AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0662600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662600 MtrunA17_Chr7g0271711 93.969 912 52 2 1 911 1 910 0.0 1754
Msa0662600 MtrunA17_Chr1g0192581 46.224 874 335 26 52 911 5 757 0.0 590
Msa0662600 MtrunA17_Chr2g0294831 32.710 963 546 28 2 909 6 921 7.36e-114 370
Msa0662600 MtrunA17_Chr7g0250831 25.408 429 262 14 491 909 555 935 8.67e-20 95.1
Msa0662600 MtrunA17_Chr6g0457761 25.051 491 265 19 449 909 461 878 1.06e-17 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662600 AT5G26910.4 31.155 918 528 21 1 909 4 826 1.21e-106 350
Msa0662600 AT5G26910.1 31.155 918 528 21 1 909 4 826 1.21e-106 350
Msa0662600 AT5G26910.3 31.155 918 527 21 1 909 4 825 2.67e-105 346
Msa0662600 AT3G58650.1 32.051 936 480 39 1 909 4 810 2.12e-92 311
Msa0662600 AT5G26910.2 32.997 594 336 12 1 586 4 543 1.92e-63 226
Msa0662600 AT3G05750.1 33.665 603 321 19 1 585 7 548 2.22e-52 197
Msa0662600 AT3G05750.1 36.970 165 94 2 747 910 644 799 2.58e-24 110
Msa0662600 AT3G05750.4 34.336 565 301 20 33 585 34 540 2.92e-49 188
Msa0662600 AT3G05750.4 36.970 165 94 2 747 910 636 791 3.65e-24 109
Msa0662600 AT3G05750.3 33.598 503 268 19 91 585 1 445 6.95e-43 167
Msa0662600 AT3G05750.3 36.970 165 94 2 747 910 541 696 2.83e-24 109
Msa0662600 AT3G05750.2 33.598 503 268 19 91 585 1 445 6.95e-43 167
Msa0662600 AT3G05750.2 36.970 165 94 2 747 910 541 696 2.83e-24 109

Find 236 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGGTTTGTATTTGGTTTC+TGG 0.052036 4_4:-353756 None:intergenic
AATAATAATTTATCGAAATT+TGG 0.105688 4_4:-351838 None:intergenic
ACTTGGCAACACAGAGTTTA+TGG 0.185619 4_4:+355747 Msa0662600:CDS
ACAATATTATGACCACTTAT+TGG 0.198103 4_4:+356354 Msa0662600:three_prime_UTR
GTGAATCAGATTCGTTTATC+TGG 0.198909 4_4:-355582 None:intergenic
AACTCGTGTTGTCGGCTTAT+TGG 0.224076 4_4:-353887 None:intergenic
GGCAATGCTCGGTTTGTATT+TGG 0.230061 4_4:-353763 None:intergenic
TCAAAGCTCTTCCATGTCTA+TGG 0.251505 4_4:+355630 Msa0662600:CDS
CAATGGTTTCAAATGGAAAT+AGG 0.279755 4_4:+353677 Msa0662600:CDS
GGAATCAAGGGCACATAAAA+TGG 0.292716 4_4:+353165 Msa0662600:CDS
TTGAGAAATATTATGTGTTT+TGG 0.295276 4_4:-354031 None:intergenic
AAATTGCATACATTGGATAA+TGG 0.303822 4_4:+351891 Msa0662600:five_prime_UTR
TTTGAAGAGTTGCCATTGTT+TGG 0.325053 4_4:-353484 None:intergenic
CAATATTATGACCACTTATT+GGG 0.325488 4_4:+356355 Msa0662600:three_prime_UTR
AAAACTCTATTCCTCGTATA+TGG 0.327299 4_4:-353364 None:intergenic
ATGTCAATGTTCAGCCTAAA+AGG 0.330024 4_4:+353965 Msa0662600:CDS
TGTCATGAGAATAAACTTCT+AGG 0.330795 4_4:-356555 None:intergenic
AATAACCTATTGTGAGTAAC+TGG 0.338823 4_4:-353250 None:intergenic
ATTTATCGAAATTTGGAAAA+GGG 0.347167 4_4:-351831 None:intergenic
TTCATCTTGTTCCATGGTAT+TGG 0.348152 4_4:-354514 None:intergenic
ATTTCTTTAGCCTGTTTGAT+TGG 0.349914 4_4:+352214 Msa0662600:CDS
TTATTATTTGTTTCGATTTG+CGG 0.349974 4_4:+351856 Msa0662600:five_prime_UTR
ATTAATTTGCCAATGGTTAC+CGG 0.354089 4_4:-356414 None:intergenic
TCCAACAGATCAAAGAGATT+TGG 0.354587 4_4:-355811 None:intergenic
TGATAAAGAGCTTAGTTATA+TGG 0.359210 4_4:+356388 Msa0662600:three_prime_UTR
TTAACAAGTAAAGGAAAATC+AGG 0.359427 4_4:+353610 Msa0662600:CDS
AAATCATTTCTTTCATGATC+AGG 0.359480 4_4:-354096 None:intergenic
AATTGCATACATTGGATAAT+GGG 0.359846 4_4:+351892 Msa0662600:five_prime_UTR
TACCGGAATCAAAGTTCTAT+AGG 0.363901 4_4:+352739 Msa0662600:CDS
TCTTGATTTGAAAGAGAGAT+TGG 0.364775 4_4:+353420 Msa0662600:CDS
GTGGAAGGGTTTCTCGTATA+AGG 0.366604 4_4:+351987 Msa0662600:five_prime_UTR
TGAATTGATGTCACCCATCT+AGG 0.368625 4_4:-355973 None:intergenic
TTGAAGAGTTGCCATTGTTT+GGG 0.374946 4_4:-353483 None:intergenic
AATGACATGAGCACTGGATA+TGG 0.378953 4_4:+356084 Msa0662600:CDS
GATTTGGTGTTGACTCTCTT+GGG 0.382883 4_4:+354289 Msa0662600:CDS
GCCAAATCTCTTTGATCTGT+TGG 0.383800 4_4:+355810 Msa0662600:CDS
ACTTCATAAACACTACATAA+TGG 0.384326 4_4:-356234 None:intergenic
GTCAACACCAAATCTAGTTC+TGG 0.386085 4_4:-354280 None:intergenic
GTTGCAAATCATGGCCTAGA+TGG 0.388615 4_4:+355959 Msa0662600:CDS
TTAAGTCGGAGAAGTCTTCT+TGG 0.388727 4_4:+353134 Msa0662600:CDS
TGGTTTGACTTAATCTCATT+CGG 0.390079 4_4:-353721 None:intergenic
CATCAACTGCAGAAGTTTCA+AGG 0.394024 4_4:+352691 Msa0662600:intron
AGATTTGGTGTTGACTCTCT+TGG 0.399113 4_4:+354288 Msa0662600:CDS
TACATTGGATAATGGGTGTT+TGG 0.400505 4_4:+351899 Msa0662600:five_prime_UTR
ATTACATGAGCTGCATTCTT+CGG 0.400753 4_4:-353304 None:intergenic
TAGAAACTTGGAAGATGTAA+TGG 0.401841 4_4:+356044 Msa0662600:CDS
AGAAAACCATTACTCTTGAT+TGG 0.403562 4_4:-353277 None:intergenic
GTACCAGCACATTGCCATTA+CGG 0.403636 4_4:-353804 None:intergenic
CTAGATCTCAAACCAGTAGA+AGG 0.406206 4_4:-354459 None:intergenic
GAAGATGAAACTCGTGTTGT+CGG 0.408487 4_4:-353895 None:intergenic
AATCTCGTAAGAAGCTCGTT+TGG 0.415531 4_4:+352244 Msa0662600:CDS
AGTAGCTAGACTAATGGGTT+TGG 0.415757 4_4:+352973 Msa0662600:CDS
TTCTGTCAGTGAAAGTTACT+TGG 0.418753 4_4:+355002 Msa0662600:CDS
GTTTCTGGCTCCTTGTGAGC+TGG 0.419501 4_4:-353741 None:intergenic
CCATTCCAGTTACTCACAAT+AGG 0.420132 4_4:+353245 Msa0662600:CDS
ATCTAGCATGGAAGAATAAA+CGG 0.422941 4_4:-355539 None:intergenic
TTTATGTGCCCTTGATTCCA+TGG 0.428294 4_4:-353161 None:intergenic
TGATGCATTGAGTGTCTTGT+TGG 0.428531 4_4:+354371 Msa0662600:CDS
CTCGGGCACACTTCTCTTCA+AGG 0.429593 4_4:-354226 None:intergenic
TCATCTTCAGAAAGTTCTAC+TGG 0.430240 4_4:+353910 Msa0662600:CDS
AAGGTGTTGTTGTTGTCACT+TGG 0.430294 4_4:-351700 None:intergenic
TAGATAAAGGTGGATGAGAA+TGG 0.432322 4_4:+352869 Msa0662600:intron
ATGGAAACCAGAACTAGATT+TGG 0.433236 4_4:+354273 Msa0662600:CDS
GGAATGGGTTTAGCCGACTT+TGG 0.433498 4_4:-353229 None:intergenic
TATTCTCATTTAACAAGTAA+AGG 0.433553 4_4:+353601 Msa0662600:CDS
ACCGGAATCAAAGTTCTATA+GGG 0.434864 4_4:+352740 Msa0662600:CDS
GGGTTAGTAGCTAGACTAAT+GGG 0.436466 4_4:+352968 Msa0662600:CDS
GAAGAGGGGTCAGAGGTTGA+AGG 0.439614 4_4:+356138 Msa0662600:CDS
