AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1398920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398920 MtrunA17_Chr7g0271711 93.969 912 52 2 1 911 1 910 0.0 1754
Msa1398920 MtrunA17_Chr1g0192581 46.224 874 335 26 52 911 5 757 0.0 590
Msa1398920 MtrunA17_Chr2g0294831 32.710 963 546 28 2 909 6 921 7.36e-114 370
Msa1398920 MtrunA17_Chr7g0250831 25.408 429 262 14 491 909 555 935 8.67e-20 95.1
Msa1398920 MtrunA17_Chr6g0457761 25.051 491 265 19 449 909 461 878 1.06e-17 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398920 AT5G26910.4 31.155 918 528 21 1 909 4 826 1.21e-106 350
Msa1398920 AT5G26910.1 31.155 918 528 21 1 909 4 826 1.21e-106 350
Msa1398920 AT5G26910.3 31.155 918 527 21 1 909 4 825 2.67e-105 346
Msa1398920 AT3G58650.1 32.051 936 480 39 1 909 4 810 2.12e-92 311
Msa1398920 AT5G26910.2 32.997 594 336 12 1 586 4 543 1.92e-63 226
Msa1398920 AT3G05750.1 33.665 603 321 19 1 585 7 548 2.22e-52 197
Msa1398920 AT3G05750.1 36.970 165 94 2 747 910 644 799 2.58e-24 110
Msa1398920 AT3G05750.4 34.336 565 301 20 33 585 34 540 2.92e-49 188
Msa1398920 AT3G05750.4 36.970 165 94 2 747 910 636 791 3.65e-24 109
Msa1398920 AT3G05750.3 33.598 503 268 19 91 585 1 445 6.95e-43 167
Msa1398920 AT3G05750.3 36.970 165 94 2 747 910 541 696 2.83e-24 109
Msa1398920 AT3G05750.2 33.598 503 268 19 91 585 1 445 6.95e-43 167
Msa1398920 AT3G05750.2 36.970 165 94 2 747 910 541 696 2.83e-24 109

Find 235 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGGTTTGTATTTGGTTTC+TGG 0.052036 tig0022300:-85013 None:intergenic
AATAATAATTTATCGAAATT+TGG 0.105688 tig0022300:-83098 None:intergenic
ACTTGGCAACACAGAGTTTA+TGG 0.185619 tig0022300:+87004 Msa1398920:CDS
ACAATATTATGACCACTTAT+TGG 0.198103 tig0022300:+87611 Msa1398920:three_prime_UTR
GTGAATCAGATTCGTTTATC+TGG 0.198909 tig0022300:-86839 None:intergenic
AACTCGTGTTGTCGGCTTAT+TGG 0.224076 tig0022300:-85144 None:intergenic
GGCAATGCTCGGTTTGTATT+TGG 0.230061 tig0022300:-85020 None:intergenic
TCAAAGCTCTTCCATGTCTA+TGG 0.251505 tig0022300:+86887 Msa1398920:CDS
CAATGGTTTCAAATGGAAAT+AGG 0.279755 tig0022300:+84934 Msa1398920:CDS
GGAATCAAGGGCACATAAAA+TGG 0.292716 tig0022300:+84422 Msa1398920:CDS
TTGAGAAATATTATGTGTTT+TGG 0.295276 tig0022300:-85288 None:intergenic
AAATTGCATACATTGGATAA+TGG 0.303822 tig0022300:+83151 Msa1398920:five_prime_UTR
TTTGAAGAGTTGCCATTGTT+TGG 0.325053 tig0022300:-84741 None:intergenic
CAATATTATGACCACTTATT+GGG 0.325488 tig0022300:+87612 Msa1398920:three_prime_UTR
AAAACTCTATTCCTCGTATA+TGG 0.327299 tig0022300:-84621 None:intergenic
ATGTCAATGTTCAGCCTAAA+AGG 0.330024 tig0022300:+85222 Msa1398920:CDS
TGTCATGAGAATAAACTTCT+AGG 0.330795 tig0022300:-87812 None:intergenic
AATAACCTATTGTGAGTAAC+TGG 0.338823 tig0022300:-84507 None:intergenic
TACCAGAATCAAAGTTCTAT+AGG 0.343436 tig0022300:+83997 Msa1398920:CDS
ATTTATCGAAATTTGGAAAA+GGG 0.347167 tig0022300:-83091 None:intergenic
TTCATCTTGTTCCATGGTAT+TGG 0.348152 tig0022300:-85771 None:intergenic
ATTTCTTTAGCCTGTTTGAT+TGG 0.349914 tig0022300:+83474 Msa1398920:CDS
TTATTATTTGTTTCGATTTG+CGG 0.349974 tig0022300:+83116 Msa1398920:five_prime_UTR
ATTAATTTGCCAATGGTTAC+CGG 0.354089 tig0022300:-87671 None:intergenic
TCCAACAGATCAAAGAGATT+TGG 0.354587 tig0022300:-87068 None:intergenic
TGATAAAGAGCTTAGTTATA+TGG 0.359210 tig0022300:+87645 Msa1398920:three_prime_UTR
TTAACAAGTAAAGGAAAATC+AGG 0.359427 tig0022300:+84867 Msa1398920:CDS
AAATCATTTCTTTCATGATC+AGG 0.359480 tig0022300:-85353 None:intergenic
AATTGCATACATTGGATAAT+GGG 0.359846 tig0022300:+83152 Msa1398920:five_prime_UTR
TCTTGATTTGAAAGAGAGAT+TGG 0.364775 tig0022300:+84677 Msa1398920:CDS
GTGGAAGGGTTTCTCGTATA+AGG 0.366604 tig0022300:+83247 Msa1398920:five_prime_UTR
TGAATTGATGTCACCCATCT+AGG 0.368625 tig0022300:-87230 None:intergenic
TTGAAGAGTTGCCATTGTTT+GGG 0.374946 tig0022300:-84740 None:intergenic
AATGACATGAGCACTGGATA+TGG 0.378953 tig0022300:+87341 Msa1398920:CDS
GATTTGGTGTTGACTCTCTT+GGG 0.382883 tig0022300:+85546 Msa1398920:CDS
GCCAAATCTCTTTGATCTGT+TGG 0.383800 tig0022300:+87067 Msa1398920:CDS
ACTTCATAAACACTACATAA+TGG 0.384326 tig0022300:-87491 None:intergenic
GTCAACACCAAATCTAGTTC+TGG 0.386085 tig0022300:-85537 None:intergenic
GTTGCAAATCATGGCCTAGA+TGG 0.388615 tig0022300:+87216 Msa1398920:CDS
TTAAGTCGGAGAAGTCTTCT+TGG 0.388727 tig0022300:+84391 Msa1398920:CDS
TGGTTTGACTTAATCTCATT+CGG 0.390079 tig0022300:-84978 None:intergenic
CATCAACTGCAGAAGTTTCA+AGG 0.394024 tig0022300:+83949 Msa1398920:intron
AGATTTGGTGTTGACTCTCT+TGG 0.399113 tig0022300:+85545 Msa1398920:CDS
TACATTGGATAATGGGTGTT+TGG 0.400505 tig0022300:+83159 Msa1398920:five_prime_UTR
ATTACATGAGCTGCATTCTT+CGG 0.400753 tig0022300:-84561 None:intergenic
TAGAAACTTGGAAGATGTAA+TGG 0.401841 tig0022300:+87301 Msa1398920:CDS
AGAAAACCATTACTCTTGAT+TGG 0.403562 tig0022300:-84534 None:intergenic
GTACCAGCACATTGCCATTA+CGG 0.403636 tig0022300:-85061 None:intergenic
CTAGATCTCAAACCAGTAGA+AGG 0.406206 tig0022300:-85716 None:intergenic
GAAGATGAAACTCGTGTTGT+CGG 0.408487 tig0022300:-85152 None:intergenic
AATCTCGTAAGAAGCTCGTT+TGG 0.415531 tig0022300:+83504 Msa1398920:CDS
AGTAGCTAGACTAATGGGTT+TGG 0.415757 tig0022300:+84230 Msa1398920:CDS
TTCTGTCAGTGAAAGTTACT+TGG 0.418753 tig0022300:+86259 Msa1398920:CDS
ACCCTATAGAACTTTGATTC+TGG 0.418940 tig0022300:-83999 None:intergenic
GTTTCTGGCTCCTTGTGAGC+TGG 0.419501 tig0022300:-84998 None:intergenic
CCATTCCAGTTACTCACAAT+AGG 0.420132 tig0022300:+84502 Msa1398920:CDS
ATCTAGCATGGAAGAATAAA+CGG 0.422941 tig0022300:-86796 None:intergenic
TTTATGTGCCCTTGATTCCA+TGG 0.428294 tig0022300:-84418 None:intergenic
TGATGCATTGAGTGTCTTGT+TGG 0.428531 tig0022300:+85628 Msa1398920:CDS
CTCGGGCACACTTCTCTTCA+AGG 0.429593 tig0022300:-85483 None:intergenic
TCATCTTCAGAAAGTTCTAC+TGG 0.430240 tig0022300:+85167 Msa1398920:CDS
AAGGTGTTGTTGTTGTCACT+TGG 0.430294 tig0022300:-82970 None:intergenic
TAGATAAAGGTGGATGAGAA+TGG 0.432322 tig0022300:+84126 Msa1398920:intron
ATGGAAACCAGAACTAGATT+TGG 0.433236 tig0022300:+85530 Msa1398920:CDS
GGAATGGGTTTAGCCGACTT+TGG 0.433498 tig0022300:-84486 None:intergenic
