_2:84325214-84325233 | Msa1084060:CDS | 40.0% | |
| AACACACAGGTGCAACATAA+AGG | + | chr7_2:84325494-84325513 | None:intergenic | 40.0% | |
| TCAAAGCTCTTCCATGTCTA+TGG | - | chr7_2:84325921-84325940 | Msa1084060:intron | 40.0% | |
| CAAAGCTCTTCCATGTCTAT+GGG | - | chr7_2:84325922-84325941 | Msa1084060:intron | 40.0% | |
| AAAGCTCTTCCATGTCTATG+GGG | - | chr7_2:84325923-84325942 | Msa1084060:intron | 40.0% | |
| ACTTGGCAACACAGAGTTTA+TGG | - | chr7_2:84326038-84326057 | Msa1084060:intron | 40.0% | |
| GCCAAATCTCTTTGATCTGT+TGG | - | chr7_2:84326101-84326120 | Msa1084060:intron | 40.0% | |
| ATGTACCTGATGTACTCTGA+TGG | + | chr7_2:84326131-84326150 | None:intergenic | 40.0% | |
| TCACTCTAAGCTTGAAAGGA+AGG | - | chr7_2:84326167-84326186 | Msa1084060:intron | 40.0% | |
| TTGCAAATCATGGCCTAGAT+GGG | - | chr7_2:84326251-84326270 | Msa1084060:intron | 40.0% | |
| TGAATTGATGTCACCCATCT+AGG | + | chr7_2:84326267-84326286 | None:intergenic | 40.0% | |
| GATGGGTGACATCAATTCAA+AGG | - | chr7_2:84326268-84326287 | Msa1084060:CDS | 40.0% | |
| GGTGACATCAATTCAAAGGA+AGG | - | chr7_2:84326272-84326291 | Msa1084060:CDS | 40.0% | |
| !! | AATGACATGAGCACTGGATA+TGG | - | chr7_2:84326375-84326394 | Msa1084060:intron | 40.0% |
| !! | ATGACATGAGCACTGGATAT+GGG | - | chr7_2:84326376-84326395 | Msa1084060:intron | 40.0% |
| ! | TACATAATGGAAGCTACCAG+GGG | + | chr7_2:84326515-84326534 | None:intergenic | 40.0% |
| ! | CTACATAATGGAAGCTACCA+GGG | + | chr7_2:84326516-84326535 | None:intergenic | 40.0% |
| ! | ACTACATAATGGAAGCTACC+AGG | + | chr7_2:84326517-84326536 | None:intergenic | 40.0% |
| CTGACAAAGAAACACTGAAG+TGG | - | chr7_2:84326576-84326595 | Msa1084060:five_prime_UTR | 40.0% | |
| ! | AGTCCCTCATGTTTTTCCAT+TGG | - | chr7_2:84326614-84326633 | Msa1084060:five_prime_UTR | 40.0% |
| ! | GTCCCTCATGTTTTTCCATT+GGG | - | chr7_2:84326615-84326634 | Msa1084060:five_prime_UTR | 40.0% |
| TGCCCAATGGAAAAACATGA+GGG | + | chr7_2:84326620-84326639 | None:intergenic | 40.0% | |
| ATATGGTAACCGGTAACCAT+TGG | - | chr7_2:84326696-84326715 | Msa1084060:five_prime_UTR | 40.0% | |
| TCAGAGCAAAGAGATCTGTG+GGG | + | chr7_2:84322039-84322058 | None:intergenic | 45.0% | |
| !! | TCTGTTTCTGACTGAGTGGA+AGG | - | chr7_2:84322242-84322261 | Msa1084060:three_prime_UTR | 45.0% |
| !! | CTGTTTCTGACTGAGTGGAA+GGG | - | chr7_2:84322243-84322262 | Msa1084060:three_prime_UTR | 45.0% |
| GTGGAAGGGTTTCTCGTATA+AGG | - | chr7_2:84322257-84322276 | Msa1084060:three_prime_UTR | 45.0% | |
| AACTGCAGAAGTTTCAAGGC+AGG | - | chr7_2:84322981-84323000 | Msa1084060:intron | 45.0% | |
| ACTGCAGAAGTTTCAAGGCA+GGG | - | chr7_2:84322982-84323001 | Msa1084060:intron | 45.0% | |
| AGAAGTTTCAAGGCAGGGAA+AGG | - | chr7_2:84322987-84323006 | Msa1084060:intron | 45.0% | |
| AAGCAGACAGCAAAAAGTGG+GGG | + | chr7_2:84323063-84323082 | None:intergenic | 45.0% | |
| ! | TTTGTAGTGATGAGGGGTGT+GGG | - | chr7_2:84323219-84323238 | Msa1084060:intron | 45.0% |
| !! | CGGGTTAGTAGCTAGACTAA+TGG | - | chr7_2:84323253-84323272 | Msa1084060:intron | 45.0% |