ATGATTAACATTACCAGGTA+AGG 0.444021 4_4:-352277 None:intergenic
GCAAGACAAAGCATCCAGTA+TGG 0.444703 4_4:+354485 Msa0662600:CDS
AATTTATCGAAATTTGGAAA+AGG 0.444907 4_4:-351832 None:intergenic
AGAAGGCTCCTCTGAGATTA+CGG 0.445668 4_4:-354442 None:intergenic
GAGCTTAGTTATATGGTAAC+CGG 0.445862 4_4:+356395 Msa0662600:three_prime_UTR
AATGAAAGTGGAAATGATCT+AGG 0.445864 4_4:+354940 Msa0662600:CDS
TCATGCTTCTCATTATAATG+AGG 0.446452 4_4:+353057 Msa0662600:CDS
ATTTAGAATTCCAATCAAAC+AGG 0.448534 4_4:-352224 None:intergenic
TTTGAAATCTCTTGAGTGAC+TGG 0.449586 4_4:-353192 None:intergenic
CAAAGGTACATCATCATTCA+AGG 0.450037 4_4:+353540 Msa0662600:CDS
TTGTTGGAAGTTGCAAATCA+TGG 0.451707 4_4:+355950 Msa0662600:CDS
ATCTCAGAGGAGCCTTCTAC+TGG 0.456510 4_4:+354447 Msa0662600:CDS
CTATTGTGAGTAACTGGAAT+GGG 0.457459 4_4:-353244 None:intergenic
AACTCTTCAAATTGTAAGCC+TGG 0.458250 4_4:+353496 Msa0662600:CDS
GGTATTGGTGTTAACCATAC+TGG 0.458605 4_4:-354499 None:intergenic
GGAAAATCTAGAGACCTTAC+CGG 0.458686 4_4:+352722 Msa0662600:CDS
GACAGTGAAGACAGTGCATA+TGG 0.458972 4_4:+355024 Msa0662600:CDS
TTGTACAGACATCAGAAGTA+AGG 0.461314 4_4:+354893 Msa0662600:intron
CTGAATGTGAGCACAAAAGA+AGG 0.467211 4_4:+351785 Msa0662600:five_prime_UTR
GCGGCTGCTAAGATAATTGA+TGG 0.467501 4_4:+353331 Msa0662600:CDS
TCATCAGTTTGTAGTGATGA+GGG 0.470024 4_4:+352926 Msa0662600:CDS
CGGGTTAGTAGCTAGACTAA+TGG 0.470161 4_4:+352967 Msa0662600:CDS
TTTATCGAAATTTGGAAAAG+GGG 0.473251 4_4:-351830 None:intergenic
TGCTGATTCATGTTAAGCAC+TGG 0.476068 4_4:-354594 None:intergenic
TAAGTCGGAGAAGTCTTCTT+GGG 0.478430 4_4:+353135 Msa0662600:CDS
TTCCATCACTTGCTCGGCAG+AGG 0.481154 4_4:-354256 None:intergenic
CAAAGCTCTTCCATGTCTAT+GGG 0.483022 4_4:+355631 Msa0662600:CDS
TTTGGATTCTTTGCCAACTT+CGG 0.483220 4_4:+352991 Msa0662600:CDS
TTTGTAGTGATGAGGGGTGT+GGG 0.483558 4_4:+352933 Msa0662600:CDS
TTATAATAAATTGCATACAT+TGG 0.486264 4_4:+351884 Msa0662600:five_prime_UTR
GGTTGTCAGCATTCTGATGC+TGG 0.486477 4_4:+354961 Msa0662600:CDS
AGAGATACAATGGTTTCAAA+TGG 0.487273 4_4:+353670 Msa0662600:CDS
CTCGGCAGAGGATAGTGACT+CGG 0.487665 4_4:-354244 None:intergenic
CATGCTTCTCATTATAATGA+GGG 0.487956 4_4:+353058 Msa0662600:CDS
TGATCAGGACTTCTTGCCTC+AGG 0.489473 4_4:-354081 None:intergenic
TTTCAAATCAAGAATTCTCA+AGG 0.489682 4_4:-353410 None:intergenic
TGAATCAGATTCGTTTATCT+GGG 0.491141 4_4:-355581 None:intergenic
TGAGCACTGGATATGGGAAA+TGG 0.491726 4_4:+356091 Msa0662600:CDS
TGGAACAATCAAACCTTACC+TGG 0.493911 4_4:+352264 Msa0662600:CDS
GAGAACCATCAGAGTACATC+AGG 0.496191 4_4:+355832 Msa0662600:CDS
GAACATTTCATCTTGTTCCA+TGG 0.496613 4_4:-354520 None:intergenic
GTCGACTAGCTTTCTAGACA+TGG 0.496834 4_4:-353461 None:intergenic
ACCCTATAGAACTTTGATTC+CGG 0.497405 4_4:-352741 None:intergenic
CTTGGGATGCCATGGAATCA+AGG 0.497669 4_4:+353152 Msa0662600:CDS
CATGTCTATGGGGCAATATG+TGG 0.498871 4_4:+355642 Msa0662600:CDS
TCTGTTTCTGACTGAGTGGA+AGG 0.499092 4_4:+351972 Msa0662600:five_prime_UTR
TCACTCTAAGCTTGAAAGGA+AGG 0.500517 4_4:+355876 Msa0662600:CDS
TTGTCTCCAATCAAGAGTAA+TGG 0.505640 4_4:+353271 Msa0662600:CDS
AACTGCAGAAGTTTCAAGGC+AGG 0.506503 4_4:+352695 Msa0662600:intron
CTATTCCTCGTATATGGCTG+AGG 0.507488 4_4:-353358 None:intergenic
AGGAAACAGTACAATTGTAC+AGG 0.508439 4_4:-356467 None:intergenic
TGAGGGTGCTCTTCGTTCCA+TGG 0.510083 4_4:+353075 Msa0662600:CDS
ATAATGAGAAGCATGAAAGT+TGG 0.511372 4_4:-353050 None:intergenic
AGCTCACCGACGTCCGAAGT+TGG 0.511646 4_4:-353004 None:intergenic
TTCAGAGCAAAGAGATCTGT+GGG 0.512471 4_4:-351767 None:intergenic
GCCTAAAAGGTCAAGCTCTA+GGG 0.513483 4_4:+353978 Msa0662600:CDS
TCTGGTTTCCATCACTTGCT+CGG 0.514344 4_4:-354262 None:intergenic
AGCCTAAAAGGTCAAGCTCT+AGG 0.514877 4_4:+353977 Msa0662600:CDS
GAATATGTACAGAAAATACT+TGG 0.515552 4_4:+355730 Msa0662600:CDS
GAAGAATGCAGCTCATGTAA+TGG 0.515627 4_4:+353306 Msa0662600:CDS
TTCATCAGTTTGTAGTGATG+AGG 0.517539 4_4:+352925 Msa0662600:CDS
CCATCTTATTAATTTGCCAA+TGG 0.518662 4_4:-356421 None:intergenic
GACATTGAAGCATTTGAAGA+GGG 0.520513 4_4:+356123 Msa0662600:CDS
ATCCTCTGCCGAGCAAGTGA+TGG 0.524003 4_4:+354254 Msa0662600:CDS
AAGAGGGGTCAGAGGTTGAA+GGG 0.526933 4_4:+356139 Msa0662600:CDS
CCATTGGCAAATTAATAAGA+TGG 0.529264 4_4:+356421 Msa0662600:three_prime_UTR
CTGTTTCTGACTGAGTGGAA+GGG 0.530259 4_4:+351973 Msa0662600:five_prime_UTR
TCGGACGTCGGTGAGCTCTC+CGG 0.532203 4_4:+353010 Msa0662600:CDS
GAAGACTTCTCCGACTTAAG+TGG 0.533144 4_4:-353130 None:intergenic
ACTACATAATGGAAGCTACC+AGG 0.534911 4_4:-356223 None:intergenic
GGGTGTGGGAGTAAAGCTCC+CGG 0.536026 4_4:+352947 Msa0662600:CDS
ATGACATGAGCACTGGATAT+GGG 0.538932 4_4:+356085 Msa0662600:CDS
AGATACTTCTTCATCTAGCA+TGG 0.540273 4_4:-355551 None:intergenic
GTCTGCAATGACATGAGCAC+TGG 0.540768 4_4:+356078 Msa0662600:CDS
AGTATTATACTCCCAATAAG+TGG 0.544810 4_4:-356366 None:intergenic
ATAGAACTTTGATTCCGGTA+AGG 0.546952 4_4:-352736 None:intergenic
AGTCCGAGTAATATAGTAAG+TGG 0.550827 4_4:+352896 Msa0662600:CDS
GTTTGTAGTGATGAGGGGTG+TGG 0.551029 4_4:+352932 Msa0662600:CDS
AGGTGTTGTTGTTGTCACTT+GGG 0.551476 4_4:-351699 None:intergenic
ATGGGTTTAGCCGACTTTGG+AGG 0.553218 4_4:-353226 None:intergenic
GATGGGTGACATCAATTCAA+AGG 0.554306 4_4:+355977 Msa0662600:CDS
CATCAGTTTGTAGTGATGAG+GGG 0.554353 4_4:+352927 Msa0662600:CDS
AAAACGTGTGCAAACCGTAA+TGG 0.554411 4_4:+353790 Msa0662600:CDS
CATTAGTCTAGCTACTAACC+CGG 0.555448 4_4:-352966 None:intergenic
AAGTTCTACTGGAGTCAGAA+AGG 0.557721 4_4:+353921 Msa0662600:CDS
AGTCAGAAAGGCAACAAACA+AGG 0.557842 4_4:+353933 Msa0662600:CDS
CCTATTGTGAGTAACTGGAA+TGG 0.558950 4_4:-353245 None:intergenic
TTGCAAATCATGGCCTAGAT+GGG 0.560806 4_4:+355960 Msa0662600:CDS
AAGATCACTCTAAGCTTGAA+AGG 0.562316 4_4:+355872 Msa0662600:CDS
TCACTATCTATCATATGTGT+CGG 0.564183 4_4:-354351 None:intergenic
ATGGCAGAAGAATTTGTCAT+GGG 0.564588 4_4:+355766 Msa0662600:CDS
TGTAGCAGCAACAATGAAAG+TGG 0.564981 4_4:+354928 Msa0662600:CDS