TATTCTCATTTAACAAGTAA+AGG 0.433553 tig0022300:+84858 Msa1398920:CDS
ACCAGAATCAAAGTTCTATA+GGG 0.434864 tig0022300:+83998 Msa1398920:CDS
GGGTTAGTAGCTAGACTAAT+GGG 0.436466 tig0022300:+84225 Msa1398920:CDS
GAAGAGGGGTCAGAGGTTGA+AGG 0.439614 tig0022300:+87395 Msa1398920:CDS
ATGATTAACATTACCAGGTA+AGG 0.444021 tig0022300:-83537 None:intergenic
GCAAGACAAAGCATCCAGTA+TGG 0.444703 tig0022300:+85742 Msa1398920:CDS
AATTTATCGAAATTTGGAAA+AGG 0.444907 tig0022300:-83092 None:intergenic
AGAAGGCTCCTCTGAGATTA+CGG 0.445668 tig0022300:-85699 None:intergenic
GAGCTTAGTTATATGGTAAC+CGG 0.445862 tig0022300:+87652 Msa1398920:three_prime_UTR
AATGAAAGTGGAAATGATCT+AGG 0.445864 tig0022300:+86197 Msa1398920:CDS
TCATGCTTCTCATTATAATG+AGG 0.446452 tig0022300:+84314 Msa1398920:CDS
ATTTAGAATTCCAATCAAAC+AGG 0.448534 tig0022300:-83484 None:intergenic
TTTGAAATCTCTTGAGTGAC+TGG 0.449586 tig0022300:-84449 None:intergenic
CAAAGGTACATCATCATTCA+AGG 0.450037 tig0022300:+84797 Msa1398920:CDS
TTGTTGGAAGTTGCAAATCA+TGG 0.451707 tig0022300:+87207 Msa1398920:CDS
ATCTCAGAGGAGCCTTCTAC+TGG 0.456510 tig0022300:+85704 Msa1398920:CDS
CTATTGTGAGTAACTGGAAT+GGG 0.457459 tig0022300:-84501 None:intergenic
AACTCTTCAAATTGTAAGCC+TGG 0.458250 tig0022300:+84753 Msa1398920:CDS
GGTATTGGTGTTAACCATAC+TGG 0.458605 tig0022300:-85756 None:intergenic
GACAGTGAAGACAGTGCATA+TGG 0.458972 tig0022300:+86281 Msa1398920:CDS
TTGTACAGACATCAGAAGTA+AGG 0.461314 tig0022300:+86150 Msa1398920:intron
CTGAATGTGAGCACAAAAGA+AGG 0.467211 tig0022300:+83045 Msa1398920:five_prime_UTR
GCGGCTGCTAAGATAATTGA+TGG 0.467501 tig0022300:+84588 Msa1398920:CDS
TCATCAGTTTGTAGTGATGA+GGG 0.470024 tig0022300:+84183 Msa1398920:CDS
CGGGTTAGTAGCTAGACTAA+TGG 0.470161 tig0022300:+84224 Msa1398920:CDS
TTTATCGAAATTTGGAAAAG+GGG 0.473251 tig0022300:-83090 None:intergenic
TGCTGATTCATGTTAAGCAC+TGG 0.476068 tig0022300:-85851 None:intergenic
TAAGTCGGAGAAGTCTTCTT+GGG 0.478430 tig0022300:+84392 Msa1398920:CDS
TTCCATCACTTGCTCGGCAG+AGG 0.481154 tig0022300:-85513 None:intergenic
CAAAGCTCTTCCATGTCTAT+GGG 0.483022 tig0022300:+86888 Msa1398920:CDS
TTTGGATTCTTTGCCAACTT+CGG 0.483220 tig0022300:+84248 Msa1398920:CDS
TTTGTAGTGATGAGGGGTGT+GGG 0.483558 tig0022300:+84190 Msa1398920:CDS
TTATAATAAATTGCATACAT+TGG 0.486264 tig0022300:+83144 Msa1398920:five_prime_UTR
GGTTGTCAGCATTCTGATGC+TGG 0.486477 tig0022300:+86218 Msa1398920:CDS
AGAGATACAATGGTTTCAAA+TGG 0.487273 tig0022300:+84927 Msa1398920:CDS
CTCGGCAGAGGATAGTGACT+CGG 0.487665 tig0022300:-85501 None:intergenic
CATGCTTCTCATTATAATGA+GGG 0.487956 tig0022300:+84315 Msa1398920:CDS
TGATCAGGACTTCTTGCCTC+AGG 0.489473 tig0022300:-85338 None:intergenic
TTTCAAATCAAGAATTCTCA+AGG 0.489682 tig0022300:-84667 None:intergenic
TGAATCAGATTCGTTTATCT+GGG 0.491141 tig0022300:-86838 None:intergenic
TGAGCACTGGATATGGGAAA+TGG 0.491726 tig0022300:+87348 Msa1398920:CDS
TGGAACAATCAAACCTTACC+TGG 0.493911 tig0022300:+83524 Msa1398920:CDS
GAGAACCATCAGAGTACATC+AGG 0.496191 tig0022300:+87089 Msa1398920:CDS
GAACATTTCATCTTGTTCCA+TGG 0.496613 tig0022300:-85777 None:intergenic
GTCGACTAGCTTTCTAGACA+TGG 0.496834 tig0022300:-84718 None:intergenic
CTTGGGATGCCATGGAATCA+AGG 0.497669 tig0022300:+84409 Msa1398920:CDS
CATGTCTATGGGGCAATATG+TGG 0.498871 tig0022300:+86899 Msa1398920:CDS
TCTGTTTCTGACTGAGTGGA+AGG 0.499092 tig0022300:+83232 Msa1398920:five_prime_UTR
TCACTCTAAGCTTGAAAGGA+AGG 0.500517 tig0022300:+87133 Msa1398920:CDS
ATAGAACTTTGATTCTGGTA+AGG 0.503159 tig0022300:-83994 None:intergenic
TTGTCTCCAATCAAGAGTAA+TGG 0.505640 tig0022300:+84528 Msa1398920:CDS
AACTGCAGAAGTTTCAAGGC+AGG 0.506503 tig0022300:+83953 Msa1398920:intron
CTATTCCTCGTATATGGCTG+AGG 0.507488 tig0022300:-84615 None:intergenic
AGGAAACAGTACAATTGTAC+AGG 0.508439 tig0022300:-87724 None:intergenic
TGAGGGTGCTCTTCGTTCCA+TGG 0.510083 tig0022300:+84332 Msa1398920:CDS
ATAATGAGAAGCATGAAAGT+TGG 0.511372 tig0022300:-84307 None:intergenic
AGCTCACCGACGTCCGAAGT+TGG 0.511646 tig0022300:-84261 None:intergenic
TTCAGAGCAAAGAGATCTGT+GGG 0.512471 tig0022300:-83027 None:intergenic
GCCTAAAAGGTCAAGCTCTA+GGG 0.513483 tig0022300:+85235 Msa1398920:CDS
TCTGGTTTCCATCACTTGCT+CGG 0.514344 tig0022300:-85519 None:intergenic
AGCCTAAAAGGTCAAGCTCT+AGG 0.514877 tig0022300:+85234 Msa1398920:CDS
GAATATGTACAGAAAATACT+TGG 0.515552 tig0022300:+86987 Msa1398920:CDS
GAAGAATGCAGCTCATGTAA+TGG 0.515627 tig0022300:+84563 Msa1398920:CDS
TTCATCAGTTTGTAGTGATG+AGG 0.517539 tig0022300:+84182 Msa1398920:CDS
CCATCTTATTAATTTGCCAA+TGG 0.518662 tig0022300:-87678 None:intergenic
GACATTGAAGCATTTGAAGA+GGG 0.520513 tig0022300:+87380 Msa1398920:CDS
ATCCTCTGCCGAGCAAGTGA+TGG 0.524003 tig0022300:+85511 Msa1398920:CDS
AAGAGGGGTCAGAGGTTGAA+GGG 0.526933 tig0022300:+87396 Msa1398920:CDS
CCATTGGCAAATTAATAAGA+TGG 0.529264 tig0022300:+87678 Msa1398920:three_prime_UTR
CTGTTTCTGACTGAGTGGAA+GGG 0.530259 tig0022300:+83233 Msa1398920:five_prime_UTR
TCGGACGTCGGTGAGCTCTC+CGG 0.532203 tig0022300:+84267 Msa1398920:CDS
GAAGACTTCTCCGACTTAAG+TGG 0.533144 tig0022300:-84387 None:intergenic
ACTACATAATGGAAGCTACC+AGG 0.534911 tig0022300:-87480 None:intergenic
GGGTGTGGGAGTAAAGCTCC+CGG 0.536026 tig0022300:+84204 Msa1398920:CDS
ATGACATGAGCACTGGATAT+GGG 0.538932 tig0022300:+87342 Msa1398920:CDS
AGATACTTCTTCATCTAGCA+TGG 0.540273 tig0022300:-86808 None:intergenic
GTCTGCAATGACATGAGCAC+TGG 0.540768 tig0022300:+87335 Msa1398920:CDS
AGTATTATACTCCCAATAAG+TGG 0.544810 tig0022300:-87623 None:intergenic
AGTCCGAGTAATATAGTAAG+TGG 0.550827 tig0022300:+84153 Msa1398920:CDS
GTTTGTAGTGATGAGGGGTG+TGG 0.551029 tig0022300:+84189 Msa1398920:CDS
AGGTGTTGTTGTTGTCACTT+GGG 0.551476 tig0022300:-82969 None:intergenic
ATGGGTTTAGCCGACTTTGG+AGG 0.553218 tig0022300:-84483 None:intergenic
GATGGGTGACATCAATTCAA+AGG 0.554306 tig0022300:+87234 Msa1398920:CDS
CATCAGTTTGTAGTGATGAG+GGG 0.554353 tig0022300:+84184 Msa1398920:CDS
AAAACGTGTGCAAACCGTAA+TGG 0.554411 tig0022300:+85047 Msa1398920:CDS
CATTAGTCTAGCTACTAACC+CGG 0.555448 tig0022300:-84223 None:intergenic
AAGTTCTACTGGAGTCAGAA+AGG 0.557721 tig0022300:+85178 Msa1398920:CDS