| GAAGACTTCTCCGACTTAAG+TGG | + | chr7_2:84323419-84323438 | None:intergenic | 45.0% | |
| TTGGGATGCCATGGAATCAA+GGG | - | chr7_2:84323439-84323458 | Msa1084060:intron | 45.0% | |
| GAATGCAGCTCATGTAATGG+AGG | - | chr7_2:84323595-84323614 | Msa1084060:CDS | 45.0% | |
| GCGGCTGCTAAGATAATTGA+TGG | - | chr7_2:84323617-84323636 | Msa1084060:intron | 45.0% | |
| TATTCCTCGTATAGGGCTGA+GGG | + | chr7_2:84323646-84323665 | None:intergenic | 45.0% | |
| !! | GTCGACTAGCTTTCTAGACA+TGG | + | chr7_2:84323750-84323769 | None:intergenic | 45.0% |
| AAGCTAGTCGACCCAAACAA+TGG | - | chr7_2:84323758-84323777 | Msa1084060:intron | 45.0% | |
| CAAATTGTAAGCCTGGTGAG+AGG | - | chr7_2:84323789-84323808 | Msa1084060:intron | 45.0% | |
| ! | GGCAATGCTCGGTTTGTATT+TGG | + | chr7_2:84324052-84324071 | None:intergenic | 45.0% |
| AAACCGTAATGGCAATGTGC+TGG | - | chr7_2:84324087-84324106 | Msa1084060:CDS | 45.0% | |
| GTACCAGCACATTGCCATTA+CGG | + | chr7_2:84324093-84324112 | None:intergenic | 45.0% | |
| !! | AACTCGTGTTGTCGGCTTAT+TGG | + | chr7_2:84324176-84324195 | None:intergenic | 45.0% |
| AGCCTAAAAGGTCAAGCTCT+AGG | - | chr7_2:84324263-84324282 | Msa1084060:CDS | 45.0% | |
| GCCTAAAAGGTCAAGCTCTA+GGG | - | chr7_2:84324264-84324283 | Msa1084060:CDS | 45.0% | |
| ! | TCTGGTTTCCATCACTTGCT+CGG | + | chr7_2:84324551-84324570 | None:intergenic | 45.0% |
| ! | TCTGAGATTACGGTACACTG+AGG | + | chr7_2:84324721-84324740 | None:intergenic | 45.0% |
| TCAGTGTACCGTAATCTCAG+AGG | - | chr7_2:84324720-84324739 | Msa1084060:CDS | 45.0% | |
| !! | AGAAGGCTCCTCTGAGATTA+CGG | + | chr7_2:84324731-84324750 | None:intergenic | 45.0% |
| ! | GCAAGACAAAGCATCCAGTA+TGG | - | chr7_2:84324771-84324790 | Msa1084060:CDS | 45.0% |
| CTATCGCTGTTGTTCAAGTG+AGG | - | chr7_2:84324855-84324874 | Msa1084060:CDS | 45.0% | |
| TAGACTCAGTAAATGGCGTG+TGG | + | chr7_2:84325081-84325100 | None:intergenic | 45.0% | |
| GACAGTGAAGACAGTGCATA+TGG | - | chr7_2:84325307-84325326 | Msa1084060:CDS | 45.0% | |
| CACATATTGCCCCATAGACA+TGG | + | chr7_2:84325935-84325954 | None:intergenic | 45.0% | |
| CATGTCTATGGGGCAATATG+TGG | - | chr7_2:84325933-84325952 | Msa1084060:intron | 45.0% | |
| GTGGCTGTCACACAAATATG+TGG | - | chr7_2:84325952-84325971 | Msa1084060:intron | 45.0% | |
| GAGAACCATCAGAGTACATC+AGG | - | chr7_2:84326123-84326142 | Msa1084060:intron | 45.0% | |
| GTTGCAAATCATGGCCTAGA+TGG | - | chr7_2:84326250-84326269 | Msa1084060:intron | 45.0% | |
| !! | TGAGCACTGGATATGGGAAA+TGG | - | chr7_2:84326382-84326401 | Msa1084060:intron | 45.0% |
| TGCTTGTTTAACTAACCCCC+TGG | - | chr7_2:84326496-84326515 | Msa1084060:intron | 45.0% | |
| ! | ACATAATGGAAGCTACCAGG+GGG | + | chr7_2:84326514-84326533 | None:intergenic | 45.0% |
| CTGCCCAATGGAAAAACATG+AGG | + | chr7_2:84326621-84326640 | None:intergenic | 45.0% | |
| CAGTACAATTGTACAGGGGA+GGG | + | chr7_2:84326755-84326774 | None:intergenic | 45.0% | |
| ACAGTACAATTGTACAGGGG+AGG | + | chr7_2:84326756-84326775 | None:intergenic | 45.0% | |
| !!! | TTTTATTTGATTTATTTTTT+TGG | - | chr7_2:84323112-84323131 | Msa1084060:intron | 5.0% |