AGACTGTTTGATTGATGAGA+TGG 0.565226 4_4:+356170 Msa0662600:CDS
GAAGTCTTCTTGGGATGCCA+TGG 0.565368 4_4:+353144 Msa0662600:CDS
CACATATTGCCCCATAGACA+TGG 0.565694 4_4:-355641 None:intergenic
CGTTCAAAGCAGAGATACAA+TGG 0.565930 4_4:+353660 Msa0662600:CDS
CTGACAAAGAAACACTGAAG+TGG 0.567776 4_4:+356285 Msa0662600:three_prime_UTR
TTGGGATGCCATGGAATCAA+GGG 0.569801 4_4:+353153 Msa0662600:CDS
CAATTCTGTTTCTGACTGAG+TGG 0.571548 4_4:+351968 Msa0662600:five_prime_UTR
TGAAATGTTGCCTCCAAAGT+CGG 0.572372 4_4:+353216 Msa0662600:CDS
ATATGGTAACCGGTAACCAT+TGG 0.573027 4_4:+356405 Msa0662600:three_prime_UTR
AGAAGTTTCAAGGCAGGGAA+AGG 0.573539 4_4:+352701 Msa0662600:intron
CAAAATAGTATGACTTCCAA+AGG 0.573557 4_4:+353841 Msa0662600:CDS
TGCAGCTCATGTAATGGAGG+CGG 0.575246 4_4:+353312 Msa0662600:CDS
TCGGGCACACTTCTCTTCAA+GGG 0.577563 4_4:-354225 None:intergenic
GGAGCTGAATAGTGAAGCAC+CGG 0.578587 4_4:-353029 None:intergenic
TGAAAACAATACTTCTTCAG+AGG 0.580060 4_4:-356487 None:intergenic
TATGGCAGAAGAATTTGTCA+TGG 0.581714 4_4:+355765 Msa0662600:CDS
TTCAAATCAAGAATTCTCAA+GGG 0.586162 4_4:-353409 None:intergenic
TGACATTGAAGCATTTGAAG+AGG 0.587741 4_4:+356122 Msa0662600:CDS
CTACATAATGGAAGCTACCA+GGG 0.593223 4_4:-356222 None:intergenic
TTAAGTCAAACCAGCTCACA+AGG 0.593311 4_4:+353731 Msa0662600:CDS
CTTAAACACACCACTTAAGT+CGG 0.594149 4_4:+353120 Msa0662600:CDS
CGCACGACGATAGTCATCCA+TGG 0.595188 4_4:-353092 None:intergenic
TCGCCACTTACTATATTACT+CGG 0.596350 4_4:-352899 None:intergenic
ACATTGAAGCATTTGAAGAG+GGG 0.596973 4_4:+356124 Msa0662600:CDS
AAATTAGAACTCCTCTCACC+AGG 0.597036 4_4:-353514 None:intergenic
CACTTGAAAATGAAGTGACA+TGG 0.597864 4_4:+355602 Msa0662600:CDS
GTGGCTGTCACACAAATATG+TGG 0.598071 4_4:+355661 Msa0662600:CDS
AATATGTGGAACACCAAACA+TGG 0.598654 4_4:+355675 Msa0662600:CDS
TAACATGAATCAGCAACTGC+AGG 0.601446 4_4:+354602 Msa0662600:CDS
TATTCCTCGTATATGGCTGA+GGG 0.603780 4_4:-353357 None:intergenic
TGTACAGACATCAGAAGTAA+GGG 0.605254 4_4:+354894 Msa0662600:intron
AGCATTTGAAGAGGGGTCAG+AGG 0.607202 4_4:+356131 Msa0662600:CDS
TCGGCAGAGGATAGTGACTC+GGG 0.608484 4_4:-354243 None:intergenic
CAGTACAATTGTACAGGGGA+GGG 0.610328 4_4:-356461 None:intergenic
GGTGACATCAATTCAAAGGA+AGG 0.612539 4_4:+355981 Msa0662600:CDS
TGCAAAACTTGTTCTTTACG+AGG 0.614521 4_4:-351947 None:intergenic
ACAGTACAATTGTACAGGGG+AGG 0.617088 4_4:-356462 None:intergenic
TCTTTGCCAACTTCGGACGT+CGG 0.617948 4_4:+352998 Msa0662600:CDS
ACTGCAGAAGTTTCAAGGCA+GGG 0.617971 4_4:+352696 Msa0662600:intron
ACATCAGGTACATCATATTG+TGG 0.620205 4_4:+355847 Msa0662600:CDS
ATTCAGAGCAAAGAGATCTG+TGG 0.625950 4_4:-351768 None:intergenic
AGAGGGGTCAGAGGTTGAAG+GGG 0.626738 4_4:+356140 Msa0662600:CDS
AATATTGTAGTACTGCCCAA+TGG 0.627557 4_4:-356339 None:intergenic
TGAATGTGAGCACAAAAGAA+GGG 0.627760 4_4:+351786 Msa0662600:five_prime_UTR
AAACCGTAATGGCAATGTGC+TGG 0.628053 4_4:+353801 Msa0662600:CDS
CTATCGCTGTTGTTCAAGTG+AGG 0.630068 4_4:+354569 Msa0662600:CDS
CAGAGCAAAGAGATCTGTGG+GGG 0.630488 4_4:-351765 None:intergenic
TCGACTAGCTTTCTAGACAT+GGG 0.631265 4_4:-353460 None:intergenic
AAACTTGGAAGATGTAATGG+TGG 0.636219 4_4:+356047 Msa0662600:CDS
AAAGGTACATCATCATTCAA+GGG 0.636259 4_4:+353541 Msa0662600:CDS
TTTGGCAGATGAGTTATACA+GGG 0.636557 4_4:+356008 Msa0662600:CDS
GGAAACAGTACAATTGTACA+GGG 0.636886 4_4:-356466 None:intergenic
ATGTACCTGATGTACTCTGA+TGG 0.636993 4_4:-355837 None:intergenic
ACATGAGCTGCATTCTTCGG+CGG 0.637093 4_4:-353301 None:intergenic
AAGCTAGTCGACCCAAACAA+TGG 0.638219 4_4:+353472 Msa0662600:CDS
AAGTAACTTTCACTGACAGA+AGG 0.642170 4_4:-355000 None:intergenic
GAATGCAGCTCATGTAATGG+AGG 0.646804 4_4:+353309 Msa0662600:CDS
GTCAGAAAGGCAACAAACAA+GGG 0.647142 4_4:+353934 Msa0662600:CDS
TAGGGCAATCAATAACCGAA+AGG 0.649794 4_4:+353996 Msa0662600:CDS
TTTCAAAATATCAAGCGACA+TGG 0.652102 4_4:+355702 Msa0662600:CDS
TATGGTTAACACCAATACCA+TGG 0.655461 4_4:+354503 Msa0662600:CDS
GGTGTGGGAGTAAAGCTCCC+GGG 0.662258 4_4:+352948 Msa0662600:CDS
AGAAGTTTATTCTCATGACA+CGG 0.665014 4_4:+356558 Msa0662600:three_prime_UTR
TGACAGCAGAGGTGTTCCTG+AGG 0.669852 4_4:+354065 Msa0662600:CDS
CAAATTGTAAGCCTGGTGAG+AGG 0.672573 4_4:+353503 Msa0662600:CDS
TACATAATGGAAGCTACCAG+GGG 0.677308 4_4:-356221 None:intergenic
ATTAGTCTAGCTACTAACCC+GGG 0.683901 4_4:-352965 None:intergenic
AAAGCTCTTCCATGTCTATG+GGG 0.687339 4_4:+355632 Msa0662600:CDS
CATGGATGACTATCGTCGTG+CGG 0.707839 4_4:+353093 Msa0662600:CDS
GAAGCCCTCAGCCATATACG+AGG 0.718262 4_4:+353353 Msa0662600:CDS
TCAGTGTACCGTAATCTCAG+AGG 0.719931 4_4:+354434 Msa0662600:CDS
AGAGCAAAGAGATCTGTGGG+GGG 0.745744 4_4:-351764 None:intergenic
TCAGAGCAAAGAGATCTGTG+GGG 0.751069 4_4:-351766 None:intergenic
GAAACAGTACAATTGTACAG+GGG 0.785668 4_4:-356465 None:intergenic
ACATAATGGAAGCTACCAGG+GGG 0.795203 4_4:-356220 None:intergenic
TCTGAGATTACGGTACACTG+AGG 0.805122 4_4:-354432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATTTATCGAAATT+TGG - chr4_4:351841-351860 None:intergenic 10.0%
!!! ATTTTTGAAAAATGTATAAA+AGG - chr4_4:355159-355178 None:intergenic 10.0%
!!! CAATTTTATATGTATTATAA+GGG - chr4_4:355483-355502 None:intergenic 10.0%
!! TTATAATAAATTGCATACAT+TGG + chr4_4:351884-351903 Msa0662600:five_prime_UTR 15.0%
!! ATAAGCTAAAAACATATTAT+GGG - chr4_4:352469-352488 None:intergenic 15.0%
!! AATAAGCTAAAAACATATTA+TGG - chr4_4:352470-352489 None:intergenic 15.0%
!!! TTTGATTTATTTTTTTGGTT+TGG + chr4_4:352831-352850 Msa0662600:intron 15.0%
!!! ATTGAAATTGTTTTAGATAA+AGG + chr4_4:352856-352875 Msa0662600:intron 15.0%
!!! GTAAAATAATTTTACACTAA+AGG - chr4_4:355256-355275 None:intergenic 15.0%
!!! GCAATTTTATATGTATTATA+AGG - chr4_4:355484-355503 None:intergenic 15.0%
!!! ATTGATATTAAATTGTTTTG+TGG - chr4_4:356523-356542 None:intergenic 15.0%
!! ATTTATCGAAATTTGGAAAA+GGG - chr4_4:351834-351853 None:intergenic 20.0%
!! AATTTATCGAAATTTGGAAA+AGG - chr4_4:351835-351854 None:intergenic 20.0%