AGTCAGAAAGGCAACAAACA+AGG 0.557842 tig0022300:+85190 Msa1398920:CDS
CCTATTGTGAGTAACTGGAA+TGG 0.558950 tig0022300:-84502 None:intergenic
TTGCAAATCATGGCCTAGAT+GGG 0.560806 tig0022300:+87217 Msa1398920:CDS
AAGATCACTCTAAGCTTGAA+AGG 0.562316 tig0022300:+87129 Msa1398920:CDS
TCACTATCTATCATATGTGT+CGG 0.564183 tig0022300:-85608 None:intergenic
ATGGCAGAAGAATTTGTCAT+GGG 0.564588 tig0022300:+87023 Msa1398920:CDS
TGTAGCAGCAACAATGAAAG+TGG 0.564981 tig0022300:+86185 Msa1398920:CDS
AGACTGTTTGATTGATGAGA+TGG 0.565226 tig0022300:+87427 Msa1398920:CDS
GAAGTCTTCTTGGGATGCCA+TGG 0.565368 tig0022300:+84401 Msa1398920:CDS
CACATATTGCCCCATAGACA+TGG 0.565694 tig0022300:-86898 None:intergenic
CGTTCAAAGCAGAGATACAA+TGG 0.565930 tig0022300:+84917 Msa1398920:CDS
CTGACAAAGAAACACTGAAG+TGG 0.567776 tig0022300:+87542 Msa1398920:three_prime_UTR
TTGGGATGCCATGGAATCAA+GGG 0.569801 tig0022300:+84410 Msa1398920:CDS
CAATTCTGTTTCTGACTGAG+TGG 0.571548 tig0022300:+83228 Msa1398920:five_prime_UTR
TGAAATGTTGCCTCCAAAGT+CGG 0.572372 tig0022300:+84473 Msa1398920:CDS
ATATGGTAACCGGTAACCAT+TGG 0.573027 tig0022300:+87662 Msa1398920:three_prime_UTR
AGAAGTTTCAAGGCAGGGAA+AGG 0.573539 tig0022300:+83959 Msa1398920:intron
CAAAATAGTATGACTTCCAA+AGG 0.573557 tig0022300:+85098 Msa1398920:CDS
TGCAGCTCATGTAATGGAGG+CGG 0.575246 tig0022300:+84569 Msa1398920:CDS
TCGGGCACACTTCTCTTCAA+GGG 0.577563 tig0022300:-85482 None:intergenic
GGAGCTGAATAGTGAAGCAC+CGG 0.578587 tig0022300:-84286 None:intergenic
TGAAAACAATACTTCTTCAG+AGG 0.580060 tig0022300:-87744 None:intergenic
TATGGCAGAAGAATTTGTCA+TGG 0.581714 tig0022300:+87022 Msa1398920:CDS
TTCAAATCAAGAATTCTCAA+GGG 0.586162 tig0022300:-84666 None:intergenic
TGACATTGAAGCATTTGAAG+AGG 0.587741 tig0022300:+87379 Msa1398920:CDS
CTACATAATGGAAGCTACCA+GGG 0.593223 tig0022300:-87479 None:intergenic
TTAAGTCAAACCAGCTCACA+AGG 0.593311 tig0022300:+84988 Msa1398920:CDS
CTTAAACACACCACTTAAGT+CGG 0.594149 tig0022300:+84377 Msa1398920:CDS
CGCACGACGATAGTCATCCA+TGG 0.595188 tig0022300:-84349 None:intergenic
TCGCCACTTACTATATTACT+CGG 0.596350 tig0022300:-84156 None:intergenic
ACATTGAAGCATTTGAAGAG+GGG 0.596973 tig0022300:+87381 Msa1398920:CDS
AAATTAGAACTCCTCTCACC+AGG 0.597036 tig0022300:-84771 None:intergenic
CACTTGAAAATGAAGTGACA+TGG 0.597864 tig0022300:+86859 Msa1398920:CDS
GTGGCTGTCACACAAATATG+TGG 0.598071 tig0022300:+86918 Msa1398920:CDS
AATATGTGGAACACCAAACA+TGG 0.598654 tig0022300:+86932 Msa1398920:CDS
TAACATGAATCAGCAACTGC+AGG 0.601446 tig0022300:+85859 Msa1398920:CDS
TATTCCTCGTATATGGCTGA+GGG 0.603780 tig0022300:-84614 None:intergenic
TGTACAGACATCAGAAGTAA+GGG 0.605254 tig0022300:+86151 Msa1398920:intron
AGCATTTGAAGAGGGGTCAG+AGG 0.607202 tig0022300:+87388 Msa1398920:CDS
TCGGCAGAGGATAGTGACTC+GGG 0.608484 tig0022300:-85500 None:intergenic
CAGTACAATTGTACAGGGGA+GGG 0.610328 tig0022300:-87718 None:intergenic
GGTGACATCAATTCAAAGGA+AGG 0.612539 tig0022300:+87238 Msa1398920:CDS
TGCAAAACTTGTTCTTTACG+AGG 0.614521 tig0022300:-83207 None:intergenic
ACAGTACAATTGTACAGGGG+AGG 0.617088 tig0022300:-87719 None:intergenic
TCTTTGCCAACTTCGGACGT+CGG 0.617948 tig0022300:+84255 Msa1398920:CDS
ACTGCAGAAGTTTCAAGGCA+GGG 0.617971 tig0022300:+83954 Msa1398920:intron
ACATCAGGTACATCATATTG+TGG 0.620205 tig0022300:+87104 Msa1398920:CDS
ATTCAGAGCAAAGAGATCTG+TGG 0.625950 tig0022300:-83028 None:intergenic
AGAGGGGTCAGAGGTTGAAG+GGG 0.626738 tig0022300:+87397 Msa1398920:CDS
AATATTGTAGTACTGCCCAA+TGG 0.627557 tig0022300:-87596 None:intergenic
TGAATGTGAGCACAAAAGAA+GGG 0.627760 tig0022300:+83046 Msa1398920:five_prime_UTR
AAACCGTAATGGCAATGTGC+TGG 0.628053 tig0022300:+85058 Msa1398920:CDS
CTATCGCTGTTGTTCAAGTG+AGG 0.630068 tig0022300:+85826 Msa1398920:CDS
CAGAGCAAAGAGATCTGTGG+GGG 0.630488 tig0022300:-83025 None:intergenic
TCGACTAGCTTTCTAGACAT+GGG 0.631265 tig0022300:-84717 None:intergenic
AAACTTGGAAGATGTAATGG+TGG 0.636219 tig0022300:+87304 Msa1398920:CDS
AAAGGTACATCATCATTCAA+GGG 0.636259 tig0022300:+84798 Msa1398920:CDS
TTTGGCAGATGAGTTATACA+GGG 0.636557 tig0022300:+87265 Msa1398920:CDS
GGAAACAGTACAATTGTACA+GGG 0.636886 tig0022300:-87723 None:intergenic
ATGTACCTGATGTACTCTGA+TGG 0.636993 tig0022300:-87094 None:intergenic
ACATGAGCTGCATTCTTCGG+CGG 0.637093 tig0022300:-84558 None:intergenic
AAGCTAGTCGACCCAAACAA+TGG 0.638219 tig0022300:+84729 Msa1398920:CDS
AAGTAACTTTCACTGACAGA+AGG 0.642170 tig0022300:-86257 None:intergenic
GAATGCAGCTCATGTAATGG+AGG 0.646804 tig0022300:+84566 Msa1398920:CDS
GTCAGAAAGGCAACAAACAA+GGG 0.647142 tig0022300:+85191 Msa1398920:CDS
TAGGGCAATCAATAACCGAA+AGG 0.649794 tig0022300:+85253 Msa1398920:CDS
TTTCAAAATATCAAGCGACA+TGG 0.652102 tig0022300:+86959 Msa1398920:CDS
TATGGTTAACACCAATACCA+TGG 0.655461 tig0022300:+85760 Msa1398920:CDS
GGTGTGGGAGTAAAGCTCCC+GGG 0.662258 tig0022300:+84205 Msa1398920:CDS
AGAAGTTTATTCTCATGACA+CGG 0.665014 tig0022300:+87815 Msa1398920:three_prime_UTR
TGACAGCAGAGGTGTTCCTG+AGG 0.669852 tig0022300:+85322 Msa1398920:CDS
CAAATTGTAAGCCTGGTGAG+AGG 0.672573 tig0022300:+84760 Msa1398920:CDS
TACATAATGGAAGCTACCAG+GGG 0.677308 tig0022300:-87478 None:intergenic
ATTAGTCTAGCTACTAACCC+GGG 0.683901 tig0022300:-84222 None:intergenic
AAAGCTCTTCCATGTCTATG+GGG 0.687339 tig0022300:+86889 Msa1398920:CDS
CATGGATGACTATCGTCGTG+CGG 0.707839 tig0022300:+84350 Msa1398920:CDS
GAAGCCCTCAGCCATATACG+AGG 0.718262 tig0022300:+84610 Msa1398920:CDS
TCAGTGTACCGTAATCTCAG+AGG 0.719931 tig0022300:+85691 Msa1398920:CDS
AGAGCAAAGAGATCTGTGGG+GGG 0.745744 tig0022300:-83024 None:intergenic
TCAGAGCAAAGAGATCTGTG+GGG 0.751069 tig0022300:-83026 None:intergenic
GAAACAGTACAATTGTACAG+GGG 0.785668 tig0022300:-87722 None:intergenic
ACATAATGGAAGCTACCAGG+GGG 0.795203 tig0022300:-87477 None:intergenic
TCTGAGATTACGGTACACTG+AGG 0.805122 tig0022300:-85689 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATTTATCGAAATT+TGG - tig0022300:83101-83120 None:intergenic 10.0%
!!! ATTTTTGAAAAATGTATAAA+AGG - tig0022300:86416-86435 None:intergenic 10.0%
!!! CAATTTTATATGTATTATAA+GGG - tig0022300:86740-86759 None:intergenic 10.0%
!! TTATAATAAATTGCATACAT+TGG + tig0022300:83144-83163 Msa1398920:five_prime_UTR 15.0%