| ! | AGAGAGAGAGAGAGGTGTGA+AGG | + | chr7_2:84321979-84321998 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr7_2:84321985-84322004 | None:intergenic | 50.0% | |
| CAGAGCAAAGAGATCTGTGG+GGG | + | chr7_2:84322038-84322057 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGACA+TGG | + | chr7_2:84322574-84322593 | None:intergenic | 50.0% | |
| AGCAGACAGCAAAAAGTGGG+GGG | + | chr7_2:84323062-84323081 | None:intergenic | 50.0% | |
| GTTTGTAGTGATGAGGGGTG+TGG | - | chr7_2:84323218-84323237 | Msa1084060:intron | 50.0% | |
| TCTTTGCCAACTTCGGACGT+CGG | - | chr7_2:84323284-84323303 | Msa1084060:intron | 50.0% | |
| GGAGCTGAATAGTGAAGCAC+CGG | + | chr7_2:84323318-84323337 | None:intergenic | 50.0% | |
| CATGGATGACTATCGTCGTG+CGG | - | chr7_2:84323379-84323398 | Msa1084060:intron | 50.0% | |
| GAAGTCTTCTTGGGATGCCA+TGG | - | chr7_2:84323430-84323449 | Msa1084060:intron | 50.0% | |
| CTTGGGATGCCATGGAATCA+AGG | - | chr7_2:84323438-84323457 | Msa1084060:intron | 50.0% | |
| ! | ATGGGTTTAGCCGACTTTGG+AGG | + | chr7_2:84323515-84323534 | None:intergenic | 50.0% |
| ! | GGAATGGGTTTAGCCGACTT+TGG | + | chr7_2:84323518-84323537 | None:intergenic | 50.0% |
| ACATGAGCTGCATTCTTCGG+CGG | + | chr7_2:84323590-84323609 | None:intergenic | 50.0% | |
| ! | TGCAGCTCATGTAATGGAGG+CGG | - | chr7_2:84323598-84323617 | Msa1084060:CDS | 50.0% |
| CTATTCCTCGTATAGGGCTG+AGG | + | chr7_2:84323647-84323666 | None:intergenic | 50.0% | |
| ! | ACGTTTTCTGCGGCAATGCT+CGG | + | chr7_2:84324063-84324082 | None:intergenic | 50.0% |
| ! | CGGTTTGCACACGTTTTCTG+CGG | + | chr7_2:84324073-84324092 | None:intergenic | 50.0% |
| ! | GCCCTAGAGCTTGACCTTTT+AGG | + | chr7_2:84324268-84324287 | None:intergenic | 50.0% |
| TGGATGGGGGAAACTCCTTT+CGG | + | chr7_2:84324300-84324319 | None:intergenic | 50.0% | |
| TGATCAGGACTTCTTGCCTC+AGG | + | chr7_2:84324370-84324389 | None:intergenic | 50.0% | |
| TCGGGCACACTTCTCTTCAA+GGG | + | chr7_2:84324514-84324533 | None:intergenic | 50.0% | |
| ATCTCAGAGGAGCCTTCTAC+TGG | - | chr7_2:84324733-84324752 | Msa1084060:CDS | 50.0% | |
| CAGGAAGAAACTGATCGGCA+CGG | + | chr7_2:84325797-84325816 | None:intergenic | 50.0% | |
| !! | AAACGGTGCTGCCTGAAAAC+AGG | + | chr7_2:84325816-84325835 | None:intergenic | 50.0% |
| GTCTGCAATGACATGAGCAC+TGG | - | chr7_2:84326369-84326388 | Msa1084060:intron | 50.0% | |
| AGCATTTGAAGAGGGGTCAG+AGG | - | chr7_2:84326422-84326441 | Msa1084060:intron | 50.0% | |
| AAGAGGGGTCAGAGGTTGAA+GGG | - | chr7_2:84326430-84326449 | Msa1084060:intron | 50.0% | |
| !! | TGAGGGTGCTCTTCGTTCCA+TGG | - | chr7_2:84323361-84323380 | Msa1084060:intron | 55.0% |
| CGCACGACGATAGTCATCCA+TGG | + | chr7_2:84323381-84323400 | None:intergenic | 55.0% | |
| !! | GTTTCTGGCTCCTTGTGAGC+TGG | + | chr7_2:84324030-84324049 | None:intergenic | 55.0% |
| !! | TGACAGCAGAGGTGTTCCTG+AGG | - | chr7_2:84324351-84324370 | Msa1084060:CDS | 55.0% |
| CTCGGGCACACTTCTCTTCA+AGG | + | chr7_2:84324515-84324534 | None:intergenic | 55.0% | |
| TCGGCAGAGGATAGTGACTC+GGG | + | chr7_2:84324532-84324551 | None:intergenic | 55.0% | |