!!! TTATTATTTGTTTCGATTTG+CGG + chr4_4:351856-351875 Msa0662600:five_prime_UTR 20.0%
!!! ATATAGGAAAAAAGAAGTAT+TGG + chr4_4:352164-352183 Msa0662600:intron 20.0%
!! TATTCTCATTTAACAAGTAA+AGG + chr4_4:353601-353620 Msa0662600:CDS 20.0%
!!! AAATATTATGTGTTTTGGAT+GGG - chr4_4:354029-354048 None:intergenic 20.0%
!!! TTGAGAAATATTATGTGTTT+TGG - chr4_4:354034-354053 None:intergenic 20.0%
!!! AGTTGTAAAATTGCATTTTA+TGG - chr4_4:354133-354152 None:intergenic 20.0%
!! AACAATTATTCTCAGTAAAT+TGG - chr4_4:354763-354782 None:intergenic 20.0%
!! AAAAATGTATAAAAGGCTAA+AGG - chr4_4:355152-355171 None:intergenic 20.0%
!! CATATTTGTTTATCAATGTT+TGG + chr4_4:355412-355431 Msa0662600:intron 20.0%
!!! TTTGTCAGAATTTTAATCAA+TGG - chr4_4:356273-356292 None:intergenic 20.0%
! TTTATCGAAATTTGGAAAAG+GGG - chr4_4:351833-351852 None:intergenic 25.0%
! AAATTGCATACATTGGATAA+TGG + chr4_4:351891-351910 Msa0662600:five_prime_UTR 25.0%
! AATTGCATACATTGGATAAT+GGG + chr4_4:351892-351911 Msa0662600:five_prime_UTR 25.0%
! AATTCGTTAGATTTCAGATT+TGG + chr4_4:352055-352074 Msa0662600:intron 25.0%
! ATTCGTTAGATTTCAGATTT+GGG + chr4_4:352056-352075 Msa0662600:intron 25.0%
! AACAGTATCAAAATAGTGAA+AGG - chr4_4:352120-352139 None:intergenic 25.0%
!!! TTCACTATTTTGATACTGTT+TGG + chr4_4:352120-352139 Msa0662600:intron 25.0%
!!! GAAAAAAGAAGTATTGGAAA+TGG + chr4_4:352170-352189 Msa0662600:exon 25.0%
!! ATTTAGAATTCCAATCAAAC+AGG - chr4_4:352227-352246 None:intergenic 25.0%
! ATAGCTTACACGAAAATATT+TGG + chr4_4:352527-352546 Msa0662600:intron 25.0%
! TATGTAAGTTTATCCAAACA+TGG + chr4_4:352610-352629 Msa0662600:intron 25.0%
! GAATAATATATGACCATGTT+TGG - chr4_4:352626-352645 None:intergenic 25.0%
!! GTAACAGAAACATTTAGAAT+AGG - chr4_4:352672-352691 None:intergenic 25.0%
!!! GAAATTGTTTTAGATAAAGG+TGG + chr4_4:352859-352878 Msa0662600:intron 25.0%
! TTCAAATCAAGAATTCTCAA+GGG - chr4_4:353412-353431 None:intergenic 25.0%
! TTTCAAATCAAGAATTCTCA+AGG - chr4_4:353413-353432 None:intergenic 25.0%
! TTAACAAGTAAAGGAAAATC+AGG + chr4_4:353610-353629 Msa0662600:CDS 25.0%
!!! TTTTGAAGTTGATTTACCTT+TGG - chr4_4:353860-353879 None:intergenic 25.0%
!!! AATATTATGTGTTTTGGATG+GGG - chr4_4:354028-354047 None:intergenic 25.0%
!!! GAAATATTATGTGTTTTGGA+TGG - chr4_4:354030-354049 None:intergenic 25.0%
! AAATCATTTCTTTCATGATC+AGG - chr4_4:354099-354118 None:intergenic 25.0%
!! AAATGCAATTTTACAACTGA+TGG + chr4_4:354135-354154 Msa0662600:CDS 25.0%
!!! ATAGCAATAATTTTTTGGGA+TGG - chr4_4:354329-354348 None:intergenic 25.0%
!!! GGAGATAGCAATAATTTTTT+GGG - chr4_4:354333-354352 None:intergenic 25.0%
! ATACTCAGTTTCATATGTAA+TGG + chr4_4:354650-354669 Msa0662600:intron 25.0%
!!! ATATTGTTTTGACTATGTGT+TGG - chr4_4:354733-354752 None:intergenic 25.0%
!! TGAGTCTAATTTTCCAAATT+AGG + chr4_4:354807-354826 Msa0662600:intron 25.0%
!!! CTTTGAGATCAAAACAAATA+AGG - chr4_4:355076-355095 None:intergenic 25.0%
! GTAAGAAGTAAAAAGTAAAC+AGG - chr4_4:355109-355128 None:intergenic 25.0%
! AATCACATCTCATATATGTT+AGG + chr4_4:355287-355306 Msa0662600:intron 25.0%
!!! ATTTTGAAATCTACCATGTT+TGG - chr4_4:355691-355710 None:intergenic 25.0%
! GAATATGTACAGAAAATACT+TGG + chr4_4:355730-355749 Msa0662600:CDS 25.0%
! ACTTCATAAACACTACATAA+TGG - chr4_4:356237-356256 None:intergenic 25.0%
! ACAATATTATGACCACTTAT+TGG + chr4_4:356354-356373 Msa0662600:three_prime_UTR 25.0%
! CAATATTATGACCACTTATT+GGG + chr4_4:356355-356374 Msa0662600:three_prime_UTR 25.0%
! TGATAAAGAGCTTAGTTATA+TGG + chr4_4:356388-356407 Msa0662600:three_prime_UTR 25.0%
!!! GATACTGTTTGGTAATGTTT+TGG + chr4_4:352131-352150 Msa0662600:intron 30.0%
!!! TTTTGGTTTGACTGTGATAT+AGG + chr4_4:352148-352167 Msa0662600:intron 30.0%
ATGGAGAAAAAACGTTCAAA+AGG + chr4_4:352189-352208 Msa0662600:CDS 30.0%
ATTTCTTTAGCCTGTTTGAT+TGG + chr4_4:352214-352233 Msa0662600:CDS 30.0%
ATGATTAACATTACCAGGTA+AGG - chr4_4:352280-352299 None:intergenic 30.0%
TCAAATAAGTCAAACCAAAC+AGG - chr4_4:352379-352398 None:intergenic 30.0%
!! TGTTTGGTTTGACTTATTTG+AGG + chr4_4:352378-352397 Msa0662600:intron 30.0%
! ATAATGAGAAGCATGAAAGT+TGG - chr4_4:353053-353072 None:intergenic 30.0%
TCATGCTTCTCATTATAATG+AGG + chr4_4:353057-353076 Msa0662600:CDS 30.0%
CATGCTTCTCATTATAATGA+GGG + chr4_4:353058-353077 Msa0662600:CDS 30.0%
AATAACCTATTGTGAGTAAC+TGG - chr4_4:353253-353272 None:intergenic 30.0%
AGAAAACCATTACTCTTGAT+TGG - chr4_4:353280-353299 None:intergenic 30.0%
AAAACTCTATTCCTCGTATA+TGG - chr4_4:353367-353386 None:intergenic 30.0%
! TCTTGATTTGAAAGAGAGAT+TGG + chr4_4:353420-353439 Msa0662600:CDS 30.0%
!! AGGAGTTCTAATTTTGACAA+AGG + chr4_4:353523-353542 Msa0662600:CDS 30.0%
! AAAGGTACATCATCATTCAA+GGG + chr4_4:353541-353560 Msa0662600:CDS 30.0%
AGAGATACAATGGTTTCAAA+TGG + chr4_4:353670-353689 Msa0662600:CDS 30.0%
CAATGGTTTCAAATGGAAAT+AGG + chr4_4:353677-353696 Msa0662600:CDS 30.0%
! TGGTTTGACTTAATCTCATT+CGG - chr4_4:353724-353743 None:intergenic 30.0%
CAAAATAGTATGACTTCCAA+AGG + chr4_4:353841-353860 Msa0662600:CDS 30.0%
!! ATATTATGTGTTTTGGATGG+GGG - chr4_4:354027-354046 None:intergenic 30.0%
!!! CGGAGATAGCAATAATTTTT+TGG - chr4_4:354334-354353 None:intergenic 30.0%
TCACTATCTATCATATGTGT+CGG - chr4_4:354354-354373 None:intergenic 30.0%
GGAAAATTAGACTCAGTAAA+TGG - chr4_4:354802-354821 None:intergenic 30.0%
AATGAAAGTGGAAATGATCT+AGG + chr4_4:354940-354959 Msa0662600:CDS 30.0%
ATGTTTATCTTTCCCTTCAA+TGG + chr4_4:355049-355068 Msa0662600:intron 30.0%
TGTTTATCTTTCCCTTCAAT+GGG + chr4_4:355050-355069 Msa0662600:intron 30.0%
AGATCATCATGTGATTTGAT+TGG + chr4_4:355328-355347 Msa0662600:intron 30.0%
GATCATCATGTGATTTGATT+GGG + chr4_4:355329-355348 Msa0662600:intron 30.0%
! TATTATAAGGGCATATGCTA+CGG - chr4_4:355471-355490 None:intergenic 30.0%
ATCTAGCATGGAAGAATAAA+CGG - chr4_4:355542-355561 None:intergenic 30.0%
TGAATCAGATTCGTTTATCT+GGG - chr4_4:355584-355603 None:intergenic 30.0%