!! ATAAGCTAAAAACATATTAT+GGG - tig0022300:83727-83746 None:intergenic 15.0%
!! AATAAGCTAAAAACATATTA+TGG - tig0022300:83728-83747 None:intergenic 15.0%
!!! TTTGATTTATTTTTTTGGTT+TGG + tig0022300:84088-84107 Msa1398920:intron 15.0%
!!! ATTGAAATTGTTTTAGATAA+AGG + tig0022300:84113-84132 Msa1398920:intron 15.0%
!!! GTAAAATAATTTTACACTAA+AGG - tig0022300:86513-86532 None:intergenic 15.0%
!!! GCAATTTTATATGTATTATA+AGG - tig0022300:86741-86760 None:intergenic 15.0%
!!! ATTGATATTAAATTGTTTTG+TGG - tig0022300:87780-87799 None:intergenic 15.0%
!! ATTTATCGAAATTTGGAAAA+GGG - tig0022300:83094-83113 None:intergenic 20.0%
!! AATTTATCGAAATTTGGAAA+AGG - tig0022300:83095-83114 None:intergenic 20.0%
!!! TTATTATTTGTTTCGATTTG+CGG + tig0022300:83116-83135 Msa1398920:five_prime_UTR 20.0%
!!! ATATAGGAAAAAAGAAGTAT+TGG + tig0022300:83424-83443 Msa1398920:intron 20.0%
!! TATTCTCATTTAACAAGTAA+AGG + tig0022300:84858-84877 Msa1398920:CDS 20.0%
!!! AAATATTATGTGTTTTGGAT+GGG - tig0022300:85286-85305 None:intergenic 20.0%
!!! TTGAGAAATATTATGTGTTT+TGG - tig0022300:85291-85310 None:intergenic 20.0%
!!! AGTTGTAAAATTGCATTTTA+TGG - tig0022300:85390-85409 None:intergenic 20.0%
!! AACAATTATTCTCAGTAAAT+TGG - tig0022300:86020-86039 None:intergenic 20.0%
!! AAAAATGTATAAAAGGCTAA+AGG - tig0022300:86409-86428 None:intergenic 20.0%
!! CATATTTGTTTATCAATGTT+TGG + tig0022300:86669-86688 Msa1398920:intron 20.0%
!!! TTTGTCAGAATTTTAATCAA+TGG - tig0022300:87530-87549 None:intergenic 20.0%
! TTTATCGAAATTTGGAAAAG+GGG - tig0022300:83093-83112 None:intergenic 25.0%
! AAATTGCATACATTGGATAA+TGG + tig0022300:83151-83170 Msa1398920:five_prime_UTR 25.0%
! AATTGCATACATTGGATAAT+GGG + tig0022300:83152-83171 Msa1398920:five_prime_UTR 25.0%
! AATTCGTTAGATTTCAGATT+TGG + tig0022300:83315-83334 Msa1398920:intron 25.0%
! ATTCGTTAGATTTCAGATTT+GGG + tig0022300:83316-83335 Msa1398920:intron 25.0%
! AACAGTATCAAAATAGTGAA+AGG - tig0022300:83380-83399 None:intergenic 25.0%
!!! TTCACTATTTTGATACTGTT+TGG + tig0022300:83380-83399 Msa1398920:intron 25.0%
!!! GAAAAAAGAAGTATTGGAAA+TGG + tig0022300:83430-83449 Msa1398920:exon 25.0%
!! ATTTAGAATTCCAATCAAAC+AGG - tig0022300:83487-83506 None:intergenic 25.0%
! ATAGCTTACACGAAAATATT+TGG + tig0022300:83785-83804 Msa1398920:intron 25.0%
! TATGTAAGTTTATCCAAACA+TGG + tig0022300:83868-83887 Msa1398920:intron 25.0%
! GAATAATATATGACCATGTT+TGG - tig0022300:83884-83903 None:intergenic 25.0%
!! GTAACAGAAACATTTAGAAT+AGG - tig0022300:83930-83949 None:intergenic 25.0%
!!! GAAATTGTTTTAGATAAAGG+TGG + tig0022300:84116-84135 Msa1398920:intron 25.0%
! TTCAAATCAAGAATTCTCAA+GGG - tig0022300:84669-84688 None:intergenic 25.0%
! TTTCAAATCAAGAATTCTCA+AGG - tig0022300:84670-84689 None:intergenic 25.0%
! TTAACAAGTAAAGGAAAATC+AGG + tig0022300:84867-84886 Msa1398920:CDS 25.0%
!!! TTTTGAAGTTGATTTACCTT+TGG - tig0022300:85117-85136 None:intergenic 25.0%
!!! AATATTATGTGTTTTGGATG+GGG - tig0022300:85285-85304 None:intergenic 25.0%
!!! GAAATATTATGTGTTTTGGA+TGG - tig0022300:85287-85306 None:intergenic 25.0%
! AAATCATTTCTTTCATGATC+AGG - tig0022300:85356-85375 None:intergenic 25.0%
!! AAATGCAATTTTACAACTGA+TGG + tig0022300:85392-85411 Msa1398920:CDS 25.0%
!!! ATAGCAATAATTTTTTGGGA+TGG - tig0022300:85586-85605 None:intergenic 25.0%
!!! GGAGATAGCAATAATTTTTT+GGG - tig0022300:85590-85609 None:intergenic 25.0%
! ATACTCAGTTTCATATGTAA+TGG + tig0022300:85907-85926 Msa1398920:intron 25.0%
!!! ATATTGTTTTGACTATGTGT+TGG - tig0022300:85990-86009 None:intergenic 25.0%
!! TGAGTCTAATTTTCCAAATT+AGG + tig0022300:86064-86083 Msa1398920:intron 25.0%
!!! CTTTGAGATCAAAACAAATA+AGG - tig0022300:86333-86352 None:intergenic 25.0%
! GTAAGAAGTAAAAAGTAAAC+AGG - tig0022300:86366-86385 None:intergenic 25.0%
! AATCACATCTCATATATGTT+AGG + tig0022300:86544-86563 Msa1398920:intron 25.0%
!!! ATTTTGAAATCTACCATGTT+TGG - tig0022300:86948-86967 None:intergenic 25.0%
! GAATATGTACAGAAAATACT+TGG + tig0022300:86987-87006 Msa1398920:CDS 25.0%
! ACTTCATAAACACTACATAA+TGG - tig0022300:87494-87513 None:intergenic 25.0%
! ACAATATTATGACCACTTAT+TGG + tig0022300:87611-87630 Msa1398920:three_prime_UTR 25.0%
! CAATATTATGACCACTTATT+GGG + tig0022300:87612-87631 Msa1398920:three_prime_UTR 25.0%
! TGATAAAGAGCTTAGTTATA+TGG + tig0022300:87645-87664 Msa1398920:three_prime_UTR 25.0%
!!! GATACTGTTTGGTAATGTTT+TGG + tig0022300:83391-83410 Msa1398920:intron 30.0%
!!! TTTTGGTTTGACTGTGATAT+AGG + tig0022300:83408-83427 Msa1398920:intron 30.0%
ATGGAGAAAAAACGTTCAAA+AGG + tig0022300:83449-83468 Msa1398920:CDS 30.0%
ATTTCTTTAGCCTGTTTGAT+TGG + tig0022300:83474-83493 Msa1398920:CDS 30.0%
ATGATTAACATTACCAGGTA+AGG - tig0022300:83540-83559 None:intergenic 30.0%
TCAAATAAGTCAAACCAAAC+AGG - tig0022300:83637-83656 None:intergenic 30.0%
!! TGTTTGGTTTGACTTATTTG+AGG + tig0022300:83636-83655 Msa1398920:intron 30.0%
ATAGAACTTTGATTCTGGTA+AGG - tig0022300:83997-84016 None:intergenic 30.0%
TACCAGAATCAAAGTTCTAT+AGG + tig0022300:83997-84016 Msa1398920:CDS 30.0%
ACCAGAATCAAAGTTCTATA+GGG + tig0022300:83998-84017 Msa1398920:CDS 30.0%
! ATAATGAGAAGCATGAAAGT+TGG - tig0022300:84310-84329 None:intergenic 30.0%
TCATGCTTCTCATTATAATG+AGG + tig0022300:84314-84333 Msa1398920:CDS 30.0%
CATGCTTCTCATTATAATGA+GGG + tig0022300:84315-84334 Msa1398920:CDS 30.0%
AATAACCTATTGTGAGTAAC+TGG - tig0022300:84510-84529 None:intergenic 30.0%
AGAAAACCATTACTCTTGAT+TGG - tig0022300:84537-84556 None:intergenic 30.0%
AAAACTCTATTCCTCGTATA+TGG - tig0022300:84624-84643 None:intergenic 30.0%
! TCTTGATTTGAAAGAGAGAT+TGG + tig0022300:84677-84696 Msa1398920:CDS 30.0%
!! AGGAGTTCTAATTTTGACAA+AGG + tig0022300:84780-84799 Msa1398920:CDS 30.0%
! AAAGGTACATCATCATTCAA+GGG + tig0022300:84798-84817 Msa1398920:CDS 30.0%
AGAGATACAATGGTTTCAAA+TGG + tig0022300:84927-84946 Msa1398920:CDS 30.0%
CAATGGTTTCAAATGGAAAT+AGG + tig0022300:84934-84953 Msa1398920:CDS 30.0%
! TGGTTTGACTTAATCTCATT+CGG - tig0022300:84981-85000 None:intergenic 30.0%
CAAAATAGTATGACTTCCAA+AGG + tig0022300:85098-85117 Msa1398920:CDS 30.0%
!! ATATTATGTGTTTTGGATGG+GGG - tig0022300:85284-85303 None:intergenic 30.0%