| CTCGGCAGAGGATAGTGACT+CGG | + | chr7_2:84324533-84324552 | None:intergenic | 55.0% | |
| ATCCTCTGCCGAGCAAGTGA+TGG | - | chr7_2:84324540-84324559 | Msa1084060:CDS | 55.0% | |
| TTCCATCACTTGCTCGGCAG+AGG | + | chr7_2:84324545-84324564 | None:intergenic | 55.0% | |
| GAAGAGGGGTCAGAGGTTGA+AGG | - | chr7_2:84326429-84326448 | Msa1084060:intron | 55.0% | |
| AGAGGGGTCAGAGGTTGAAG+GGG | - | chr7_2:84326431-84326450 | Msa1084060:intron | 55.0% | |
| GGGTGTGGGAGTAAAGCTCC+CGG | - | chr7_2:84323233-84323252 | Msa1084060:intron | 60.0% | |
| GGTGTGGGAGTAAAGCTCCC+GGG | - | chr7_2:84323234-84323253 | Msa1084060:intron | 60.0% | |
| AGCTCACCGACGTCCGAAGT+TGG | + | chr7_2:84323293-84323312 | None:intergenic | 60.0% | |
| GAAGCCCTCAGCCCTATACG+AGG | - | chr7_2:84323639-84323658 | Msa1084060:intron | 60.0% | |
| TCGGACGTCGGTGAGCTCTC+CGG | - | chr7_2:84323296-84323315 | Msa1084060:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84321951 | 84326871 | 84321951 | ID=Msa1084060;Name=Msa1084060 |
| chr7_2 | mRNA | 84321951 | 84326871 | 84321951 | ID=Msa1084060-mRNA-1;Parent=Msa1084060;Name=Msa1084060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=312|1|1|1|0.66|0.71|7|365|910 |
| chr7_2 | exon | 84321951 | 84322998 | 84321951 | ID=Msa1084060-mRNA-1:exon:22500;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84323494 | 84323635 | 84323494 | ID=Msa1084060-mRNA-1:exon:22499;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84323913 | 84325664 | 84323913 | ID=Msa1084060-mRNA-1:exon:22498;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84325775 | 84325833 | 84325775 | ID=Msa1084060-mRNA-1:exon:22497;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84326267 | 84326382 | 84326267 | ID=Msa1084060-mRNA-1:exon:22496;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84326544 | 84326786 | 84326544 | ID=Msa1084060-mRNA-1:exon:22495;Parent=Msa1084060-mRNA-1 |
| chr7_2 | exon | 84326822 | 84326871 | 84326822 | ID=Msa1084060-mRNA-1:exon:22494;Parent=Msa1084060-mRNA-1 |
| chr7_2 | five_prime_UTR | 84326822 | 84326871 | 84326822 | ID=Msa1084060-mRNA-1:five_prime_utr;Parent=Msa1084060-mRNA-1 |
| chr7_2 | five_prime_UTR | 84326544 | 84326786 | 84326544 | ID=Msa1084060-mRNA-1:five_prime_utr;Parent=Msa1084060-mRNA-1 |
| chr7_2 | five_prime_UTR | 84326364 | 84326382 | 84326364 | ID=Msa1084060-mRNA-1:five_prime_utr;Parent=Msa1084060-mRNA-1 |
| chr7_2 | CDS | 84326267 | 84326363 | 84326267 | ID=Msa1084060-mRNA-1:cds;Parent=Msa1084060-mRNA-1 |
| chr7_2 | CDS | 84325775 | 84325833 | 84325775 | ID=Msa1084060-mRNA-1:cds;Parent=Msa1084060-mRNA-1 |
| chr7_2 | CDS | 84323913 | 84325664 | 84323913 | ID=Msa1084060-mRNA-1:cds;Parent=Msa1084060-mRNA-1 |
| chr7_2 | CDS | 84323494 | 84323635 | 84323494 | ID=Msa1084060-mRNA-1:cds;Parent=Msa1084060-mRNA-1 |
| chr7_2 | CDS | 84322316 | 84322998 | 84322316 | ID=Msa1084060-mRNA-1:cds;Parent=Msa1084060-mRNA-1 |
| chr7_2 | three_prime_UTR | 84321951 | 84322315 | 84321951 | ID=Msa1084060-mRNA-1:three_prime_utr;Parent=Msa1084060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