TTTCAAAATATCAAGCGACA+TGG + chr4_4:355702-355721 Msa0662600:CDS 30.0%
! AGATGTGAAAAAGCTTTTGT+TGG + chr4_4:355934-355953 Msa0662600:CDS 30.0%
! AATTCAAAGGAAGGACTTTT+TGG + chr4_4:355990-356009 Msa0662600:CDS 30.0%
!!! GATGATGAGTTTTAGAAACT+TGG + chr4_4:356032-356051 Msa0662600:CDS 30.0%
TAGAAACTTGGAAGATGTAA+TGG + chr4_4:356044-356063 Msa0662600:CDS 30.0%
AGTATTATACTCCCAATAAG+TGG - chr4_4:356369-356388 None:intergenic 30.0%
!! ATTAATTTGCCAATGGTTAC+CGG - chr4_4:356417-356436 None:intergenic 30.0%
!! CCATCTTATTAATTTGCCAA+TGG - chr4_4:356424-356443 None:intergenic 30.0%
CCATTGGCAAATTAATAAGA+TGG + chr4_4:356421-356440 Msa0662600:three_prime_UTR 30.0%
TGAAAACAATACTTCTTCAG+AGG - chr4_4:356490-356509 None:intergenic 30.0%
TGTCATGAGAATAAACTTCT+AGG - chr4_4:356558-356577 None:intergenic 30.0%
TGAATGTGAGCACAAAAGAA+GGG + chr4_4:351786-351805 Msa0662600:five_prime_UTR 35.0%
!! TACATTGGATAATGGGTGTT+TGG + chr4_4:351899-351918 Msa0662600:five_prime_UTR 35.0%
! TGCAAAACTTGTTCTTTACG+AGG - chr4_4:351950-351969 None:intergenic 35.0%
!! AAACCAAACAGGTTCTAGAT+AGG - chr4_4:352368-352387 None:intergenic 35.0%
AAGCTATCTTGTAGAGCTTA+TGG - chr4_4:352494-352513 None:intergenic 35.0%
ATAGAACTTTGATTCCGGTA+AGG - chr4_4:352739-352758 None:intergenic 35.0%
TACCGGAATCAAAGTTCTAT+AGG + chr4_4:352739-352758 Msa0662600:CDS 35.0%
ACCGGAATCAAAGTTCTATA+GGG + chr4_4:352740-352759 Msa0662600:CDS 35.0%
ACCCTATAGAACTTTGATTC+CGG - chr4_4:352744-352763 None:intergenic 35.0%
AAAAGCAGACAGCAAAAAGT+GGG - chr4_4:352779-352798 None:intergenic 35.0%
AAAAAGCAGACAGCAAAAAG+TGG - chr4_4:352780-352799 None:intergenic 35.0%
TAGATAAAGGTGGATGAGAA+TGG + chr4_4:352869-352888 Msa0662600:intron 35.0%
AGTCCGAGTAATATAGTAAG+TGG + chr4_4:352896-352915 Msa0662600:CDS 35.0%
TCGCCACTTACTATATTACT+CGG - chr4_4:352902-352921 None:intergenic 35.0%
TTCATCAGTTTGTAGTGATG+AGG + chr4_4:352925-352944 Msa0662600:CDS 35.0%
TCATCAGTTTGTAGTGATGA+GGG + chr4_4:352926-352945 Msa0662600:CDS 35.0%
TTTGGATTCTTTGCCAACTT+CGG + chr4_4:352991-353010 Msa0662600:CDS 35.0%
CTTAAACACACCACTTAAGT+CGG + chr4_4:353120-353139 Msa0662600:CDS 35.0%
! TTTGAAATCTCTTGAGTGAC+TGG - chr4_4:353195-353214 None:intergenic 35.0%
CTATTGTGAGTAACTGGAAT+GGG - chr4_4:353247-353266 None:intergenic 35.0%
TTGTCTCCAATCAAGAGTAA+TGG + chr4_4:353271-353290 Msa0662600:CDS 35.0%
ATTACATGAGCTGCATTCTT+CGG - chr4_4:353307-353326 None:intergenic 35.0%
!! ACGAGGAATAGAGTTTTATC+AGG + chr4_4:353370-353389 Msa0662600:CDS 35.0%
!! AGGAATAGAGTTTTATCAGG+CGG + chr4_4:353373-353392 Msa0662600:CDS 35.0%
TTGAAGAGTTGCCATTGTTT+GGG - chr4_4:353486-353505 None:intergenic 35.0%
TTTGAAGAGTTGCCATTGTT+TGG - chr4_4:353487-353506 None:intergenic 35.0%
AACTCTTCAAATTGTAAGCC+TGG + chr4_4:353496-353515 Msa0662600:CDS 35.0%
! CAAAGGTACATCATCATTCA+AGG + chr4_4:353540-353559 Msa0662600:CDS 35.0%
!!! TTGTTTTTGGCTTGCATTGT+AGG - chr4_4:353640-353659 None:intergenic 35.0%
!! TCTGCTTTGAACGTTGTTTT+TGG - chr4_4:353653-353672 None:intergenic 35.0%
TCATCTTCAGAAAGTTCTAC+TGG + chr4_4:353910-353929 Msa0662600:CDS 35.0%
ATGTCAATGTTCAGCCTAAA+AGG + chr4_4:353965-353984 Msa0662600:CDS 35.0%
! AAGAAAAAGTATGACAGCAG+AGG + chr4_4:354054-354073 Msa0662600:CDS 35.0%
ATGGAAACCAGAACTAGATT+TGG + chr4_4:354273-354292 Msa0662600:CDS 35.0%
TATGGTTAACACCAATACCA+TGG + chr4_4:354503-354522 Msa0662600:CDS 35.0%
TTCATCTTGTTCCATGGTAT+TGG - chr4_4:354517-354536 None:intergenic 35.0%
GAACATTTCATCTTGTTCCA+TGG - chr4_4:354523-354542 None:intergenic 35.0%
!! TTTTGACTATGTGTTGGACT+TGG - chr4_4:354727-354746 None:intergenic 35.0%
AAACTGCAGACAACCTAATT+TGG - chr4_4:354823-354842 None:intergenic 35.0%
TTGTACAGACATCAGAAGTA+AGG + chr4_4:354893-354912 Msa0662600:intron 35.0%
TGTACAGACATCAGAAGTAA+GGG + chr4_4:354894-354913 Msa0662600:intron 35.0%
AAGTAACTTTCACTGACAGA+AGG - chr4_4:355003-355022 None:intergenic 35.0%
TTCTGTCAGTGAAAGTTACT+TGG + chr4_4:355002-355021 Msa0662600:CDS 35.0%
AACAAATAAGGCCCATTGAA+GGG - chr4_4:355064-355083 None:intergenic 35.0%
AAACAAATAAGGCCCATTGA+AGG - chr4_4:355065-355084 None:intergenic 35.0%
CTAACAAGTTTGTAACACAC+AGG - chr4_4:355216-355235 None:intergenic 35.0%
CATGATGATCTCACTTTGTT+AGG - chr4_4:355319-355338 None:intergenic 35.0%
CGGAAAAGCAACAAATTTCA+TGG - chr4_4:355451-355470 None:intergenic 35.0%
GAAAACAGGAAGAAACTGAT+CGG - chr4_4:355511-355530 None:intergenic 35.0%
! ATCAGTTTCTTCCTGTTTTC+AGG + chr4_4:355511-355530 Msa0662600:intron 35.0%
AGATACTTCTTCATCTAGCA+TGG - chr4_4:355554-355573 None:intergenic 35.0%
GTGAATCAGATTCGTTTATC+TGG - chr4_4:355585-355604 None:intergenic 35.0%
CACTTGAAAATGAAGTGACA+TGG + chr4_4:355602-355621 Msa0662600:CDS 35.0%
AATATGTGGAACACCAAACA+TGG + chr4_4:355675-355694 Msa0662600:CDS 35.0%
TATGGCAGAAGAATTTGTCA+TGG + chr4_4:355765-355784 Msa0662600:CDS 35.0%
ATGGCAGAAGAATTTGTCAT+GGG + chr4_4:355766-355785 Msa0662600:CDS 35.0%
TCCAACAGATCAAAGAGATT+TGG - chr4_4:355814-355833 None:intergenic 35.0%
ACATCAGGTACATCATATTG+TGG + chr4_4:355847-355866 Msa0662600:CDS 35.0%
AAGATCACTCTAAGCTTGAA+AGG + chr4_4:355872-355891 Msa0662600:CDS 35.0%
!! CTTTTTCACATCTCAACTCT+AGG - chr4_4:355927-355946 None:intergenic 35.0%
TTGTTGGAAGTTGCAAATCA+TGG + chr4_4:355950-355969 Msa0662600:CDS 35.0%
! TTTTGGCAGATGAGTTATAC+AGG + chr4_4:356007-356026 Msa0662600:CDS 35.0%
TTTGGCAGATGAGTTATACA+GGG + chr4_4:356008-356027 Msa0662600:CDS 35.0%
AAACTTGGAAGATGTAATGG+TGG + chr4_4:356047-356066 Msa0662600:CDS 35.0%
! TGACATTGAAGCATTTGAAG+AGG + chr4_4:356122-356141 Msa0662600:CDS 35.0%
! GACATTGAAGCATTTGAAGA+GGG + chr4_4:356123-356142 Msa0662600:CDS 35.0%
! ACATTGAAGCATTTGAAGAG+GGG + chr4_4:356124-356143 Msa0662600:CDS 35.0%
AGACTGTTTGATTGATGAGA+TGG + chr4_4:356170-356189 Msa0662600:CDS 35.0%
AATATTGTAGTACTGCCCAA+TGG - chr4_4:356342-356361 None:intergenic 35.0%
GAGCTTAGTTATATGGTAAC+CGG + chr4_4:356395-356414 Msa0662600:three_prime_UTR 35.0%