!!! CGGAGATAGCAATAATTTTT+TGG - tig0022300:85591-85610 None:intergenic 30.0%
TCACTATCTATCATATGTGT+CGG - tig0022300:85611-85630 None:intergenic 30.0%
GGAAAATTAGACTCAGTAAA+TGG - tig0022300:86059-86078 None:intergenic 30.0%
AATGAAAGTGGAAATGATCT+AGG + tig0022300:86197-86216 Msa1398920:CDS 30.0%
ATGTTTATCTTTCCCTTCAA+TGG + tig0022300:86306-86325 Msa1398920:intron 30.0%
TGTTTATCTTTCCCTTCAAT+GGG + tig0022300:86307-86326 Msa1398920:intron 30.0%
AGATCATCATGTGATTTGAT+TGG + tig0022300:86585-86604 Msa1398920:intron 30.0%
GATCATCATGTGATTTGATT+GGG + tig0022300:86586-86605 Msa1398920:intron 30.0%
! TATTATAAGGGCATATGCTA+CGG - tig0022300:86728-86747 None:intergenic 30.0%
ATCTAGCATGGAAGAATAAA+CGG - tig0022300:86799-86818 None:intergenic 30.0%
TGAATCAGATTCGTTTATCT+GGG - tig0022300:86841-86860 None:intergenic 30.0%
TTTCAAAATATCAAGCGACA+TGG + tig0022300:86959-86978 Msa1398920:CDS 30.0%
! AGATGTGAAAAAGCTTTTGT+TGG + tig0022300:87191-87210 Msa1398920:CDS 30.0%
! AATTCAAAGGAAGGACTTTT+TGG + tig0022300:87247-87266 Msa1398920:CDS 30.0%
!!! GATGATGAGTTTTAGAAACT+TGG + tig0022300:87289-87308 Msa1398920:CDS 30.0%
TAGAAACTTGGAAGATGTAA+TGG + tig0022300:87301-87320 Msa1398920:CDS 30.0%
AGTATTATACTCCCAATAAG+TGG - tig0022300:87626-87645 None:intergenic 30.0%
!! ATTAATTTGCCAATGGTTAC+CGG - tig0022300:87674-87693 None:intergenic 30.0%
!! CCATCTTATTAATTTGCCAA+TGG - tig0022300:87681-87700 None:intergenic 30.0%
CCATTGGCAAATTAATAAGA+TGG + tig0022300:87678-87697 Msa1398920:three_prime_UTR 30.0%
TGAAAACAATACTTCTTCAG+AGG - tig0022300:87747-87766 None:intergenic 30.0%
TGTCATGAGAATAAACTTCT+AGG - tig0022300:87815-87834 None:intergenic 30.0%
TGAATGTGAGCACAAAAGAA+GGG + tig0022300:83046-83065 Msa1398920:five_prime_UTR 35.0%
!! TACATTGGATAATGGGTGTT+TGG + tig0022300:83159-83178 Msa1398920:five_prime_UTR 35.0%
! TGCAAAACTTGTTCTTTACG+AGG - tig0022300:83210-83229 None:intergenic 35.0%
!! AAACCAAACAGGTTCTAGAT+AGG - tig0022300:83626-83645 None:intergenic 35.0%
AAGCTATCTTGTAGAGCTTA+TGG - tig0022300:83752-83771 None:intergenic 35.0%
ACCCTATAGAACTTTGATTC+TGG - tig0022300:84002-84021 None:intergenic 35.0%
AAAAGCAGACAGCAAAAAGT+GGG - tig0022300:84037-84056 None:intergenic 35.0%
AAAAAGCAGACAGCAAAAAG+TGG - tig0022300:84038-84057 None:intergenic 35.0%
TAGATAAAGGTGGATGAGAA+TGG + tig0022300:84126-84145 Msa1398920:intron 35.0%
AGTCCGAGTAATATAGTAAG+TGG + tig0022300:84153-84172 Msa1398920:CDS 35.0%
TCGCCACTTACTATATTACT+CGG - tig0022300:84159-84178 None:intergenic 35.0%
TTCATCAGTTTGTAGTGATG+AGG + tig0022300:84182-84201 Msa1398920:CDS 35.0%
TCATCAGTTTGTAGTGATGA+GGG + tig0022300:84183-84202 Msa1398920:CDS 35.0%
TTTGGATTCTTTGCCAACTT+CGG + tig0022300:84248-84267 Msa1398920:CDS 35.0%
CTTAAACACACCACTTAAGT+CGG + tig0022300:84377-84396 Msa1398920:CDS 35.0%
! TTTGAAATCTCTTGAGTGAC+TGG - tig0022300:84452-84471 None:intergenic 35.0%
CTATTGTGAGTAACTGGAAT+GGG - tig0022300:84504-84523 None:intergenic 35.0%
TTGTCTCCAATCAAGAGTAA+TGG + tig0022300:84528-84547 Msa1398920:CDS 35.0%
ATTACATGAGCTGCATTCTT+CGG - tig0022300:84564-84583 None:intergenic 35.0%
!! ACGAGGAATAGAGTTTTATC+AGG + tig0022300:84627-84646 Msa1398920:CDS 35.0%
!! AGGAATAGAGTTTTATCAGG+CGG + tig0022300:84630-84649 Msa1398920:CDS 35.0%
TTGAAGAGTTGCCATTGTTT+GGG - tig0022300:84743-84762 None:intergenic 35.0%
TTTGAAGAGTTGCCATTGTT+TGG - tig0022300:84744-84763 None:intergenic 35.0%
AACTCTTCAAATTGTAAGCC+TGG + tig0022300:84753-84772 Msa1398920:CDS 35.0%
! CAAAGGTACATCATCATTCA+AGG + tig0022300:84797-84816 Msa1398920:CDS 35.0%
!!! TTGTTTTTGGCTTGCATTGT+AGG - tig0022300:84897-84916 None:intergenic 35.0%
!! TCTGCTTTGAACGTTGTTTT+TGG - tig0022300:84910-84929 None:intergenic 35.0%
TCATCTTCAGAAAGTTCTAC+TGG + tig0022300:85167-85186 Msa1398920:CDS 35.0%
ATGTCAATGTTCAGCCTAAA+AGG + tig0022300:85222-85241 Msa1398920:CDS 35.0%
! AAGAAAAAGTATGACAGCAG+AGG + tig0022300:85311-85330 Msa1398920:CDS 35.0%
ATGGAAACCAGAACTAGATT+TGG + tig0022300:85530-85549 Msa1398920:CDS 35.0%
TATGGTTAACACCAATACCA+TGG + tig0022300:85760-85779 Msa1398920:CDS 35.0%
TTCATCTTGTTCCATGGTAT+TGG - tig0022300:85774-85793 None:intergenic 35.0%
GAACATTTCATCTTGTTCCA+TGG - tig0022300:85780-85799 None:intergenic 35.0%
!! TTTTGACTATGTGTTGGACT+TGG - tig0022300:85984-86003 None:intergenic 35.0%
AAACTGCAGACAACCTAATT+TGG - tig0022300:86080-86099 None:intergenic 35.0%
TTGTACAGACATCAGAAGTA+AGG + tig0022300:86150-86169 Msa1398920:intron 35.0%
TGTACAGACATCAGAAGTAA+GGG + tig0022300:86151-86170 Msa1398920:intron 35.0%
AAGTAACTTTCACTGACAGA+AGG - tig0022300:86260-86279 None:intergenic 35.0%
TTCTGTCAGTGAAAGTTACT+TGG + tig0022300:86259-86278 Msa1398920:CDS 35.0%
AACAAATAAGGCCCATTGAA+GGG - tig0022300:86321-86340 None:intergenic 35.0%
AAACAAATAAGGCCCATTGA+AGG - tig0022300:86322-86341 None:intergenic 35.0%
CTAACAAGTTTGTAACACAC+AGG - tig0022300:86473-86492 None:intergenic 35.0%
CATGATGATCTCACTTTGTT+AGG - tig0022300:86576-86595 None:intergenic 35.0%
CGGAAAAGCAACAAATTTCA+TGG - tig0022300:86708-86727 None:intergenic 35.0%
GAAAACAGGAAGAAACTGAT+CGG - tig0022300:86768-86787 None:intergenic 35.0%
! ATCAGTTTCTTCCTGTTTTC+AGG + tig0022300:86768-86787 Msa1398920:intron 35.0%
AGATACTTCTTCATCTAGCA+TGG - tig0022300:86811-86830 None:intergenic 35.0%
GTGAATCAGATTCGTTTATC+TGG - tig0022300:86842-86861 None:intergenic 35.0%
CACTTGAAAATGAAGTGACA+TGG + tig0022300:86859-86878 Msa1398920:CDS 35.0%
AATATGTGGAACACCAAACA+TGG + tig0022300:86932-86951 Msa1398920:CDS 35.0%
TATGGCAGAAGAATTTGTCA+TGG + tig0022300:87022-87041 Msa1398920:CDS 35.0%
ATGGCAGAAGAATTTGTCAT+GGG + tig0022300:87023-87042 Msa1398920:CDS 35.0%
TCCAACAGATCAAAGAGATT+TGG - tig0022300:87071-87090 None:intergenic 35.0%
ACATCAGGTACATCATATTG+TGG + tig0022300:87104-87123 Msa1398920:CDS 35.0%
AAGATCACTCTAAGCTTGAA+AGG + tig0022300:87129-87148 Msa1398920:CDS 35.0%
!! CTTTTTCACATCTCAACTCT+AGG - tig0022300:87184-87203 None:intergenic 35.0%
TTGTTGGAAGTTGCAAATCA+TGG + tig0022300:87207-87226 Msa1398920:CDS 35.0%
! TTTTGGCAGATGAGTTATAC+AGG + tig0022300:87264-87283 Msa1398920:CDS 35.0%
TTTGGCAGATGAGTTATACA+GGG + tig0022300:87265-87284 Msa1398920:CDS 35.0%
AAACTTGGAAGATGTAATGG+TGG + tig0022300:87304-87323 Msa1398920:CDS 35.0%
! TGACATTGAAGCATTTGAAG+AGG + tig0022300:87379-87398 Msa1398920:CDS 35.0%
! GACATTGAAGCATTTGAAGA+GGG + tig0022300:87380-87399 Msa1398920:CDS 35.0%
! ACATTGAAGCATTTGAAGAG+GGG + tig0022300:87381-87400 Msa1398920:CDS 35.0%
AGACTGTTTGATTGATGAGA+TGG + tig0022300:87427-87446 Msa1398920:CDS 35.0%
AATATTGTAGTACTGCCCAA+TGG - tig0022300:87599-87618 None:intergenic 35.0%
GAGCTTAGTTATATGGTAAC+CGG + tig0022300:87652-87671 Msa1398920:three_prime_UTR 35.0%
GAAACAGTACAATTGTACAG+GGG - tig0022300:87725-87744 None:intergenic 35.0%
GGAAACAGTACAATTGTACA+GGG - tig0022300:87726-87745 None:intergenic 35.0%
AGGAAACAGTACAATTGTAC+AGG - tig0022300:87727-87746 None:intergenic 35.0%
!! AGGTGTTGTTGTTGTCACTT+GGG - tig0022300:82972-82991 None:intergenic 40.0%
!! AAGGTGTTGTTGTTGTCACT+TGG - tig0022300:82973-82992 None:intergenic 40.0%
TTCAGAGCAAAGAGATCTGT+GGG - tig0022300:83030-83049 None:intergenic 40.0%
ATTCAGAGCAAAGAGATCTG+TGG - tig0022300:83031-83050 None:intergenic 40.0%
CTGAATGTGAGCACAAAAGA+AGG + tig0022300:83045-83064 Msa1398920:five_prime_UTR 40.0%
!! CAATTCTGTTTCTGACTGAG+TGG + tig0022300:83228-83247 Msa1398920:five_prime_UTR 40.0%
AATCTCGTAAGAAGCTCGTT+TGG + tig0022300:83504-83523 Msa1398920:CDS 40.0%
TGGAACAATCAAACCTTACC+TGG + tig0022300:83524-83543 Msa1398920:CDS 40.0%
GTGGCATGATTAACATTACC+AGG - tig0022300:83545-83564 None:intergenic 40.0%
CATCAACTGCAGAAGTTTCA+AGG + tig0022300:83949-83968 Msa1398920:intron 40.0%
AAAGCAGACAGCAAAAAGTG+GGG - tig0022300:84036-84055 None:intergenic 40.0%
CATCAGTTTGTAGTGATGAG+GGG + tig0022300:84184-84203 Msa1398920:CDS 40.0%
! ATTAGTCTAGCTACTAACCC+GGG - tig0022300:84225-84244 None:intergenic 40.0%
! CATTAGTCTAGCTACTAACC+CGG - tig0022300:84226-84245 None:intergenic 40.0%
! GGGTTAGTAGCTAGACTAAT+GGG + tig0022300:84225-84244 Msa1398920:CDS 40.0%
!! AGTAGCTAGACTAATGGGTT+TGG + tig0022300:84230-84249 Msa1398920:CDS 40.0%
TTAAGTCGGAGAAGTCTTCT+TGG + tig0022300:84391-84410 Msa1398920:CDS 40.0%
TAAGTCGGAGAAGTCTTCTT+GGG + tig0022300:84392-84411 Msa1398920:CDS 40.0%
TTTATGTGCCCTTGATTCCA+TGG - tig0022300:84421-84440 None:intergenic 40.0%
! GGAATCAAGGGCACATAAAA+TGG + tig0022300:84422-84441 Msa1398920:CDS 40.0%
TGAAATGTTGCCTCCAAAGT+CGG + tig0022300:84473-84492 Msa1398920:CDS 40.0%
CCTATTGTGAGTAACTGGAA+TGG - tig0022300:84505-84524 None:intergenic 40.0%
CCATTCCAGTTACTCACAAT+AGG + tig0022300:84502-84521 Msa1398920:CDS 40.0%
GAAGAATGCAGCTCATGTAA+TGG + tig0022300:84563-84582 Msa1398920:CDS 40.0%
TATTCCTCGTATATGGCTGA+GGG - tig0022300:84617-84636 None:intergenic 40.0%
!! GGAATAGAGTTTTATCAGGC+GGG + tig0022300:84631-84650 Msa1398920:CDS 40.0%
!! TCGACTAGCTTTCTAGACAT+GGG - tig0022300:84720-84739 None:intergenic 40.0%
AAATTAGAACTCCTCTCACC+AGG - tig0022300:84774-84793 None:intergenic 40.0%
CGTTCAAAGCAGAGATACAA+TGG + tig0022300:84917-84936 Msa1398920:CDS 40.0%
TTAAGTCAAACCAGCTCACA+AGG + tig0022300:84988-85007 Msa1398920:CDS 40.0%
! CTCGGTTTGTATTTGGTTTC+TGG - tig0022300:85016-85035 None:intergenic 40.0%
AAAACGTGTGCAAACCGTAA+TGG + tig0022300:85047-85066 Msa1398920:CDS 40.0%
GAAGATGAAACTCGTGTTGT+CGG - tig0022300:85155-85174 None:intergenic 40.0%
AAGTTCTACTGGAGTCAGAA+AGG + tig0022300:85178-85197 Msa1398920:CDS 40.0%
AGTCAGAAAGGCAACAAACA+AGG + tig0022300:85190-85209 Msa1398920:CDS 40.0%
GTCAGAAAGGCAACAAACAA+GGG + tig0022300:85191-85210 Msa1398920:CDS 40.0%
TAGGGCAATCAATAACCGAA+AGG + tig0022300:85253-85272 Msa1398920:CDS 40.0%
! GTCAACACCAAATCTAGTTC+TGG - tig0022300:85540-85559 None:intergenic 40.0%
!! AGATTTGGTGTTGACTCTCT+TGG + tig0022300:85545-85564 Msa1398920:CDS 40.0%
!! GATTTGGTGTTGACTCTCTT+GGG + tig0022300:85546-85565 Msa1398920:CDS 40.0%
TGATGCATTGAGTGTCTTGT+TGG + tig0022300:85628-85647 Msa1398920:CDS 40.0%
CTAGATCTCAAACCAGTAGA+AGG - tig0022300:85719-85738 None:intergenic 40.0%
!! GGTATTGGTGTTAACCATAC+TGG - tig0022300:85759-85778 None:intergenic 40.0%
!! TGCTGATTCATGTTAAGCAC+TGG - tig0022300:85854-85873 None:intergenic 40.0%
TAACATGAATCAGCAACTGC+AGG + tig0022300:85859-85878 Msa1398920:CDS 40.0%
TGTAGCAGCAACAATGAAAG+TGG + tig0022300:86185-86204 Msa1398920:CDS 40.0%
AACACACAGGTGCAACATAA+AGG - tig0022300:86460-86479 None:intergenic 40.0%
TCAAAGCTCTTCCATGTCTA+TGG + tig0022300:86887-86906 Msa1398920:CDS 40.0%
CAAAGCTCTTCCATGTCTAT+GGG + tig0022300:86888-86907 Msa1398920:CDS 40.0%
AAAGCTCTTCCATGTCTATG+GGG + tig0022300:86889-86908 Msa1398920:CDS 40.0%
ACTTGGCAACACAGAGTTTA+TGG + tig0022300:87004-87023 Msa1398920:CDS 40.0%
GCCAAATCTCTTTGATCTGT+TGG + tig0022300:87067-87086 Msa1398920:CDS 40.0%
ATGTACCTGATGTACTCTGA+TGG - tig0022300:87097-87116 None:intergenic 40.0%
TCACTCTAAGCTTGAAAGGA+AGG + tig0022300:87133-87152 Msa1398920:CDS 40.0%
TTGCAAATCATGGCCTAGAT+GGG + tig0022300:87217-87236 Msa1398920:CDS 40.0%
TGAATTGATGTCACCCATCT+AGG - tig0022300:87233-87252 None:intergenic 40.0%
GATGGGTGACATCAATTCAA+AGG + tig0022300:87234-87253 Msa1398920:CDS 40.0%
GGTGACATCAATTCAAAGGA+AGG + tig0022300:87238-87257 Msa1398920:CDS 40.0%
!! AATGACATGAGCACTGGATA+TGG + tig0022300:87341-87360 Msa1398920:CDS 40.0%
!! ATGACATGAGCACTGGATAT+GGG + tig0022300:87342-87361 Msa1398920:CDS 40.0%
! TACATAATGGAAGCTACCAG+GGG - tig0022300:87481-87500 None:intergenic 40.0%
! CTACATAATGGAAGCTACCA+GGG - tig0022300:87482-87501 None:intergenic 40.0%
! ACTACATAATGGAAGCTACC+AGG - tig0022300:87483-87502 None:intergenic 40.0%
CTGACAAAGAAACACTGAAG+TGG + tig0022300:87542-87561 Msa1398920:three_prime_UTR 40.0%
! AGTCCCTCATGTTTTTCCAT+TGG + tig0022300:87580-87599 Msa1398920:three_prime_UTR 40.0%
! GTCCCTCATGTTTTTCCATT+GGG + tig0022300:87581-87600 Msa1398920:three_prime_UTR 40.0%
TGCCCAATGGAAAAACATGA+GGG - tig0022300:87586-87605 None:intergenic 40.0%
ATATGGTAACCGGTAACCAT+TGG + tig0022300:87662-87681 Msa1398920:three_prime_UTR 40.0%
TCAGAGCAAAGAGATCTGTG+GGG - tig0022300:83029-83048 None:intergenic 45.0%
!! TCTGTTTCTGACTGAGTGGA+AGG + tig0022300:83232-83251 Msa1398920:five_prime_UTR 45.0%