GAAACAGTACAATTGTACAG+GGG - chr4_4:356468-356487 None:intergenic 35.0%
GGAAACAGTACAATTGTACA+GGG - chr4_4:356469-356488 None:intergenic 35.0%
AGGAAACAGTACAATTGTAC+AGG - chr4_4:356470-356489 None:intergenic 35.0%
!! AGGTGTTGTTGTTGTCACTT+GGG - chr4_4:351702-351721 None:intergenic 40.0%
!! AAGGTGTTGTTGTTGTCACT+TGG - chr4_4:351703-351722 None:intergenic 40.0%
TTCAGAGCAAAGAGATCTGT+GGG - chr4_4:351770-351789 None:intergenic 40.0%
ATTCAGAGCAAAGAGATCTG+TGG - chr4_4:351771-351790 None:intergenic 40.0%
CTGAATGTGAGCACAAAAGA+AGG + chr4_4:351785-351804 Msa0662600:five_prime_UTR 40.0%
!! CAATTCTGTTTCTGACTGAG+TGG + chr4_4:351968-351987 Msa0662600:five_prime_UTR 40.0%
AATCTCGTAAGAAGCTCGTT+TGG + chr4_4:352244-352263 Msa0662600:CDS 40.0%
TGGAACAATCAAACCTTACC+TGG + chr4_4:352264-352283 Msa0662600:CDS 40.0%
GTGGCATGATTAACATTACC+AGG - chr4_4:352285-352304 None:intergenic 40.0%
CATCAACTGCAGAAGTTTCA+AGG + chr4_4:352691-352710 Msa0662600:intron 40.0%
GGAAAATCTAGAGACCTTAC+CGG + chr4_4:352722-352741 Msa0662600:CDS 40.0%
AAAGCAGACAGCAAAAAGTG+GGG - chr4_4:352778-352797 None:intergenic 40.0%
CATCAGTTTGTAGTGATGAG+GGG + chr4_4:352927-352946 Msa0662600:CDS 40.0%
! ATTAGTCTAGCTACTAACCC+GGG - chr4_4:352968-352987 None:intergenic 40.0%
! CATTAGTCTAGCTACTAACC+CGG - chr4_4:352969-352988 None:intergenic 40.0%
! GGGTTAGTAGCTAGACTAAT+GGG + chr4_4:352968-352987 Msa0662600:CDS 40.0%
!! AGTAGCTAGACTAATGGGTT+TGG + chr4_4:352973-352992 Msa0662600:CDS 40.0%
TTAAGTCGGAGAAGTCTTCT+TGG + chr4_4:353134-353153 Msa0662600:CDS 40.0%
TAAGTCGGAGAAGTCTTCTT+GGG + chr4_4:353135-353154 Msa0662600:CDS 40.0%
TTTATGTGCCCTTGATTCCA+TGG - chr4_4:353164-353183 None:intergenic 40.0%
! GGAATCAAGGGCACATAAAA+TGG + chr4_4:353165-353184 Msa0662600:CDS 40.0%
TGAAATGTTGCCTCCAAAGT+CGG + chr4_4:353216-353235 Msa0662600:CDS 40.0%
CCTATTGTGAGTAACTGGAA+TGG - chr4_4:353248-353267 None:intergenic 40.0%
CCATTCCAGTTACTCACAAT+AGG + chr4_4:353245-353264 Msa0662600:CDS 40.0%
GAAGAATGCAGCTCATGTAA+TGG + chr4_4:353306-353325 Msa0662600:CDS 40.0%
TATTCCTCGTATATGGCTGA+GGG - chr4_4:353360-353379 None:intergenic 40.0%
!! GGAATAGAGTTTTATCAGGC+GGG + chr4_4:353374-353393 Msa0662600:CDS 40.0%
!! TCGACTAGCTTTCTAGACAT+GGG - chr4_4:353463-353482 None:intergenic 40.0%
AAATTAGAACTCCTCTCACC+AGG - chr4_4:353517-353536 None:intergenic 40.0%
CGTTCAAAGCAGAGATACAA+TGG + chr4_4:353660-353679 Msa0662600:CDS 40.0%
TTAAGTCAAACCAGCTCACA+AGG + chr4_4:353731-353750 Msa0662600:CDS 40.0%
! CTCGGTTTGTATTTGGTTTC+TGG - chr4_4:353759-353778 None:intergenic 40.0%
AAAACGTGTGCAAACCGTAA+TGG + chr4_4:353790-353809 Msa0662600:CDS 40.0%
GAAGATGAAACTCGTGTTGT+CGG - chr4_4:353898-353917 None:intergenic 40.0%
AAGTTCTACTGGAGTCAGAA+AGG + chr4_4:353921-353940 Msa0662600:CDS 40.0%
AGTCAGAAAGGCAACAAACA+AGG + chr4_4:353933-353952 Msa0662600:CDS 40.0%
GTCAGAAAGGCAACAAACAA+GGG + chr4_4:353934-353953 Msa0662600:CDS 40.0%
TAGGGCAATCAATAACCGAA+AGG + chr4_4:353996-354015 Msa0662600:CDS 40.0%
! GTCAACACCAAATCTAGTTC+TGG - chr4_4:354283-354302 None:intergenic 40.0%
!! AGATTTGGTGTTGACTCTCT+TGG + chr4_4:354288-354307 Msa0662600:CDS 40.0%
!! GATTTGGTGTTGACTCTCTT+GGG + chr4_4:354289-354308 Msa0662600:CDS 40.0%
TGATGCATTGAGTGTCTTGT+TGG + chr4_4:354371-354390 Msa0662600:CDS 40.0%
CTAGATCTCAAACCAGTAGA+AGG - chr4_4:354462-354481 None:intergenic 40.0%
!! GGTATTGGTGTTAACCATAC+TGG - chr4_4:354502-354521 None:intergenic 40.0%
!! TGCTGATTCATGTTAAGCAC+TGG - chr4_4:354597-354616 None:intergenic 40.0%
TAACATGAATCAGCAACTGC+AGG + chr4_4:354602-354621 Msa0662600:CDS 40.0%
TGTAGCAGCAACAATGAAAG+TGG + chr4_4:354928-354947 Msa0662600:CDS 40.0%
AACACACAGGTGCAACATAA+AGG - chr4_4:355203-355222 None:intergenic 40.0%
TCAAAGCTCTTCCATGTCTA+TGG + chr4_4:355630-355649 Msa0662600:CDS 40.0%
CAAAGCTCTTCCATGTCTAT+GGG + chr4_4:355631-355650 Msa0662600:CDS 40.0%
AAAGCTCTTCCATGTCTATG+GGG + chr4_4:355632-355651 Msa0662600:CDS 40.0%
ACTTGGCAACACAGAGTTTA+TGG + chr4_4:355747-355766 Msa0662600:CDS 40.0%
GCCAAATCTCTTTGATCTGT+TGG + chr4_4:355810-355829 Msa0662600:CDS 40.0%
ATGTACCTGATGTACTCTGA+TGG - chr4_4:355840-355859 None:intergenic 40.0%
TCACTCTAAGCTTGAAAGGA+AGG + chr4_4:355876-355895 Msa0662600:CDS 40.0%
TTGCAAATCATGGCCTAGAT+GGG + chr4_4:355960-355979 Msa0662600:CDS 40.0%
TGAATTGATGTCACCCATCT+AGG - chr4_4:355976-355995 None:intergenic 40.0%
GATGGGTGACATCAATTCAA+AGG + chr4_4:355977-355996 Msa0662600:CDS 40.0%
GGTGACATCAATTCAAAGGA+AGG + chr4_4:355981-356000 Msa0662600:CDS 40.0%
!! AATGACATGAGCACTGGATA+TGG + chr4_4:356084-356103 Msa0662600:CDS 40.0%
!! ATGACATGAGCACTGGATAT+GGG + chr4_4:356085-356104 Msa0662600:CDS 40.0%
! TACATAATGGAAGCTACCAG+GGG - chr4_4:356224-356243 None:intergenic 40.0%
! CTACATAATGGAAGCTACCA+GGG - chr4_4:356225-356244 None:intergenic 40.0%
! ACTACATAATGGAAGCTACC+AGG - chr4_4:356226-356245 None:intergenic 40.0%
CTGACAAAGAAACACTGAAG+TGG + chr4_4:356285-356304 Msa0662600:three_prime_UTR 40.0%
! AGTCCCTCATGTTTTTCCAT+TGG + chr4_4:356323-356342 Msa0662600:three_prime_UTR 40.0%
! GTCCCTCATGTTTTTCCATT+GGG + chr4_4:356324-356343 Msa0662600:three_prime_UTR 40.0%
TGCCCAATGGAAAAACATGA+GGG - chr4_4:356329-356348 None:intergenic 40.0%
ATATGGTAACCGGTAACCAT+TGG + chr4_4:356405-356424 Msa0662600:three_prime_UTR 40.0%
TCAGAGCAAAGAGATCTGTG+GGG - chr4_4:351769-351788 None:intergenic 45.0%
!! TCTGTTTCTGACTGAGTGGA+AGG + chr4_4:351972-351991 Msa0662600:five_prime_UTR 45.0%
!! CTGTTTCTGACTGAGTGGAA+GGG + chr4_4:351973-351992 Msa0662600:five_prime_UTR 45.0%
GTGGAAGGGTTTCTCGTATA+AGG + chr4_4:351987-352006 Msa0662600:five_prime_UTR 45.0%
!! GGTTCTAGATAGGTGGACAA+AGG - chr4_4:352358-352377 None:intergenic 45.0%
!! CCAAACAGGTTCTAGATAGG+TGG - chr4_4:352365-352384 None:intergenic 45.0%
! CCACCTATCTAGAACCTGTT+TGG + chr4_4:352362-352381 Msa0662600:intron 45.0%
AACTGCAGAAGTTTCAAGGC+AGG + chr4_4:352695-352714 Msa0662600:intron 45.0%
ACTGCAGAAGTTTCAAGGCA+GGG + chr4_4:352696-352715 Msa0662600:intron 45.0%
AGAAGTTTCAAGGCAGGGAA+AGG + chr4_4:352701-352720 Msa0662600:intron 45.0%
AAGCAGACAGCAAAAAGTGG+GGG - chr4_4:352777-352796 None:intergenic 45.0%
! TTTGTAGTGATGAGGGGTGT+GGG + chr4_4:352933-352952 Msa0662600:CDS 45.0%
!! CGGGTTAGTAGCTAGACTAA+TGG + chr4_4:352967-352986 Msa0662600:CDS 45.0%
GAAGACTTCTCCGACTTAAG+TGG - chr4_4:353133-353152 None:intergenic 45.0%
TTGGGATGCCATGGAATCAA+GGG + chr4_4:353153-353172 Msa0662600:CDS 45.0%
GAATGCAGCTCATGTAATGG+AGG + chr4_4:353309-353328 Msa0662600:CDS 45.0%
GCGGCTGCTAAGATAATTGA+TGG + chr4_4:353331-353350 Msa0662600:CDS 45.0%
CTATTCCTCGTATATGGCTG+AGG - chr4_4:353361-353380 None:intergenic 45.0%
!! GTCGACTAGCTTTCTAGACA+TGG - chr4_4:353464-353483 None:intergenic 45.0%
AAGCTAGTCGACCCAAACAA+TGG + chr4_4:353472-353491 Msa0662600:CDS 45.0%
CAAATTGTAAGCCTGGTGAG+AGG + chr4_4:353503-353522 Msa0662600:CDS 45.0%
! GGCAATGCTCGGTTTGTATT+TGG - chr4_4:353766-353785 None:intergenic 45.0%
AAACCGTAATGGCAATGTGC+TGG + chr4_4:353801-353820 Msa0662600:CDS 45.0%
GTACCAGCACATTGCCATTA+CGG - chr4_4:353807-353826 None:intergenic 45.0%
!! AACTCGTGTTGTCGGCTTAT+TGG - chr4_4:353890-353909 None:intergenic 45.0%
AGCCTAAAAGGTCAAGCTCT+AGG + chr4_4:353977-353996 Msa0662600:CDS 45.0%
GCCTAAAAGGTCAAGCTCTA+GGG + chr4_4:353978-353997 Msa0662600:CDS 45.0%
! TCTGGTTTCCATCACTTGCT+CGG - chr4_4:354265-354284 None:intergenic 45.0%
! TCTGAGATTACGGTACACTG+AGG - chr4_4:354435-354454 None:intergenic 45.0%
TCAGTGTACCGTAATCTCAG+AGG + chr4_4:354434-354453 Msa0662600:CDS 45.0%
!! AGAAGGCTCCTCTGAGATTA+CGG - chr4_4:354445-354464 None:intergenic 45.0%
! GCAAGACAAAGCATCCAGTA+TGG + chr4_4:354485-354504 Msa0662600:CDS 45.0%
CTATCGCTGTTGTTCAAGTG+AGG + chr4_4:354569-354588 Msa0662600:CDS 45.0%
TAGACTCAGTAAATGGCGTG+TGG - chr4_4:354795-354814 None:intergenic 45.0%
GACAGTGAAGACAGTGCATA+TGG + chr4_4:355024-355043 Msa0662600:CDS 45.0%
CACATATTGCCCCATAGACA+TGG - chr4_4:355644-355663 None:intergenic 45.0%
CATGTCTATGGGGCAATATG+TGG + chr4_4:355642-355661 Msa0662600:CDS 45.0%
GTGGCTGTCACACAAATATG+TGG + chr4_4:355661-355680 Msa0662600:CDS 45.0%
GAGAACCATCAGAGTACATC+AGG + chr4_4:355832-355851 Msa0662600:CDS 45.0%
GTTGCAAATCATGGCCTAGA+TGG + chr4_4:355959-355978 Msa0662600:CDS 45.0%
!! TGAGCACTGGATATGGGAAA+TGG + chr4_4:356091-356110 Msa0662600:CDS 45.0%
TGCTTGTTTAACTAACCCCC+TGG + chr4_4:356205-356224 Msa0662600:exon 45.0%
! ACATAATGGAAGCTACCAGG+GGG - chr4_4:356223-356242 None:intergenic 45.0%
CTGCCCAATGGAAAAACATG+AGG - chr4_4:356330-356349 None:intergenic 45.0%
CAGTACAATTGTACAGGGGA+GGG - chr4_4:356464-356483 None:intergenic 45.0%
ACAGTACAATTGTACAGGGG+AGG - chr4_4:356465-356484 None:intergenic 45.0%
!!! TTTTATTTGATTTATTTTTT+TGG + chr4_4:352826-352845 Msa0662600:intron 5.0%
! AGAGAGAGAGAGAGGTGTGA+AGG - chr4_4:351722-351741 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr4_4:351728-351747 None:intergenic 50.0%
AGAGCAAAGAGATCTGTGGG+GGG - chr4_4:351767-351786 None:intergenic 50.0%
CAGAGCAAAGAGATCTGTGG+GGG - chr4_4:351768-351787 None:intergenic 50.0%
TAGAGAGAGAGAGAGAGACG+TGG - chr4_4:352304-352323 None:intergenic 50.0%
AGCAGACAGCAAAAAGTGGG+GGG - chr4_4:352776-352795 None:intergenic 50.0%
GTTTGTAGTGATGAGGGGTG+TGG + chr4_4:352932-352951 Msa0662600:CDS 50.0%
TCTTTGCCAACTTCGGACGT+CGG + chr4_4:352998-353017 Msa0662600:CDS 50.0%
GGAGCTGAATAGTGAAGCAC+CGG - chr4_4:353032-353051 None:intergenic 50.0%
CATGGATGACTATCGTCGTG+CGG + chr4_4:353093-353112 Msa0662600:CDS 50.0%
GAAGTCTTCTTGGGATGCCA+TGG + chr4_4:353144-353163 Msa0662600:CDS 50.0%
CTTGGGATGCCATGGAATCA+AGG + chr4_4:353152-353171 Msa0662600:CDS 50.0%
! ATGGGTTTAGCCGACTTTGG+AGG - chr4_4:353229-353248 None:intergenic 50.0%
! GGAATGGGTTTAGCCGACTT+TGG - chr4_4:353232-353251 None:intergenic 50.0%
ACATGAGCTGCATTCTTCGG+CGG - chr4_4:353304-353323 None:intergenic 50.0%
! TGCAGCTCATGTAATGGAGG+CGG + chr4_4:353312-353331 Msa0662600:CDS 50.0%
! ACGTTTTCTGCGGCAATGCT+CGG - chr4_4:353777-353796 None:intergenic 50.0%
! CGGTTTGCACACGTTTTCTG+CGG - chr4_4:353787-353806 None:intergenic 50.0%
! GCCCTAGAGCTTGACCTTTT+AGG - chr4_4:353982-354001 None:intergenic 50.0%
TGGATGGGGGAAACTCCTTT+CGG - chr4_4:354014-354033 None:intergenic 50.0%
TGATCAGGACTTCTTGCCTC+AGG - chr4_4:354084-354103 None:intergenic 50.0%
TCGGGCACACTTCTCTTCAA+GGG - chr4_4:354228-354247 None:intergenic 50.0%
ATCTCAGAGGAGCCTTCTAC+TGG + chr4_4:354447-354466 Msa0662600:CDS 50.0%
GGTTGTCAGCATTCTGATGC+TGG + chr4_4:354961-354980 Msa0662600:CDS 50.0%
CAGGAAGAAACTGATCGGCA+CGG - chr4_4:355506-355525 None:intergenic 50.0%
!! AAACGGTGCTGCCTGAAAAC+AGG - chr4_4:355525-355544 None:intergenic 50.0%
GTCTGCAATGACATGAGCAC+TGG + chr4_4:356078-356097 Msa0662600:CDS 50.0%
AGCATTTGAAGAGGGGTCAG+AGG + chr4_4:356131-356150 Msa0662600:CDS 50.0%
AAGAGGGGTCAGAGGTTGAA+GGG + chr4_4:356139-356158 Msa0662600:CDS 50.0%
!! TGAGGGTGCTCTTCGTTCCA+TGG + chr4_4:353075-353094 Msa0662600:CDS 55.0%
CGCACGACGATAGTCATCCA+TGG - chr4_4:353095-353114 None:intergenic 55.0%
GAAGCCCTCAGCCATATACG+AGG + chr4_4:353353-353372 Msa0662600:CDS 55.0%
!! GTTTCTGGCTCCTTGTGAGC+TGG - chr4_4:353744-353763 None:intergenic 55.0%
!! TGACAGCAGAGGTGTTCCTG+AGG + chr4_4:354065-354084 Msa0662600:CDS 55.0%
CTCGGGCACACTTCTCTTCA+AGG - chr4_4:354229-354248 None:intergenic 55.0%
TCGGCAGAGGATAGTGACTC+GGG - chr4_4:354246-354265 None:intergenic 55.0%
CTCGGCAGAGGATAGTGACT+CGG - chr4_4:354247-354266 None:intergenic 55.0%
ATCCTCTGCCGAGCAAGTGA+TGG + chr4_4:354254-354273 Msa0662600:CDS 55.0%
TTCCATCACTTGCTCGGCAG+AGG - chr4_4:354259-354278 None:intergenic 55.0%
GAAGAGGGGTCAGAGGTTGA+AGG + chr4_4:356138-356157 Msa0662600:CDS 55.0%
AGAGGGGTCAGAGGTTGAAG+GGG + chr4_4:356140-356159 Msa0662600:CDS 55.0%
GGGTGTGGGAGTAAAGCTCC+CGG + chr4_4:352947-352966 Msa0662600:CDS 60.0%