!! CTGTTTCTGACTGAGTGGAA+GGG + tig0022300:83233-83252 Msa1398920:five_prime_UTR 45.0%
GTGGAAGGGTTTCTCGTATA+AGG + tig0022300:83247-83266 Msa1398920:five_prime_UTR 45.0%
ATTAGAGAGAGAGAGAGACG+TGG - tig0022300:83564-83583 None:intergenic 45.0%
!! GGTTCTAGATAGGTGGACAA+AGG - tig0022300:83616-83635 None:intergenic 45.0%
!! CCAAACAGGTTCTAGATAGG+TGG - tig0022300:83623-83642 None:intergenic 45.0%
! CCACCTATCTAGAACCTGTT+TGG + tig0022300:83620-83639 Msa1398920:intron 45.0%
AACTGCAGAAGTTTCAAGGC+AGG + tig0022300:83953-83972 Msa1398920:intron 45.0%
ACTGCAGAAGTTTCAAGGCA+GGG + tig0022300:83954-83973 Msa1398920:intron 45.0%
AGAAGTTTCAAGGCAGGGAA+AGG + tig0022300:83959-83978 Msa1398920:intron 45.0%
AAGCAGACAGCAAAAAGTGG+GGG - tig0022300:84035-84054 None:intergenic 45.0%
! TTTGTAGTGATGAGGGGTGT+GGG + tig0022300:84190-84209 Msa1398920:CDS 45.0%
!! CGGGTTAGTAGCTAGACTAA+TGG + tig0022300:84224-84243 Msa1398920:CDS 45.0%
GAAGACTTCTCCGACTTAAG+TGG - tig0022300:84390-84409 None:intergenic 45.0%
TTGGGATGCCATGGAATCAA+GGG + tig0022300:84410-84429 Msa1398920:CDS 45.0%
GAATGCAGCTCATGTAATGG+AGG + tig0022300:84566-84585 Msa1398920:CDS 45.0%
GCGGCTGCTAAGATAATTGA+TGG + tig0022300:84588-84607 Msa1398920:CDS 45.0%
CTATTCCTCGTATATGGCTG+AGG - tig0022300:84618-84637 None:intergenic 45.0%
!! GTCGACTAGCTTTCTAGACA+TGG - tig0022300:84721-84740 None:intergenic 45.0%
AAGCTAGTCGACCCAAACAA+TGG + tig0022300:84729-84748 Msa1398920:CDS 45.0%
CAAATTGTAAGCCTGGTGAG+AGG + tig0022300:84760-84779 Msa1398920:CDS 45.0%
! GGCAATGCTCGGTTTGTATT+TGG - tig0022300:85023-85042 None:intergenic 45.0%
AAACCGTAATGGCAATGTGC+TGG + tig0022300:85058-85077 Msa1398920:CDS 45.0%
GTACCAGCACATTGCCATTA+CGG - tig0022300:85064-85083 None:intergenic 45.0%
!! AACTCGTGTTGTCGGCTTAT+TGG - tig0022300:85147-85166 None:intergenic 45.0%
AGCCTAAAAGGTCAAGCTCT+AGG + tig0022300:85234-85253 Msa1398920:CDS 45.0%
GCCTAAAAGGTCAAGCTCTA+GGG + tig0022300:85235-85254 Msa1398920:CDS 45.0%
! TCTGGTTTCCATCACTTGCT+CGG - tig0022300:85522-85541 None:intergenic 45.0%
! TCTGAGATTACGGTACACTG+AGG - tig0022300:85692-85711 None:intergenic 45.0%
TCAGTGTACCGTAATCTCAG+AGG + tig0022300:85691-85710 Msa1398920:CDS 45.0%
!! AGAAGGCTCCTCTGAGATTA+CGG - tig0022300:85702-85721 None:intergenic 45.0%
! GCAAGACAAAGCATCCAGTA+TGG + tig0022300:85742-85761 Msa1398920:CDS 45.0%
CTATCGCTGTTGTTCAAGTG+AGG + tig0022300:85826-85845 Msa1398920:CDS 45.0%
TAGACTCAGTAAATGGCGTG+TGG - tig0022300:86052-86071 None:intergenic 45.0%
GACAGTGAAGACAGTGCATA+TGG + tig0022300:86281-86300 Msa1398920:CDS 45.0%
CACATATTGCCCCATAGACA+TGG - tig0022300:86901-86920 None:intergenic 45.0%
CATGTCTATGGGGCAATATG+TGG + tig0022300:86899-86918 Msa1398920:CDS 45.0%
GTGGCTGTCACACAAATATG+TGG + tig0022300:86918-86937 Msa1398920:CDS 45.0%
GAGAACCATCAGAGTACATC+AGG + tig0022300:87089-87108 Msa1398920:CDS 45.0%
GTTGCAAATCATGGCCTAGA+TGG + tig0022300:87216-87235 Msa1398920:CDS 45.0%
!! TGAGCACTGGATATGGGAAA+TGG + tig0022300:87348-87367 Msa1398920:CDS 45.0%
TGCTTGTTTAACTAACCCCC+TGG + tig0022300:87462-87481 Msa1398920:exon 45.0%
! ACATAATGGAAGCTACCAGG+GGG - tig0022300:87480-87499 None:intergenic 45.0%
CTGCCCAATGGAAAAACATG+AGG - tig0022300:87587-87606 None:intergenic 45.0%
CAGTACAATTGTACAGGGGA+GGG - tig0022300:87721-87740 None:intergenic 45.0%
ACAGTACAATTGTACAGGGG+AGG - tig0022300:87722-87741 None:intergenic 45.0%
!!! TTTTATTTGATTTATTTTTT+TGG + tig0022300:84083-84102 Msa1398920:intron 5.0%
! AGAGAGAGAGAGAGGTGTGA+AGG - tig0022300:82992-83011 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - tig0022300:82998-83017 None:intergenic 50.0%
AGAGCAAAGAGATCTGTGGG+GGG - tig0022300:83027-83046 None:intergenic 50.0%
CAGAGCAAAGAGATCTGTGG+GGG - tig0022300:83028-83047 None:intergenic 50.0%
AGCAGACAGCAAAAAGTGGG+GGG - tig0022300:84034-84053 None:intergenic 50.0%
GTTTGTAGTGATGAGGGGTG+TGG + tig0022300:84189-84208 Msa1398920:CDS 50.0%
TCTTTGCCAACTTCGGACGT+CGG + tig0022300:84255-84274 Msa1398920:CDS 50.0%
GGAGCTGAATAGTGAAGCAC+CGG - tig0022300:84289-84308 None:intergenic 50.0%
CATGGATGACTATCGTCGTG+CGG + tig0022300:84350-84369 Msa1398920:CDS 50.0%
GAAGTCTTCTTGGGATGCCA+TGG + tig0022300:84401-84420 Msa1398920:CDS 50.0%
CTTGGGATGCCATGGAATCA+AGG + tig0022300:84409-84428 Msa1398920:CDS 50.0%
! ATGGGTTTAGCCGACTTTGG+AGG - tig0022300:84486-84505 None:intergenic 50.0%
! GGAATGGGTTTAGCCGACTT+TGG - tig0022300:84489-84508 None:intergenic 50.0%
ACATGAGCTGCATTCTTCGG+CGG - tig0022300:84561-84580 None:intergenic 50.0%
! TGCAGCTCATGTAATGGAGG+CGG + tig0022300:84569-84588 Msa1398920:CDS 50.0%
! ACGTTTTCTGCGGCAATGCT+CGG - tig0022300:85034-85053 None:intergenic 50.0%
! CGGTTTGCACACGTTTTCTG+CGG - tig0022300:85044-85063 None:intergenic 50.0%
! GCCCTAGAGCTTGACCTTTT+AGG - tig0022300:85239-85258 None:intergenic 50.0%
TGGATGGGGGAAACTCCTTT+CGG - tig0022300:85271-85290 None:intergenic 50.0%
TGATCAGGACTTCTTGCCTC+AGG - tig0022300:85341-85360 None:intergenic 50.0%
TCGGGCACACTTCTCTTCAA+GGG - tig0022300:85485-85504 None:intergenic 50.0%
ATCTCAGAGGAGCCTTCTAC+TGG + tig0022300:85704-85723 Msa1398920:CDS 50.0%
GGTTGTCAGCATTCTGATGC+TGG + tig0022300:86218-86237 Msa1398920:CDS 50.0%
CAGGAAGAAACTGATCGGCA+CGG - tig0022300:86763-86782 None:intergenic 50.0%
!! AAACGGTGCTGCCTGAAAAC+AGG - tig0022300:86782-86801 None:intergenic 50.0%
GTCTGCAATGACATGAGCAC+TGG + tig0022300:87335-87354 Msa1398920:CDS 50.0%
AGCATTTGAAGAGGGGTCAG+AGG + tig0022300:87388-87407 Msa1398920:CDS 50.0%
AAGAGGGGTCAGAGGTTGAA+GGG + tig0022300:87396-87415 Msa1398920:CDS 50.0%
!! TGAGGGTGCTCTTCGTTCCA+TGG + tig0022300:84332-84351 Msa1398920:CDS 55.0%
CGCACGACGATAGTCATCCA+TGG - tig0022300:84352-84371 None:intergenic 55.0%
GAAGCCCTCAGCCATATACG+AGG + tig0022300:84610-84629 Msa1398920:CDS 55.0%
!! GTTTCTGGCTCCTTGTGAGC+TGG - tig0022300:85001-85020 None:intergenic 55.0%
!! TGACAGCAGAGGTGTTCCTG+AGG + tig0022300:85322-85341 Msa1398920:CDS 55.0%
CTCGGGCACACTTCTCTTCA+AGG - tig0022300:85486-85505 None:intergenic 55.0%
TCGGCAGAGGATAGTGACTC+GGG - tig0022300:85503-85522 None:intergenic 55.0%
CTCGGCAGAGGATAGTGACT+CGG - tig0022300:85504-85523 None:intergenic 55.0%
ATCCTCTGCCGAGCAAGTGA+TGG + tig0022300:85511-85530 Msa1398920:CDS 55.0%
TTCCATCACTTGCTCGGCAG+AGG - tig0022300:85516-85535 None:intergenic 55.0%
GAAGAGGGGTCAGAGGTTGA+AGG + tig0022300:87395-87414 Msa1398920:CDS 55.0%
AGAGGGGTCAGAGGTTGAAG+GGG + tig0022300:87397-87416 Msa1398920:CDS 55.0%
GGGTGTGGGAGTAAAGCTCC+CGG + tig0022300:84204-84223 Msa1398920:CDS 60.0%
GGTGTGGGAGTAAAGCTCCC+GGG + tig0022300:84205-84224 Msa1398920:CDS 60.0%
AGCTCACCGACGTCCGAAGT+TGG - tig0022300:84264-84283 None:intergenic 60.0%
TCGGACGTCGGTGAGCTCTC+CGG + tig0022300:84267-84286 Msa1398920:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0022300 gene 82964 87837 82964 ID=Msa1398920;Name=Msa1398920
tig0022300 mRNA 82964 87837 82964 ID=Msa1398920-mRNA-1;Parent=Msa1398920;Name=Msa1398920-mRNA-1;_AED=0.01;_eAED=0.01;_QI=324|1|1|1|0.8|0.83|6|365|911
tig0022300 exon 82964 83268 82964 ID=Msa1398920-mRNA-1:exon:16834;Parent=Msa1398920-mRNA-1
tig0022300 exon 83430 83545 83430 ID=Msa1398920-mRNA-1:exon:16835;Parent=Msa1398920-mRNA-1
tig0022300 exon 83961 84019 83961 ID=Msa1398920-mRNA-1:exon:16836;Parent=Msa1398920-mRNA-1
tig0022300 exon 84129 85880 84129 ID=Msa1398920-mRNA-1:exon:16837;Parent=Msa1398920-mRNA-1
tig0022300 exon 86158 86302 86158 ID=Msa1398920-mRNA-1:exon:16838;Parent=Msa1398920-mRNA-1
tig0022300 exon 86790 87837 86790 ID=Msa1398920-mRNA-1:exon:16839;Parent=Msa1398920-mRNA-1
tig0022300 five_prime_UTR 82964 83268 82964 ID=Msa1398920-mRNA-1:five_prime_utr;Parent=Msa1398920-mRNA-1
tig0022300 five_prime_UTR 83430 83448 83430 ID=Msa1398920-mRNA-1:five_prime_utr;Parent=Msa1398920-mRNA-1
tig0022300 CDS 83449 83545 83449 ID=Msa1398920-mRNA-1:cds;Parent=Msa1398920-mRNA-1
tig0022300 CDS 83961 84019 83961 ID=Msa1398920-mRNA-1:cds;Parent=Msa1398920-mRNA-1
tig0022300 CDS 84129 85880 84129 ID=Msa1398920-mRNA-1:cds;Parent=Msa1398920-mRNA-1
tig0022300 CDS 86158 86302 86158 ID=Msa1398920-mRNA-1:cds;Parent=Msa1398920-mRNA-1
tig0022300 CDS 86790 87472 86790 ID=Msa1398920-mRNA-1:cds;Parent=Msa1398920-mRNA-1
tig0022300 three_prime_UTR 87473 87837 87473 ID=Msa1398920-mRNA-1:three_prime_utr;Parent=Msa1398920-mRNA-1
Gene Sequence

>Msa1398920

ATGGAGAAAAAACGTTCAAAAGGAAATTTCTTTAGCCTGTTTGATTGGAATTCTAAATCTCGTAAGAAGCTCGTTTGGAACAATCAAACCTTACCTGAAGTTTCAAGGCAGGGAAAGGAAAATCTAGAGACCTTACCAGAATCAAAGTTCTATAGGATAAAGGTGGATGAGAATGGAGCAAGTCCGAGTAATATAGTAAGTGGCGATTTTTCATCAGTTTGTAGTGATGAGGGGTGTGGGAGTAAAGCTCCCGGGTTAGTAGCTAGACTAATGGGTTTGGATTCTTTGCCAACTTCGGACGTCGGTGAGCTCTCCGGTGCTTCACTATTCAGCTCCAACTTTCATGCTTCTCATTATAATGAGGGTGCTCTTCGTTCCATGGATGACTATCGTCGTGCGGACTACTTAAACACACCACTTAAGTCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAAATGGAAGACCAGTCACTCAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCGGCTAAACCCATTCCAGTTACTCACAATAGGTTATTGTCTCCAATCAAGAGTAATGGTTTTCTGCCGCCGAAGAATGCAGCTCATGTAATGGAGGCGGCTGCTAAGATAATTGATGGAAGCCCTCAGCCATATACGAGGAATAGAGTTTTATCAGGCGGGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAACATGCACCCATGTCTAGAAAGCTAGTCGACCCAAACAATGGCAACTCTTCAAATTGTAAGCCTGGTGAGAGGAGTTCTAATTTTGACAAAGGTACATCATCATTCAAGGGTTCAAGTTCAAGTTCAAGAGATTCTGAAAAACGTAATTATTCTCATTTAACAAGTAAAGGAAAATCAGGTTCTCCTACAATGCAAGCCAAAAACAACGTTCAAAGCAGAGATACAATGGTTTCAAATGGAAATAGGAAATATATGAAGCAGAAAGAACCGAATGAGATTAAGTCAAACCAGCTCACAAGGAGCCAGAAACCAAATACAAACCGAGCATTGCCGCAGAAAACGTGTGCAAACCGTAATGGCAATGTGCTGGTACAGAATAATCAAAAGCAAAATAGTATGACTTCCAAAGGTAAATCAACTTCAAAAATAGATTCCAATAAGCCGACAACACGAGTTTCATCTTCAGAAAGTTCTACTGGAGTCAGAAAGGCAACAAACAAGGGTGCTACAAATGTCAATGTTCAGCCTAAAAGGTCAAGCTCTAGGGCAATCAATAACCGAAAGGAGTTTCCCCCATCCAAAACACATAATATTTCTCAAAAGAAAAAGTATGACAGCAGAGGTGTTCCTGAGGCAAGAAGTCCTGATCATGAAAGAAATGATTTTGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGAATGCATTTAACATGAATGAAAGCAATGACGTTGTTTCATTTACATTTACGTCTCCCTTGAAGAGAAGTGTGCCCGAGTCACTATCCTCTGCCGAGCAAGTGATGGAAACCAGAACTAGATTTGGTGTTGACTCTCTTGGGCATAATGATAATCTCCATCCCAAAAAATTATTGCTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTCTTGTTGGAGCAAAAGCTGCAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCGTAATCTCAGAGGAGCCTTCTACTGGTTTGAGATCTAGTTTGCAAGACAAAGCATCCAGTATGGTTAACACCAATACCATGGAACAAGATGAAATGTTCATTGATAATTTTAATAGCATGCATAACTATCGCTGTTGTTCAAGTGAGGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATCAGAAGTAAGGGAAGATCATAGCTGTAGCAGCAACAATGAAAGTGGAAATGATCTAGGTTGTCAGCATTCTGATGCTGGTAAAAATTTTCAAGCTCCTTCTGTCAGTGAAAGTTACTTGGACAGTGAAGACAGTGCATATGGCAGCACCGTTTATTCTTCCATGCTAGATGAAGAAGTATCTAATATTTCCCAGATAAACGAATCTGATTCACTTGAAAATGAAGTGACATGGTCAGATCAAAGCTCTTCCATGTCTATGGGGCAATATGTGGCTGTCACACAAATATGTGGAACACCAAACATGGTAGATTTCAAAATATCAAGCGACATGGAGCTTGAATATGTACAGAAAATACTTGGCAACACAGAGTTTATGGCAGAAGAATTTGTCATGGGTCAAACTAATTCAGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAACCATCAGAGTACATCAGGTACATCATATTGTGGAGAAGATCACTCTAAGCTTGAAAGGAAGGTTTTATTTGACTATGTGAGTGAGTGCCTAGAGTTGAGATGTGAAAAAGCTTTTGTTGGAAGTTGCAAATCATGGCCTAGATGGGTGACATCAATTCAAAGGAAGGACTTTTTGGCAGATGAGTTATACAGGGAGATGATGAGTTTTAGAAACTTGGAAGATGTAATGGTGGATGAGCTTGTCTGCAATGACATGAGCACTGGATATGGGAAATGGCTTGACTTTGACATTGAAGCATTTGAAGAGGGGTCAGAGGTTGAAGGGGACATACTAGACTGTTTGATTGATGAGATGGTTTCTGATTTGTTGCTTGTTTAA
Protein sequence

>Msa1398920

MEKKRSKGNFFSLFDWNSKSRKKLVWNNQTLPEVSRQGKENLETLPESKFYRIKVDENGASPSNIVSGDFSSVCSDEGCGSKAPGLVARLMGLDSLPTSDVGELSGASLFSSNFHASHYNEGALRSMDDYRRADYLNTPLKSEKSSWDAMESRAHKMEDQSLKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGFLPPKNAAHVMEAAAKIIDGSPQPYTRNRVLSGGSSSVPLRILDLKERLEAAQHAPMSRKLVDPNNGNSSNCKPGERSSNFDKGTSSFKGSSSSSRDSEKRNYSHLTSKGKSGSPTMQAKNNVQSRDTMVSNGNRKYMKQKEPNEIKSNQLTRSQKPNTNRALPQKTCANRNGNVLVQNNQKQNSMTSKGKSTSKIDSNKPTTRVSSSESSTGVRKATNKGATNVNVQPKRSSSRAINNRKEFPPSKTHNISQKKKYDSRGVPEARSPDHERNDFESKSIKCNFTTDGSIDQNAFNMNESNDVVSFTFTSPLKRSVPESLSSAEQVMETRTRFGVDSLGHNDNLHPKKLLLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTVISEEPSTGLRSSLQDKASSMVNTNTMEQDEMFIDNFNSMHNYRCCSSEDPVLNMNQQLQTSEVREDHSCSSNNESGNDLGCQHSDAGKNFQAPSVSESYLDSEDSAYGSTVYSSMLDEEVSNISQINESDSLENEVTWSDQSSSMSMGQYVAVTQICGTPNMVDFKISSDMELEYVQKILGNTEFMAEEFVMGQTNSVIMPNLFDLLENHQSTSGTSYCGEDHSKLERKVLFDYVSECLELRCEKAFVGSCKSWPRWVTSIQRKDFLADELYREMMSFRNLEDVMVDELVCNDMSTGYGKWLDFDIEAFEEGSEVEGDILDCLIDEMVSDLLLV*