GGTGTGGGAGTAAAGCTCCC+GGG + chr4_4:352948-352967 Msa0662600:CDS 60.0%
AGCTCACCGACGTCCGAAGT+TGG - chr4_4:353007-353026 None:intergenic 60.0%
TCGGACGTCGGTGAGCTCTC+CGG + chr4_4:353010-353029 Msa0662600:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 351694 356580 351694 ID=Msa0662600;Name=Msa0662600
chr4_4 mRNA 351694 356580 351694 ID=Msa0662600-mRNA-1;Parent=Msa0662600;Name=Msa0662600-mRNA-1;_AED=0.01;_eAED=0.01;_QI=312|1|1|1|0.66|0.71|7|365|911
chr4_4 exon 351694 351727 351694 ID=Msa0662600-mRNA-1:exon:108;Parent=Msa0662600-mRNA-1
chr4_4 exon 351750 352008 351750 ID=Msa0662600-mRNA-1:exon:109;Parent=Msa0662600-mRNA-1
chr4_4 exon 352170 352285 352170 ID=Msa0662600-mRNA-1:exon:110;Parent=Msa0662600-mRNA-1
chr4_4 exon 352703 352761 352703 ID=Msa0662600-mRNA-1:exon:111;Parent=Msa0662600-mRNA-1
chr4_4 exon 352872 354623 352872 ID=Msa0662600-mRNA-1:exon:112;Parent=Msa0662600-mRNA-1
chr4_4 exon 354901 355045 354901 ID=Msa0662600-mRNA-1:exon:113;Parent=Msa0662600-mRNA-1
chr4_4 exon 355533 356580 355533 ID=Msa0662600-mRNA-1:exon:114;Parent=Msa0662600-mRNA-1
chr4_4 five_prime_UTR 351694 351727 351694 ID=Msa0662600-mRNA-1:five_prime_utr;Parent=Msa0662600-mRNA-1
chr4_4 five_prime_UTR 351750 352008 351750 ID=Msa0662600-mRNA-1:five_prime_utr;Parent=Msa0662600-mRNA-1
chr4_4 five_prime_UTR 352170 352188 352170 ID=Msa0662600-mRNA-1:five_prime_utr;Parent=Msa0662600-mRNA-1
chr4_4 CDS 352189 352285 352189 ID=Msa0662600-mRNA-1:cds;Parent=Msa0662600-mRNA-1
chr4_4 CDS 352703 352761 352703 ID=Msa0662600-mRNA-1:cds;Parent=Msa0662600-mRNA-1
chr4_4 CDS 352872 354623 352872 ID=Msa0662600-mRNA-1:cds;Parent=Msa0662600-mRNA-1
chr4_4 CDS 354901 355045 354901 ID=Msa0662600-mRNA-1:cds;Parent=Msa0662600-mRNA-1
chr4_4 CDS 355533 356215 355533 ID=Msa0662600-mRNA-1:cds;Parent=Msa0662600-mRNA-1
chr4_4 three_prime_UTR 356216 356580 356216 ID=Msa0662600-mRNA-1:three_prime_utr;Parent=Msa0662600-mRNA-1
Gene Sequence

>Msa0662600

ATGGAGAAAAAACGTTCAAAAGGAAATTTCTTTAGCCTGTTTGATTGGAATTCTAAATCTCGTAAGAAGCTCGTTTGGAACAATCAAACCTTACCTGAAGTTTCAAGGCAGGGAAAGGAAAATCTAGAGACCTTACCGGAATCAAAGTTCTATAGGATAAAGGTGGATGAGAATGGAGCAAGTCCGAGTAATATAGTAAGTGGCGATTTTTCATCAGTTTGTAGTGATGAGGGGTGTGGGAGTAAAGCTCCCGGGTTAGTAGCTAGACTAATGGGTTTGGATTCTTTGCCAACTTCGGACGTCGGTGAGCTCTCCGGTGCTTCACTATTCAGCTCCAACTTTCATGCTTCTCATTATAATGAGGGTGCTCTTCGTTCCATGGATGACTATCGTCGTGCGGACTACTTAAACACACCACTTAAGTCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAAATGGAAGACCAGTCACTCAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCGGCTAAACCCATTCCAGTTACTCACAATAGGTTATTGTCTCCAATCAAGAGTAATGGTTTTCTGCCGCCGAAGAATGCAGCTCATGTAATGGAGGCGGCTGCTAAGATAATTGATGGAAGCCCTCAGCCATATACGAGGAATAGAGTTTTATCAGGCGGGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAACATGCACCCATGTCTAGAAAGCTAGTCGACCCAAACAATGGCAACTCTTCAAATTGTAAGCCTGGTGAGAGGAGTTCTAATTTTGACAAAGGTACATCATCATTCAAGGGTTCAAGTTCAAGTTCAAGAGATTCTGAAAAACGTAATTATTCTCATTTAACAAGTAAAGGAAAATCAGGTTCTCCTACAATGCAAGCCAAAAACAACGTTCAAAGCAGAGATACAATGGTTTCAAATGGAAATAGGAAATATATGAAGCAGAAAGAACCGAATGAGATTAAGTCAAACCAGCTCACAAGGAGCCAGAAACCAAATACAAACCGAGCATTGCCGCAGAAAACGTGTGCAAACCGTAATGGCAATGTGCTGGTACAGAATAATCAAAAGCAAAATAGTATGACTTCCAAAGGTAAATCAACTTCAAAAATAGATTCCAATAAGCCGACAACACGAGTTTCATCTTCAGAAAGTTCTACTGGAGTCAGAAAGGCAACAAACAAGGGTGCTACAAATGTCAATGTTCAGCCTAAAAGGTCAAGCTCTAGGGCAATCAATAACCGAAAGGAGTTTCCCCCATCCAAAACACATAATATTTCTCAAAAGAAAAAGTATGACAGCAGAGGTGTTCCTGAGGCAAGAAGTCCTGATCATGAAAGAAATGATTTTGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGAATGCATTTAACATGAATGAAAGCAATGACGTTGTTTCATTTACATTTACGTCTCCCTTGAAGAGAAGTGTGCCCGAGTCACTATCCTCTGCCGAGCAAGTGATGGAAACCAGAACTAGATTTGGTGTTGACTCTCTTGGGCATAATGATAATCTCCATCCCAAAAAATTATTGCTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTCTTGTTGGAGCAAAAGCTGCAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCGTAATCTCAGAGGAGCCTTCTACTGGTTTGAGATCTAGTTTGCAAGACAAAGCATCCAGTATGGTTAACACCAATACCATGGAACAAGATGAAATGTTCATTGATAATTTTAATAGCATGCATAACTATCGCTGTTGTTCAAGTGAGGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATCAGAAGTAAGGGAAGATCATAGCTGTAGCAGCAACAATGAAAGTGGAAATGATCTAGGTTGTCAGCATTCTGATGCTGGTAAAAATTTTCAAGCTCCTTCTGTCAGTGAAAGTTACTTGGACAGTGAAGACAGTGCATATGGCAGCACCGTTTATTCTTCCATGCTAGATGAAGAAGTATCTAATATTTCCCAGATAAACGAATCTGATTCACTTGAAAATGAAGTGACATGGTCAGATCAAAGCTCTTCCATGTCTATGGGGCAATATGTGGCTGTCACACAAATATGTGGAACACCAAACATGGTAGATTTCAAAATATCAAGCGACATGGAGCTTGAATATGTACAGAAAATACTTGGCAACACAGAGTTTATGGCAGAAGAATTTGTCATGGGTCAAACTAATTCAGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAACCATCAGAGTACATCAGGTACATCATATTGTGGAGAAGATCACTCTAAGCTTGAAAGGAAGGTTTTATTTGACTATGTGAGTGAGTGCCTAGAGTTGAGATGTGAAAAAGCTTTTGTTGGAAGTTGCAAATCATGGCCTAGATGGGTGACATCAATTCAAAGGAAGGACTTTTTGGCAGATGAGTTATACAGGGAGATGATGAGTTTTAGAAACTTGGAAGATGTAATGGTGGATGAGCTTGTCTGCAATGACATGAGCACTGGATATGGGAAATGGCTTGACTTTGACATTGAAGCATTTGAAGAGGGGTCAGAGGTTGAAGGGGACATACTAGACTGTTTGATTGATGAGATGGTTTCTGATTTGTTGCTTGTTTAA
Protein sequence

>Msa0662600

MEKKRSKGNFFSLFDWNSKSRKKLVWNNQTLPEVSRQGKENLETLPESKFYRIKVDENGASPSNIVSGDFSSVCSDEGCGSKAPGLVARLMGLDSLPTSDVGELSGASLFSSNFHASHYNEGALRSMDDYRRADYLNTPLKSEKSSWDAMESRAHKMEDQSLKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGFLPPKNAAHVMEAAAKIIDGSPQPYTRNRVLSGGSSSVPLRILDLKERLEAAQHAPMSRKLVDPNNGNSSNCKPGERSSNFDKGTSSFKGSSSSSRDSEKRNYSHLTSKGKSGSPTMQAKNNVQSRDTMVSNGNRKYMKQKEPNEIKSNQLTRSQKPNTNRALPQKTCANRNGNVLVQNNQKQNSMTSKGKSTSKIDSNKPTTRVSSSESSTGVRKATNKGATNVNVQPKRSSSRAINNRKEFPPSKTHNISQKKKYDSRGVPEARSPDHERNDFESKSIKCNFTTDGSIDQNAFNMNESNDVVSFTFTSPLKRSVPESLSSAEQVMETRTRFGVDSLGHNDNLHPKKLLLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTVISEEPSTGLRSSLQDKASSMVNTNTMEQDEMFIDNFNSMHNYRCCSSEDPVLNMNQQLQTSEVREDHSCSSNNESGNDLGCQHSDAGKNFQAPSVSESYLDSEDSAYGSTVYSSMLDEEVSNISQINESDSLENEVTWSDQSSSMSMGQYVAVTQICGTPNMVDFKISSDMELEYVQKILGNTEFMAEEFVMGQTNSVIMPNLFDLLENHQSTSGTSYCGEDHSKLERKVLFDYVSECLELRCEKAFVGSCKSWPRWVTSIQRKDFLADELYREMMSFRNLEDVMVDELVCNDMSTGYGKWLDFDIEAFEEGSEVEGDILDCLIDEMVSDLLLV*